Sed0009753.2 (mRNA) Chayote v1

Overview


Name	Sed0009753.2
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	zinc finger CCCH domain-containing protein 38-like isoform X2
Location	LG10: 3263222 .. 3270245 (+)
Sequence length	4315
RNA-Seq Expression	Sed0009753.2
Synteny	Sed0009753.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTATCATCAAGATGCGGTCTTGGCGGAGGAAAATGTGCAGTAGAAAGTGCAGACCATTCATCTTTGTCATATTCTATTAGATTGCGCCTTAAGCACAAAGTCCAAGAGTTGCCTTGTGTATAAGTATTCCACAAATCATGTATTGATGCCCGTTTCTTTTGGGAAAGAGCATATAGTTTGGGGAAGATCACATAGAAGGGAGCATATAGTTTGGGGAAGATCACATGGGAAGAAGCTTAAATGAAGTGTGGTTTGGTTGCCACCACCTAGTGAGTTGGAAGAGGCTTATCTGCTTTTTATTTGGGTGGAACATGCATATGGTTGTTAGGCTTCTTGGGAGAGTTGAGCATTCTAATGTAAAGATTATCTAAAACAAATAGTATTAGGTGTCTTCTAAGGTCAAAGCTTGACACTTGTTGTGAAACGTCTTGTTCGTTAATACACCATTCTTGGTCCACTAGGATGTCTGTTGGTCTCTTAACCCTTCCAAGGCTTCACGTGTCTCTCCTTTCGTTGTTTGGTTGATCTCTCCCCTTTATCTTCAAGGCACTCTGTCTTTGGGGCTTTATGAAGGGTGAAAATTCTAAAGAAAGTTAAGTTCTTTATTTGGCAGGTTCTCCATGACAGAATTAACACTTTAGATAGGTTGATGTAGAAAGTCCCCATGGCAGATTCTCCGCGACAGAATTAATACTTTTGACGTTGCTCCTACCAGCTTCTTTTGATTTGAACTTTGAAGTACATCTAGCATTTTTTGAAGTATGGTTGATAGGTAGGGTGTAAGATCCCTAATTCTAATGAATATTCTAGAAAGGGCAAATTGGAAGTTCTCCAGTAATTAGTCAGAGGGAGAATGGTAAGGGAACCTCTTGTGGGTATAAATAATGTAAGAAGATGTTTAGAGAGGGAGGTCTTATTTTGGGTTAGGTCATAGGACTTGGAGGAGAGGTTTTGGAGCTCTCAAATTCACCGGTTAGCTTGTCGTTTATCATTTTCAGGTTCGTCTTGTTATTTCTATTTCATGTTTGTTAATGAAGTCAGATCTGAATAGAGAGCGATTTTTAGTAAATTCAGCAGTAGATCTATTCTATTTTGCATTTGGTATTGTTCTGTAAATTTCTTGCGAGATCTGGATATCAGTACCCTTACATATGGCTGGATTATTTGTGGCAAGAGGTTTAGTTATTCGTAACATCATAACTGTGGGAAGGATAGGAAGCTTCTCCATTAATATATTAACTGATTACAAGTGATAAAATTCATGTTAAAGCCAGAAGCTTGGGTAGTGAAATGTTGTTTTTTCTTATTCTGACTAGACAATTTGATTAGGTACCGAATTTTTCTTCTATCTGTAATTGGAGGAACCCCTCTCGTTCAATGTTACGGTCTCAGATAATTCCTAACGAGGTCATAGAAAACATCTGAATGAGTTTATGTATTCAATAGGGTATAATGTGGTCTAGTCTATTCCTTGCTGAATATCAACCAAAGTGGGATATAAGAGAAGAATCTCATTTTGAAACTGACAGCTGGCTTGGGAAAGAATCACGACCTGGTTGGAGTCGTTGGACTTTTTCTGAACTTGCAAGTGATGATGGTTCCAAGTGGTCTGGCATGGAGACCACCAACACCGTTTCAAATTCTAAGCAAGATTAGGGATTGCTGTCAAAGGAACCTTTATCTGGAACCAGAGATTCACATGAGGCGTTTATTACACTAGTGAAAACTATAATAAAAATATGCAAAACACTGCTGAATTGGATGCTGTCAAAAGCTACGACACAAGAACGTCTCCTGGTTTAGATGAATGGAGTGGGACATAACTCTAAGCCGTTGGAGAAATGATTGGGGCAGGTCAGCGAGGTTGGATACCTTGGTACTAGCTGAGCTTATAATAACTTCCTCACCACAAAAGTATTCATTCTAAAATTTTGTCACTGAAGTTTCATTTTTTGGCATTTTTGCTTGGAACACAATATCAAATACTCAAACCTCTTAACTTCGATTCTGAATTTGCATGTTTGTGTGGGACTCTATGTTGTTCACTTGAATGAGCCTATCTGGATTGATGTATTTCTATTGGGATTGGTTAGTTCTTGTCCAATATCAATGTCATTCTTGATTAAGGTTGCTTGTTTTTATTGTGTTTCAGGGGTAGGAGTAGAAGCCGCAGTTGGAGTAGAAGCCGGAGTAGGAGTAGAAGTCCTCCTCATAGTAGTAAGCGGGACTCAGGATTTCATGATAGAAACAGAAACAGGTCACGTGTTTCAACTCACTTGTGCAAAGATTTTGCTTCTGGCAGATGCAAACGAGGTAGTAATTGTCAATTCCTTCACCCGGAAAGTCAAAATCTGGATGATAGCTGGGAAAATAGGAACAGGAAGGGGGGTCGATCAACTTCTCATGATTCTAGGGACTATTTGAGGAGTGGAATAACACGAGGTTCTCCAAATGATAATAGTAGAGACAGGGACAATGATAGGAGTAAAGCATATTTCTCACGTGGTGAGCGTGAACCTTGCAGTGACAATCTTGTTATATGCAAATTTTTTGCTGCTGGAAATTGTCGAAATAGAAACAATTGCAAATTTTCTCACCATATCCAGTCACGTGCAAGTCCAGATAGGAAGTCAAGTACCGATAGATGGGAACAGGTTCAATGTTCAGATGGTAGGGAACGGTTGTGGGATGGCTCAAAACCAAGTGAATTGGCTAGTGGTTCAGATTTCACTCAGTTGAGAGAGGACAAAAATGAACAAATTGCTAGTCAAGAATCAAAACATAAATGGCCCTCAGAACAAAAATGGAGTCATGGTTTGGATAATGAGAGCAAAATTCAGTGGGATCAAACTGCCAGTATCAAGGCAGTTCAGAGCAACAAGAATGATACCATTCTGAGCAAGGCAGATGATGCTGGTAGTTGCATGGGCCCTTCTGATCCTAAAGGTCACAGAAAGTTGCCAAGTGATGATATGGAGATGTCACCCGATTGGCATTACCCCGTGCAACCATCCAATCATGTAAGGAAAGGAGATTGCAAAATTATGCAGGATTCTGGCTCTCAAACATCCATGGTGTTAGCGACTCTCGACCATGCGAAAGATAAAGAGGCTTTGGCGAAGAAGCAAGACATTGTCATAGAGCCTATAACAGTTGATAACACTAATTCTCGGAAAAACCATAATTTAACAAAAGATGCTACTATGGCATCCACATTCAATGATAAGATTACAATTGACAATACTATTGCTTCACCTGCTGGATGTAATCCTTCTGGTAACATTGTCATTGGACAAATAACGGCATATCAAACCGACCATCCAGGTGGAACTGTAATGAATCCAGTTGCAGATGGAAATATCAGAGCCAAACCTCAAGGGGAGGATGGAAGCATGCCGAGAAATAATCCTGGAACAACCAACGCTCCAAACATAGTAACCAGCGAACAAATTACCCAATTAACTAACCTTTCAGCTTCTCTTGCTCAATATTTTGGAAATGTGCAGCCATTGCCTCAATTTCAGGCCTCTCTTAATACACATAATGTGTCAGAAATACCTTCCTTCCCTTCTGCTGATGCACCAATTGGTGCATTGGGGGCATCGATGAAAACAGGTTCTGTAATTGAATGCTCGAAGCAACATGATTCTACTATCTCCGACAGCTTAGAGCTAAAGAAGCTTGAATCCACTAAAACACCGTCAGACTGTTTACTGAATTCCCCCGGACAGAAAAGTAGTACAGATGTGAAGGATGGAGTACAGATACCAAATTTTCCTCCATCATCTGAACCTTGTAACAAGAGTGATGTTATAAATGATGGGAAACCAGCAGCTGACAGTGAGGCTATCAAAGAGAAAAATGGGGATGGGGATAGTAAGAACAAGACTGAACTGGTGGCGACTGAGGATTCTCGAGAGAATGATACTGCAGAAAATGTGAATGGAAATGATGGGGTCCATGACAAGAATAAAGGTAAGGATGCTAAGGAAATTCGTGCTTTTAAATTTGCTCTTGTGGAGTTTGTCAAGGAACTTTTAAAACCTACTTGGAAGGAAGGTCATATCAGCAAAGATGTTTATAAAACCATAGTCAAGAAAGTGGTGGACAAAGTGACAGGTACCTTGCAGGAGGGTCACATTCCTCAAACGCAGGAGAAAATTGATCAATATCTTTCATTTTCAAAACCAAAGCTCACCAAACTTGTCCAGGTAACTACAAAAAAAATTTCAATTGATCTTCCTATAATTTCTTTATGCTATTTTACTGGACAATTGACAATTTTGAAGTTCTCGAAATGTTCAAGTCAGGATATGATAACTATAAACCATCATCAGTTGGGTTCAATCCATGGTGGCACCTACTTTGACTATTTTGTTTGTTTTTTTTTACTTCAATTAAGTTTTTTAAATGTTACATGGCATGATGACCGTAAACCATCGTGGGTTTGCTTAGTAGTCAAGAGGGTCTTAGAGAACCAAAAGTTTACAAGTTTAGTTTGTCAAGGGGTGACGCAATGATTGAAGACTTAGGCTTTGAAGGTGTGCTTTCCTCAAAATCTCAGGTTCAAAACTCACATGTGACACCACTCACGGTAATCCTTAAAAAGATAGCTATAAGTTGATTTTCTTTTTTTTTAAAAAAACAAAATCCACATCAACATAAACATAAAAAATGGAGACAAATATTATATTTTTTAAGCAATAGTTGGAAATAATATGGCCACTGTTTTAATTGTTACATTAGTGTATGTATTATCTTCTCTCTTTGCCCTTGGATGGGTGGCCAATGAGTATAGGAGTGCCACTATCTCCTCTCAAATTATCCAGTTTATGTGCTTATCTCTCTTTTAGACTTAGTAGAAACAACTGCTGCATTCATTTGAATACAATTCTGTTCTTGTACAATATTAGCCATTAGGTTATGCACATACTCAAGGCTCAACTTGTATTTCTTAGTTAGTGAGCGTTAGTGCATTCACTTGGGGAATACGTACATATTATGTTTTGGTGTTTCTTACGTTTATTTTACATTCACACGATTGCTGCAAGTCAATTATTAAACGTGAATATGCATATATAATATTCCCATAATTATAGATGAATGAAACGAATCTTAGTTCTTACTGTTCCTGATCCATTCCAATATACATACAGTACACATTTGGTTAGATAAATGATTCACATTTCATTAATTCACAATTTGACTGTTTTAATTTTTGTAAGACTGAAGTAAATGAAGTTTGAGCAATAAAGACTGTTCTTCTAACCCTTAATAGAGAGAACTTCTAAATCTTCTATTAAAGCACTGCTACAATCAAACAACTCTGCGGCATCAATGTATGCCAATGAACCAGGAGGTCATGGACTAGATTCTCCACTCCCAATTGTTTTTGAACTCAAAAAAGAAAAGTTGGTAACAGTGCTTCCTCTATCACAGTTTTCCAAGCTTTTCTTATTGGAAGTGGACATCCCTGGCTAAGGATTAGAGGAATATTATCTTTTGATAGACTATCTATTGAAGATCACAATGAGAAACTTAGTGCGGCATGCCAAAAAGTTGAATAACCAACGATGCTTACTTGGCTTTAAAATGTTGGGAGCATTATTTGCTTGGCTGGGCATTTATCCTTCTTCTATCAATTATTAGAGGTTTAAGGCACTTAAAATTCTCAAAATAGTATTTACAGATGCATCCAAGGTATCAAAATAATATTAACAGATGCAGCCAAGTGGTCAAAACACTCCTGAAAAAAAAAAAAAAAAACCAAGATGCCTTTCATTCATCTTAAAGTTTGGTTTCCTCAATAAGACATTTGCACTAGAGTTTCAAAAGAGTTGCAAACCCTTGGTATGGCTCACCTGTGAAAGACTTTCTGAGAATAAAAACTGAGAAGGGTCTAGCAGTTGTCCCAAGAAAATAGCAAAAGTGTGCACATGCCGAAGAAAATTGAAAAGTTGGTTGAATACATATGCCGATTACGGTCATCATTGATTCCGTGTGTCGGGAGACTTAACCATTGAGACTGTCATGATTGTCAGGGGTAGTTCGTGTTTATCCTCTATCCTGCCAAAATGACCTCTTATAACCTCTTTCTTATGGATTCAGTTGGTTTATGGTGAACATTCGGTCTCACTATCTTGGATGTGCCATCTTTCAAGATGGTAGCTAAATCTTCTTAAAAGAAAGATCAAGCATTTCACTAGAGCTCTCTTAGGCTTTTAATTGTAGTGGTCAAGGAGGGTTTTGAGATCCAAGAGATTATGAATTCAATCCATGTTGCCCATCTACCTAGGAAATAATTTGTTATGCGTTTCCTTGATACCTAAATATCGTAAGGTCGTACGGTATGTCCCCTGAGCATACTTGAGGTGCAGATAAGCTAGTCCAAAGAAACTACTTCCATGTTTGACCTGCAGGCACATCCTTTCATAAACAGCTCTTTTGTTGTGTTATGTGTTCATTCTTTGTTAAGTGAAGTATTTTATCCAGTCTTTTGCTGATCTTGTCAAAATACAGTACTATATTTTTCTACCTCTCTATCTAGTTGAGACTAATAACTTTATGTATAAATATGTTTTTTTTTTTTTTGAGATTTTATGTATAAATATGTTTCTCGTCTCTTTGTCAGGCATACGTTGACAGAGTTCAGAAGACGACGTGAGAATACGAGGTCGTGTCGAAGTACATTCTTAAGTATTTTTTGAGGAAAAAGAAATCCCATGTAATAATTTGTTAGAATGGTGCAGCCTTCTGAATGATGTTTATCATGTCTTTTACAGATGTAGTGTAAGCTATCTTCTATTAGCAGTCTTAGGGGGTACACCCTTCATCAGCCCTCTCTGCCAATTAGATATATGGAAATTGTTGCTCTTGGTTTGTGCATTCTTCTTTTCTTTTTTGTTGCTTTTTTTTTCGAGGACCAACAATTCTCGACCAACATTTAGAGGTGGGAAGATTTGAACCTATGCTCTTGATTATTAGGGTTGTATAAGATATTGTTGGAAATCTGATCTTGTCGAC

mRNA sequence

GCTATCATCAAGATGCGGTCTTGGCGGAGGAAAATGTGCAGTAGAAAGTGCAGACCATTCATCTTTGTCATATTCTATTAGATTGCGCCTTAAGCACAAAGTCCAAGAGTTGCCTTGTGTATAAGTATTCCACAAATCATGTATTGATGCCCGTTTCTTTTGGGAAAGAGCATATAGTTTGGGGAAGATCACATAGAAGGGAGCATATAGTTTGGGGAAGATCACATGGGAAGAAGCTTAAATGAAGTGTGGTTTGGTTGCCACCACCTAGTGAGTTGGAAGAGGCTTATCTGCTTTTTATTTGGGTGGAACATGCATATGGTTGTTAGGCTTCTTGGGAGAGTTGAGCATTCTAATGTAAAGATTATCTAAAACAAATAGTATTAGGTGTCTTCTAAGGTCAAAGCTTGACACTTGTTGTGAAACGTCTTGTTCGTTAATACACCATTCTTGGTCCACTAGGATGTCTGTTGGTCTCTTAACCCTTCCAAGGCTTCACGTGTCTCTCCTTTCGTTGTTTGGTTGATCTCTCCCCTTTATCTTCAAGGCACTCTGTCTTTGGGGCTTTATGAAGGGTGAAAATTCTAAAGAAAGTTAAGTTCTTTATTTGGCAGGTTCTCCATGACAGAATTAACACTTTAGATAGGTTGATGTAGAAAGTCCCCATGGCAGATTCTCCGCGACAGAATTAATACTTTTGACGTTGCTCCTACCAGCTTCTTTTGATTTGAACTTTGAAGTACATCTAGCATTTTTTGAAGTATGGTTGATAGGTAGGGTGTAAGATCCCTAATTCTAATGAATATTCTAGAAAGGGCAAATTGGAAGTTCTCCAGTAATTAGTCAGAGGGAGAATGGTAAGGGAACCTCTTGTGGGTATAAATAATGTAAGAAGATGTTTAGAGAGGGAGGTCTTATTTTGGGTTAGGTCATAGGACTTGGAGGAGAGGTTTTGGAGCTCTCAAATTCACCGGTTAGCTTGTCGTTTATCATTTTCAGGTTCGTCTTGTTATTTCTATTTCATGTTTGTTAATGAAGTCAGATCTGAATAGAGAGCGATTTTTAGTAAATTCAGCAGTAGATCTATTCTATTTTGCATTTGGTATTGTTCTGTAAATTTCTTGCGAGATCTGGATATCAGTACCCTTACATATGGCTGGATTATTTGTGGCAAGAGGTTTAGTTATTCGTAACATCATAACTGTGGGAAGGATAGGAAGCTTCTCCATTAATATATTAACTGATTACAAGTGATAAAATTCATGTTAAAGCCAGAAGCTTGGGTAGTGAAATGTTGTTTTTTCTTATTCTGACTAGACAATTTGATTAGGTACCGAATTTTTCTTCTATCTGTAATTGGAGGAACCCCTCTCGTTCAATGTTACGGTCTCAGATAATTCCTAACGAGGTCATAGAAAACATCTGAATGAGTTTATGTATTCAATAGGGTATAATGTGGTCTAGTCTATTCCTTGCTGAATATCAACCAAAGTGGGATATAAGAGAAGAATCTCATTTTGAAACTGACAGCTGGCTTGGGAAAGAATCACGACCTGGTTGGAGTCGTTGGACTTTTTCTGAACTTGCAAGTGATGATGGTTCCAAGTGGTCTGGCATGGAGACCACCAACACCGTTTCAAATTCTAAGCAAGATTAGGGATTGCTGTCAAAGGAACCTTTATCTGGAACCAGAGATTCACATGAGGCGTTTATTACACTAGTGAAAACTATAATAAAAATATGCAAAACACTGCTGAATTGGATGCTGTCAAAAGCTACGACACAAGAACGTCTCCTGGTTTAGATGAATGGAGTGGGACATAACTCTAAGCCGTTGGAGAAATGATTGGGGCAGGTCAGCGAGGGGTAGGAGTAGAAGCCGCAGTTGGAGTAGAAGCCGGAGTAGGAGTAGAAGTCCTCCTCATAGTAGTAAGCGGGACTCAGGATTTCATGATAGAAACAGAAACAGGTCACGTGTTTCAACTCACTTGTGCAAAGATTTTGCTTCTGGCAGATGCAAACGAGGTAGTAATTGTCAATTCCTTCACCCGGAAAGTCAAAATCTGGATGATAGCTGGGAAAATAGGAACAGGAAGGGGGGTCGATCAACTTCTCATGATTCTAGGGACTATTTGAGGAGTGGAATAACACGAGGTTCTCCAAATGATAATAGTAGAGACAGGGACAATGATAGGAGTAAAGCATATTTCTCACGTGGTGAGCGTGAACCTTGCAGTGACAATCTTGTTATATGCAAATTTTTTGCTGCTGGAAATTGTCGAAATAGAAACAATTGCAAATTTTCTCACCATATCCAGTCACGTGCAAGTCCAGATAGGAAGTCAAGTACCGATAGATGGGAACAGGTTCAATGTTCAGATGGTAGGGAACGGTTGTGGGATGGCTCAAAACCAAGTGAATTGGCTAGTGGTTCAGATTTCACTCAGTTGAGAGAGGACAAAAATGAACAAATTGCTAGTCAAGAATCAAAACATAAATGGCCCTCAGAACAAAAATGGAGTCATGGTTTGGATAATGAGAGCAAAATTCAGTGGGATCAAACTGCCAGTATCAAGGCAGTTCAGAGCAACAAGAATGATACCATTCTGAGCAAGGCAGATGATGCTGGTAGTTGCATGGGCCCTTCTGATCCTAAAGGTCACAGAAAGTTGCCAAGTGATGATATGGAGATGTCACCCGATTGGCATTACCCCGTGCAACCATCCAATCATGTAAGGAAAGGAGATTGCAAAATTATGCAGGATTCTGGCTCTCAAACATCCATGGTGTTAGCGACTCTCGACCATGCGAAAGATAAAGAGGCTTTGGCGAAGAAGCAAGACATTGTCATAGAGCCTATAACAGTTGATAACACTAATTCTCGGAAAAACCATAATTTAACAAAAGATGCTACTATGGCATCCACATTCAATGATAAGATTACAATTGACAATACTATTGCTTCACCTGCTGGATGTAATCCTTCTGGTAACATTGTCATTGGACAAATAACGGCATATCAAACCGACCATCCAGGTGGAACTGTAATGAATCCAGTTGCAGATGGAAATATCAGAGCCAAACCTCAAGGGGAGGATGGAAGCATGCCGAGAAATAATCCTGGAACAACCAACGCTCCAAACATAGTAACCAGCGAACAAATTACCCAATTAACTAACCTTTCAGCTTCTCTTGCTCAATATTTTGGAAATGTGCAGCCATTGCCTCAATTTCAGGCCTCTCTTAATACACATAATGTGTCAGAAATACCTTCCTTCCCTTCTGCTGATGCACCAATTGGTGCATTGGGGGCATCGATGAAAACAGGTTCTGTAATTGAATGCTCGAAGCAACATGATTCTACTATCTCCGACAGCTTAGAGCTAAAGAAGCTTGAATCCACTAAAACACCGTCAGACTGTTTACTGAATTCCCCCGGACAGAAAAGTAGTACAGATGTGAAGGATGGAGTACAGATACCAAATTTTCCTCCATCATCTGAACCTTGTAACAAGAGTGATGTTATAAATGATGGGAAACCAGCAGCTGACAGTGAGGCTATCAAAGAGAAAAATGGGGATGGGGATAGTAAGAACAAGACTGAACTGGTGGCGACTGAGGATTCTCGAGAGAATGATACTGCAGAAAATGTGAATGGAAATGATGGGGTCCATGACAAGAATAAAGGTAAGGATGCTAAGGAAATTCGTGCTTTTAAATTTGCTCTTGTGGAGTTTGTCAAGGAACTTTTAAAACCTACTTGGAAGGAAGGTCATATCAGCAAAGATGTTTATAAAACCATAGTCAAGAAAGTGGTGGACAAAGTGACAGGTACCTTGCAGGAGGGTCACATTCCTCAAACGCAGGAGAAAATTGATCAATATCTTTCATTTTCAAAACCAAAGCTCACCAAACTTGTCCAGGCATACGTTGACAGAGTTCAGAAGACGACGTGAGAATACGAGGTCGTGTCGAAGTACATTCTTAAGTATTTTTTGAGGAAAAAGAAATCCCATGTAATAATTTGTTAGAATGGTGCAGCCTTCTGAATGATGTTTATCATGTCTTTTACAGATGTAGTGTAAGCTATCTTCTATTAGCAGTCTTAGGGGGTACACCCTTCATCAGCCCTCTCTGCCAATTAGATATATGGAAATTGTTGCTCTTGGTTTGTGCATTCTTCTTTTCTTTTTTGTTGCTTTTTTTTTCGAGGACCAACAATTCTCGACCAACATTTAGAGGTGGGAAGATTTGAACCTATGCTCTTGATTATTAGGGTTGTATAAGATATTGTTGGAAATCTGATCTTGTCGAC

Coding sequence (CDS)

ATGGAGTGGGACATAACTCTAAGCCGTTGGAGAAATGATTGGGGCAGGTCAGCGAGGGGTAGGAGTAGAAGCCGCAGTTGGAGTAGAAGCCGGAGTAGGAGTAGAAGTCCTCCTCATAGTAGTAAGCGGGACTCAGGATTTCATGATAGAAACAGAAACAGGTCACGTGTTTCAACTCACTTGTGCAAAGATTTTGCTTCTGGCAGATGCAAACGAGGTAGTAATTGTCAATTCCTTCACCCGGAAAGTCAAAATCTGGATGATAGCTGGGAAAATAGGAACAGGAAGGGGGGTCGATCAACTTCTCATGATTCTAGGGACTATTTGAGGAGTGGAATAACACGAGGTTCTCCAAATGATAATAGTAGAGACAGGGACAATGATAGGAGTAAAGCATATTTCTCACGTGGTGAGCGTGAACCTTGCAGTGACAATCTTGTTATATGCAAATTTTTTGCTGCTGGAAATTGTCGAAATAGAAACAATTGCAAATTTTCTCACCATATCCAGTCACGTGCAAGTCCAGATAGGAAGTCAAGTACCGATAGATGGGAACAGGTTCAATGTTCAGATGGTAGGGAACGGTTGTGGGATGGCTCAAAACCAAGTGAATTGGCTAGTGGTTCAGATTTCACTCAGTTGAGAGAGGACAAAAATGAACAAATTGCTAGTCAAGAATCAAAACATAAATGGCCCTCAGAACAAAAATGGAGTCATGGTTTGGATAATGAGAGCAAAATTCAGTGGGATCAAACTGCCAGTATCAAGGCAGTTCAGAGCAACAAGAATGATACCATTCTGAGCAAGGCAGATGATGCTGGTAGTTGCATGGGCCCTTCTGATCCTAAAGGTCACAGAAAGTTGCCAAGTGATGATATGGAGATGTCACCCGATTGGCATTACCCCGTGCAACCATCCAATCATGTAAGGAAAGGAGATTGCAAAATTATGCAGGATTCTGGCTCTCAAACATCCATGGTGTTAGCGACTCTCGACCATGCGAAAGATAAAGAGGCTTTGGCGAAGAAGCAAGACATTGTCATAGAGCCTATAACAGTTGATAACACTAATTCTCGGAAAAACCATAATTTAACAAAAGATGCTACTATGGCATCCACATTCAATGATAAGATTACAATTGACAATACTATTGCTTCACCTGCTGGATGTAATCCTTCTGGTAACATTGTCATTGGACAAATAACGGCATATCAAACCGACCATCCAGGTGGAACTGTAATGAATCCAGTTGCAGATGGAAATATCAGAGCCAAACCTCAAGGGGAGGATGGAAGCATGCCGAGAAATAATCCTGGAACAACCAACGCTCCAAACATAGTAACCAGCGAACAAATTACCCAATTAACTAACCTTTCAGCTTCTCTTGCTCAATATTTTGGAAATGTGCAGCCATTGCCTCAATTTCAGGCCTCTCTTAATACACATAATGTGTCAGAAATACCTTCCTTCCCTTCTGCTGATGCACCAATTGGTGCATTGGGGGCATCGATGAAAACAGGTTCTGTAATTGAATGCTCGAAGCAACATGATTCTACTATCTCCGACAGCTTAGAGCTAAAGAAGCTTGAATCCACTAAAACACCGTCAGACTGTTTACTGAATTCCCCCGGACAGAAAAGTAGTACAGATGTGAAGGATGGAGTACAGATACCAAATTTTCCTCCATCATCTGAACCTTGTAACAAGAGTGATGTTATAAATGATGGGAAACCAGCAGCTGACAGTGAGGCTATCAAAGAGAAAAATGGGGATGGGGATAGTAAGAACAAGACTGAACTGGTGGCGACTGAGGATTCTCGAGAGAATGATACTGCAGAAAATGTGAATGGAAATGATGGGGTCCATGACAAGAATAAAGGTAAGGATGCTAAGGAAATTCGTGCTTTTAAATTTGCTCTTGTGGAGTTTGTCAAGGAACTTTTAAAACCTACTTGGAAGGAAGGTCATATCAGCAAAGATGTTTATAAAACCATAGTCAAGAAAGTGGTGGACAAAGTGACAGGTACCTTGCAGGAGGGTCACATTCCTCAAACGCAGGAGAAAATTGATCAATATCTTTCATTTTCAAAACCAAAGCTCACCAAACTTGTCCAGGCATACGTTGACAGAGTTCAGAAGACGACGTGA

Protein sequence

MEWDITLSRWRNDWGRSARGRSRSRSWSRSRSRSRSPPHSSKRDSGFHDRNRNRSRVSTHLCKDFASGRCKRGSNCQFLHPESQNLDDSWENRNRKGGRSTSHDSRDYLRSGITRGSPNDNSRDRDNDRSKAYFSRGEREPCSDNLVICKFFAAGNCRNRNNCKFSHHIQSRASPDRKSSTDRWEQVQCSDGRERLWDGSKPSELASGSDFTQLREDKNEQIASQESKHKWPSEQKWSHGLDNESKIQWDQTASIKAVQSNKNDTILSKADDAGSCMGPSDPKGHRKLPSDDMEMSPDWHYPVQPSNHVRKGDCKIMQDSGSQTSMVLATLDHAKDKEALAKKQDIVIEPITVDNTNSRKNHNLTKDATMASTFNDKITIDNTIASPAGCNPSGNIVIGQITAYQTDHPGGTVMNPVADGNIRAKPQGEDGSMPRNNPGTTNAPNIVTSEQITQLTNLSASLAQYFGNVQPLPQFQASLNTHNVSEIPSFPSADAPIGALGASMKTGSVIECSKQHDSTISDSLELKKLESTKTPSDCLLNSPGQKSSTDVKDGVQIPNFPPSSEPCNKSDVINDGKPAADSEAIKEKNGDGDSKNKTELVATEDSRENDTAENVNGNDGVHDKNKGKDAKEIRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQEGHIPQTQEKIDQYLSFSKPKLTKLVQAYVDRVQKTT

Homology

[Close]

BLAST of Sed0009753.2 vs. NCBI nr
Match: XP_038881680.1 (zinc finger CCCH domain-containing protein 38 isoform X1 [Benincasa hispida] >XP_038881681.1 zinc finger CCCH domain-containing protein 38 isoform X1 [Benincasa hispida] >XP_038881682.1 zinc finger CCCH domain-containing protein 38 isoform X1 [Benincasa hispida] >XP_038881683.1 zinc finger CCCH domain-containing protein 38 isoform X1 [Benincasa hispida])

HSP 1 Score: 1029.6 bits (2661), Expect = 1.3e-296
Identity = 558/751 (74.30%), Postives = 601/751 (80.03%), Query Frame = 0


Query: 11  RNDWGRSARGRSRSRSWSRSRSRSRSPPHSSKRDSGFHDRNRNRSRVSTHLCKDFASGRC 70
           RND  RS RGRSRSRSWSRSRSRSRS PHS KRDSGFHDRNRNRSR ST LC+DFASGRC
Sbjct: 129 RNDRSRSVRGRSRSRSWSRSRSRSRS-PHSFKRDSGFHDRNRNRSRGSTQLCRDFASGRC 188

Query: 71  KRGSNCQFLHPESQNLDDSWENRNRKGG---RSTSHDSRDYLRSG--------------- 130
           +RG+ CQFLH ++QNLDDSWENRN+KGG   RST HD RD+ R G               
Sbjct: 189 RRGNGCQFLHQDNQNLDDSWENRNKKGGRPLRSTPHDFRDHPRGGRSTAQCTDFVKGRCH 248

Query: 131 ---------------ITRGSPNDNSRDRDNDRSK-AYFSRGEREPCSDNLVICKFFAAGN 190
                          ++RGSPND SRDRDNDRSK  YFSRGEREPCS +LVICKFFAAG 
Sbjct: 249 RGASCKYPHDSAFHELSRGSPNDISRDRDNDRSKEPYFSRGEREPCSSSLVICKFFAAGT 308

Query: 191 CRNRNNCKFSHHIQSRASPDRKSSTDRWEQVQCSDGRERLWDGSKPSELASGSDFTQLRE 250
           CRN  NCKFSHH Q R SP+RKSSTDRWEQ Q SDGR+RLWD +K SELA GSDFTQLRE
Sbjct: 309 CRNGKNCKFSHHSQPRPSPERKSSTDRWEQFQSSDGRDRLWDRTKSSELAGGSDFTQLRE 368

Query: 251 DKNEQIASQESKHKWPSEQKWSHGLDNESKIQWDQTASIKAVQSNKNDTILSKADDAGSC 310
           DK+EQIASQE  + WPSEQKW HGL+NESK QWDQT  IKAVQSNK DTILSKA+DAG  
Sbjct: 369 DKSEQIASQEPSYTWPSEQKWVHGLNNESKTQWDQTVGIKAVQSNKKDTILSKAEDAGGS 428

Query: 311 MGPSDPKGHRKLPSDDMEMSPDWHYPVQPSNHVRKGDCKIMQDSGSQTSMVLATLDHAKD 370
           MG SDP+GHRK PSDDMEMSPDWHYPVQPS+HV KGDC IM +SGS+TSM LATL HA  
Sbjct: 429 MGTSDPRGHRKWPSDDMEMSPDWHYPVQPSSHVVKGDCNIMPESGSKTSMALATLSHAIV 488

Query: 371 KEALAKKQDIVIEPITVDNTNSRKNHNLTKDATMASTFNDKITIDNTIASPAGCNPSGNI 430
           +EALAKKQDI IEPITVDNT+ R+NHNLTKD T++  FNDKITID  IAS A  NPS NI
Sbjct: 489 QEALAKKQDISIEPITVDNTHFRQNHNLTKDVTISPAFNDKITIDKPIASHAEGNPSSNI 548

Query: 431 VIGQITAYQTDHPGGTVMNP-VADGNIRAKPQGEDGSMPRNNPGTTNAPNIVTSEQITQL 490
           V+GQ   Y TDHPGG VMNP V+DGN R K Q E GSMP  N GTT  PNIVTSEQITQL
Sbjct: 549 VLGQRMTYHTDHPGGIVMNPKVSDGNFRVKQQEEGGSMPGINSGTTITPNIVTSEQITQL 608

Query: 491 TNLSASLAQYFGNVQPLPQFQASLNTHNVSEIPSFPSADAPIGALGASMKTGSVIECSKQ 550
           TNLS SLAQYFGNVQPLPQ   SLNTH+VSE PSFP +DA +GALG SMK+G +IE SKQ
Sbjct: 609 TNLSVSLAQYFGNVQPLPQLYTSLNTHSVSETPSFPYSDASVGALGVSMKSGPIIESSKQ 668

Query: 551 HDSTISDSLELKKLESTKTPSDCLLNSPGQKSSTDVKDGVQIPNFPPSSEPCNK------ 610
           HD T+ +SLELKKLE TKTPSDCLLNS GQKS+T+VKDGVQIPN P SS+ CNK      
Sbjct: 669 HDPTLCNSLELKKLEVTKTPSDCLLNSTGQKSTTEVKDGVQIPNLPLSSDSCNKIGISAK 728

Query: 611 -----SDVINDGKPAADSEAIKEKNGDGDSKNKTELVATEDSRENDTAENVNGNDGVHDK 670
                SD IN GKPAAD EAIKEKNGDG+S+NKT+    EDS+END  EN NGNDGVHDK
Sbjct: 729 ETLHGSDAINHGKPAADGEAIKEKNGDGESENKTD---PEDSQENDATENANGNDGVHDK 788

Query: 671 NKGKDAKEIRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQEGHIPQ 716
            K KDAK IRAFKFALVEFVKE+LKPTWKEGHISKDVYKTIVKKVVDKVTGTLQ GHIPQ
Sbjct: 789 KKSKDAKGIRAFKFALVEFVKEVLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQGGHIPQ 848

[Close]

BLAST of Sed0009753.2 vs. NCBI nr
Match: XP_038881687.1 (zinc finger CCCH domain-containing protein 38 isoform X4 [Benincasa hispida])

HSP 1 Score: 1021.9 bits (2641), Expect = 2.6e-294
Identity = 553/743 (74.43%), Postives = 596/743 (80.22%), Query Frame = 0


Query: 19  RGRSRSRSWSRSRSRSRSPPHSSKRDSGFHDRNRNRSRVSTHLCKDFASGRCKRGSNCQF 78
           RGRSRSRSWSRSRSRSRS PHS KRDSGFHDRNRNRSR ST LC+DFASGRC+RG+ CQF
Sbjct: 7   RGRSRSRSWSRSRSRSRS-PHSFKRDSGFHDRNRNRSRGSTQLCRDFASGRCRRGNGCQF 66

Query: 79  LHPESQNLDDSWENRNRKGG---RSTSHDSRDYLRSG----------------------- 138
           LH ++QNLDDSWENRN+KGG   RST HD RD+ R G                       
Sbjct: 67  LHQDNQNLDDSWENRNKKGGRPLRSTPHDFRDHPRGGRSTAQCTDFVKGRCHRGASCKYP 126

Query: 139 -------ITRGSPNDNSRDRDNDRSK-AYFSRGEREPCSDNLVICKFFAAGNCRNRNNCK 198
                  ++RGSPND SRDRDNDRSK  YFSRGEREPCS +LVICKFFAAG CRN  NCK
Sbjct: 127 HDSAFHELSRGSPNDISRDRDNDRSKEPYFSRGEREPCSSSLVICKFFAAGTCRNGKNCK 186

Query: 199 FSHHIQSRASPDRKSSTDRWEQVQCSDGRERLWDGSKPSELASGSDFTQLREDKNEQIAS 258
           FSHH Q R SP+RKSSTDRWEQ Q SDGR+RLWD +K SELA GSDFTQLREDK+EQIAS
Sbjct: 187 FSHHSQPRPSPERKSSTDRWEQFQSSDGRDRLWDRTKSSELAGGSDFTQLREDKSEQIAS 246

Query: 259 QESKHKWPSEQKWSHGLDNESKIQWDQTASIKAVQSNKNDTILSKADDAGSCMGPSDPKG 318
           QE  + WPSEQKW HGL+NESK QWDQT  IKAVQSNK DTILSKA+DAG  MG SDP+G
Sbjct: 247 QEPSYTWPSEQKWVHGLNNESKTQWDQTVGIKAVQSNKKDTILSKAEDAGGSMGTSDPRG 306

Query: 319 HRKLPSDDMEMSPDWHYPVQPSNHVRKGDCKIMQDSGSQTSMVLATLDHAKDKEALAKKQ 378
           HRK PSDDMEMSPDWHYPVQPS+HV KGDC IM +SGS+TSM LATL HA  +EALAKKQ
Sbjct: 307 HRKWPSDDMEMSPDWHYPVQPSSHVVKGDCNIMPESGSKTSMALATLSHAIVQEALAKKQ 366

Query: 379 DIVIEPITVDNTNSRKNHNLTKDATMASTFNDKITIDNTIASPAGCNPSGNIVIGQITAY 438
           DI IEPITVDNT+ R+NHNLTKD T++  FNDKITID  IAS A  NPS NIV+GQ   Y
Sbjct: 367 DISIEPITVDNTHFRQNHNLTKDVTISPAFNDKITIDKPIASHAEGNPSSNIVLGQRMTY 426

Query: 439 QTDHPGGTVMNP-VADGNIRAKPQGEDGSMPRNNPGTTNAPNIVTSEQITQLTNLSASLA 498
            TDHPGG VMNP V+DGN R K Q E GSMP  N GTT  PNIVTSEQITQLTNLS SLA
Sbjct: 427 HTDHPGGIVMNPKVSDGNFRVKQQEEGGSMPGINSGTTITPNIVTSEQITQLTNLSVSLA 486

Query: 499 QYFGNVQPLPQFQASLNTHNVSEIPSFPSADAPIGALGASMKTGSVIECSKQHDSTISDS 558
           QYFGNVQPLPQ   SLNTH+VSE PSFP +DA +GALG SMK+G +IE SKQHD T+ +S
Sbjct: 487 QYFGNVQPLPQLYTSLNTHSVSETPSFPYSDASVGALGVSMKSGPIIESSKQHDPTLCNS 546

Query: 559 LELKKLESTKTPSDCLLNSPGQKSSTDVKDGVQIPNFPPSSEPCNK-----------SDV 618
           LELKKLE TKTPSDCLLNS GQKS+T+VKDGVQIPN P SS+ CNK           SD 
Sbjct: 547 LELKKLEVTKTPSDCLLNSTGQKSTTEVKDGVQIPNLPLSSDSCNKIGISAKETLHGSDA 606

Query: 619 INDGKPAADSEAIKEKNGDGDSKNKTELVATEDSRENDTAENVNGNDGVHDKNKGKDAKE 678
           IN GKPAAD EAIKEKNGDG+S+NKT+    EDS+END  EN NGNDGVHDK K KDAK 
Sbjct: 607 INHGKPAADGEAIKEKNGDGESENKTD---PEDSQENDATENANGNDGVHDKKKSKDAKG 666

Query: 679 IRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQEGHIPQTQEKIDQY 716
           IRAFKFALVEFVKE+LKPTWKEGHISKDVYKTIVKKVVDKVTGTLQ GHIPQTQEKID Y
Sbjct: 667 IRAFKFALVEFVKEVLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQGGHIPQTQEKIDHY 726

[Close]

BLAST of Sed0009753.2 vs. NCBI nr
Match: KAG6595123.1 (UDP-glucuronate:xylan alpha-glucuronosyltransferase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1021.5 bits (2640), Expect = 3.4e-294
Identity = 548/751 (72.97%), Postives = 603/751 (80.29%), Query Frame = 0


Query: 11   RNDWGRSARGRSRSRSWSRSRSRSRSPPHSSKRDSGFHDRNRNRSRVSTHLCKDFASGRC 70
            RNDW RS RGRSRSRSWSRSRSRSR+PP S KRDSG HDRNRNR+RVST LC+DFASGRC
Sbjct: 1187 RNDWSRSVRGRSRSRSWSRSRSRSRTPPRSFKRDSGLHDRNRNRTRVSTQLCRDFASGRC 1246

Query: 71   KRGSNCQFLHPESQNLDDSWENRNRKGG---RSTSHDSRDYLRSG--------------- 130
            +RG  C FLH E+QNLDDSWE+RN+KGG   RST HD RDY RSG               
Sbjct: 1247 RRGGGCPFLHGENQNLDDSWESRNKKGGRSLRSTPHDFRDYSRSGRSAAPCTDFVKGRCH 1306

Query: 131  ---------------ITRGSPNDNSRDRDNDRSK-AYFSRGEREPCSDNLVICKFFAAGN 190
                           ++RGS ND SRDR+NDRSK AY SRGEREP S +LVIC FFAAG 
Sbjct: 1307 RGESCKYPHDSGFHELSRGSSNDISRDRENDRSKEAYLSRGEREPSSSSLVICNFFAAGT 1366

Query: 191  CRNRNNCKFSHHIQSRASPDRKSSTDRWEQVQCSDGRERLWDGSKPSELASGSDFTQLRE 250
            CRN  NCK+SH  Q  AS +RKSS DRWEQV+CSDGRERLWDGSK +ELASGSDFTQLRE
Sbjct: 1367 CRNGKNCKYSHQSQPCASLERKSSADRWEQVECSDGRERLWDGSKSNELASGSDFTQLRE 1426

Query: 251  DKNEQIASQESKHKWPSEQKWSHGLDNESKIQWDQTASIKAVQSNKNDTILSKADDAGSC 310
            +KN+QIASQES++ WPSE K  HGL+NESKIQWDQ ASIKAVQ++KNDTILSK +DAG C
Sbjct: 1427 EKNKQIASQESRYTWPSELKGGHGLNNESKIQWDQAASIKAVQNSKNDTILSKPEDAGGC 1486

Query: 311  MGPSDPKGHRKLPSDDMEMSPDWHYPVQPSNHVRKGDCKIMQDSGSQTSMVLATLDHAKD 370
            +G SD +GHRK PSDDMEMSPDWH+PVQPSNHV KGDC I+ DSGSQTSM LATL HA  
Sbjct: 1487 IGTSDSRGHRKWPSDDMEMSPDWHFPVQPSNHVVKGDCNIILDSGSQTSMALATLSHAIV 1546

Query: 371  KEALAKKQDIVIEPITVDNTNSRKNHNLTKDATMASTFNDKITIDNTIASPAGCNPSGNI 430
            +EALAKKQD+ IEP+TVDNT+ R+NHNLTKD TMAS FNDKITID TIAS A  NPSGNI
Sbjct: 1547 QEALAKKQDVTIEPLTVDNTHFRQNHNLTKDVTMASAFNDKITIDKTIASHAEGNPSGNI 1606

Query: 431  VIGQITAYQTDHPGGTVMNP-VADGNIRAKPQGEDGSMPRNNPGTTNAPNIVTSEQITQL 490
            V+GQ  AY TDHPGG+VMNP +ADG  R KP+ +D SMPR NP TT  PN+VTSEQITQL
Sbjct: 1607 VLGQKMAYHTDHPGGSVMNPNIADGIFRVKPREDDRSMPRINPVTTITPNMVTSEQITQL 1666

Query: 491  TNLSASLAQYFGNVQPLPQFQASLNTHNVSEIPSFPSADAPIGALGASMKTGSVIECSKQ 550
            TNLS SLAQYFGNVQPLPQ  ASL+THNVSE+PSFP +DAP+GALG  MKT  +IECSKQ
Sbjct: 1667 TNLSVSLAQYFGNVQPLPQLYASLSTHNVSELPSFPYSDAPVGALGTLMKTSPIIECSKQ 1726

Query: 551  HDSTISDSLELKKLESTKTPSDCLLNSPGQKSSTDVKDGVQIPNFPPSSEPCNK------ 610
            HDST+ +SLE+KKLE+TK PSD LLN  GQKS TD KD VQ+P FP SS+P NK      
Sbjct: 1727 HDSTVCNSLEVKKLEATKIPSDSLLNFTGQKSMTDAKDEVQLPIFPLSSDPSNKIVISAK 1786

Query: 611  -----SDVINDGKPAADSEAIKEKNGDGDSKNKTELVATEDSRENDTAENVNGNDGVHDK 670
                 SD IN GK AA+ EA  +KNGDGD++N+TE  A EDS ENDT EN NGNDGVHDK
Sbjct: 1787 ETPNESDAINHGKRAAEGEANNKKNGDGDNENRTEAGANEDSEENDTTENANGNDGVHDK 1846

Query: 671  NKGKDAKEIRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQEGHIPQ 716
             KGKD K IRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQ GHIPQ
Sbjct: 1847 KKGKDTKGIRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQGGHIPQ 1906

[Close]

BLAST of Sed0009753.2 vs. NCBI nr
Match: XP_038881684.1 (zinc finger CCCH domain-containing protein 38 isoform X2 [Benincasa hispida])

HSP 1 Score: 1021.1 bits (2639), Expect = 4.5e-294
Identity = 557/761 (73.19%), Postives = 602/761 (79.11%), Query Frame = 0


Query: 7   LSRWR------NDWGRSARGRSRSRSWSRSRSRSRSPPHSSKRDSGFHDRNRNRSRVSTH 66
           L  WR      +D    +RGRSRSRSWSRSRSRSRS PHS KRDSGFHDRNRNRSR ST 
Sbjct: 116 LDGWRRHSSNLSDRNDRSRGRSRSRSWSRSRSRSRS-PHSFKRDSGFHDRNRNRSRGSTQ 175

Query: 67  LCKDFASGRCKRGSNCQFLHPESQNLDDSWENRNRKGG---RSTSHDSRDYLRSG----- 126
           LC+DFASGRC+RG+ CQFLH ++QNLDDSWENRN+KGG   RST HD RD+ R G     
Sbjct: 176 LCRDFASGRCRRGNGCQFLHQDNQNLDDSWENRNKKGGRPLRSTPHDFRDHPRGGRSTAQ 235

Query: 127 -------------------------ITRGSPNDNSRDRDNDRSK-AYFSRGEREPCSDNL 186
                                    ++RGSPND SRDRDNDRSK  YFSRGEREPCS +L
Sbjct: 236 CTDFVKGRCHRGASCKYPHDSAFHELSRGSPNDISRDRDNDRSKEPYFSRGEREPCSSSL 295

Query: 187 VICKFFAAGNCRNRNNCKFSHHIQSRASPDRKSSTDRWEQVQCSDGRERLWDGSKPSELA 246
           VICKFFAAG CRN  NCKFSHH Q R SP+RKSSTDRWEQ Q SDGR+RLWD +K SELA
Sbjct: 296 VICKFFAAGTCRNGKNCKFSHHSQPRPSPERKSSTDRWEQFQSSDGRDRLWDRTKSSELA 355

Query: 247 SGSDFTQLREDKNEQIASQESKHKWPSEQKWSHGLDNESKIQWDQTASIKAVQSNKNDTI 306
            GSDFTQLREDK+EQIASQE  + WPSEQKW HGL+NESK QWDQT  IKAVQSNK DTI
Sbjct: 356 GGSDFTQLREDKSEQIASQEPSYTWPSEQKWVHGLNNESKTQWDQTVGIKAVQSNKKDTI 415

Query: 307 LSKADDAGSCMGPSDPKGHRKLPSDDMEMSPDWHYPVQPSNHVRKGDCKIMQDSGSQTSM 366
           LSKA+DAG  MG SDP+GHRK PSDDMEMSPDWHYPVQPS+HV KGDC IM +SGS+TSM
Sbjct: 416 LSKAEDAGGSMGTSDPRGHRKWPSDDMEMSPDWHYPVQPSSHVVKGDCNIMPESGSKTSM 475

Query: 367 VLATLDHAKDKEALAKKQDIVIEPITVDNTNSRKNHNLTKDATMASTFNDKITIDNTIAS 426
            LATL HA  +EALAKKQDI IEPITVDNT+ R+NHNLTKD T++  FNDKITID  IAS
Sbjct: 476 ALATLSHAIVQEALAKKQDISIEPITVDNTHFRQNHNLTKDVTISPAFNDKITIDKPIAS 535

Query: 427 PAGCNPSGNIVIGQITAYQTDHPGGTVMNP-VADGNIRAKPQGEDGSMPRNNPGTTNAPN 486
            A  NPS NIV+GQ   Y TDHPGG VMNP V+DGN R K Q E GSMP  N GTT  PN
Sbjct: 536 HAEGNPSSNIVLGQRMTYHTDHPGGIVMNPKVSDGNFRVKQQEEGGSMPGINSGTTITPN 595

Query: 487 IVTSEQITQLTNLSASLAQYFGNVQPLPQFQASLNTHNVSEIPSFPSADAPIGALGASMK 546
           IVTSEQITQLTNLS SLAQYFGNVQPLPQ   SLNTH+VSE PSFP +DA +GALG SMK
Sbjct: 596 IVTSEQITQLTNLSVSLAQYFGNVQPLPQLYTSLNTHSVSETPSFPYSDASVGALGVSMK 655

Query: 547 TGSVIECSKQHDSTISDSLELKKLESTKTPSDCLLNSPGQKSSTDVKDGVQIPNFPPSSE 606
           +G +IE SKQHD T+ +SLELKKLE TKTPSDCLLNS GQKS+T+VKDGVQIPN P SS+
Sbjct: 656 SGPIIESSKQHDPTLCNSLELKKLEVTKTPSDCLLNSTGQKSTTEVKDGVQIPNLPLSSD 715

Query: 607 PCNK-----------SDVINDGKPAADSEAIKEKNGDGDSKNKTELVATEDSRENDTAEN 666
            CNK           SD IN GKPAAD EAIKEKNGDG+S+NKT+    EDS+END  EN
Sbjct: 716 SCNKIGISAKETLHGSDAINHGKPAADGEAIKEKNGDGESENKTD---PEDSQENDATEN 775

Query: 667 VNGNDGVHDKNKGKDAKEIRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVT 716
            NGNDGVHDK K KDAK IRAFKFALVEFVKE+LKPTWKEGHISKDVYKTIVKKVVDKVT
Sbjct: 776 ANGNDGVHDKKKSKDAKGIRAFKFALVEFVKEVLKPTWKEGHISKDVYKTIVKKVVDKVT 835

[Close]

BLAST of Sed0009753.2 vs. NCBI nr
Match: XP_038881685.1 (zinc finger CCCH domain-containing protein 38 isoform X3 [Benincasa hispida])

HSP 1 Score: 1020.8 bits (2638), Expect = 5.8e-294
Identity = 552/742 (74.39%), Postives = 595/742 (80.19%), Query Frame = 0


Query: 20  GRSRSRSWSRSRSRSRSPPHSSKRDSGFHDRNRNRSRVSTHLCKDFASGRCKRGSNCQFL 79
           GRSRSRSWSRSRSRSRS PHS KRDSGFHDRNRNRSR ST LC+DFASGRC+RG+ CQFL
Sbjct: 24  GRSRSRSWSRSRSRSRS-PHSFKRDSGFHDRNRNRSRGSTQLCRDFASGRCRRGNGCQFL 83

Query: 80  HPESQNLDDSWENRNRKGG---RSTSHDSRDYLRSG------------------------ 139
           H ++QNLDDSWENRN+KGG   RST HD RD+ R G                        
Sbjct: 84  HQDNQNLDDSWENRNKKGGRPLRSTPHDFRDHPRGGRSTAQCTDFVKGRCHRGASCKYPH 143

Query: 140 ------ITRGSPNDNSRDRDNDRSK-AYFSRGEREPCSDNLVICKFFAAGNCRNRNNCKF 199
                 ++RGSPND SRDRDNDRSK  YFSRGEREPCS +LVICKFFAAG CRN  NCKF
Sbjct: 144 DSAFHELSRGSPNDISRDRDNDRSKEPYFSRGEREPCSSSLVICKFFAAGTCRNGKNCKF 203

Query: 200 SHHIQSRASPDRKSSTDRWEQVQCSDGRERLWDGSKPSELASGSDFTQLREDKNEQIASQ 259
           SHH Q R SP+RKSSTDRWEQ Q SDGR+RLWD +K SELA GSDFTQLREDK+EQIASQ
Sbjct: 204 SHHSQPRPSPERKSSTDRWEQFQSSDGRDRLWDRTKSSELAGGSDFTQLREDKSEQIASQ 263

Query: 260 ESKHKWPSEQKWSHGLDNESKIQWDQTASIKAVQSNKNDTILSKADDAGSCMGPSDPKGH 319
           E  + WPSEQKW HGL+NESK QWDQT  IKAVQSNK DTILSKA+DAG  MG SDP+GH
Sbjct: 264 EPSYTWPSEQKWVHGLNNESKTQWDQTVGIKAVQSNKKDTILSKAEDAGGSMGTSDPRGH 323

Query: 320 RKLPSDDMEMSPDWHYPVQPSNHVRKGDCKIMQDSGSQTSMVLATLDHAKDKEALAKKQD 379
           RK PSDDMEMSPDWHYPVQPS+HV KGDC IM +SGS+TSM LATL HA  +EALAKKQD
Sbjct: 324 RKWPSDDMEMSPDWHYPVQPSSHVVKGDCNIMPESGSKTSMALATLSHAIVQEALAKKQD 383

Query: 380 IVIEPITVDNTNSRKNHNLTKDATMASTFNDKITIDNTIASPAGCNPSGNIVIGQITAYQ 439
           I IEPITVDNT+ R+NHNLTKD T++  FNDKITID  IAS A  NPS NIV+GQ   Y 
Sbjct: 384 ISIEPITVDNTHFRQNHNLTKDVTISPAFNDKITIDKPIASHAEGNPSSNIVLGQRMTYH 443

Query: 440 TDHPGGTVMNP-VADGNIRAKPQGEDGSMPRNNPGTTNAPNIVTSEQITQLTNLSASLAQ 499
           TDHPGG VMNP V+DGN R K Q E GSMP  N GTT  PNIVTSEQITQLTNLS SLAQ
Sbjct: 444 TDHPGGIVMNPKVSDGNFRVKQQEEGGSMPGINSGTTITPNIVTSEQITQLTNLSVSLAQ 503

Query: 500 YFGNVQPLPQFQASLNTHNVSEIPSFPSADAPIGALGASMKTGSVIECSKQHDSTISDSL 559
           YFGNVQPLPQ   SLNTH+VSE PSFP +DA +GALG SMK+G +IE SKQHD T+ +SL
Sbjct: 504 YFGNVQPLPQLYTSLNTHSVSETPSFPYSDASVGALGVSMKSGPIIESSKQHDPTLCNSL 563

Query: 560 ELKKLESTKTPSDCLLNSPGQKSSTDVKDGVQIPNFPPSSEPCNK-----------SDVI 619
           ELKKLE TKTPSDCLLNS GQKS+T+VKDGVQIPN P SS+ CNK           SD I
Sbjct: 564 ELKKLEVTKTPSDCLLNSTGQKSTTEVKDGVQIPNLPLSSDSCNKIGISAKETLHGSDAI 623

Query: 620 NDGKPAADSEAIKEKNGDGDSKNKTELVATEDSRENDTAENVNGNDGVHDKNKGKDAKEI 679
           N GKPAAD EAIKEKNGDG+S+NKT+    EDS+END  EN NGNDGVHDK K KDAK I
Sbjct: 624 NHGKPAADGEAIKEKNGDGESENKTD---PEDSQENDATENANGNDGVHDKKKSKDAKGI 683

Query: 680 RAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQEGHIPQTQEKIDQYL 716
           RAFKFALVEFVKE+LKPTWKEGHISKDVYKTIVKKVVDKVTGTLQ GHIPQTQEKID YL
Sbjct: 684 RAFKFALVEFVKEVLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQGGHIPQTQEKIDHYL 743

[Close]

BLAST of Sed0009753.2 vs. ExPASy Swiss-Prot
Match: Q9LIH5 (Zinc finger CCCH domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=At3g18640 PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 3.9e-51
Identity = 216/722 (29.92%), Postives = 324/722 (44.88%), Query Frame = 0


Query: 21  RSRSRSWSRSRSRSRSPPHSSKRDSGFHDRNRNRSRVSTHLCKDFASGRCKRGSNCQFLH 80
           RS SRS SRSRSRSRSP + ++RD+G +DR++ R++VS    ++F     KRGS+   L 
Sbjct: 81  RSGSRSNSRSRSRSRSPVYRARRDAGSYDRHKTRTQVSPTPIREFN----KRGSD--HLF 140

Query: 81  PESQNLDDSWENRNRKGGRSTSHDSRDYLRSGITRGS----------PNDNSRDR----- 140
            +S++    WE+  RK  R T + + D+    +  G+          P DNSR R     
Sbjct: 141 DQSRSDHYGWEDNIRK-PRETKYHTDDFREEAMMEGARSSDYNNTDYPEDNSRIRRRRSE 200

Query: 141 ---DNDRSKAYFSRGEREPCSDNLVICKFFAAGN--CRNRNNCKFSHHIQSRASPDRKSS 200
              + +  +     GE      + + CKFFAAG   CRN   C+FSHH+  R  P     
Sbjct: 201 FTGEKETQRRDGGDGEGGFHRSSNIPCKFFAAGTGFCRNGKYCRFSHHVADRKQP----- 260

Query: 201 TDRWEQVQCSDGRERLWDGSKPSELASGSDFTQLREDKNEQIASQESKHKWPSEQKWSHG 260
                                              +D N     Q++ +      KW   
Sbjct: 261 -----------------------------------QDNNNNFYRQDNNNHTSGHNKW--- 320

Query: 261 LDNESKIQWDQTASIKAVQSNKNDTILSKADDAGSCMGPSDPKGHRKLPSDDMEMSPDWH 320
            ++  ++   +   I+  +++K     SK + + S +             DDMEMSPDW+
Sbjct: 321 -NDVERLDNGRVGGIEVSRASKKGVSESKGNGSSSWI-------------DDMEMSPDWN 380

Query: 321 YPVQPSNHVRKGDCKIMQDSGSQTSMVLATLDHAKDKEALAKKQDIVIEPITVDNTNSRK 380
           Y VQ      K D  +     S  S VL   D           + +  +P+      S +
Sbjct: 381 YGVQALKKPVKEDHSVGIIGQSSQSRVLKD-DQRSSGMFSHGGRTMAEKPVAA----SHQ 440

Query: 381 NHNLTKDATMASTFNDKITIDNTIASPAGCNPSGNIVIGQITAYQTDHPGGTVMNPVADG 440
           +++ + +     TFN      N +   +     G+  +  + A  T+   G+ ++ +  G
Sbjct: 441 SYSNSVNVAPVETFNQN---HNALPYQSSLTAGGSQQV--LAAAATNFSVGSNLSNLESG 500

Query: 441 NIRAKPQGEDGSMPRNNPGTTNAP----NIVTSEQITQLTNLSASLAQYFGNVQPLPQFQ 500
            +             N+  T   P    N V+ EQI Q+TN+SASLAQ+  N QP+PQ +
Sbjct: 501 KV----------YQDNHHSTVEKPVLVQNTVSREQIDQITNISASLAQFLANGQPIPQLE 560

Query: 501 ASLN--THNVSEIPSFPSADAPIGALGASMKTGSVIECSKQHDSTISDSLELKKLESTKT 560
            +L    H+ S  P+  +  + + +   +   G  +    +    ++ S ++  +E    
Sbjct: 561 QALQLPLHSESVQPNQATTQSNVVSSNPNQLWGLGMSTGAEGVPAVTAS-KISNVEE--- 620

Query: 561 PSDCLLNSPGQKSSTDVKDGVQIPNFPPSSEPCNKSDVINDGKPAADSEAIKEKNG--DG 620
                               +Q  +  P      K+D           EA KE+ G   G
Sbjct: 621 --------------------IQEVSLDPKENGDKKTD-----------EASKEEEGKKTG 676

Query: 621 DSKNKTELVATEDSRENDTAENVNGNDGVHDKNKGKDAKEIRAFKFALVEFVKELLKPTW 680
           +  N  E V  ED   +D     +G+D   +  K KD K +RAFKFALVE VKELLKP W
Sbjct: 681 EDTNDAENVVDEDEDGDD-----DGSD--EENKKEKDPKGMRAFKFALVEVVKELLKPAW 676

Query: 681 KEGHISKDVYKTIVKKVVDKVTGTLQEGHIPQTQEKIDQYLSFSKPKLTKLVQAYVDRVQ 715
           KEG ++KD YK IVKKV +KVTGT+Q G++PQTQEKID YLS SKPKLTKLVQAYV +++
Sbjct: 741 KEGKLNKDGYKNIVKKVAEKVTGTMQSGNVPQTQEKIDHYLSASKPKLTKLVQAYVGKIK 676

[Close]

BLAST of Sed0009753.2 vs. ExPASy Swiss-Prot
Match: Q6YYC0 (Zinc finger CCCH domain-containing protein 55 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0135800 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.6e-23
Identity = 222/825 (26.91%), Postives = 326/825 (39.52%), Query Frame = 0


Query: 11  RNDWGRSARGRSRSRSWSRSRSRSRSPPHSSKRDSGFHDR------NRNRSRVSTHL-CK 70
           R  W RS R RSRSRS SRS  R R    S  R   F DR       R+RS     L C+
Sbjct: 177 RGGWNRSRRNRSRSRSRSRSIGRGRGRSRSRSRSPYFSDRGSEWRVERSRSSGGPALPCR 236

Query: 71  DFASGRCKRGSNCQFLHPES---------------------------QNLDDSWENRNRK 130
           DF +GRC+RGSNC+F H +                            +  DD   NR  +
Sbjct: 237 DFVAGRCRRGSNCRFPHEDGVRRQFDEHYPVDSREKYGHQNRDFMDPREQDDYLRNRPPR 296

Query: 131 GG----------------RSTSHDSRDYLRSGITRG----------SPNDNSRD--RDN- 190
           GG                RST     D+++   +RG          +P+   RD  RDN 
Sbjct: 297 GGHYDEGTWERSEPRREYRSTM-PCHDFVKGRCSRGANCRYVHDDSTPHGGWRDEVRDNA 356

Query: 191 -DRSKAYFSRGER-EPCSDNLVICKFFAAGNCRNRNNCKFSHHIQSRA-----SPDRKSS 250
             RS    S G R E    N   CKFFA G CR   NC + H   S++     +PD    
Sbjct: 357 IGRSGPDSSYGNRTEHRRTNKNPCKFFANGGCRRGQNCPYLHEEASQSQMGLGAPDEPGY 416

Query: 251 TD---------RWEQ----VQCSDGRERLWDGSKPSELASG-SDFTQLREDKNEQIASQE 310
           T           W +    VQ S       D   P    +G +D     ++++ + A   
Sbjct: 417 TGGPTTRGDYLSWSEQNNSVQASSHVLSRDDRENPVPQGTGRNDSRYENKNRHSKDAGSS 476

Query: 311 SKHKWPSEQKWSHGLDNESKIQWDQTAS-IKAVQSNKNDTILSKADDAGSCMGPSDPKGH 370
               +P +   S G  N+ +I   Q    I +VQ+      + K  D G   GP      
Sbjct: 477 QYQIFPQDDFGSVG-QNKPEIAASQLPQFIPSVQTGTESINIDKVSDMGGQSGPG----- 536

Query: 371 RKLPSDDMEMSPDWHYPVQPSNHVRKGDCKIMQDSGSQTSMV--------LATLDHAKDK 430
                 ++ M    H       H   G     QD+ SQ S          L     +   
Sbjct: 537 ---TVGNLSMQIGMHSANLLGGH-NLGQKAESQDAISQISAAPSLPGATQLQNTTSSVPL 596

Query: 431 EALAKKQDIVIEPITVDNTNSRKNHNLTKDATMASTFNDKITIDNTIASPAGCNPSGNIV 490
            +  ++ D  + P       +R++      AT   T N   ++ +   +P   +     +
Sbjct: 597 NSQVQQSDFSLHP-------NRQDQFAVPHAT---TNNSAPSMQSQPVAPYMGHSQHGYI 656

Query: 491 IGQITAYQTDHPGGTVMNPVADGNIRAKPQGEDGSMPRNNPGTTNA-PNIVTSEQITQLT 550
           +G  +        G + N               G +P+N P   +A  N  TS+      
Sbjct: 657 MGAQSLPDLSVHNGQIFNV--------------GQVPQNLPTIVHAGQNQATSDTPNLGR 716

Query: 551 NLSASLAQYFGNVQPL-PQFQASLNT-HNVSEIPSFPSAD---API--GALGASMKTGSV 610
           +      Q   N QP+ P  Q    T   +S + S  S D   AP+   A+ +  +   V
Sbjct: 717 DSGDQGLQNTHNFQPVAPNEQTQSQTLQGLSVVASSSSVDMAGAPLSHNAVSSQEEVRRV 776

Query: 611 IECSKQH--DSTISDSLELKKLESTKTPSDCLLNSPGQKSSTDVKDGVQIPNFP--PSSE 670
                Q+   S  +D+  L+   S   P+  L+N     +S+     VQ  ++P    + 
Sbjct: 777 TASLAQYFVPSLTADTSGLQ--SSQPDPNSSLMN-----NSSAAPQAVQPNHWPWLQQAG 836

Query: 671 PCNKSDVINDGKPAADS----EAIKEKNGD-------------GDSKNKTELVATEDSRE 714
               S ++   +PA  +     A    NG+               +    E    E+ +E
Sbjct: 837 MVQPSHIVPPEQPAPQTFQAPMAAGSSNGNPLLLPHSVAPTVPAAALATNETTPAENKKE 896

[Close]

BLAST of Sed0009753.2 vs. ExPASy Swiss-Prot
Match: Q84VG7 (Protein FRIGIDA-ESSENTIAL 1 OS=Arabidopsis thaliana OX=3702 GN=FES1 PE=1 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 8.6e-14
Identity = 38/84 (45.24%), Postives = 56/84 (66.67%), Query Frame = 0


Query: 631 KEIRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQEGH-IPQTQEKI 690
           K +R F+ A+VE +KE+LKP W+EG ++KDV+  IVKK  +KV G   + H +P   E +
Sbjct: 503 KVMRLFRTAVVETIKEMLKPLWREGRLTKDVHNMIVKKAAEKVVGAAVQFHQVPTDTESV 562

Query: 691 DQYLSFSKPKLTKLVQAYVDRVQK 714
           DQYL  S  ++ KLV+ YV++  K
Sbjct: 563 DQYLGLSGTRIVKLVEGYVEKYGK 586

[Close]

BLAST of Sed0009753.2 vs. ExPASy Swiss-Prot
Match: Q75K81 (Zinc finger CCCH domain-containing protein 36 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0497500 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.5e-13
Identity = 82/273 (30.04%), Postives = 127/273 (46.52%), Query Frame = 0


Query: 448 TSEQITQLTNLSASLAQYFGNVQPLPQFQASLNTHNVSEIPSFPSADAPIGALGASMKTG 507
           TS     +++ S  +    G + P+   +  +   +V  +PSF   D P          G
Sbjct: 469 TSRSTLHVSSSSQPVVASAGKLSPI---KDEVWITSVPFVPSFNFPDFP----------G 528

Query: 508 SVIECSKQHDSTISDSLELKKLESTKT--PSDCLLNSPGQKSSTDVKDGVQIPNFPPSSE 567
           S      Q+D  + DS++  K+ES      S+   +   Q   T+V  G  +       +
Sbjct: 529 STSPSKSQYDPLV-DSIDPPKVESLNNLKTSNISCSISSQHVDTNVIRGGSL------EK 588

Query: 568 PCNKSDVIN---DGKPAADSEAIKEKNG-----DGDSKNKTELVATEDSRENDTAENVNG 627
           P   +D +      K + D   I    G     DGD++ KT        R+ND + N   
Sbjct: 589 PLTFADKLARNVSAKGSNDFGLISYDRGHSSSLDGDNRVKT------CERKNDASLNNEK 648

Query: 628 NDGVHDKNKGKDAKEIRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTL 687
           +D                F+F LVE VKEL+KP WKEG++SK+ +K IVKK VDK+  +L
Sbjct: 649 SD----------------FRFHLVEHVKELVKPIWKEGNLSKEAHKLIVKKSVDKIFASL 699

Query: 688 QEGHIPQTQEKIDQYLSFSKPKLTKLVQAYVDR 711
           +   +P+T++ I  Y++ S PK+ KLV+AYVDR
Sbjct: 709 EPNQMPETEKAITTYITASAPKIEKLVKAYVDR 699

[Close]

BLAST of Sed0009753.2 vs. ExPASy TrEMBL
Match: A0A6J1KSC6 (zinc finger CCCH domain-containing protein 55-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496818 PE=4 SV=1)

HSP 1 Score: 1016.9 bits (2628), Expect = 4.1e-293
Identity = 546/751 (72.70%), Postives = 601/751 (80.03%), Query Frame = 0


Query: 11  RNDWGRSARGRSRSRSWSRSRSRSRSPPHSSKRDSGFHDRNRNRSRVSTHLCKDFASGRC 70
           RNDW RS RGRSRSRSWSRSRSRSR+PP S KRDSGFHDRNRNR+RVST LC+DFASGRC
Sbjct: 112 RNDWSRSVRGRSRSRSWSRSRSRSRTPPRSFKRDSGFHDRNRNRTRVSTQLCRDFASGRC 171

Query: 71  KRGSNCQFLHPESQNLDDSWENRNRKGG---RSTSHDSRDYLRSG--------------- 130
           +RG  C FLHPE+QNLDDSWE+RN+KGG   RST HD RDY RSG               
Sbjct: 172 RRGGGCPFLHPENQNLDDSWESRNKKGGRSVRSTPHDFRDYSRSGRPAAPCTDFVKGRCH 231

Query: 131 ---------------ITRGSPNDNSRDRDNDRSK-AYFSRGEREPCSDNLVICKFFAAGN 190
                          ++RGS ND SRDR+NDRSK AY SRGEREP S +LVIC FFAAG 
Sbjct: 232 RGESCKYPHDSGFHELSRGSSNDISRDRENDRSKEAYLSRGEREPSSSSLVICNFFAAGT 291

Query: 191 CRNRNNCKFSHHIQSRASPDRKSSTDRWEQVQCSDGRERLWDGSKPSELASGSDFTQLRE 250
           CRN  NCK+SH  Q  AS +RKSS DRWEQ++CSDGRERLWDGSK +ELASGSDFTQLRE
Sbjct: 292 CRNGKNCKYSHQSQPCASLERKSSADRWEQIECSDGRERLWDGSKSNELASGSDFTQLRE 351

Query: 251 DKNEQIASQESKHKWPSEQKWSHGLDNESKIQWDQTASIKAVQSNKNDTILSKADDAGSC 310
           +KN+QIASQES++ WPSE K  HGL+NESKIQWDQ ASIKAVQ++KND ILSK +D G C
Sbjct: 352 EKNKQIASQESRYTWPSELKGGHGLNNESKIQWDQAASIKAVQNSKNDIILSKPEDTGGC 411

Query: 311 MGPSDPKGHRKLPSDDMEMSPDWHYPVQPSNHVRKGDCKIMQDSGSQTSMVLATLDHAKD 370
           +G SD +GHRK PSDDMEMSPDWH+PVQPSNHV KGDC I+ DSGSQTSM LATL HA  
Sbjct: 412 IGTSDSRGHRKWPSDDMEMSPDWHFPVQPSNHVVKGDCNIILDSGSQTSMALATLSHAIV 471

Query: 371 KEALAKKQDIVIEPITVDNTNSRKNHNLTKDATMASTFNDKITIDNTIASPAGCNPSGNI 430
           +EALAKKQD+ IEP+TVDNT+ R+NHNLTKD TMAS FNDKITID TIAS A  NPSGNI
Sbjct: 472 QEALAKKQDVTIEPLTVDNTHFRQNHNLTKDVTMASVFNDKITIDKTIASHAEGNPSGNI 531

Query: 431 VIGQITAYQTDHPGGTVMNP-VADGNIRAKPQGEDGSMPRNNPGTTNAPNIVTSEQITQL 490
           V+GQ  AY  DHPGG+VMNP VADG  + KP+ +D SMP  NP TT  PN+VTS+QITQL
Sbjct: 532 VLGQKMAYHPDHPGGSVMNPNVADGIFKVKPREDDRSMPGINPVTTITPNMVTSDQITQL 591

Query: 491 TNLSASLAQYFGNVQPLPQFQASLNTHNVSEIPSFPSADAPIGALGASMKTGSVIECSKQ 550
           TNLS SLAQYFGNVQPLPQ  ASL+THNVSEIPSFP +DAP+GALG  MKT  +IECSKQ
Sbjct: 592 TNLSVSLAQYFGNVQPLPQLYASLSTHNVSEIPSFPYSDAPVGALGTLMKTSPIIECSKQ 651

Query: 551 HDSTISDSLELKKLESTKTPSDCLLNSPGQKSSTDVKDGVQIPNFPPSSEPCNK------ 610
           HDST+ +SLE+KKLE+TK PSD LLN  GQKS  D KD VQIP FP SS+P NK      
Sbjct: 652 HDSTVCNSLEVKKLEATKIPSDSLLNFTGQKSMIDAKDEVQIPIFPLSSDPSNKIAISAK 711

Query: 611 -----SDVINDGKPAADSEAIKEKNGDGDSKNKTELVATEDSRENDTAENVNGNDGVHDK 670
                SD IN GK AA+ EA  +KNGDGD++N+TE  A EDS ENDTAEN NGNDGVHDK
Sbjct: 712 ETLNESDAINHGKRAAEGEANNKKNGDGDNENRTEAGANEDSEENDTAENANGNDGVHDK 771

Query: 671 NKGKDAKEIRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQEGHIPQ 716
            KGKD K IRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQ GHIPQ
Sbjct: 772 KKGKDTKGIRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQGGHIPQ 831

[Close]

BLAST of Sed0009753.2 vs. ExPASy TrEMBL
Match: A0A6J1HDY4 (zinc finger CCCH domain-containing protein 38-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463115 PE=4 SV=1)

HSP 1 Score: 1015.8 bits (2625), Expect = 9.1e-293
Identity = 547/751 (72.84%), Postives = 599/751 (79.76%), Query Frame = 0


Query: 11  RNDWGRSARGRSRSRSWSRSRSRSRSPPHSSKRDSGFHDRNRNRSRVSTHLCKDFASGRC 70
           RNDW RS RGRSRSRSWSRSRSRSR+PP S KRDSGFHDRNRNR+RVST LC+DFASGRC
Sbjct: 112 RNDWSRSVRGRSRSRSWSRSRSRSRTPPRSFKRDSGFHDRNRNRTRVSTQLCRDFASGRC 171

Query: 71  KRGSNCQFLHPESQNLDDSWENRNRKGG---RSTSHDSRDYLRSG--------------- 130
           +RG  C FLH E+QNLDDSWE+RN+KGG   RST HD RDY RSG               
Sbjct: 172 RRGGGCPFLHAENQNLDDSWESRNKKGGRSLRSTPHDFRDYSRSGRSAAPCTDFVKGRCH 231

Query: 131 ---------------ITRGSPNDNSRDRDNDRSK-AYFSRGEREPCSDNLVICKFFAAGN 190
                          ++RGS ND SRDR+NDRSK AY SRGEREP S +LVIC FFAAG 
Sbjct: 232 RGESCKYPHDSGFHELSRGSSNDISRDRENDRSKEAYLSRGEREPSSSSLVICNFFAAGT 291

Query: 191 CRNRNNCKFSHHIQSRASPDRKSSTDRWEQVQCSDGRERLWDGSKPSELASGSDFTQLRE 250
           CRN  NCK+SH  Q  AS +RKSS DRWEQV+CSDGRERLWDGSK +ELASGSDFTQLRE
Sbjct: 292 CRNGKNCKYSHQSQPCASLERKSSADRWEQVECSDGRERLWDGSKSNELASGSDFTQLRE 351

Query: 251 DKNEQIASQESKHKWPSEQKWSHGLDNESKIQWDQTASIKAVQSNKNDTILSKADDAGSC 310
           +KN+QIASQES++ WPSE K  H L+NESKIQWDQ ASIK VQ++KNDTILSK +DAG C
Sbjct: 352 EKNKQIASQESRYTWPSELKGGHSLNNESKIQWDQAASIKTVQNSKNDTILSKPEDAGGC 411

Query: 311 MGPSDPKGHRKLPSDDMEMSPDWHYPVQPSNHVRKGDCKIMQDSGSQTSMVLATLDHAKD 370
           +G SD +GHRK PSDDMEMSPDWH+PVQPSNHV KGDC I+ DSGSQTSM LATL HA  
Sbjct: 412 IGTSDSRGHRKWPSDDMEMSPDWHFPVQPSNHVVKGDCNIILDSGSQTSMALATLSHAIV 471

Query: 371 KEALAKKQDIVIEPITVDNTNSRKNHNLTKDATMASTFNDKITIDNTIASPAGCNPSGNI 430
           +EALAKKQD+ IEP+TVDNT+ R+NHNLTKD TMAS FNDKITID TIAS A  NPSGNI
Sbjct: 472 QEALAKKQDVTIEPLTVDNTHFRQNHNLTKDVTMASAFNDKITIDKTIASHAEGNPSGNI 531

Query: 431 VIGQITAYQTDHPGGTVMNP-VADGNIRAKPQGEDGSMPRNNPGTTNAPNIVTSEQITQL 490
           V+GQ  AY TDHPGG+VMNP VADG  R KP+ +D SMP  NP TT  PN+VTSEQITQL
Sbjct: 532 VLGQKMAYHTDHPGGSVMNPNVADGIFRVKPREDDRSMPGINPVTTITPNMVTSEQITQL 591

Query: 491 TNLSASLAQYFGNVQPLPQFQASLNTHNVSEIPSFPSADAPIGALGASMKTGSVIECSKQ 550
           TNLS SLAQYFGNVQPLPQ  ASL+ HNVSEIPSFP  DAP+GALG  MKT  +IECSKQ
Sbjct: 592 TNLSVSLAQYFGNVQPLPQLYASLSAHNVSEIPSFPYTDAPVGALGTLMKTSPIIECSKQ 651

Query: 551 HDSTISDSLELKKLESTKTPSDCLLNSPGQKSSTDVKDGVQIPNFPPSSEPCNK------ 610
           HDST+ +SLE+KKLE+TK PSD LLN  GQKS TD KD VQ+P FP SS+P NK      
Sbjct: 652 HDSTVCNSLEVKKLEATKIPSDSLLNFIGQKSMTDAKDEVQLPIFPLSSDPSNKIVISAK 711

Query: 611 -----SDVINDGKPAADSEAIKEKNGDGDSKNKTELVATEDSRENDTAENVNGNDGVHDK 670
                SD IN GK AA+ EA  +KNGDGD++N+TE  A EDS ENDT EN NGNDGVHDK
Sbjct: 712 ETPNESDAINHGKRAAEGEANNKKNGDGDNENRTEAGANEDSEENDTTENANGNDGVHDK 771

Query: 671 NKGKDAKEIRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQEGHIPQ 716
            KGKD K IRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQ GHIPQ
Sbjct: 772 KKGKDTKGIRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQGGHIPQ 831

[Close]

BLAST of Sed0009753.2 vs. ExPASy TrEMBL
Match: A0A1S3B2H8 (zinc finger CCCH domain-containing protein 38 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485269 PE=4 SV=1)

HSP 1 Score: 1009.2 bits (2608), Expect = 8.5e-291
Identity = 548/750 (73.07%), Postives = 596/750 (79.47%), Query Frame = 0


Query: 11  RNDWGRSARGRSRSRSWSRSRSRSRSPPHSSKRDSGFHDRNRNRSRVSTHLCKDFASGRC 70
           RND  RS RGRSRSRSWSRSRSRSRS PHS KRDSGFHDRNRNRSRVST LC++F SGRC
Sbjct: 130 RNDGSRSVRGRSRSRSWSRSRSRSRS-PHSFKRDSGFHDRNRNRSRVSTQLCREFVSGRC 189

Query: 71  KRGSNCQFLHPESQNLDDSWENRNRKGG---RSTSHDSRDYLRSG--------------- 130
           +RG+ CQFLH ++QN+DDSWE+RNRKGG   RST HD RDY RSG               
Sbjct: 190 RRGNGCQFLHQDNQNMDDSWESRNRKGGRSLRSTPHDFRDYPRSGRAAAQCTDFVKGRCH 249

Query: 131 ---------------ITRGSPNDNSRDRDNDRSK-AYFSRGEREPCSDNLVICKFFAAGN 190
                          + RGSPND SRDR+NDRSK AYFSRGEREP + +LVICKFFAAG 
Sbjct: 250 RGASCKYPHDSAFHELARGSPNDISRDRENDRSKEAYFSRGEREPGNSSLVICKFFAAGT 309

Query: 191 CRNRNNCKFSHHIQSRASPDRKSSTDRWEQVQCSDGRERLWDGSKPSELASGSDFTQLRE 250
           CRN  NCKFSHH QSRASP+RKSSTDRWEQVQ SDGRERLWDG+K SELAS SDF+QLRE
Sbjct: 310 CRNGKNCKFSHHSQSRASPERKSSTDRWEQVQFSDGRERLWDGTKSSELASASDFSQLRE 369

Query: 251 DKNEQIASQESKHKWPSEQKWSHGLDNESKIQWDQTASIKAVQSNKNDTILSKADDAGSC 310
           DK EQIASQE  + W SEQKW HGL+NESK QWDQT  IKAVQ+NKNDTILSKA+DAG C
Sbjct: 370 DKGEQIASQEPSYTWASEQKWVHGLNNESKTQWDQTVGIKAVQNNKNDTILSKAEDAGGC 429

Query: 311 MGPSDPKGHRKLPSDDMEMSPDWHYPVQPSNHVRKGDCKIMQDSGSQTSMVLATLDHAKD 370
           +G SDP+GHRK PSDDMEMSPDWHYPVQPSNHV KGDC I+ DSGS+TS+ LATL HA  
Sbjct: 430 IGTSDPRGHRKWPSDDMEMSPDWHYPVQPSNHVVKGDCNIVPDSGSKTSIALATLSHAIV 489

Query: 371 KEALAKKQDIVIEPITVDNTNSRKNHNLTKDATMASTFNDKITIDNTIASPAGCNPSGNI 430
           +EALAKKQDI IEPIT DNT+ R+NHNLTKD T AS FNDKITID TIAS A  NPS N 
Sbjct: 490 QEALAKKQDIAIEPITADNTHFRQNHNLTKDVTSASAFNDKITIDKTIASHAEGNPSSNT 549

Query: 431 VIGQITAYQTDHPGGTVMNP-VADGNIRAKPQGEDGSMPRNNPGTTNAPNIVTSEQITQL 490
           V+GQ  AY TDHPGGTV+NP V+DGN R K Q +DGS+P  N GTT  PNIVTSEQITQL
Sbjct: 550 VLGQRMAYHTDHPGGTVLNPKVSDGNFRVKQQEDDGSVPGINSGTTITPNIVTSEQITQL 609

Query: 491 TNLSASLAQYFGNVQPLPQFQASLNTHNVSEIPSFPSADAPIGALGASMKTGSVIECSKQ 550
           TNLS SLAQYFGNVQPLPQ   SLNT +VSE  SFP +DA  GALG   K+G V+E SKQ
Sbjct: 610 TNLSVSLAQYFGNVQPLPQLYNSLNTQSVSETASFPYSDASTGALGLPTKSGPVVESSKQ 669

Query: 551 HDSTISDSLELKKLESTKTPSDCLLNSPGQKSSTDVKDGVQIPNFPPS----------SE 610
           HDS + +SLELKK E TKTPSDCL N+ GQKS+T+VKD VQ+PN PPS           E
Sbjct: 670 HDSALCNSLELKKFEVTKTPSDCLPNAAGQKSTTEVKDEVQMPNLPPSDPRDKVDISAKE 729

Query: 611 PCNKSDVINDGKPAADSEAIKEKNGDGDSKNKTELVATEDSRENDTAENVNGNDGVHDKN 670
             ++SD IN  KPAAD EA KEKNGDGD++NKT+    EDS+ENDT EN NGNDG HDK 
Sbjct: 730 TLHRSDAINHAKPAADGEATKEKNGDGDNENKTD---PEDSQENDTTENANGNDGAHDKK 789

Query: 671 KGKDAKEIRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQEGHIPQT 716
           KGKDAK IRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQ GHIPQT
Sbjct: 790 KGKDAKGIRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQGGHIPQT 849

[Close]

BLAST of Sed0009753.2 vs. ExPASy TrEMBL
Match: A0A6J1KQV2 (zinc finger CCCH domain-containing protein 55-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496818 PE=4 SV=1)

HSP 1 Score: 1009.2 bits (2608), Expect = 8.5e-291
Identity = 544/751 (72.44%), Postives = 600/751 (79.89%), Query Frame = 0


Query: 11  RNDWGRSARGRSRSRSWSRSRSRSRSPPHSSKRDSGFHDRNRNRSRVSTHLCKDFASGRC 70
           RNDW   +RGRSRSRSWSRSRSRSR+PP S KRDSGFHDRNRNR+RVST LC+DFASGRC
Sbjct: 112 RNDW---SRGRSRSRSWSRSRSRSRTPPRSFKRDSGFHDRNRNRTRVSTQLCRDFASGRC 171

Query: 71  KRGSNCQFLHPESQNLDDSWENRNRKGG---RSTSHDSRDYLRSG--------------- 130
           +RG  C FLHPE+QNLDDSWE+RN+KGG   RST HD RDY RSG               
Sbjct: 172 RRGGGCPFLHPENQNLDDSWESRNKKGGRSVRSTPHDFRDYSRSGRPAAPCTDFVKGRCH 231

Query: 131 ---------------ITRGSPNDNSRDRDNDRSK-AYFSRGEREPCSDNLVICKFFAAGN 190
                          ++RGS ND SRDR+NDRSK AY SRGEREP S +LVIC FFAAG 
Sbjct: 232 RGESCKYPHDSGFHELSRGSSNDISRDRENDRSKEAYLSRGEREPSSSSLVICNFFAAGT 291

Query: 191 CRNRNNCKFSHHIQSRASPDRKSSTDRWEQVQCSDGRERLWDGSKPSELASGSDFTQLRE 250
           CRN  NCK+SH  Q  AS +RKSS DRWEQ++CSDGRERLWDGSK +ELASGSDFTQLRE
Sbjct: 292 CRNGKNCKYSHQSQPCASLERKSSADRWEQIECSDGRERLWDGSKSNELASGSDFTQLRE 351

Query: 251 DKNEQIASQESKHKWPSEQKWSHGLDNESKIQWDQTASIKAVQSNKNDTILSKADDAGSC 310
           +KN+QIASQES++ WPSE K  HGL+NESKIQWDQ ASIKAVQ++KND ILSK +D G C
Sbjct: 352 EKNKQIASQESRYTWPSELKGGHGLNNESKIQWDQAASIKAVQNSKNDIILSKPEDTGGC 411

Query: 311 MGPSDPKGHRKLPSDDMEMSPDWHYPVQPSNHVRKGDCKIMQDSGSQTSMVLATLDHAKD 370
           +G SD +GHRK PSDDMEMSPDWH+PVQPSNHV KGDC I+ DSGSQTSM LATL HA  
Sbjct: 412 IGTSDSRGHRKWPSDDMEMSPDWHFPVQPSNHVVKGDCNIILDSGSQTSMALATLSHAIV 471

Query: 371 KEALAKKQDIVIEPITVDNTNSRKNHNLTKDATMASTFNDKITIDNTIASPAGCNPSGNI 430
           +EALAKKQD+ IEP+TVDNT+ R+NHNLTKD TMAS FNDKITID TIAS A  NPSGNI
Sbjct: 472 QEALAKKQDVTIEPLTVDNTHFRQNHNLTKDVTMASVFNDKITIDKTIASHAEGNPSGNI 531

Query: 431 VIGQITAYQTDHPGGTVMNP-VADGNIRAKPQGEDGSMPRNNPGTTNAPNIVTSEQITQL 490
           V+GQ  AY  DHPGG+VMNP VADG  + KP+ +D SMP  NP TT  PN+VTS+QITQL
Sbjct: 532 VLGQKMAYHPDHPGGSVMNPNVADGIFKVKPREDDRSMPGINPVTTITPNMVTSDQITQL 591

Query: 491 TNLSASLAQYFGNVQPLPQFQASLNTHNVSEIPSFPSADAPIGALGASMKTGSVIECSKQ 550
           TNLS SLAQYFGNVQPLPQ  ASL+THNVSEIPSFP +DAP+GALG  MKT  +IECSKQ
Sbjct: 592 TNLSVSLAQYFGNVQPLPQLYASLSTHNVSEIPSFPYSDAPVGALGTLMKTSPIIECSKQ 651

Query: 551 HDSTISDSLELKKLESTKTPSDCLLNSPGQKSSTDVKDGVQIPNFPPSSEPCNK------ 610
           HDST+ +SLE+KKLE+TK PSD LLN  GQKS  D KD VQIP FP SS+P NK      
Sbjct: 652 HDSTVCNSLEVKKLEATKIPSDSLLNFTGQKSMIDAKDEVQIPIFPLSSDPSNKIAISAK 711

Query: 611 -----SDVINDGKPAADSEAIKEKNGDGDSKNKTELVATEDSRENDTAENVNGNDGVHDK 670
                SD IN GK AA+ EA  +KNGDGD++N+TE  A EDS ENDTAEN NGNDGVHDK
Sbjct: 712 ETLNESDAINHGKRAAEGEANNKKNGDGDNENRTEAGANEDSEENDTAENANGNDGVHDK 771

Query: 671 NKGKDAKEIRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQEGHIPQ 716
            KGKD K IRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQ GHIPQ
Sbjct: 772 KKGKDTKGIRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQGGHIPQ 831

[Close]

BLAST of Sed0009753.2 vs. ExPASy TrEMBL
Match: A0A6J1HDB4 (zinc finger CCCH domain-containing protein 38-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463115 PE=4 SV=1)

HSP 1 Score: 1008.1 bits (2605), Expect = 1.9e-290
Identity = 545/751 (72.57%), Postives = 598/751 (79.63%), Query Frame = 0


Query: 11  RNDWGRSARGRSRSRSWSRSRSRSRSPPHSSKRDSGFHDRNRNRSRVSTHLCKDFASGRC 70
           RNDW   +RGRSRSRSWSRSRSRSR+PP S KRDSGFHDRNRNR+RVST LC+DFASGRC
Sbjct: 112 RNDW---SRGRSRSRSWSRSRSRSRTPPRSFKRDSGFHDRNRNRTRVSTQLCRDFASGRC 171

Query: 71  KRGSNCQFLHPESQNLDDSWENRNRKGG---RSTSHDSRDYLRSG--------------- 130
           +RG  C FLH E+QNLDDSWE+RN+KGG   RST HD RDY RSG               
Sbjct: 172 RRGGGCPFLHAENQNLDDSWESRNKKGGRSLRSTPHDFRDYSRSGRSAAPCTDFVKGRCH 231

Query: 131 ---------------ITRGSPNDNSRDRDNDRSK-AYFSRGEREPCSDNLVICKFFAAGN 190
                          ++RGS ND SRDR+NDRSK AY SRGEREP S +LVIC FFAAG 
Sbjct: 232 RGESCKYPHDSGFHELSRGSSNDISRDRENDRSKEAYLSRGEREPSSSSLVICNFFAAGT 291

Query: 191 CRNRNNCKFSHHIQSRASPDRKSSTDRWEQVQCSDGRERLWDGSKPSELASGSDFTQLRE 250
           CRN  NCK+SH  Q  AS +RKSS DRWEQV+CSDGRERLWDGSK +ELASGSDFTQLRE
Sbjct: 292 CRNGKNCKYSHQSQPCASLERKSSADRWEQVECSDGRERLWDGSKSNELASGSDFTQLRE 351

Query: 251 DKNEQIASQESKHKWPSEQKWSHGLDNESKIQWDQTASIKAVQSNKNDTILSKADDAGSC 310
           +KN+QIASQES++ WPSE K  H L+NESKIQWDQ ASIK VQ++KNDTILSK +DAG C
Sbjct: 352 EKNKQIASQESRYTWPSELKGGHSLNNESKIQWDQAASIKTVQNSKNDTILSKPEDAGGC 411

Query: 311 MGPSDPKGHRKLPSDDMEMSPDWHYPVQPSNHVRKGDCKIMQDSGSQTSMVLATLDHAKD 370
           +G SD +GHRK PSDDMEMSPDWH+PVQPSNHV KGDC I+ DSGSQTSM LATL HA  
Sbjct: 412 IGTSDSRGHRKWPSDDMEMSPDWHFPVQPSNHVVKGDCNIILDSGSQTSMALATLSHAIV 471

Query: 371 KEALAKKQDIVIEPITVDNTNSRKNHNLTKDATMASTFNDKITIDNTIASPAGCNPSGNI 430
           +EALAKKQD+ IEP+TVDNT+ R+NHNLTKD TMAS FNDKITID TIAS A  NPSGNI
Sbjct: 472 QEALAKKQDVTIEPLTVDNTHFRQNHNLTKDVTMASAFNDKITIDKTIASHAEGNPSGNI 531

Query: 431 VIGQITAYQTDHPGGTVMNP-VADGNIRAKPQGEDGSMPRNNPGTTNAPNIVTSEQITQL 490
           V+GQ  AY TDHPGG+VMNP VADG  R KP+ +D SMP  NP TT  PN+VTSEQITQL
Sbjct: 532 VLGQKMAYHTDHPGGSVMNPNVADGIFRVKPREDDRSMPGINPVTTITPNMVTSEQITQL 591

Query: 491 TNLSASLAQYFGNVQPLPQFQASLNTHNVSEIPSFPSADAPIGALGASMKTGSVIECSKQ 550
           TNLS SLAQYFGNVQPLPQ  ASL+ HNVSEIPSFP  DAP+GALG  MKT  +IECSKQ
Sbjct: 592 TNLSVSLAQYFGNVQPLPQLYASLSAHNVSEIPSFPYTDAPVGALGTLMKTSPIIECSKQ 651

Query: 551 HDSTISDSLELKKLESTKTPSDCLLNSPGQKSSTDVKDGVQIPNFPPSSEPCNK------ 610
           HDST+ +SLE+KKLE+TK PSD LLN  GQKS TD KD VQ+P FP SS+P NK      
Sbjct: 652 HDSTVCNSLEVKKLEATKIPSDSLLNFIGQKSMTDAKDEVQLPIFPLSSDPSNKIVISAK 711

Query: 611 -----SDVINDGKPAADSEAIKEKNGDGDSKNKTELVATEDSRENDTAENVNGNDGVHDK 670
                SD IN GK AA+ EA  +KNGDGD++N+TE  A EDS ENDT EN NGNDGVHDK
Sbjct: 712 ETPNESDAINHGKRAAEGEANNKKNGDGDNENRTEAGANEDSEENDTTENANGNDGVHDK 771

Query: 671 NKGKDAKEIRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQEGHIPQ 716
            KGKD K IRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQ GHIPQ
Sbjct: 772 KKGKDTKGIRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQGGHIPQ 831

[Close]

BLAST of Sed0009753.2 vs. TAIR 10
Match: AT3G18640.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 204.5 bits (519), Expect = 2.8e-52
Identity = 216/722 (29.92%), Postives = 324/722 (44.88%), Query Frame = 0


Query: 21  RSRSRSWSRSRSRSRSPPHSSKRDSGFHDRNRNRSRVSTHLCKDFASGRCKRGSNCQFLH 80
           RS SRS SRSRSRSRSP + ++RD+G +DR++ R++VS    ++F     KRGS+   L 
Sbjct: 81  RSGSRSNSRSRSRSRSPVYRARRDAGSYDRHKTRTQVSPTPIREFN----KRGSD--HLF 140

Query: 81  PESQNLDDSWENRNRKGGRSTSHDSRDYLRSGITRGS----------PNDNSRDR----- 140
            +S++    WE+  RK  R T + + D+    +  G+          P DNSR R     
Sbjct: 141 DQSRSDHYGWEDNIRK-PRETKYHTDDFREEAMMEGARSSDYNNTDYPEDNSRIRRRRSE 200

Query: 141 ---DNDRSKAYFSRGEREPCSDNLVICKFFAAGN--CRNRNNCKFSHHIQSRASPDRKSS 200
              + +  +     GE      + + CKFFAAG   CRN   C+FSHH+  R  P     
Sbjct: 201 FTGEKETQRRDGGDGEGGFHRSSNIPCKFFAAGTGFCRNGKYCRFSHHVADRKQP----- 260

Query: 201 TDRWEQVQCSDGRERLWDGSKPSELASGSDFTQLREDKNEQIASQESKHKWPSEQKWSHG 260
                                              +D N     Q++ +      KW   
Sbjct: 261 -----------------------------------QDNNNNFYRQDNNNHTSGHNKW--- 320

Query: 261 LDNESKIQWDQTASIKAVQSNKNDTILSKADDAGSCMGPSDPKGHRKLPSDDMEMSPDWH 320
            ++  ++   +   I+  +++K     SK + + S +             DDMEMSPDW+
Sbjct: 321 -NDVERLDNGRVGGIEVSRASKKGVSESKGNGSSSWI-------------DDMEMSPDWN 380

Query: 321 YPVQPSNHVRKGDCKIMQDSGSQTSMVLATLDHAKDKEALAKKQDIVIEPITVDNTNSRK 380
           Y VQ      K D  +     S  S VL   D           + +  +P+      S +
Sbjct: 381 YGVQALKKPVKEDHSVGIIGQSSQSRVLKD-DQRSSGMFSHGGRTMAEKPVAA----SHQ 440

Query: 381 NHNLTKDATMASTFNDKITIDNTIASPAGCNPSGNIVIGQITAYQTDHPGGTVMNPVADG 440
           +++ + +     TFN      N +   +     G+  +  + A  T+   G+ ++ +  G
Sbjct: 441 SYSNSVNVAPVETFNQN---HNALPYQSSLTAGGSQQV--LAAAATNFSVGSNLSNLESG 500

Query: 441 NIRAKPQGEDGSMPRNNPGTTNAP----NIVTSEQITQLTNLSASLAQYFGNVQPLPQFQ 500
            +             N+  T   P    N V+ EQI Q+TN+SASLAQ+  N QP+PQ +
Sbjct: 501 KV----------YQDNHHSTVEKPVLVQNTVSREQIDQITNISASLAQFLANGQPIPQLE 560

Query: 501 ASLN--THNVSEIPSFPSADAPIGALGASMKTGSVIECSKQHDSTISDSLELKKLESTKT 560
            +L    H+ S  P+  +  + + +   +   G  +    +    ++ S ++  +E    
Sbjct: 561 QALQLPLHSESVQPNQATTQSNVVSSNPNQLWGLGMSTGAEGVPAVTAS-KISNVEE--- 620

Query: 561 PSDCLLNSPGQKSSTDVKDGVQIPNFPPSSEPCNKSDVINDGKPAADSEAIKEKNG--DG 620
                               +Q  +  P      K+D           EA KE+ G   G
Sbjct: 621 --------------------IQEVSLDPKENGDKKTD-----------EASKEEEGKKTG 676

Query: 621 DSKNKTELVATEDSRENDTAENVNGNDGVHDKNKGKDAKEIRAFKFALVEFVKELLKPTW 680
           +  N  E V  ED   +D     +G+D   +  K KD K +RAFKFALVE VKELLKP W
Sbjct: 681 EDTNDAENVVDEDEDGDD-----DGSD--EENKKEKDPKGMRAFKFALVEVVKELLKPAW 676

Query: 681 KEGHISKDVYKTIVKKVVDKVTGTLQEGHIPQTQEKIDQYLSFSKPKLTKLVQAYVDRVQ 715
           KEG ++KD YK IVKKV +KVTGT+Q G++PQTQEKID YLS SKPKLTKLVQAYV +++
Sbjct: 741 KEGKLNKDGYKNIVKKVAEKVTGTMQSGNVPQTQEKIDHYLSASKPKLTKLVQAYVGKIK 676

[Close]

BLAST of Sed0009753.2 vs. TAIR 10
Match: AT3G26850.1 (histone-lysine N-methyltransferases )

HSP 1 Score: 95.5 bits (236), Expect = 1.8e-19
Identity = 53/129 (41.09%), Postives = 82/129 (63.57%), Query Frame = 0


Query: 591 DGDSKNKTELVATEDSRENDTAE-NVNGNDGVHDKNKGK-----DAKEIRAFKFALVEFV 650
           DG   N  E +      EN   E NV+  D    K++ K      ++ ++ FK  L +FV
Sbjct: 136 DGRECNSHETLTPNSDNENPKVENNVHEGDNTRKKSREKSKERDSSRSMKLFKVVLTKFV 195

Query: 651 KELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQEGHIPQTQEKIDQYLSFSKPKLTKLV 710
           K+LLKP+W++G++SK+ +KTIVK+VVDKV+ +++   IP+++ KID+Y+  S+ KLTKLV
Sbjct: 196 KDLLKPSWRQGNMSKEAFKTIVKRVVDKVSNSMEGRRIPKSRAKIDKYIDSSQQKLTKLV 255

Query: 711 QAYVDRVQK 714
             YVD+  K
Sbjct: 256 MGYVDKYVK 264

[Close]

BLAST of Sed0009753.2 vs. TAIR 10
Match: AT3G26850.2 (histone-lysine N-methyltransferases )

HSP 1 Score: 95.5 bits (236), Expect = 1.8e-19
Identity = 53/129 (41.09%), Postives = 82/129 (63.57%), Query Frame = 0


Query: 591 DGDSKNKTELVATEDSRENDTAE-NVNGNDGVHDKNKGK-----DAKEIRAFKFALVEFV 650
           DG   N  E +      EN   E NV+  D    K++ K      ++ ++ FK  L +FV
Sbjct: 136 DGRECNSHETLTPNSDNENPKVENNVHEGDNTRKKSREKSKERDSSRSMKLFKVVLTKFV 195

Query: 651 KELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQEGHIPQTQEKIDQYLSFSKPKLTKLV 710
           K+LLKP+W++G++SK+ +KTIVK+VVDKV+ +++   IP+++ KID+Y+  S+ KLTKLV
Sbjct: 196 KDLLKPSWRQGNMSKEAFKTIVKRVVDKVSNSMEGRRIPKSRAKIDKYIDSSQQKLTKLV 255

Query: 711 QAYVDRVQK 714
             YVD+  K
Sbjct: 256 MGYVDKYVK 264

[Close]

BLAST of Sed0009753.2 vs. TAIR 10
Match: AT2G33835.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 80.5 bits (197), Expect = 6.1e-15
Identity = 38/84 (45.24%), Postives = 56/84 (66.67%), Query Frame = 0


Query: 631 KEIRAFKFALVEFVKELLKPTWKEGHISKDVYKTIVKKVVDKVTGTLQEGH-IPQTQEKI 690
           K +R F+ A+VE +KE+LKP W+EG ++KDV+  IVKK  +KV G   + H +P   E +
Sbjct: 503 KVMRLFRTAVVETIKEMLKPLWREGRLTKDVHNMIVKKAAEKVVGAAVQFHQVPTDTESV 562

Query: 691 DQYLSFSKPKLTKLVQAYVDRVQK 714
           DQYL  S  ++ KLV+ YV++  K
Sbjct: 563 DQYLGLSGTRIVKLVEGYVEKYGK 586

The following BLAST results are available for this feature:

BLAST of Sed0009753.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881680.1	1.3e-296	74.30	zinc finger CCCH domain-containing protein 38 isoform X1 [Benincasa hispida] >XP...	[more]
XP_038881687.1	2.6e-294	74.43	zinc finger CCCH domain-containing protein 38 isoform X4 [Benincasa hispida]	[more]
KAG6595123.1	3.4e-294	72.97	UDP-glucuronate:xylan alpha-glucuronosyltransferase 1, partial [Cucurbita argyro...	[more]
XP_038881684.1	4.5e-294	73.19	zinc finger CCCH domain-containing protein 38 isoform X2 [Benincasa hispida]	[more]
XP_038881685.1	5.8e-294	74.39	zinc finger CCCH domain-containing protein 38 isoform X3 [Benincasa hispida]	[more]

BLAST of Sed0009753.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LIH5	3.9e-51	29.92	Zinc finger CCCH domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6YYC0	1.6e-23	26.91	Zinc finger CCCH domain-containing protein 55 OS=Oryza sativa subsp. japonica OX...	[more]
Q84VG7	8.6e-14	45.24	Protein FRIGIDA-ESSENTIAL 1 OS=Arabidopsis thaliana OX=3702 GN=FES1 PE=1 SV=2	[more]
Q75K81	1.5e-13	30.04	Zinc finger CCCH domain-containing protein 36 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of Sed0009753.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KSC6	4.1e-293	72.70	zinc finger CCCH domain-containing protein 55-like isoform X1 OS=Cucurbita maxim...	[more]
A0A6J1HDY4	9.1e-293	72.84	zinc finger CCCH domain-containing protein 38-like isoform X1 OS=Cucurbita mosch...	[more]
A0A1S3B2H8	8.5e-291	73.07	zinc finger CCCH domain-containing protein 38 isoform X1 OS=Cucumis melo OX=3656...	[more]
A0A6J1KQV2	8.5e-291	72.44	zinc finger CCCH domain-containing protein 55-like isoform X2 OS=Cucurbita maxim...	[more]
A0A6J1HDB4	1.9e-290	72.57	zinc finger CCCH domain-containing protein 38-like isoform X2 OS=Cucurbita mosch...	[more]

BLAST of Sed0009753.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18640.1	2.8e-52	29.92	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT3G26850.1	1.8e-19	41.09	histone-lysine N-methyltransferases	[more]
AT3G26850.2	1.8e-19	41.09	histone-lysine N-methyltransferases	[more]
AT2G33835.1	6.1e-15	45.24	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 143..169 e-value: 0.001 score: 28.4 coord: 56..82 e-value: 8.0E-7 score: 38.7
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 61..82 e-value: 3.9E-6 score: 26.6
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 143..170 score: 13.901127
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 56..83 score: 15.75078
None	No IPR available	GENE3D	2.30.30.1190		coord: 120..177 e-value: 8.3E-6 score: 27.9
None	No IPR available	PFAM	PF14608	zf-CCCH_2	coord: 148..167 e-value: 4.2E-4 score: 20.8
None	No IPR available	GENE3D	4.10.1000.10		coord: 46..119 e-value: 5.6E-8 score: 34.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 534..554
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 425..444
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 580..626
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 534..626
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..53
None	No IPR available	PANTHER	PTHR36886	PROTEIN FRIGIDA-ESSENTIAL 1	coord: 11..109 coord: 112..712
None	No IPR available	PANTHER	PTHR36886:SF8	ZINC FINGER CCCH DOMAIN PROTEIN-RELATED	coord: 11..109
None	No IPR available	PANTHER	PTHR36886:SF8	ZINC FINGER CCCH DOMAIN PROTEIN-RELATED	coord: 112..712
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 55..83
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 145..168

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0009753	Sed0009753	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009753.2-five_prime_utr	Sed0009753.2-five_prime_utr-LG10:3263222..3265029	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009753.2-exon	Sed0009753.2-exon-LG10:3263222..3265085	exon
Sed0009753.2-exon	Sed0009753.2-exon-LG10:3265375..3267433	exon
Sed0009753.2-exon	Sed0009753.2-exon-LG10:3269854..3270245	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009753.2-cds	Sed0009753.2-cds-LG10:3265030..3265085	CDS
Sed0009753.2-cds	Sed0009753.2-cds-LG10:3265375..3267433	CDS
Sed0009753.2-cds	Sed0009753.2-cds-LG10:3269854..3269886	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009753.2-three_prime_utr	Sed0009753.2-three_prime_utr-LG10:3269887..3270245	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0009753.2	Sed0009753.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003677	DNA binding