Sed0009966.1 (mRNA) Chayote v1

Overview


Name	Sed0009966.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Reverse transcriptase domain-containing protein
Location	LG04: 8935239 .. 8936720 (+)
Sequence length	1482
RNA-Seq Expression	Sed0009966.1
Synteny	Sed0009966.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAAAGGTAACCTTGAAGCAATTAGGCATCTCCATGGAAGAGCTTTCAGACAGCAAGTTATTAATCCAAGGCTTCAACCAAGGCAGACAACGGGCGATTGGCATGATACGGCTTGAGGTCATCATTGGCGAGCTGAGTGCAGATGCTTTGTTCCATGTTATAGATTGTAAGACAACATATCGACTACTATTGGGACGATCCTGGATTCATGAAAACCGAGTTGTTACTTCCTCGTTGCATCAATGCTTTAAGTTTTACCAAGATGGGGTTAAGAAAGTAGAAGCTGACACAAATCCGTTCTTGGAGGTCGAGTCTCATTTCGCCGATGCAAAATTCTATGCAAAGAACGAGACTGTGGAGAAAACAGTGCCACATGAGGTCTCTGCGATAAAAGAGAGTGAAAAAGCTAAGCTAAAACCAGACACCGACATAAAAAAGAAATGGGTAGAAAAGTCATGCCCAGTAAAGATAGAGGCTTCAACGAGTCTAGTAGCTCCTAAGGCTCCAAAAGATGAGAAACTTCCAACTTCACCCATCTTACGCTATGTCCCTATATCCCGACGAAAAAAGGGTGAAGCGCCTTTCACCGAATGTTCTAAAAAATTGAAAGTAGGTGATATTGAAGTATTGAGGGAAAGTTTCACTACTCCTTTGACAAAGATGAAAAAGCAATGGAGTCAGAGGAGCGAAGAAGATGAGAAGAATGTGGCTTTGCCTGAGAAGCGGACAAAGGATGGATTTGACCCCAATGCGTACAGACTGCTAGCTAAAGCAGGGTATGATTTCACGACACATACCGAGTTCAAACGCTTAAGTATATTTGATGACCAAGCCGAGCTTTCTTCGACGCAAAAGAAGCTGTTGAAGAAAGGTTACGCTCTACCAACGTCAAGAAAAGGACTCGGATATAAGTCACCTGAACCAGTTCGCATAACAAGAAGAGAGAAGACAAAGGTGGAAGATGCCAACCACATAACCATTAAAGAGGTTGAAGAATTGAAGGAAAATAAGAATGTTGGTCATAGGGTACCCGCCTTTAAACGCATTGAACCATCAACATCTCGTGTTTCAGCGTTTCAAAGGTTAGGTACATCAAAAAGAAAGGAGAATAAAATGCCTGCTACCACCAATGAGACACAATTACCTATTTTTGAAAGATTGAATAAAGTCATGGGAGAGGCGAGAACATTCTCAACTCCAGGTGGAGTGCGACCACCCATCTCTCAAAGGTTAAGCAGACAAGTAAAGGGAAAGGAAGATACAAGCTCAACTACAAATTTGAACCGACAATCAGTTTTTCAAAGATTAAACTTAACCACGACAAAAGACCGGGGGCATCCCAAGTCTGTGTTTGACCGAATCTCTCATGAAAGCTTAGGAGAATCACAAAGACAACTTACCAAGCAAGATAAGGAGCAACAAAGATATCTGCAGCGTTGTTCCGTCTCGCATGAAAAGAAAGATGTTTGTTACCATTGA

mRNA sequence

ATGCCAAAGGTAACCTTGAAGCAATTAGGCATCTCCATGGAAGAGCTTTCAGACAGCAAGTTATTAATCCAAGGCTTCAACCAAGGCAGACAACGGGCGATTGGCATGATACGGCTTGAGGTCATCATTGGCGAGCTGAGTGCAGATGCTTTGTTCCATGTTATAGATTGTAAGACAACATATCGACTACTATTGGGACGATCCTGGATTCATGAAAACCGAGTTGTTACTTCCTCGTTGCATCAATGCTTTAAGTTTTACCAAGATGGGGTTAAGAAAGTAGAAGCTGACACAAATCCGTTCTTGGAGGTCGAGTCTCATTTCGCCGATGCAAAATTCTATGCAAAGAACGAGACTGTGGAGAAAACAGTGCCACATGAGGTCTCTGCGATAAAAGAGAGTGAAAAAGCTAAGCTAAAACCAGACACCGACATAAAAAAGAAATGGGTAGAAAAGTCATGCCCAGTAAAGATAGAGGCTTCAACGAGTCTAGTAGCTCCTAAGGCTCCAAAAGATGAGAAACTTCCAACTTCACCCATCTTACGCTATGTCCCTATATCCCGACGAAAAAAGGGTGAAGCGCCTTTCACCGAATGTTCTAAAAAATTGAAAGTAGGTGATATTGAAGTATTGAGGGAAAGTTTCACTACTCCTTTGACAAAGATGAAAAAGCAATGGAGTCAGAGGAGCGAAGAAGATGAGAAGAATGTGGCTTTGCCTGAGAAGCGGACAAAGGATGGATTTGACCCCAATGCGTACAGACTGCTAGCTAAAGCAGGGTATGATTTCACGACACATACCGAGTTCAAACGCTTAAGTATATTTGATGACCAAGCCGAGCTTTCTTCGACGCAAAAGAAGCTGTTGAAGAAAGGTTACGCTCTACCAACGTCAAGAAAAGGACTCGGATATAAGTCACCTGAACCAGTTCGCATAACAAGAAGAGAGAAGACAAAGGTGGAAGATGCCAACCACATAACCATTAAAGAGGTTGAAGAATTGAAGGAAAATAAGAATGTTGGTCATAGGGTACCCGCCTTTAAACGCATTGAACCATCAACATCTCGTGTTTCAGCGTTTCAAAGGTTAGGTACATCAAAAAGAAAGGAGAATAAAATGCCTGCTACCACCAATGAGACACAATTACCTATTTTTGAAAGATTGAATAAAGTCATGGGAGAGGCGAGAACATTCTCAACTCCAGGTGGAGTGCGACCACCCATCTCTCAAAGGTTAAGCAGACAAGTAAAGGGAAAGGAAGATACAAGCTCAACTACAAATTTGAACCGACAATCAGTTTTTCAAAGATTAAACTTAACCACGACAAAAGACCGGGGGCATCCCAAGTCTGTGTTTGACCGAATCTCTCATGAAAGCTTAGGAGAATCACAAAGACAACTTACCAAGCAAGATAAGGAGCAACAAAGATATCTGCAGCGTTGTTCCGTCTCGCATGAAAAGAAAGATGTTTGTTACCATTGA

Coding sequence (CDS)

ATGCCAAAGGTAACCTTGAAGCAATTAGGCATCTCCATGGAAGAGCTTTCAGACAGCAAGTTATTAATCCAAGGCTTCAACCAAGGCAGACAACGGGCGATTGGCATGATACGGCTTGAGGTCATCATTGGCGAGCTGAGTGCAGATGCTTTGTTCCATGTTATAGATTGTAAGACAACATATCGACTACTATTGGGACGATCCTGGATTCATGAAAACCGAGTTGTTACTTCCTCGTTGCATCAATGCTTTAAGTTTTACCAAGATGGGGTTAAGAAAGTAGAAGCTGACACAAATCCGTTCTTGGAGGTCGAGTCTCATTTCGCCGATGCAAAATTCTATGCAAAGAACGAGACTGTGGAGAAAACAGTGCCACATGAGGTCTCTGCGATAAAAGAGAGTGAAAAAGCTAAGCTAAAACCAGACACCGACATAAAAAAGAAATGGGTAGAAAAGTCATGCCCAGTAAAGATAGAGGCTTCAACGAGTCTAGTAGCTCCTAAGGCTCCAAAAGATGAGAAACTTCCAACTTCACCCATCTTACGCTATGTCCCTATATCCCGACGAAAAAAGGGTGAAGCGCCTTTCACCGAATGTTCTAAAAAATTGAAAGTAGGTGATATTGAAGTATTGAGGGAAAGTTTCACTACTCCTTTGACAAAGATGAAAAAGCAATGGAGTCAGAGGAGCGAAGAAGATGAGAAGAATGTGGCTTTGCCTGAGAAGCGGACAAAGGATGGATTTGACCCCAATGCGTACAGACTGCTAGCTAAAGCAGGGTATGATTTCACGACACATACCGAGTTCAAACGCTTAAGTATATTTGATGACCAAGCCGAGCTTTCTTCGACGCAAAAGAAGCTGTTGAAGAAAGGTTACGCTCTACCAACGTCAAGAAAAGGACTCGGATATAAGTCACCTGAACCAGTTCGCATAACAAGAAGAGAGAAGACAAAGGTGGAAGATGCCAACCACATAACCATTAAAGAGGTTGAAGAATTGAAGGAAAATAAGAATGTTGGTCATAGGGTACCCGCCTTTAAACGCATTGAACCATCAACATCTCGTGTTTCAGCGTTTCAAAGGTTAGGTACATCAAAAAGAAAGGAGAATAAAATGCCTGCTACCACCAATGAGACACAATTACCTATTTTTGAAAGATTGAATAAAGTCATGGGAGAGGCGAGAACATTCTCAACTCCAGGTGGAGTGCGACCACCCATCTCTCAAAGGTTAAGCAGACAAGTAAAGGGAAAGGAAGATACAAGCTCAACTACAAATTTGAACCGACAATCAGTTTTTCAAAGATTAAACTTAACCACGACAAAAGACCGGGGGCATCCCAAGTCTGTGTTTGACCGAATCTCTCATGAAAGCTTAGGAGAATCACAAAGACAACTTACCAAGCAAGATAAGGAGCAACAAAGATATCTGCAGCGTTGTTCCGTCTCGCATGAAAAGAAAGATGTTTGTTACCATTGA

Protein sequence

MPKVTLKQLGISMEELSDSKLLIQGFNQGRQRAIGMIRLEVIIGELSADALFHVIDCKTTYRLLLGRSWIHENRVVTSSLHQCFKFYQDGVKKVEADTNPFLEVESHFADAKFYAKNETVEKTVPHEVSAIKESEKAKLKPDTDIKKKWVEKSCPVKIEASTSLVAPKAPKDEKLPTSPILRYVPISRRKKGEAPFTECSKKLKVGDIEVLRESFTTPLTKMKKQWSQRSEEDEKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPTSRKGLGYKSPEPVRITRREKTKVEDANHITIKEVEELKENKNVGHRVPAFKRIEPSTSRVSAFQRLGTSKRKENKMPATTNETQLPIFERLNKVMGEARTFSTPGGVRPPISQRLSRQVKGKEDTSSTTNLNRQSVFQRLNLTTTKDRGHPKSVFDRISHESLGESQRQLTKQDKEQQRYLQRCSVSHEKKDVCYH

Homology

[Close]

BLAST of Sed0009966.1 vs. NCBI nr
Match: KAA0051585.1 (uncharacterized protein E6C27_scaffold174G001280 [Cucumis melo var. makuwa])

HSP 1 Score: 423.3 bits (1087), Expect = 2.8e-114
Identity = 238/435 (54.71%), Postives = 297/435 (68.28%), Query Frame = 0


Query: 1   MPKVTLKQLGISMEELSDSKLLIQGFNQGRQRAIGMIRLEVIIGELSADALFHVIDCKTT 60
           MPK T++QLGI MEELS+SKL+IQGFNQG QR IGMIRLE+IIG+L   ALFHVID +TT
Sbjct: 154 MPKSTMRQLGILMEELSNSKLIIQGFNQGSQRIIGMIRLELIIGDLKDSALFHVIDSRTT 213

Query: 61  YRLLLGRSWIHENRVVTSSLHQCFKFYQDGVKKVEADTNPFLEVESHFADAKFYAKNETV 120
           Y+LLLGR WIH N VVTS+LHQCFKFYQDGVKKVEAD+NPF E ESHFADAKFY KN++ 
Sbjct: 214 YKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVEADSNPFSEAESHFADAKFYLKNDSS 273

Query: 121 EKTVPHEVSAIKESEKAKLKPDTDIKKKWVEKSCPV----KIEASTSLVAPKAPKDEKLP 180
            + V  EV  +   +  +LK    +  K   KS       K EAST+        DEK  
Sbjct: 274 LEVVSVEVLLVNREDNLQLK---SLASKEPHKSIGTFHSGKSEASTNTAKSVILMDEKTS 333

Query: 181 TSPILRYVPISRRKKGEAPFTECSKKLKVGDIEVLRESFTTPLTKMKKQWSQRSEEDEKN 240
             PILRYVP+SRRKKGE+PF E  + LKVG+IEVL+ESFTTPLTK+ K   Q  + D   
Sbjct: 334 NPPILRYVPLSRRKKGESPFVESPQGLKVGEIEVLKESFTTPLTKITK---QEIKIDLTE 393

Query: 241 VALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALP 300
            +LP++RTKDGFDP AY+L+AKAGYDFTTHTEFK L I+ +Q +LSSTQKKLL++G+ +P
Sbjct: 394 ASLPQRRTKDGFDPKAYKLMAKAGYDFTTHTEFKSLKIY-EQPKLSSTQKKLLREGHVIP 453

Query: 301 TSRKGLGYKSPEPVRITRREKTKVEDANHITIKEVEELKENKNVGHRVPAFKRIEPSTSR 360
            SRKGLGYKSPEP+RITR+ K KV D+NHIT+KE + ++E +    R  AF RI P  +R
Sbjct: 454 MSRKGLGYKSPEPIRITRKGKEKVVDSNHITLKEADSMEEKEGDSQRTSAFDRISPHVAR 513

Query: 361 VSAFQRLGTSKRKENKMPATTNETQLPIFERLNKVMGEARTF-STPGGVRPPISQRLSRQ 420
              F++L  ++ +     +T+N  +   F+RL     E +    T    +P   +RLS  
Sbjct: 514 APVFEKLSMTEAERKDHQSTSNLDRRSAFQRLTITFKEEKGICQTSMTTKPSAFERLSIT 573

Query: 421 VKGKEDTSSTTNLNR 431
            K    T     +NR
Sbjct: 574 KKKNAQTPLAPIINR 581

[Close]

BLAST of Sed0009966.1 vs. NCBI nr
Match: XP_031739134.1 (uncharacterized protein LOC116402863 [Cucumis sativus])

HSP 1 Score: 413.7 bits (1062), Expect = 2.2e-111
Identity = 238/466 (51.07%), Postives = 304/466 (65.24%), Query Frame = 0


Query: 1    MPKVTLKQLGISMEELSDSKLLIQGFNQGRQRAIGMIRLEVIIGELSADALFHVIDCKTT 60
            MPK T+ QLGI M+ELS+SKL+IQGFNQG QRAIGMIRLE+IIG+L A ALFHVID +TT
Sbjct: 774  MPKSTMWQLGILMDELSNSKLVIQGFNQGSQRAIGMIRLELIIGDLKASALFHVIDSRTT 833

Query: 61   YRLLLGRSWIHENRVVTSSLHQCFKFYQDGVKKVEADTNPFLEVESHFADAKFYAKNETV 120
            Y+LLLGR WIH N VVTS+LHQCFKFYQDGVKKVEAD+NPF E ESHFADAKFY+KN  +
Sbjct: 834  YKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVEADSNPFSEAESHFADAKFYSKNNNI 893

Query: 121  EKTVPHEVSAIKESEKAKLKP-DTDIKKKWVEKSCPVKIEASTSLVAPKAPKDEKLPTSP 180
             + +P E    K  + ++LK   T    +        K EA TS       KDE    +P
Sbjct: 894  LEVLPAETPLTKGEDNSQLKSLATTEPHESARTFNSGKGEAYTSSTKGMILKDENAANTP 953

Query: 181  ILRYVPISRRKKGEAPFTECSKKLKVGDIEVLRESFTTPLTKMKKQWSQRSEEDEKNVAL 240
            +LRYVP+SRRKKGE+PF E  K LKVGDIE+++ESFTTPLTK+ K   Q  + D     L
Sbjct: 954  VLRYVPLSRRKKGESPFMESPKGLKVGDIEIIKESFTTPLTKIAK---QEVKVDLVEANL 1013

Query: 241  PEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPTSR 300
            P++RTKDGFDP AY+L+AKAGYDFT HTEFK L I  D+ ELSSTQKKLL++G+++P SR
Sbjct: 1014 PQRRTKDGFDPKAYKLMAKAGYDFTAHTEFKSLEI-HDRPELSSTQKKLLREGHSIPVSR 1073

Query: 301  KGLGYKSPEPVRITRREKTKVEDANHITIKEVEELKENKNVGHRVPAFKRIEPSTSRVSA 360
            KGLGYKSPEP+RIT++ K KV D NHITI+E +     +    R+  F RI PS +R   
Sbjct: 1074 KGLGYKSPEPIRITKKGKEKVVDINHITIEEDDNTDVKEGDNQRISVFDRIRPSVARPVV 1133

Query: 361  FQRLGTSKRKENKMPATTNETQLPIFERLNKVMGEARTFSTPGGVRPPISQRLSRQVKGK 420
            F+RL  ++ +  ++ +  N  +  +F RL                  PI +         
Sbjct: 1134 FERLSMTEAERERLQSVPNLERHSVFRRLTTT---------------PIKE--------- 1193

Query: 421  EDTSSTTNLNRQSVFQRLNLTTTKDRGHPKS-----VFDRISHESL 461
            E T       R S F+RL ++  K+   P++     + D+ SH+++
Sbjct: 1194 ESTCHALTTTRPSAFERLGVSKKKNVQAPRAPIFNHLGDKGSHDNI 1211

[Close]

BLAST of Sed0009966.1 vs. NCBI nr
Match: XP_031737372.1 (uncharacterized protein LOC116402244 [Cucumis sativus])

HSP 1 Score: 413.7 bits (1062), Expect = 2.2e-111
Identity = 238/466 (51.07%), Postives = 304/466 (65.24%), Query Frame = 0


Query: 1   MPKVTLKQLGISMEELSDSKLLIQGFNQGRQRAIGMIRLEVIIGELSADALFHVIDCKTT 60
           MPK T+ QLGI M+ELS+SKL+IQGFNQG QRAIGMIRLE+IIG+L A ALFHVID +TT
Sbjct: 149 MPKSTMWQLGILMDELSNSKLVIQGFNQGSQRAIGMIRLELIIGDLKASALFHVIDSRTT 208

Query: 61  YRLLLGRSWIHENRVVTSSLHQCFKFYQDGVKKVEADTNPFLEVESHFADAKFYAKNETV 120
           Y+LLLGR WIH N VVTS+LHQCFKFYQDGVKKVEAD+NPF E ESHFADAKFY+KN  +
Sbjct: 209 YKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVEADSNPFSEAESHFADAKFYSKNNNI 268

Query: 121 EKTVPHEVSAIKESEKAKLKP-DTDIKKKWVEKSCPVKIEASTSLVAPKAPKDEKLPTSP 180
            + +P E    K  + ++LK   T    +        K EA TS       KDE    +P
Sbjct: 269 LEVLPAETPLTKGEDNSQLKSLATTEPHESARTFNSGKGEAYTSSTKGMILKDENAANTP 328

Query: 181 ILRYVPISRRKKGEAPFTECSKKLKVGDIEVLRESFTTPLTKMKKQWSQRSEEDEKNVAL 240
           +LRYVP+SRRKKGE+PF E  K LKVGDIE+++ESFTTPLTK+ K   Q  + D     L
Sbjct: 329 VLRYVPLSRRKKGESPFMESPKGLKVGDIEIIKESFTTPLTKIAK---QEVKVDLVEANL 388

Query: 241 PEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPTSR 300
           P++RTKDGFDP AY+L+AKAGYDFT HTEFK L I  D+ ELSSTQKKLL++G+++P SR
Sbjct: 389 PQRRTKDGFDPKAYKLMAKAGYDFTAHTEFKSLEI-HDRPELSSTQKKLLREGHSIPVSR 448

Query: 301 KGLGYKSPEPVRITRREKTKVEDANHITIKEVEELKENKNVGHRVPAFKRIEPSTSRVSA 360
           KGLGYKSPEP+RIT++ K KV D NHITI+E +     +    R+  F RI PS +R   
Sbjct: 449 KGLGYKSPEPIRITKKGKEKVVDINHITIEEDDNTDVKEGDNQRISVFDRIRPSVARPVV 508

Query: 361 FQRLGTSKRKENKMPATTNETQLPIFERLNKVMGEARTFSTPGGVRPPISQRLSRQVKGK 420
           F+RL  ++ +  ++ +  N  +  +F RL                  PI +         
Sbjct: 509 FERLSMTEAERERLQSVPNLERHSVFRRLTTT---------------PIKE--------- 568

Query: 421 EDTSSTTNLNRQSVFQRLNLTTTKDRGHPKS-----VFDRISHESL 461
           E T       R S F+RL ++  K+   P++     + D+ SH+++
Sbjct: 569 ESTCHALTTTRPSAFERLGVSKKKNVQAPRAPIFNHLGDKGSHDNI 586

[Close]

BLAST of Sed0009966.1 vs. NCBI nr
Match: XP_031740568.1 (uncharacterized protein LOC116403508 [Cucumis sativus])

HSP 1 Score: 413.7 bits (1062), Expect = 2.2e-111
Identity = 238/466 (51.07%), Postives = 304/466 (65.24%), Query Frame = 0


Query: 1    MPKVTLKQLGISMEELSDSKLLIQGFNQGRQRAIGMIRLEVIIGELSADALFHVIDCKTT 60
            MPK T+ QLGI M+ELS+SKL+IQGFNQG QRAIGMIRLE+IIG+L A ALFHVID +TT
Sbjct: 774  MPKSTMWQLGILMDELSNSKLVIQGFNQGSQRAIGMIRLELIIGDLKASALFHVIDSRTT 833

Query: 61   YRLLLGRSWIHENRVVTSSLHQCFKFYQDGVKKVEADTNPFLEVESHFADAKFYAKNETV 120
            Y+LLLGR WIH N VVTS+LHQCFKFYQDGVKKVEAD+NPF E ESHFADAKFY+KN  +
Sbjct: 834  YKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVEADSNPFSEAESHFADAKFYSKNNNI 893

Query: 121  EKTVPHEVSAIKESEKAKLKP-DTDIKKKWVEKSCPVKIEASTSLVAPKAPKDEKLPTSP 180
             + +P E    K  + ++LK   T    +        K EA TS       KDE    +P
Sbjct: 894  LEVLPAETPLTKGEDNSQLKSLATTEPHESARTFNSGKGEAYTSSTKGMILKDENAANTP 953

Query: 181  ILRYVPISRRKKGEAPFTECSKKLKVGDIEVLRESFTTPLTKMKKQWSQRSEEDEKNVAL 240
            +LRYVP+SRRKKGE+PF E  K LKVGDIE+++ESFTTPLTK+ K   Q  + D     L
Sbjct: 954  VLRYVPLSRRKKGESPFMESPKGLKVGDIEIIKESFTTPLTKIAK---QEVKVDLVEANL 1013

Query: 241  PEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPTSR 300
            P++RTKDGFDP AY+L+AKAGYDFT HTEFK L I  D+ ELSSTQKKLL++G+++P SR
Sbjct: 1014 PQRRTKDGFDPKAYKLMAKAGYDFTAHTEFKSLEI-HDRPELSSTQKKLLREGHSIPVSR 1073

Query: 301  KGLGYKSPEPVRITRREKTKVEDANHITIKEVEELKENKNVGHRVPAFKRIEPSTSRVSA 360
            KGLGYKSPEP+RIT++ K KV D NHITI+E +     +    R+  F RI PS +R   
Sbjct: 1074 KGLGYKSPEPIRITKKGKEKVVDINHITIEEDDNTDVKEGDNQRISVFDRIRPSVARPVV 1133

Query: 361  FQRLGTSKRKENKMPATTNETQLPIFERLNKVMGEARTFSTPGGVRPPISQRLSRQVKGK 420
            F+RL  ++ +  ++ +  N  +  +F RL                  PI +         
Sbjct: 1134 FERLSMTEAERERLQSVPNLERHSVFRRLTTT---------------PIKE--------- 1193

Query: 421  EDTSSTTNLNRQSVFQRLNLTTTKDRGHPKS-----VFDRISHESL 461
            E T       R S F+RL ++  K+   P++     + D+ SH+++
Sbjct: 1194 ESTCHALTTTRPSAFERLGVSKKKNVQAPRAPIFNHLGDKGSHDNI 1211

[Close]

BLAST of Sed0009966.1 vs. NCBI nr
Match: XP_031742032.1 (uncharacterized protein LOC116404025 [Cucumis sativus])

HSP 1 Score: 413.3 bits (1061), Expect = 2.9e-111
Identity = 238/466 (51.07%), Postives = 304/466 (65.24%), Query Frame = 0


Query: 1    MPKVTLKQLGISMEELSDSKLLIQGFNQGRQRAIGMIRLEVIIGELSADALFHVIDCKTT 60
            MPK T+ QLGI M+ELS+SKL+IQGFNQG QRAIGMIRLE+IIG+L A ALFHVID +TT
Sbjct: 774  MPKSTMWQLGILMDELSNSKLVIQGFNQGSQRAIGMIRLELIIGDLKASALFHVIDSRTT 833

Query: 61   YRLLLGRSWIHENRVVTSSLHQCFKFYQDGVKKVEADTNPFLEVESHFADAKFYAKNETV 120
            Y+LLLGR WIH N VVTS+LHQCFKFYQDGVKKVEAD+NPF E ESHFADAKFY+KN  +
Sbjct: 834  YKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVEADSNPFSEAESHFADAKFYSKNNNI 893

Query: 121  EKTVPHEVSAIKESEKAKLKP-DTDIKKKWVEKSCPVKIEASTSLVAPKAPKDEKLPTSP 180
             + +P E    K  + ++LK   T    +        K EA TS       KDE    +P
Sbjct: 894  LEVLPAETPLTKGEDNSQLKSLATTEPHESARTFNSGKGEAYTSNTKGMILKDENAANTP 953

Query: 181  ILRYVPISRRKKGEAPFTECSKKLKVGDIEVLRESFTTPLTKMKKQWSQRSEEDEKNVAL 240
            +LRYVP+SRRKKGE+PF E  K LKVGDIE+++ESFTTPLTK+ K   Q  + D     L
Sbjct: 954  VLRYVPLSRRKKGESPFMESPKGLKVGDIEIIKESFTTPLTKIAK---QEVKVDLVEANL 1013

Query: 241  PEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPTSR 300
            P++RTKDGFDP AY+L+AKAGYDFT HTEFK L I  D+ ELSSTQKKLL++G+++P SR
Sbjct: 1014 PQRRTKDGFDPKAYKLMAKAGYDFTAHTEFKSLEI-HDRPELSSTQKKLLREGHSIPVSR 1073

Query: 301  KGLGYKSPEPVRITRREKTKVEDANHITIKEVEELKENKNVGHRVPAFKRIEPSTSRVSA 360
            KGLGYKSPEP+RIT++ K KV D NHITI+E +     +    R+  F RI PS +R   
Sbjct: 1074 KGLGYKSPEPIRITKKGKEKVVDINHITIEEDDNTDVKEGDNQRISVFDRIRPSVARPVV 1133

Query: 361  FQRLGTSKRKENKMPATTNETQLPIFERLNKVMGEARTFSTPGGVRPPISQRLSRQVKGK 420
            F+RL  ++ +  ++ +  N  +  +F RL                  PI +         
Sbjct: 1134 FERLSMTEAERERLQSVPNLERHSVFRRLTTT---------------PIKE--------- 1193

Query: 421  EDTSSTTNLNRQSVFQRLNLTTTKDRGHPKS-----VFDRISHESL 461
            E T       R S F+RL ++  K+   P++     + D+ SH+++
Sbjct: 1194 ESTCHALTTTRPSAFERLGVSKKKNVQAPRAPIFNHLGDKGSHDNI 1211

[Close]

BLAST of Sed0009966.1 vs. ExPASy TrEMBL
Match: A0A5A7UD46 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G001280 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 1.4e-114
Identity = 238/435 (54.71%), Postives = 297/435 (68.28%), Query Frame = 0


Query: 1   MPKVTLKQLGISMEELSDSKLLIQGFNQGRQRAIGMIRLEVIIGELSADALFHVIDCKTT 60
           MPK T++QLGI MEELS+SKL+IQGFNQG QR IGMIRLE+IIG+L   ALFHVID +TT
Sbjct: 154 MPKSTMRQLGILMEELSNSKLIIQGFNQGSQRIIGMIRLELIIGDLKDSALFHVIDSRTT 213

Query: 61  YRLLLGRSWIHENRVVTSSLHQCFKFYQDGVKKVEADTNPFLEVESHFADAKFYAKNETV 120
           Y+LLLGR WIH N VVTS+LHQCFKFYQDGVKKVEAD+NPF E ESHFADAKFY KN++ 
Sbjct: 214 YKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVEADSNPFSEAESHFADAKFYLKNDSS 273

Query: 121 EKTVPHEVSAIKESEKAKLKPDTDIKKKWVEKSCPV----KIEASTSLVAPKAPKDEKLP 180
            + V  EV  +   +  +LK    +  K   KS       K EAST+        DEK  
Sbjct: 274 LEVVSVEVLLVNREDNLQLK---SLASKEPHKSIGTFHSGKSEASTNTAKSVILMDEKTS 333

Query: 181 TSPILRYVPISRRKKGEAPFTECSKKLKVGDIEVLRESFTTPLTKMKKQWSQRSEEDEKN 240
             PILRYVP+SRRKKGE+PF E  + LKVG+IEVL+ESFTTPLTK+ K   Q  + D   
Sbjct: 334 NPPILRYVPLSRRKKGESPFVESPQGLKVGEIEVLKESFTTPLTKITK---QEIKIDLTE 393

Query: 241 VALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALP 300
            +LP++RTKDGFDP AY+L+AKAGYDFTTHTEFK L I+ +Q +LSSTQKKLL++G+ +P
Sbjct: 394 ASLPQRRTKDGFDPKAYKLMAKAGYDFTTHTEFKSLKIY-EQPKLSSTQKKLLREGHVIP 453

Query: 301 TSRKGLGYKSPEPVRITRREKTKVEDANHITIKEVEELKENKNVGHRVPAFKRIEPSTSR 360
            SRKGLGYKSPEP+RITR+ K KV D+NHIT+KE + ++E +    R  AF RI P  +R
Sbjct: 454 MSRKGLGYKSPEPIRITRKGKEKVVDSNHITLKEADSMEEKEGDSQRTSAFDRISPHVAR 513

Query: 361 VSAFQRLGTSKRKENKMPATTNETQLPIFERLNKVMGEARTF-STPGGVRPPISQRLSRQ 420
              F++L  ++ +     +T+N  +   F+RL     E +    T    +P   +RLS  
Sbjct: 514 APVFEKLSMTEAERKDHQSTSNLDRRSAFQRLTITFKEEKGICQTSMTTKPSAFERLSIT 573

Query: 421 VKGKEDTSSTTNLNR 431
            K    T     +NR
Sbjct: 574 KKKNAQTPLAPIINR 581

[Close]

BLAST of Sed0009966.1 vs. ExPASy TrEMBL
Match: A0A5A7UEC9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00760 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 1.7e-109
Identity = 222/377 (58.89%), Postives = 274/377 (72.68%), Query Frame = 0


Query: 1   MPKVTLKQLGISMEELSDSKLLIQGFNQGRQRAIGMIRLEVIIGELSADALFHVIDCKTT 60
           MPK T++Q GI MEEL +SKL+IQGFNQG QR IG+IRLE+IIG+L A ALFHVI+ +TT
Sbjct: 1   MPKSTMRQSGILMEELLNSKLVIQGFNQGSQRVIGIIRLELIIGDLKASALFHVINSRTT 60

Query: 61  YRLLLGRSWIHENRVVTSSLHQCFKFYQDGVKKVEADTNPFLEVESHFADAKFYAKNETV 120
           Y+LLLGR WIH N VVTS+LH CFKFYQDGVKKVE D+NPF E ESHFADAKFY KN++ 
Sbjct: 61  YKLLLGRPWIHGNGVVTSTLHHCFKFYQDGVKKVEVDSNPFSEAESHFADAKFYLKNDSS 120

Query: 121 EKTVPHEVSAIKESEKAKLKPDTDIKKKWVEKSCPV----KIEASTSLVAPKAPKDEKLP 180
            + V  EV  +   +  +LK    +  K   KS       K E STS        DEK  
Sbjct: 121 PEAVSKEVPLVNREDNLQLK---SLASKEPHKSIGTFHSGKSEVSTSTAKSVILMDEKTS 180

Query: 181 TSPILRYVPISRRKKGEAPFTECSKKLKVGDIEVLRESFTTPLTKMKKQWSQRSEEDEKN 240
             PILRYVP+SRRKKGE+PF E  + LKVGDIEVL+ESFTTPLTK+ K   +  + D   
Sbjct: 181 NPPILRYVPLSRRKKGESPFVESPQGLKVGDIEVLKESFTTPLTKINK---KEIKIDLTE 240

Query: 241 VALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALP 300
            +LP++RTKDGFDP AY+L+AKAGYDF THTEFK L I  +Q +LSSTQKKLL++G+A+P
Sbjct: 241 ASLPQRRTKDGFDPKAYKLMAKAGYDFITHTEFKILKI-HEQPKLSSTQKKLLQEGHAIP 300

Query: 301 TSRKGLGYKSPEPVRITRREKTKVEDANHITIKEVEELKENKNVGHRVPAFKRIEPSTSR 360
            SRKGLGYKSPEP+RITR+ K KV D+NHIT+KEV+ ++E ++   R  AF RI P  +R
Sbjct: 301 MSRKGLGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEEKEDDSQRTSAFDRISPHVAR 360

Query: 361 VSAFQRLGT--SKRKEN 372
              F+RL    ++RK++
Sbjct: 361 APVFERLSVIEAERKDH 370

[Close]

BLAST of Sed0009966.1 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 2.5e-108
Identity = 218/441 (49.43%), Postives = 300/441 (68.03%), Query Frame = 0


Query: 1    MPKVTLKQLGISMEELSDSKLLIQGFNQGRQRAIGMIRLEVIIGELSADALFHVIDCKTT 60
            +PK T+ QLGIS+EELS+SKL+IQGFNQG QRAIG +RLEV+IG+L A  +FHVID +TT
Sbjct: 766  LPKSTMNQLGISVEELSNSKLVIQGFNQGAQRAIGTVRLEVVIGDLQASTIFHVIDSRTT 825

Query: 61   YRLLLGRSWIHENRVVTSSLHQCFKFYQDGVKKVEADTNPFLEVESHFADAKFYAKNETV 120
            Y++LLGR WIHEN +VTS+LHQCFKFY+ G+KKV+AD+ PF + ESHFADAKFY K+E V
Sbjct: 826  YKMLLGRPWIHENGIVTSTLHQCFKFYKQGIKKVDADSRPFTKAESHFADAKFYTKSEDV 885

Query: 121  EKTVPHEVSAIK---ESEKAKLKPDTDIKKKWVEKSCPVKIEASTSLVAPKAPK----DE 180
             + +  EV   K   ++E+  +      K   +      ++   T L AP+A K     +
Sbjct: 886  SEIISTEVPVTKGTFKNEQEMITSKKSSKGDALNSQQNGELTTETKLRAPEAEKIATLQK 945

Query: 181  KLPTSPILRYVPISRRKKGEAPFTECSKKLKVGDIEVLRESFTTPLTKMKKQWSQRSEED 240
            ++   P+LRY+P+SRRKKGE+PFTECSK L V + E+L+E+FT PLTK++K  +++ E+ 
Sbjct: 946  EVSNPPVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEAKKIEKK 1005

Query: 241  EKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGY 300
            +    LPE+RT +GFDP AY+L+AKAGYDFTT TE K + IFD++ ELS TQKKL K+GY
Sbjct: 1006 DLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGY 1065

Query: 301  ALPTSRKGLGYKSPEPVRITRREKTKVEDANHITIKEVEELKENKNV-GHRVPAFKRIEP 360
            ++P SR G+GY+S EPVRIT + K KV +  HIT++E ++ +E K V   R   F RI  
Sbjct: 1066 SIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKKVRSQRSSVFDRIAF 1125

Query: 361  STSRVSAFQRLGTSKRKENKMPATTNETQLPIFERLNKVMGEARTFSTPGGVRPPISQRL 420
            S  R S FQR+ TS  K++   +T + T+L  F+RLN    + R+ S     R    +RL
Sbjct: 1126 SAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRKSAFKRL 1185

Query: 421  SRQVKGKEDTSSTTNLNRQSV 434
            S  V   +  +S +  N+ S+
Sbjct: 1186 SVSVTRDQKKASMSVSNKSSL 1206

[Close]

BLAST of Sed0009966.1 vs. ExPASy TrEMBL
Match: A0A5D3BIH8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G001270 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 2.5e-108
Identity = 218/441 (49.43%), Postives = 300/441 (68.03%), Query Frame = 0


Query: 1    MPKVTLKQLGISMEELSDSKLLIQGFNQGRQRAIGMIRLEVIIGELSADALFHVIDCKTT 60
            +PK T+ QLGIS+EELS+SKL+IQGFNQG QRAIG +RLEV+IG+L A  +FHVID +TT
Sbjct: 744  LPKSTMNQLGISVEELSNSKLVIQGFNQGAQRAIGTVRLEVVIGDLQASTIFHVIDSRTT 803

Query: 61   YRLLLGRSWIHENRVVTSSLHQCFKFYQDGVKKVEADTNPFLEVESHFADAKFYAKNETV 120
            Y++LLGR WIHEN +VTS+LHQCFKFY+ G+KKV+AD+ PF + ESHFADAKFY K+E V
Sbjct: 804  YKMLLGRPWIHENGIVTSTLHQCFKFYKQGIKKVDADSRPFTKAESHFADAKFYTKSEDV 863

Query: 121  EKTVPHEVSAIK---ESEKAKLKPDTDIKKKWVEKSCPVKIEASTSLVAPKAPK----DE 180
             + +  EV   K   ++E+  +      K   +      ++   T L AP+A K     +
Sbjct: 864  SEIISTEVPVTKGTFKNEQEMITSKKSSKGDALNSQQNGELTTETKLRAPEAEKIATLQK 923

Query: 181  KLPTSPILRYVPISRRKKGEAPFTECSKKLKVGDIEVLRESFTTPLTKMKKQWSQRSEED 240
            ++   P+LRY+P+SRRKKGE+PFTECSK L V + E+L+E+FT PLTK++K  +++ E+ 
Sbjct: 924  EVSNPPVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEAKKIEKK 983

Query: 241  EKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGY 300
            +    LPE+RT +GFDP AY+L+AKAGYDFTT TE K + IFD++ ELS TQKKL K+GY
Sbjct: 984  DLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGY 1043

Query: 301  ALPTSRKGLGYKSPEPVRITRREKTKVEDANHITIKEVEELKENKNV-GHRVPAFKRIEP 360
            ++P SR G+GY+S EPVRIT + K KV +  HIT++E ++ +E K V   R   F RI  
Sbjct: 1044 SIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKKVRSQRSSVFDRIAF 1103

Query: 361  STSRVSAFQRLGTSKRKENKMPATTNETQLPIFERLNKVMGEARTFSTPGGVRPPISQRL 420
            S  R S FQR+ TS  K++   +T + T+L  F+RLN    + R+ S     R    +RL
Sbjct: 1104 SAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRKSAFKRL 1163

Query: 421  SRQVKGKEDTSSTTNLNRQSV 434
            S  V   +  +S +  N+ S+
Sbjct: 1164 SVSVTRDQKKASMSVSNKSSL 1184

[Close]

BLAST of Sed0009966.1 vs. ExPASy TrEMBL
Match: A0A5D3D1E5 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G004020 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 2.5e-108
Identity = 218/441 (49.43%), Postives = 300/441 (68.03%), Query Frame = 0


Query: 1    MPKVTLKQLGISMEELSDSKLLIQGFNQGRQRAIGMIRLEVIIGELSADALFHVIDCKTT 60
            +PK T+ QLGIS+EELS+SKL+IQGFNQG QRAIG +RLEV+IG+L A  +FHVID +TT
Sbjct: 696  LPKSTMNQLGISVEELSNSKLVIQGFNQGAQRAIGTVRLEVVIGDLQASTIFHVIDSRTT 755

Query: 61   YRLLLGRSWIHENRVVTSSLHQCFKFYQDGVKKVEADTNPFLEVESHFADAKFYAKNETV 120
            Y++LLGR WIHEN +VTS+LHQCFKFY+ G+KKV+AD+ PF + ESHFADAKFY K+E V
Sbjct: 756  YKMLLGRPWIHENGIVTSTLHQCFKFYKQGIKKVDADSRPFTKAESHFADAKFYTKSEDV 815

Query: 121  EKTVPHEVSAIK---ESEKAKLKPDTDIKKKWVEKSCPVKIEASTSLVAPKAPK----DE 180
             + +  EV   K   ++E+  +      K   +      ++   T L AP+A K     +
Sbjct: 816  SEIISTEVPVTKGTFKNEQEMITSKKSSKGDALNSQQNGELTTETKLRAPEAEKIATLQK 875

Query: 181  KLPTSPILRYVPISRRKKGEAPFTECSKKLKVGDIEVLRESFTTPLTKMKKQWSQRSEED 240
            ++   P+LRY+P+SRRKKGE+PFTECSK L V + E+L+E+FT PLTK++K  +++ E+ 
Sbjct: 876  EVSNPPVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEAKKIEKK 935

Query: 241  EKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGY 300
            +    LPE+RT +GFDP AY+L+AKAGYDFTT TE K + IFD++ ELS TQKKL K+GY
Sbjct: 936  DLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGY 995

Query: 301  ALPTSRKGLGYKSPEPVRITRREKTKVEDANHITIKEVEELKENKNV-GHRVPAFKRIEP 360
            ++P SR G+GY+S EPVRIT + K KV +  HIT++E ++ +E K V   R   F RI  
Sbjct: 996  SIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKKVRSQRSSVFDRIAF 1055

Query: 361  STSRVSAFQRLGTSKRKENKMPATTNETQLPIFERLNKVMGEARTFSTPGGVRPPISQRL 420
            S  R S FQR+ TS  K++   +T + T+L  F+RLN    + R+ S     R    +RL
Sbjct: 1056 SAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRKSAFKRL 1115

Query: 421  SRQVKGKEDTSSTTNLNRQSV 434
            S  V   +  +S +  N+ S+
Sbjct: 1116 SVSVTRDQKKASMSVSNKSSL 1136

The following BLAST results are available for this feature:

BLAST of Sed0009966.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051585.1	2.8e-114	54.71	uncharacterized protein E6C27_scaffold174G001280 [Cucumis melo var. makuwa]	[more]
XP_031739134.1	2.2e-111	51.07	uncharacterized protein LOC116402863 [Cucumis sativus]	[more]
XP_031737372.1	2.2e-111	51.07	uncharacterized protein LOC116402244 [Cucumis sativus]	[more]
XP_031740568.1	2.2e-111	51.07	uncharacterized protein LOC116403508 [Cucumis sativus]	[more]
XP_031742032.1	2.9e-111	51.07	uncharacterized protein LOC116404025 [Cucumis sativus]	[more]

BLAST of Sed0009966.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0009966.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UD46	1.4e-114	54.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UEC9	1.7e-109	58.89	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TZU9	2.5e-108	49.43	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940...	[more]
A0A5D3BIH8	2.5e-108	49.43	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3D1E5	2.5e-108	49.43	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00402...	[more]

BLAST of Sed0009966.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 397..427
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..244

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0009966	Sed0009966	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009966.1-exon	Sed0009966.1-exon-LG04:8935239..8936720	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009966.1-cds	Sed0009966.1-cds-LG04:8935239..8936720	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0009966.1	Sed0009966.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process