Sed0009497.1 (mRNA) Chayote v1

Overview


Name	Sed0009497.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	pathogenesis-related protein 1-like
Location	LG10: 34147423 .. 34147949 (-)
Sequence length	527
RNA-Seq Expression	Sed0009497.1
Synteny	Sed0009497.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAGATTTCAATCTTAATTAGCATAAAACAATATGGGTGTGGTGATTATTAAGCTGTGGTTGTCTCTATTTTGTGTGTTGTTGAGTACTAGCATGCTGCCCGGTTCTGTTGGTCAAGACTCGCCTCAAGATTATGTCGATGCCCACAACGTTGCTCGTGCCCAAGTTGGTGTGGAACCTATCGAATGGGATGAGGAAGTCGCAAACTATGCAAGACAATATGCCAATGAGCGCAGCAACGACTGCCAATTGTTACACTCGAGTGGGCCTTATGGCGAGAACCTCGCAAAACATGGCGGTGAAATGTCAGGCGTCGAAGCCGTTCAAATGTGGGTGAACGAACAACAGTTTTACGACTATCCTTCGAACACGTGTGTCGATAACAAAATGTGTGGCCATTACACTCAAGTTGTGTGGAGGAACTCGGTGAGAGTTGGATGTGCAAAAGTGAAATGTAACAATGGAGGAACATTCATCACTTGCAATTATGATCCACAAGGCAATTTCATAGGCGAGTGGCCATACTAA

mRNA sequence

ATAGATTTCAATCTTAATTAGCATAAAACAATATGGGTGTGGTGATTATTAAGCTGTGGTTGTCTCTATTTTGTGTGTTGTTGAGTACTAGCATGCTGCCCGGTTCTGTTGGTCAAGACTCGCCTCAAGATTATGTCGATGCCCACAACGTTGCTCGTGCCCAAGTTGGTGTGGAACCTATCGAATGGGATGAGGAAGTCGCAAACTATGCAAGACAATATGCCAATGAGCGCAGCAACGACTGCCAATTGTTACACTCGAGTGGGCCTTATGGCGAGAACCTCGCAAAACATGGCGGTGAAATGTCAGGCGTCGAAGCCGTTCAAATGTGGGTGAACGAACAACAGTTTTACGACTATCCTTCGAACACGTGTGTCGATAACAAAATGTGTGGCCATTACACTCAAGTTGTGTGGAGGAACTCGGTGAGAGTTGGATGTGCAAAAGTGAAATGTAACAATGGAGGAACATTCATCACTTGCAATTATGATCCACAAGGCAATTTCATAGGCGAGTGGCCATACTAA

Coding sequence (CDS)

ATGGGTGTGGTGATTATTAAGCTGTGGTTGTCTCTATTTTGTGTGTTGTTGAGTACTAGCATGCTGCCCGGTTCTGTTGGTCAAGACTCGCCTCAAGATTATGTCGATGCCCACAACGTTGCTCGTGCCCAAGTTGGTGTGGAACCTATCGAATGGGATGAGGAAGTCGCAAACTATGCAAGACAATATGCCAATGAGCGCAGCAACGACTGCCAATTGTTACACTCGAGTGGGCCTTATGGCGAGAACCTCGCAAAACATGGCGGTGAAATGTCAGGCGTCGAAGCCGTTCAAATGTGGGTGAACGAACAACAGTTTTACGACTATCCTTCGAACACGTGTGTCGATAACAAAATGTGTGGCCATTACACTCAAGTTGTGTGGAGGAACTCGGTGAGAGTTGGATGTGCAAAAGTGAAATGTAACAATGGAGGAACATTCATCACTTGCAATTATGATCCACAAGGCAATTTCATAGGCGAGTGGCCATACTAA

Protein sequence

MGVVIIKLWLSLFCVLLSTSMLPGSVGQDSPQDYVDAHNVARAQVGVEPIEWDEEVANYARQYANERSNDCQLLHSSGPYGENLAKHGGEMSGVEAVQMWVNEQQFYDYPSNTCVDNKMCGHYTQVVWRNSVRVGCAKVKCNNGGTFITCNYDPQGNFIGEWPY

Homology

[Close]

BLAST of Sed0009497.1 vs. NCBI nr
Match: XP_022952146.1 (pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 272.7 bits (696), Expect = 2.1e-69
Identity = 122/165 (73.94%), Postives = 142/165 (86.06%), Query Frame = 0


Query: 5   IIKLWLSLFCVLLSTSMLPGSVGQDSPQDYVDAHNVARA-----QVGVEPIEWDEEVANY 64
           ++K+ LSLFCV   T +LP S+ QDSPQDYVDAHN+AR+     QVG++PI+WDEE+ANY
Sbjct: 3   LVKISLSLFCVFCIT-ILPSSLAQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELANY 62

Query: 65  ARQYANERSNDCQLLHSSGPYGENLAKHGGEMSGVEAVQMWVNEQQFYDYPSNTCVDNKM 124
           A QYANERSNDCQLLHS+GPYGENLA H  EM+G+EAVQMWV+EQQFYDY SNTC + KM
Sbjct: 63  ATQYANERSNDCQLLHSNGPYGENLAVHSSEMTGIEAVQMWVDEQQFYDYASNTCTEGKM 122

Query: 125 CGHYTQVVWRNSVRVGCAKVKCNNGGTFITCNYDPQGNFIGEWPY 165
           CGHYTQVVW+N+ +VGCAKV+CNNGG FITCNYDP GN IGEWPY
Sbjct: 123 CGHYTQVVWQNTTKVGCAKVRCNNGGKFITCNYDPPGNVIGEWPY 166

[Close]

BLAST of Sed0009497.1 vs. NCBI nr
Match: XP_023511466.1 (pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 272.3 bits (695), Expect = 2.7e-69
Identity = 122/165 (73.94%), Postives = 142/165 (86.06%), Query Frame = 0


Query: 5   IIKLWLSLFCVLLSTSMLPGSVGQDSPQDYVDAHNVARA-----QVGVEPIEWDEEVANY 64
           ++K+ LSLFCV   T +L  S+ QDSPQDYVDAHN+AR+     QVG++PI+WDEE+ANY
Sbjct: 3   LVKISLSLFCVFCIT-ILSSSLAQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELANY 62

Query: 65  ARQYANERSNDCQLLHSSGPYGENLAKHGGEMSGVEAVQMWVNEQQFYDYPSNTCVDNKM 124
           A QYANERSNDCQLLHS+GPYGENLA H  EM+G+EAVQMWV+EQQFYDY SNTC + KM
Sbjct: 63  ATQYANERSNDCQLLHSNGPYGENLAMHSSEMTGIEAVQMWVDEQQFYDYASNTCTEGKM 122

Query: 125 CGHYTQVVWRNSVRVGCAKVKCNNGGTFITCNYDPQGNFIGEWPY 165
           CGHYTQVVW+N+ +VGCAKV+CNNGGTFITCNYDP GN IGEWPY
Sbjct: 123 CGHYTQVVWQNTTKVGCAKVRCNNGGTFITCNYDPPGNVIGEWPY 166

[Close]

BLAST of Sed0009497.1 vs. NCBI nr
Match: XP_023511498.1 (pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 272.3 bits (695), Expect = 2.7e-69
Identity = 121/165 (73.33%), Postives = 142/165 (86.06%), Query Frame = 0


Query: 5   IIKLWLSLFCVLLSTSMLPGSVGQDSPQDYVDAHNVARA-----QVGVEPIEWDEEVANY 64
           ++K+ LSLFC+   T +LP S+ QDSPQDYVDAHN+AR+     QVG++PI+WDEE+ANY
Sbjct: 3   LVKISLSLFCIFCIT-ILPSSLAQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELANY 62

Query: 65  ARQYANERSNDCQLLHSSGPYGENLAKHGGEMSGVEAVQMWVNEQQFYDYPSNTCVDNKM 124
           A QYANERSNDCQLLHS+GPYGENLA H   M+G+EAVQMWV+EQQFYDY SNTC + KM
Sbjct: 63  ATQYANERSNDCQLLHSNGPYGENLAMHSSGMTGIEAVQMWVDEQQFYDYASNTCTEGKM 122

Query: 125 CGHYTQVVWRNSVRVGCAKVKCNNGGTFITCNYDPQGNFIGEWPY 165
           CGHYTQVVW+N+ +VGCAKV+CNNGGTFITCNYDP GN IGEWPY
Sbjct: 123 CGHYTQVVWQNTTKVGCAKVRCNNGGTFITCNYDPPGNVIGEWPY 166

[Close]

BLAST of Sed0009497.1 vs. NCBI nr
Match: XP_022952613.1 (pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 271.6 bits (693), Expect = 4.6e-69
Identity = 119/165 (72.12%), Postives = 142/165 (86.06%), Query Frame = 0


Query: 5   IIKLWLSLFCVLLSTSMLPGSVGQDSPQDYVDAHNVARA-----QVGVEPIEWDEEVANY 64
           ++K+  SLFC+   T +LP S+ QD PQDYVDAHN+AR+     QVG++PI+WDEE+ANY
Sbjct: 3   LVKISFSLFCIFCIT-ILPSSLAQDFPQDYVDAHNIARSQVSAVQVGIKPIQWDEELANY 62

Query: 65  ARQYANERSNDCQLLHSSGPYGENLAKHGGEMSGVEAVQMWVNEQQFYDYPSNTCVDNKM 124
           A +YANERSNDCQLLHS+GPYGENLA H  EM+G+EAVQMWV+EQQFYDY SNTC++ KM
Sbjct: 63  ATEYANERSNDCQLLHSNGPYGENLAMHSSEMTGIEAVQMWVDEQQFYDYASNTCIEGKM 122

Query: 125 CGHYTQVVWRNSVRVGCAKVKCNNGGTFITCNYDPQGNFIGEWPY 165
           CGHYTQVVW+N+ +VGCAKV+CNNGGTFITCNYDP GN IGEWPY
Sbjct: 123 CGHYTQVVWQNTTKVGCAKVRCNNGGTFITCNYDPPGNIIGEWPY 166

[Close]

BLAST of Sed0009497.1 vs. NCBI nr
Match: XP_023511465.1 (pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.2 bits (692), Expect = 6.0e-69
Identity = 121/165 (73.33%), Postives = 141/165 (85.45%), Query Frame = 0


Query: 5   IIKLWLSLFCVLLSTSMLPGSVGQDSPQDYVDAHNVARA-----QVGVEPIEWDEEVANY 64
           ++K+  SLFCV   T +LP S+ QDSPQDYVDAHN+AR+     QVG++PI+WDEE+ANY
Sbjct: 3   LVKISFSLFCVFCIT-ILPSSLAQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELANY 62

Query: 65  ARQYANERSNDCQLLHSSGPYGENLAKHGGEMSGVEAVQMWVNEQQFYDYPSNTCVDNKM 124
           A QYANERSNDCQLLHS+GPYGENLA H   M+G+EAVQMWV+EQQFYDY SNTC + KM
Sbjct: 63  ATQYANERSNDCQLLHSNGPYGENLAMHSSGMTGIEAVQMWVDEQQFYDYASNTCTEGKM 122

Query: 125 CGHYTQVVWRNSVRVGCAKVKCNNGGTFITCNYDPQGNFIGEWPY 165
           CGHYTQVVW+N+ +VGCAKV+CNNGGTFITCNYDP GN IGEWPY
Sbjct: 123 CGHYTQVVWQNTTKVGCAKVRCNNGGTFITCNYDPPGNVIGEWPY 166

[Close]

BLAST of Sed0009497.1 vs. ExPASy Swiss-Prot
Match: Q9ZNS4 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 9.6e-54
Identity = 92/137 (67.15%), Postives = 113/137 (82.48%), Query Frame = 0


Query: 28  QDSPQDYVDAHNVARAQVGVEPIEWDEEVANYARQYANERSNDCQLLHSSGPYGENLAKH 87
           QDS QDYV+AHN AR+Q+GV P++WDE +A YAR YAN+   DC+L+HS GPYGENLAK 
Sbjct: 27  QDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAKS 86

Query: 88  GGEMSGVEAVQMWVNEQQFYDYPSNTCVDNKMCGHYTQVVWRNSVRVGCAKVKCNNGGTF 147
           GG++SGV AV +WVNE+  Y+Y +NTC  N +CGHYTQVVWRNSVR+GCAKV+CNNGGT 
Sbjct: 87  GGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWRNSVRLGCAKVRCNNGGTI 146

Query: 148 ITCNYDPQGNFIGEWPY 165
           I+CNYDP GN+  + PY
Sbjct: 147 ISCNYDPPGNYANQKPY 161

[Close]

BLAST of Sed0009497.1 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 4.1e-52
Identity = 94/156 (60.26%), Postives = 118/156 (75.64%), Query Frame = 0


Query: 9   WLSLFCVLLSTSMLPGSVGQDSPQDYVDAHNVARAQVGVEPIEWDEEVANYARQYANERS 68
           +L +F  L+   +LP S  QDSPQDY+  HN AR  VGV P++WDE VA YAR YA +  
Sbjct: 9   FLIVFVALVGALVLP-SKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLR 68

Query: 69  NDCQLLHSSGPYGENLAKHGGEMSGVEAVQMWVNEQQFYDYPSNTCVDNKMCGHYTQVVW 128
            +C+L+HS GPYGENLA   G++SGV AV MWV+E+  Y+Y +NTC  N +CGHYTQVVW
Sbjct: 69  GNCRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVW 128

Query: 129 RNSVRVGCAKVKCNNGGTFITCNYDPQGNFIGEWPY 165
           R SVR+GCAKV+CNNGGT I+CNYDP+GN++ E PY
Sbjct: 129 RKSVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Sed0009497.1 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.0e-51
Identity = 87/138 (63.04%), Postives = 113/138 (81.88%), Query Frame = 0


Query: 28  QDSPQDYVDAHNVARAQVGVEPIEWDEEVANYARQYANERSNDCQLLHSSGPYGENLAKH 87
           Q+S QDY+DAHN ARA VGVEP+ WD++VA YA+ YA++ + DC L+HS G YGENLA+ 
Sbjct: 31  QNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLVHSHGQYGENLAEG 90

Query: 88  GGE-MSGVEAVQMWVNEQQFYDYPSNTCVDNKMCGHYTQVVWRNSVRVGCAKVKCNNGGT 147
            G+ M+  +AV+MWV+E+Q+YD+ SNTC   ++CGHYTQVVWRNSVRVGCA+V+CNNGG 
Sbjct: 91  SGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSVRVGCARVQCNNGGY 150

Query: 148 FITCNYDPQGNFIGEWPY 165
            ++CNYDP GN+ GE PY
Sbjct: 151 VVSCNYDPPGNYRGESPY 168

[Close]

BLAST of Sed0009497.1 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.3e-50
Identity = 95/168 (56.55%), Postives = 120/168 (71.43%), Query Frame = 0


Query: 1   MGVVIIKLWLSLFCV---LLSTSMLPGSVGQDSPQDYVDAHNVARAQVGVEPIEWDEEVA 60
           MG  +     S F V   LL   +   S  Q+S QDY+DAHN ARA VGVEP+ WD  VA
Sbjct: 1   MGFFLFSQMPSFFLVSTLLLFLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVA 60

Query: 61  NYARQYANERSNDCQLLHSSGPYGENLAKHGGE-MSGVEAVQMWVNEQQFYDYPSNTCVD 120
            YA+ Y ++ + DC L+HS G YGENLA+  G+ M+  +AV+MWV+E+Q+YD+ SNTC  
Sbjct: 61  AYAQNYVSQLAADCNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQ 120

Query: 121 NKMCGHYTQVVWRNSVRVGCAKVKCNNGGTFITCNYDPQGNFIGEWPY 165
            ++CGHYTQVVWRNSVRVGCA+VKCNNGG  ++CNYDP GN IG+ PY
Sbjct: 121 GQVCGHYTQVVWRNSVRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

[Close]

BLAST of Sed0009497.1 vs. ExPASy Swiss-Prot
Match: P09042 (Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3)

HSP 1 Score: 199.5 bits (506), Expect = 2.9e-50
Identity = 86/138 (62.32%), Postives = 111/138 (80.43%), Query Frame = 0


Query: 28  QDSPQDYVDAHNVARAQVGVEPIEWDEEVANYARQYANERSNDCQLLHSSGPYGENLAKH 87
           Q+S QDY+DAHN ARA VGVEP+ WD++VA YA+ YA++ + DC L+HS G YGENLA  
Sbjct: 31  QNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLVHSHGQYGENLAWG 90

Query: 88  GGE-MSGVEAVQMWVNEQQFYDYPSNTCVDNKMCGHYTQVVWRNSVRVGCAKVKCNNGGT 147
            G+ ++  +AV+MWVNE+Q+Y + SNTC   ++CGHYTQVVWRNSVRVGCA+V+CNNGG 
Sbjct: 91  SGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVCGHYTQVVWRNSVRVGCARVQCNNGGY 150

Query: 148 FITCNYDPQGNFIGEWPY 165
            ++CNYDP GN IG+ PY
Sbjct: 151 IVSCNYDPPGNVIGKSPY 168

[Close]

BLAST of Sed0009497.1 vs. ExPASy TrEMBL
Match: A0A6J1GJF8 (pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111454909 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.0e-69
Identity = 122/165 (73.94%), Postives = 142/165 (86.06%), Query Frame = 0


Query: 5   IIKLWLSLFCVLLSTSMLPGSVGQDSPQDYVDAHNVARA-----QVGVEPIEWDEEVANY 64
           ++K+ LSLFCV   T +LP S+ QDSPQDYVDAHN+AR+     QVG++PI+WDEE+ANY
Sbjct: 3   LVKISLSLFCVFCIT-ILPSSLAQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELANY 62

Query: 65  ARQYANERSNDCQLLHSSGPYGENLAKHGGEMSGVEAVQMWVNEQQFYDYPSNTCVDNKM 124
           A QYANERSNDCQLLHS+GPYGENLA H  EM+G+EAVQMWV+EQQFYDY SNTC + KM
Sbjct: 63  ATQYANERSNDCQLLHSNGPYGENLAVHSSEMTGIEAVQMWVDEQQFYDYASNTCTEGKM 122

Query: 125 CGHYTQVVWRNSVRVGCAKVKCNNGGTFITCNYDPQGNFIGEWPY 165
           CGHYTQVVW+N+ +VGCAKV+CNNGG FITCNYDP GN IGEWPY
Sbjct: 123 CGHYTQVVWQNTTKVGCAKVRCNNGGKFITCNYDPPGNVIGEWPY 166

[Close]

BLAST of Sed0009497.1 vs. ExPASy TrEMBL
Match: A0A6J1GL40 (pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111455249 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.2e-69
Identity = 119/165 (72.12%), Postives = 142/165 (86.06%), Query Frame = 0


Query: 5   IIKLWLSLFCVLLSTSMLPGSVGQDSPQDYVDAHNVARA-----QVGVEPIEWDEEVANY 64
           ++K+  SLFC+   T +LP S+ QD PQDYVDAHN+AR+     QVG++PI+WDEE+ANY
Sbjct: 3   LVKISFSLFCIFCIT-ILPSSLAQDFPQDYVDAHNIARSQVSAVQVGIKPIQWDEELANY 62

Query: 65  ARQYANERSNDCQLLHSSGPYGENLAKHGGEMSGVEAVQMWVNEQQFYDYPSNTCVDNKM 124
           A +YANERSNDCQLLHS+GPYGENLA H  EM+G+EAVQMWV+EQQFYDY SNTC++ KM
Sbjct: 63  ATEYANERSNDCQLLHSNGPYGENLAMHSSEMTGIEAVQMWVDEQQFYDYASNTCIEGKM 122

Query: 125 CGHYTQVVWRNSVRVGCAKVKCNNGGTFITCNYDPQGNFIGEWPY 165
           CGHYTQVVW+N+ +VGCAKV+CNNGGTFITCNYDP GN IGEWPY
Sbjct: 123 CGHYTQVVWQNTTKVGCAKVRCNNGGTFITCNYDPPGNIIGEWPY 166

[Close]

BLAST of Sed0009497.1 vs. ExPASy TrEMBL
Match: A0A6J1GMA0 (pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111455250 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.8e-69
Identity = 120/165 (72.73%), Postives = 141/165 (85.45%), Query Frame = 0


Query: 5   IIKLWLSLFCVLLSTSMLPGSVGQDSPQDYVDAHNVARA-----QVGVEPIEWDEEVANY 64
           ++K+  SLFC+   T +LP S+ QD PQDYVDAHN+AR+     QVG++PI+WDEE+ANY
Sbjct: 3   LVKISFSLFCIFCIT-ILPSSLAQDFPQDYVDAHNIARSQVSAVQVGIKPIQWDEELANY 62

Query: 65  ARQYANERSNDCQLLHSSGPYGENLAKHGGEMSGVEAVQMWVNEQQFYDYPSNTCVDNKM 124
           A QYANERSNDCQLLHS+GPYGENLA H  EM+G+EAVQMWV+EQQFYDY SNTC + KM
Sbjct: 63  ATQYANERSNDCQLLHSNGPYGENLAVHSSEMTGIEAVQMWVDEQQFYDYASNTCTEGKM 122

Query: 125 CGHYTQVVWRNSVRVGCAKVKCNNGGTFITCNYDPQGNFIGEWPY 165
           CGHYTQVVW+N+ +VGCAKV+CNNGGTFITCNYDP GN IGEWPY
Sbjct: 123 CGHYTQVVWQNTTKVGCAKVRCNNGGTFITCNYDPPGNVIGEWPY 166

[Close]

BLAST of Sed0009497.1 vs. ExPASy TrEMBL
Match: A0A6J1I350 (pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470565 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.6e-67
Identity = 118/158 (74.68%), Postives = 135/158 (85.44%), Query Frame = 0


Query: 12  LFCVLLSTSMLPGSVGQDSPQDYVDAHNVARA-----QVGVEPIEWDEEVANYARQYANE 71
           LFCV   T +LP S+ QDSPQ YVDAHN+AR+     QVG++PI+WDEE+ANYA QYANE
Sbjct: 32  LFCVFCIT-ILPSSLAQDSPQHYVDAHNIARSQVSAVQVGIKPIQWDEELANYATQYANE 91

Query: 72  RSNDCQLLHSSGPYGENLAKHGGEMSGVEAVQMWVNEQQFYDYPSNTCVDNKMCGHYTQV 131
           RSNDCQLLHS+GPYGENLA H  EM+G+EAVQMWV+EQQFYDY SNTC + KMC HYTQV
Sbjct: 92  RSNDCQLLHSNGPYGENLAMHPSEMTGIEAVQMWVDEQQFYDYASNTCTEGKMCSHYTQV 151

Query: 132 VWRNSVRVGCAKVKCNNGGTFITCNYDPQGNFIGEWPY 165
           VW+N+ +VGCAKV+CNNGGTFITCNYDP GN IGEWPY
Sbjct: 152 VWQNTTKVGCAKVRCNNGGTFITCNYDPPGNVIGEWPY 188

[Close]

BLAST of Sed0009497.1 vs. ExPASy TrEMBL
Match: A0A6J1I6X6 (pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470559 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.6e-67
Identity = 121/169 (71.60%), Postives = 142/169 (84.02%), Query Frame = 0


Query: 1   MGVVIIKLWLSLFCVLLSTSMLPGSVGQDSPQDYVDAHNVARA-----QVGVEPIEWDEE 60
           MG+V I L+   FC+    ++LP S+ QDSPQ YVDAHN+AR+     QVG++PI+WDEE
Sbjct: 1   MGLVKIFLFCG-FCI----TILPSSLAQDSPQHYVDAHNIARSQVSAVQVGIKPIQWDEE 60

Query: 61  VANYARQYANERSNDCQLLHSSGPYGENLAKHGGEMSGVEAVQMWVNEQQFYDYPSNTCV 120
           +ANYA QYANERSNDCQLLHS+GPYGENLA H  EM+G+EAVQMWV+EQQFYDY SNTC 
Sbjct: 61  LANYATQYANERSNDCQLLHSNGPYGENLAMHPSEMTGIEAVQMWVDEQQFYDYASNTCT 120

Query: 121 DNKMCGHYTQVVWRNSVRVGCAKVKCNNGGTFITCNYDPQGNFIGEWPY 165
           + KMCGHYTQVVW+N+ +VGCAKV+CNNGGTFITCNYDP GN IGEWPY
Sbjct: 121 EGKMCGHYTQVVWQNTTKVGCAKVRCNNGGTFITCNYDPPGNVIGEWPY 164

[Close]

BLAST of Sed0009497.1 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 218.0 bits (554), Expect = 5.6e-57
Identity = 95/137 (69.34%), Postives = 110/137 (80.29%), Query Frame = 0


Query: 28  QDSPQDYVDAHNVARAQVGVEPIEWDEEVANYARQYANERSNDCQLLHSSGPYGENLAKH 87
           QDSPQD++  HN ARA+VGV P+ WDE+VA YAR YAN+R  DC + HSSG YGEN+A  
Sbjct: 27  QDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSSGSYGENIAWS 86

Query: 88  GGEMSGVEAVQMWVNEQQFYDYPSNTCVDNKMCGHYTQVVWRNSVRVGCAKVKCNNGGTF 147
            G M+GV AV MWV+EQ  YDY SNTC  +K CGHYTQVVWRNS R+GCAKV+CNNG TF
Sbjct: 87  SGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGCAKVRCNNGQTF 146

Query: 148 ITCNYDPQGNFIGEWPY 165
           ITCNYDP GN++GEWPY
Sbjct: 147 ITCNYDPPGNWVGEWPY 163

[Close]

BLAST of Sed0009497.1 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 211.1 bits (536), Expect = 6.9e-55
Identity = 92/137 (67.15%), Postives = 113/137 (82.48%), Query Frame = 0


Query: 28  QDSPQDYVDAHNVARAQVGVEPIEWDEEVANYARQYANERSNDCQLLHSSGPYGENLAKH 87
           QDS QDYV+AHN AR+Q+GV P++WDE +A YAR YAN+   DC+L+HS GPYGENLAK 
Sbjct: 27  QDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAKS 86

Query: 88  GGEMSGVEAVQMWVNEQQFYDYPSNTCVDNKMCGHYTQVVWRNSVRVGCAKVKCNNGGTF 147
           GG++SGV AV +WVNE+  Y+Y +NTC  N +CGHYTQVVWRNSVR+GCAKV+CNNGGT 
Sbjct: 87  GGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWRNSVRLGCAKVRCNNGGTI 146

Query: 148 ITCNYDPQGNFIGEWPY 165
           I+CNYDP GN+  + PY
Sbjct: 147 ISCNYDPPGNYANQKPY 161

[Close]

BLAST of Sed0009497.1 vs. TAIR 10
Match: AT3G19690.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 208.4 bits (529), Expect = 4.4e-54
Identity = 90/151 (59.60%), Postives = 119/151 (78.81%), Query Frame = 0


Query: 16  LLSTSMLPGSVGQDSPQDYVDAHNVARAQVGVEPIEWDEEVANYARQYANERSNDCQLLH 75
           LL+ ++  GS+ +D  Q +++AHN AR +VG++P+ WD+EVA YA  YAN+R NDC L+H
Sbjct: 11  LLAIALFYGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQRINDCALVH 70

Query: 76  SSGPYGENLAKHGGEMSGVEAVQMWVNEQQFYDYPSNTCVD--NKMCGHYTQVVWRNSVR 135
           S+GP+GEN+A   GEMS  +A +MW+NE+Q+YDY SNTC D     C HYTQVVW+N+VR
Sbjct: 71  SNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQVVWKNTVR 130

Query: 136 VGCAKVKCNNGGTFITCNYDPQGNFIGEWPY 165
           +GCAKV CN+GGTFITCNYDP GN+IGE P+
Sbjct: 131 LGCAKVVCNSGGTFITCNYDPPGNYIGEKPF 161

[Close]

BLAST of Sed0009497.1 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 205.7 bits (522), Expect = 2.9e-53
Identity = 94/156 (60.26%), Postives = 118/156 (75.64%), Query Frame = 0


Query: 9   WLSLFCVLLSTSMLPGSVGQDSPQDYVDAHNVARAQVGVEPIEWDEEVANYARQYANERS 68
           +L +F  L+   +LP S  QDSPQDY+  HN AR  VGV P++WDE VA YAR YA +  
Sbjct: 9   FLIVFVALVGALVLP-SKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLR 68

Query: 69  NDCQLLHSSGPYGENLAKHGGEMSGVEAVQMWVNEQQFYDYPSNTCVDNKMCGHYTQVVW 128
            +C+L+HS GPYGENLA   G++SGV AV MWV+E+  Y+Y +NTC  N +CGHYTQVVW
Sbjct: 69  GNCRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVW 128

Query: 129 RNSVRVGCAKVKCNNGGTFITCNYDPQGNFIGEWPY 165
           R SVR+GCAKV+CNNGGT I+CNYDP+GN++ E PY
Sbjct: 129 RKSVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Sed0009497.1 vs. TAIR 10
Match: AT5G26130.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 195.3 bits (495), Expect = 3.9e-50
Identity = 88/139 (63.31%), Postives = 100/139 (71.94%), Query Frame = 0


Query: 28  QDSPQDYVDAHNVARAQVGVEPIEWDEEVANYARQYANERSNDCQLLH--SSGPYGENLA 87
           QD PQDY+D HN AR QVGV P++W      YA  YA +R  DC L H  S+G YGENLA
Sbjct: 28  QDQPQDYLDEHNRARTQVGVPPMKWHAGAEQYAWNYAQQRKGDCSLTHSNSNGLYGENLA 87

Query: 88  KHGGEMSGVEAVQMWVNEQQFYDYPSNTCVDNKMCGHYTQVVWRNSVRVGCAKVKCNNGG 147
             GG +SG EAV++WVNE+  Y Y SNTC D K CGHYTQVVWR S  VGCAKVKC+NGG
Sbjct: 88  WSGGALSGAEAVKLWVNEKSDYIYASNTCSDGKQCGHYTQVVWRTSEWVGCAKVKCDNGG 147

Query: 148 TFITCNYDPQGNFIGEWPY 165
           TF+TCNY P GN+ G WPY
Sbjct: 148 TFVTCNYYPPGNYRGRWPY 166

The following BLAST results are available for this feature:

BLAST of Sed0009497.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952146.1	2.1e-69	73.94	pathogenesis-related protein 1-like [Cucurbita moschata]	[more]
XP_023511466.1	2.7e-69	73.94	pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023511498.1	2.7e-69	73.33	pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022952613.1	4.6e-69	72.12	pathogenesis-related protein 1-like [Cucurbita moschata]	[more]
XP_023511465.1	6.0e-69	73.33	pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0009497.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZNS4	9.6e-54	67.15	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1	[more]
P33154	4.1e-52	60.26	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1...	[more]
P08299	2.0e-51	63.04	Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]
P07053	1.3e-50	56.55	Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P09042	2.9e-50	62.32	Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3	[more]

BLAST of Sed0009497.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GJF8	1.0e-69	73.94	pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145490...	[more]
A0A6J1GL40	2.2e-69	72.12	pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145524...	[more]
A0A6J1GMA0	3.8e-69	72.73	pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145525...	[more]
A0A6J1I350	4.6e-67	74.68	pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470565 ...	[more]
A0A6J1I6X6	4.6e-67	71.60	pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470559 ...	[more]

BLAST of Sed0009497.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33720.1	5.6e-57	69.34	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14580.1	6.9e-55	67.15	basic pathogenesis-related protein 1	[more]
AT3G19690.1	4.4e-54	59.60	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14610.1	2.9e-53	60.26	pathogenesis-related gene 1	[more]
AT5G26130.1	3.9e-50	63.31	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002413	Venom allergen 5-like	PRINTS	PR00838	V5ALLERGEN	coord: 50..68 score: 31.91 coord: 119..138 score: 47.5
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 120..136 score: 65.39 coord: 50..68 score: 34.24 coord: 96..109 score: 42.33 coord: 147..160 score: 52.86
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 25..164
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 29..160 e-value: 3.7E-63 score: 225.8
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 35..152 e-value: 5.3E-23 score: 82.2
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 29..164 e-value: 6.0E-45 score: 154.9
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 10..164
None	No IPR available	PANTHER	PTHR10334:SF488	PATHOGENESIS-RELATED PROTEIN 1	coord: 25..164
None	No IPR available	CDD	cd05381	CAP_PR-1	coord: 31..164 e-value: 3.42935E-85 score: 244.465
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 121..131
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 147..158

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0009497	Sed0009497	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009497.1-exon	Sed0009497.1-exon-LG10:34147423..34147949	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009497.1-cds	Sed0009497.1-cds-LG10:34147423..34147917	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009497.1-five_prime_utr	Sed0009497.1-five_prime_utr-LG10:34147918..34147949	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0009497.1	Sed0009497.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0005615	extracellular space