Sed0009111.1 (mRNA) Chayote v1

Overview


Name	Sed0009111.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Ras guanine nucleotide exchange factor Q-like protein
Location	LG08: 3271445 .. 3274711 (+)
Sequence length	1169
RNA-Seq Expression	Sed0009111.1
Synteny	Sed0009111.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGATGATGAGGCCAACCCACTATACAATATTACATAAACAAAGAAAAAAGAAAACACATTCCAAACCAGCTTTTGTTGTTGCCTAGCTCCCCTCCATTCACAGGCTGTCAAAACCTGAATTATTAACAGCAGGGATTTTATAATTTATTAGTCAGAGAGGTGTTTGCTTTATTGTTTCTTCCTCAAAGTAAAGCAAACAAGAGGCTGGATTTTGTCCTTTCAAAAGGAAAGAAGCTTTGAGTTTTAGTTTGAGAGATTCAGGCATTATTATTATTATTATTTATGTGGATATATTTTTGGGGCACTCAATTTATTTTGATCAACAAAGCATTGGTATGAGGAACAAAGCTGAAAATGTTCAATGAGTATCACAGCCTCTTTCTATATCAGGTCATTTCTTCATTTTCTCAATTCTTTTCATTCTGTTTCCTACTTTTTCTTTAGAGTTTTTACCTTTTTTATTGTTTTGTTTAAATTTCTTTCTGGGATTTTGAAAGATTTTTGGAAAATCAATAATGCTCCTCAAATTTGATCTCCATGTTGCTGGGATTGCTCCATATCTGTCATTTTATGCACCATTTCTCTCTGCTGAAACTTCTAAACAATTTCCCAATTACAATGCTTAGGCTTGCCTTTTAGCCTATACTTAAGTCTTACAATTCCGTCGTAGCCCTATAATCTAGTAATCACGAGGTTACGGATTTGAATTTCTGCTCCAAATGTTGTTGAAAAAAAAATCCTACGATTCTCAGACAGAATAAACTTTTTCTTTCAATTAACCTTTGTGGAAAATTTCTCAAATAGAGTTGAATTTTTTTTTCTTGTGGGAAGAAACAAGAGGAAATGGACAGATTTTTGTTGAGTAAATTTAACTGTAATTTTAATGTATTTGGAATAATTGTTAAATTAAGAAATTAGTGGGTAAACAATTAAGAAATTAATGGGTTGCCAATTTAGGAACTAATTAAGAAATTAATGGATCCTTCCCACTAATAGTAAGAACTAGAAGACCAAATTTTGTAATAGGCTAAGAACAGAGTATTCATTCCATAGAGCAAAGTGTGAGAAAATAAAAGAGAGCAAGCAAGAGAATCGTAGAGAGAGTAATTGAAAAATGAAGAAAAAATGTTCATAGAGAATTTATTGTGTGCATTGTCTCTCCAATTCTAAAGCTAAAAGCTTGCACGTTTGTGACTTAGTTTTTACAATTTTTATGTCACCAAATATTGAGAGAGAGATCTACACATCCTTTTTTTCCTGCATTGTTTCTTTACTATTTGATTGTGCTTTTCCAAGATCTAGAAACCATAAAATCCCTGAAATTGTAGCATCTTTTTTTCTTCTAGACTAGCTAGCCTAAGCCTATACTATATATATTATATAATTTAAGGGACCACTGAAATTGATGTTGGTATTAAGAAACCAAGTATCATACGTATTGGGGATGAGTCCCTCCATCTATATTTATTTGGATTGGCTAATAATTTGACATTTGGCTCATCATAATTGGCTCCATTACATGTTAGATTGGAAATTTGAAGTTGATGCATTTCTAAATTCTGCATAAGACAGTAGAAATTGGTCAACAAGACTATGTCTCACTAGTGGAAAGAAAGGGAAAGAAAGAAAGATTCTACTTAATTGTTTTATTATATTTGTGGGTGTCGAATGTCAACTTAGGCACACTCTAACTATTTTCATGCAATTTACTGTCTGACTCTAATGTATTTGAATGTCAAAAAATTCGGTAAGAAATTATTTTTAGGTTATAATGAATTGACCTTATAACCTCCTAGATCTTTAATGTCCTATTTGACCATTAGGCGAACCTATGAGGAATGTTTCTACATAATTGACTTTTCTTTTTTGTCTAAAATTTCTTTGTGGGTTTGAAGAATGTTTTGCCAAAGGTATGGCTTTGTTGTCAAACATTTTCTTGACACCCATTTGATTTTCAGGCATGGGAACAAGATTTGAAGTTAATTTCAATCCTTTAGCCACCTCTGCTCACAGCAGCAACATATTTACAGTTCAAAAAGTGAATGAGTGGCACCATTTTCAGGACTACTCAACAAGGAAGCCTCCCCAAAAAGTCTTGACATCTGCTAATGTAATGAGTACTGGACTTGAAAAGTTTCAAGAACCTATGAAAAAGGTGTTGCAAAAAGAAGATATGAATGTCATTAAGAAGACAATGCAGATTCATGAACATGTCTTCAAGAATCAGGTAATAGAGACAAGTCTTTTTAACTTTTCAAACCAATTTGATAGAATTTCAAGATGAGACAGTTTGATCAGTTTTCTGTTGGGTTTTTTCACTTGTGGAAGGCCCAACGACTAATGGGCCTTTATGTGGGCCTTCCACGAGTAAAAAACACTAACAAATCTTTCCCTATTTATTCCAAAGTTAAAAGTATAGATATATTACGTGGATGAAAGATGCAATGACGGTTTGTTTGAGCTACAAACATACATATAAATAATAATGAATTCGATATGTTGATTTAAAAATCTATCAAGAAAGAAACTTGAGTTTTGTCGTTTCACTACTGAAATGGCAAGTTCTTCCCGACAGTAAAGGGAGAGATTTGTTGGGTTTTTCGTCTTACATAAAGACCAATTAAGGCTATAGTTCTTATATATATATATATATATATTGACTTTTTGACATTTTTTATTTTACCTAGAAACACAAGAAAAACAATTAGAAAAGCTTCCAAAATTTGTGTTTCATTTGTTGAAGTTAATTCTTTGTAGGTGAAGGAACTCCATAGGTTGTATAATGTTCAGAAAATGCTGATGGAAGAGAAGAGGAAAGAAAGCAACCAAAACACATTAAGTTCAAGTGGAGGAGTGGGGCTGAAACTCAATCTTCAAAGCATGAGAGAGAGAAGTGGAAGCTGTTCTGGAGACAACAACATGAGAATGTCAAGAGGATTTGATCTTGAGAGGCTGGCAGCGGAGGACATGTCGACTGGGGTTAGCACTGTCGACGAAGAACAAGCCGGGCCGAGCACTTCGATTGTCGGTAAAGAAGAGGGTGATGTTGAGCTGAGTCTAAGTATTGGTGGTGGTAGTACTCTAAGCAAGAAGAGATCAAAATCCTTTGTAATTCAAAAGAAAAGAGAGATTGATTCATGTTTGTCATTCAAATCAGAAAGAGGAGAAGAGTGCAGTGATCCAATGAGCAGCTCAAGTGCAAGTTGTGATCAGGAAACAAAACGGCCACATTGGCTTTTCCAAAGTTTAAAGCTTAAGTAGAATT

mRNA sequence

GTTGATGATGAGGCCAACCCACTATACAATATTACATAAACAAAGAAAAAAGAAAACACATTCCAAACCAGCTTTTGTTGTTGCCTAGCTCCCCTCCATTCACAGGCTGTCAAAACCTGAATTATTAACAGCAGGGATTTTATAATTTATTAGTCAGAGAGGTGTTTGCTTTATTGTTTCTTCCTCAAAGTAAAGCAAACAAGAGGCTGGATTTTGTCCTTTCAAAAGGAAAGAAGCTTTGAGTTTTAGTTTGAGAGATTCAGGCATTATTATTATTATTATTTATGTGGATATATTTTTGGGGCACTCAATTTATTTTGATCAACAAAGCATTGGTATGAGGAACAAAGCTGAAAATGTTCAATGAGTATCACAGCCTCTTTCTATATCAGGCATGGGAACAAGATTTGAAGTTAATTTCAATCCTTTAGCCACCTCTGCTCACAGCAGCAACATATTTACAGTTCAAAAAGTGAATGAGTGGCACCATTTTCAGGACTACTCAACAAGGAAGCCTCCCCAAAAAGTCTTGACATCTGCTAATGTAATGAGTACTGGACTTGAAAAGTTTCAAGAACCTATGAAAAAGGTGTTGCAAAAAGAAGATATGAATGTCATTAAGAAGACAATGCAGATTCATGAACATGTCTTCAAGAATCAGGTGAAGGAACTCCATAGGTTGTATAATGTTCAGAAAATGCTGATGGAAGAGAAGAGGAAAGAAAGCAACCAAAACACATTAAGTTCAAGTGGAGGAGTGGGGCTGAAACTCAATCTTCAAAGCATGAGAGAGAGAAGTGGAAGCTGTTCTGGAGACAACAACATGAGAATGTCAAGAGGATTTGATCTTGAGAGGCTGGCAGCGGAGGACATGTCGACTGGGGTTAGCACTGTCGACGAAGAACAAGCCGGGCCGAGCACTTCGATTGTCGGTAAAGAAGAGGGTGATGTTGAGCTGAGTCTAAGTATTGGTGGTGGTAGTACTCTAAGCAAGAAGAGATCAAAATCCTTTGTAATTCAAAAGAAAAGAGAGATTGATTCATGTTTGTCATTCAAATCAGAAAGAGGAGAAGAGTGCAGTGATCCAATGAGCAGCTCAAGTGCAAGTTGTGATCAGGAAACAAAACGGCCACATTGGCTTTTCCAAAGTTTAAAGCTTAAGTAGAATT

Coding sequence (CDS)

ATGGGAACAAGATTTGAAGTTAATTTCAATCCTTTAGCCACCTCTGCTCACAGCAGCAACATATTTACAGTTCAAAAAGTGAATGAGTGGCACCATTTTCAGGACTACTCAACAAGGAAGCCTCCCCAAAAAGTCTTGACATCTGCTAATGTAATGAGTACTGGACTTGAAAAGTTTCAAGAACCTATGAAAAAGGTGTTGCAAAAAGAAGATATGAATGTCATTAAGAAGACAATGCAGATTCATGAACATGTCTTCAAGAATCAGGTGAAGGAACTCCATAGGTTGTATAATGTTCAGAAAATGCTGATGGAAGAGAAGAGGAAAGAAAGCAACCAAAACACATTAAGTTCAAGTGGAGGAGTGGGGCTGAAACTCAATCTTCAAAGCATGAGAGAGAGAAGTGGAAGCTGTTCTGGAGACAACAACATGAGAATGTCAAGAGGATTTGATCTTGAGAGGCTGGCAGCGGAGGACATGTCGACTGGGGTTAGCACTGTCGACGAAGAACAAGCCGGGCCGAGCACTTCGATTGTCGGTAAAGAAGAGGGTGATGTTGAGCTGAGTCTAAGTATTGGTGGTGGTAGTACTCTAAGCAAGAAGAGATCAAAATCCTTTGTAATTCAAAAGAAAAGAGAGATTGATTCATGTTTGTCATTCAAATCAGAAAGAGGAGAAGAGTGCAGTGATCCAATGAGCAGCTCAAGTGCAAGTTGTGATCAGGAAACAAAACGGCCACATTGGCTTTTCCAAAGTTTAAAGCTTAAGTAG

Protein sequence

MGTRFEVNFNPLATSAHSSNIFTVQKVNEWHHFQDYSTRKPPQKVLTSANVMSTGLEKFQEPMKKVLQKEDMNVIKKTMQIHEHVFKNQVKELHRLYNVQKMLMEEKRKESNQNTLSSSGGVGLKLNLQSMRERSGSCSGDNNMRMSRGFDLERLAAEDMSTGVSTVDEEQAGPSTSIVGKEEGDVELSLSIGGGSTLSKKRSKSFVIQKKREIDSCLSFKSERGEECSDPMSSSSASCDQETKRPHWLFQSLKLK

Homology

[Close]

BLAST of Sed0009111.1 vs. NCBI nr
Match: XP_022932988.1 (uncharacterized protein LOC111439615 isoform X1 [Cucurbita moschata])

HSP 1 Score: 308.9 bits (790), Expect = 4.0e-80
Identity = 192/298 (64.43%), Postives = 213/298 (71.48%), Query Frame = 0


Query: 1   MGTRFEVNFNPL-ATSAH--SSNIFTVQKVNEWHHFQDYSTRKPPQKVLTSANVMSTGLE 60
           MGTRFE  FNPL  TSAH  SSN FTVQ+VNEW HFQ YST     K  T++  MSTGL+
Sbjct: 16  MGTRFEPTFNPLPTTSAHSSSSNAFTVQRVNEWQHFQGYST-----KFYTTSAAMSTGLD 75

Query: 61  KFQEPMKKVLQKEDMNVIKKTMQIHEHVFKNQVKELHRLYNVQKMLMEEKRKESNQNTLS 120
           KFQE + K+LQK D+  IK TMQ+H++VFKNQVKELHRLY+VQKMLMEE RKE+ QNTL 
Sbjct: 76  KFQEALNKMLQKGDVEAIKNTMQLHDNVFKNQVKELHRLYSVQKMLMEELRKETKQNTLG 135

Query: 121 S---------------------SGGVGLKLNLQ-SMRERSGSCSGDNNMRMSRGFDLERL 180
           S                     + G GL  NL  S RERSGSCSGD NMRMSRGFDLER 
Sbjct: 136 SPMASSGINHLQFNNRETSTTQTAGEGLIFNLDPSSRERSGSCSGD-NMRMSRGFDLERP 195

Query: 181 AAEDMSTGVSTVDEEQAGPSTSIVGK------------EEGDVELSLSIGGGSTLSKKRS 240
           A EDMSTG+STVDE+QA PST  + +            E+ DVEL+LSIGGGS LSKKRS
Sbjct: 196 AEEDMSTGISTVDEDQARPSTPTIARKSNKMQCIDGCEEDSDVELTLSIGGGS-LSKKRS 255

Query: 241 KSF--VIQKKREIDSCLSFKSERGEECSD---PMSSSSASCDQETKRPHWLFQSLKLK 257
           KSF  +  K REIDS LSFKSERGEECSD   PMSSSSA+CDQETKRPHWLFQSLKLK
Sbjct: 256 KSFPPITHKDREIDSSLSFKSERGEECSDPTTPMSSSSATCDQETKRPHWLFQSLKLK 306

[Close]

BLAST of Sed0009111.1 vs. NCBI nr
Match: XP_022932994.1 (uncharacterized protein LOC111439615 isoform X2 [Cucurbita moschata])

HSP 1 Score: 308.9 bits (790), Expect = 4.0e-80
Identity = 192/298 (64.43%), Postives = 213/298 (71.48%), Query Frame = 0


Query: 1   MGTRFEVNFNPL-ATSAH--SSNIFTVQKVNEWHHFQDYSTRKPPQKVLTSANVMSTGLE 60
           MGTRFE  FNPL  TSAH  SSN FTVQ+VNEW HFQ YST     K  T++  MSTGL+
Sbjct: 1   MGTRFEPTFNPLPTTSAHSSSSNAFTVQRVNEWQHFQGYST-----KFYTTSAAMSTGLD 60

Query: 61  KFQEPMKKVLQKEDMNVIKKTMQIHEHVFKNQVKELHRLYNVQKMLMEEKRKESNQNTLS 120
           KFQE + K+LQK D+  IK TMQ+H++VFKNQVKELHRLY+VQKMLMEE RKE+ QNTL 
Sbjct: 61  KFQEALNKMLQKGDVEAIKNTMQLHDNVFKNQVKELHRLYSVQKMLMEELRKETKQNTLG 120

Query: 121 S---------------------SGGVGLKLNLQ-SMRERSGSCSGDNNMRMSRGFDLERL 180
           S                     + G GL  NL  S RERSGSCSGD NMRMSRGFDLER 
Sbjct: 121 SPMASSGINHLQFNNRETSTTQTAGEGLIFNLDPSSRERSGSCSGD-NMRMSRGFDLERP 180

Query: 181 AAEDMSTGVSTVDEEQAGPSTSIVGK------------EEGDVELSLSIGGGSTLSKKRS 240
           A EDMSTG+STVDE+QA PST  + +            E+ DVEL+LSIGGGS LSKKRS
Sbjct: 181 AEEDMSTGISTVDEDQARPSTPTIARKSNKMQCIDGCEEDSDVELTLSIGGGS-LSKKRS 240

Query: 241 KSF--VIQKKREIDSCLSFKSERGEECSD---PMSSSSASCDQETKRPHWLFQSLKLK 257
           KSF  +  K REIDS LSFKSERGEECSD   PMSSSSA+CDQETKRPHWLFQSLKLK
Sbjct: 241 KSFPPITHKDREIDSSLSFKSERGEECSDPTTPMSSSSATCDQETKRPHWLFQSLKLK 291

[Close]

BLAST of Sed0009111.1 vs. NCBI nr
Match: KAG6587737.1 (hypothetical protein SDJN03_16302, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 308.9 bits (790), Expect = 4.0e-80
Identity = 192/298 (64.43%), Postives = 213/298 (71.48%), Query Frame = 0


Query: 1   MGTRFEVNFNPL-ATSAH--SSNIFTVQKVNEWHHFQDYSTRKPPQKVLTSANVMSTGLE 60
           MGTRFE  FNPL  TSAH  SSN FTVQ+VNEW HFQ YST     K  T++  MSTGL+
Sbjct: 50  MGTRFEPTFNPLPTTSAHSSSSNAFTVQRVNEWQHFQGYST-----KFYTTSAAMSTGLD 109

Query: 61  KFQEPMKKVLQKEDMNVIKKTMQIHEHVFKNQVKELHRLYNVQKMLMEEKRKESNQNTLS 120
           KFQE + K+LQK D+  IK TMQ+H++VFKNQVKELHRLY+VQKMLMEE RKE+ QNTL 
Sbjct: 110 KFQEALNKMLQKGDVEAIKNTMQLHDNVFKNQVKELHRLYSVQKMLMEELRKETKQNTLG 169

Query: 121 S---------------------SGGVGLKLNLQ-SMRERSGSCSGDNNMRMSRGFDLERL 180
           S                     + G GL  NL  S RERSGSCSGD NMRMSRGFDLER 
Sbjct: 170 SPMASSGINHLQFNNRETSTTQTAGEGLIFNLDPSSRERSGSCSGD-NMRMSRGFDLERP 229

Query: 181 AAEDMSTGVSTVDEEQAGPSTSIVGK------------EEGDVELSLSIGGGSTLSKKRS 240
           A EDMSTG+STVDE+QA PST  + +            E+ DVEL+LSIGGGS LSKKRS
Sbjct: 230 AEEDMSTGISTVDEDQARPSTPTIARKSNKMQCIDGCEEDSDVELTLSIGGGS-LSKKRS 289

Query: 241 KSF--VIQKKREIDSCLSFKSERGEECSD---PMSSSSASCDQETKRPHWLFQSLKLK 257
           KSF  +  K REIDS LSFKSERGEECSD   PMSSSSA+CDQETKRPHWLFQSLKLK
Sbjct: 290 KSFPPITHKDREIDSSLSFKSERGEECSDPTTPMSSSSATCDQETKRPHWLFQSLKLK 340

[Close]

BLAST of Sed0009111.1 vs. NCBI nr
Match: KAG7021705.1 (hypothetical protein SDJN02_15432, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 308.5 bits (789), Expect = 5.3e-80
Identity = 192/299 (64.21%), Postives = 213/299 (71.24%), Query Frame = 0


Query: 1   MGTRFEVNFNPL-ATSAH---SSNIFTVQKVNEWHHFQDYSTRKPPQKVLTSANVMSTGL 60
           MGTRFE  FNPL  TSAH   SSN FTVQ+VNEW HFQ YST     K  T++  MSTGL
Sbjct: 16  MGTRFEPTFNPLPTTSAHSSSSSNAFTVQRVNEWQHFQGYST-----KFYTTSAAMSTGL 75

Query: 61  EKFQEPMKKVLQKEDMNVIKKTMQIHEHVFKNQVKELHRLYNVQKMLMEEKRKESNQNTL 120
           +KFQE + K+LQK D+  IK TMQ+H++VFKNQVKELHRLY+VQKMLMEE RKE+ QNTL
Sbjct: 76  DKFQEALNKMLQKGDVEAIKNTMQLHDNVFKNQVKELHRLYSVQKMLMEELRKETKQNTL 135

Query: 121 SS---------------------SGGVGLKLNLQ-SMRERSGSCSGDNNMRMSRGFDLER 180
            S                     + G GL  NL  S RERSGSCSGD NMRMSRGFDLER
Sbjct: 136 GSPMASSGINHLQFNNRETSTTQTAGEGLIFNLDPSSRERSGSCSGD-NMRMSRGFDLER 195

Query: 181 LAAEDMSTGVSTVDEEQAGPSTSIVGK------------EEGDVELSLSIGGGSTLSKKR 240
            A EDMSTG+STVDE+QA PST  + +            E+ DVEL+LSIGGGS LSKKR
Sbjct: 196 PAEEDMSTGISTVDEDQARPSTPTIARKSNKTQCIDGCEEDSDVELTLSIGGGS-LSKKR 255

Query: 241 SKSF--VIQKKREIDSCLSFKSERGEECSD---PMSSSSASCDQETKRPHWLFQSLKLK 257
           SKSF  +  K REIDS LSFKSERGEECSD   PMSSSSA+CDQETKRPHWLFQSLKLK
Sbjct: 256 SKSFPPITHKDREIDSSLSFKSERGEECSDPTTPMSSSSATCDQETKRPHWLFQSLKLK 307

[Close]

BLAST of Sed0009111.1 vs. NCBI nr
Match: XP_023531102.1 (uncharacterized protein LOC111793451 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 306.2 bits (783), Expect = 2.6e-79
Identity = 190/296 (64.19%), Postives = 212/296 (71.62%), Query Frame = 0


Query: 1   MGTRFEVNFNPL-ATSAHSSN-IFTVQKVNEWHHFQDYSTRKPPQKVLTSANVMSTGLEK 60
           MGTR E  FNPL  TSAHSS+  FTVQ+VNEW HFQ YST     K  T++  MSTGL+K
Sbjct: 1   MGTRLEPTFNPLPTTSAHSSSKAFTVQRVNEWQHFQGYST-----KFYTTSAAMSTGLDK 60

Query: 61  FQEPMKKVLQKEDMNVIKKTMQIHEHVFKNQVKELHRLYNVQKMLMEEKRKESNQNTLSS 120
           FQE + K+LQK D+  IK TMQ+H++VFKNQVKELHRLY+VQKMLMEE RKE+ QNTL S
Sbjct: 61  FQEALNKMLQKGDVEAIKNTMQLHDNVFKNQVKELHRLYSVQKMLMEELRKETKQNTLGS 120

Query: 121 ---------------------SGGVGLKLNLQ-SMRERSGSCSGDNNMRMSRGFDLERLA 180
                                + G GL  NL  S RERSGSCSGD NMRMSRGFDLER A
Sbjct: 121 PMASSGINHLQFNNRETSTTQTAGEGLTFNLDPSSRERSGSCSGD-NMRMSRGFDLERPA 180

Query: 181 AEDMSTGVSTVDEEQAGPSTSIVGK-----------EEGDVELSLSIGGGSTLSKKRSKS 240
            EDMSTG+STVDE+QA PST  + +           E+ DVEL+LSIGGGS LSKKRSKS
Sbjct: 181 EEDMSTGISTVDEDQARPSTPTIARKSNKMCIDGCEEDSDVELTLSIGGGS-LSKKRSKS 240

Query: 241 F--VIQKKREIDSCLSFKSERGEECSD---PMSSSSASCDQETKRPHWLFQSLKLK 257
           F  +  K REIDS LSFKSERGEECSD   PMSSSSA+CDQETKRPHWLFQSLKLK
Sbjct: 241 FPPITHKDREIDSSLSFKSERGEECSDPTTPMSSSSATCDQETKRPHWLFQSLKLK 289

[Close]

BLAST of Sed0009111.1 vs. ExPASy TrEMBL
Match: A0A6J1F3D4 (uncharacterized protein LOC111439615 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439615 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 2.0e-80
Identity = 192/298 (64.43%), Postives = 213/298 (71.48%), Query Frame = 0


Query: 1   MGTRFEVNFNPL-ATSAH--SSNIFTVQKVNEWHHFQDYSTRKPPQKVLTSANVMSTGLE 60
           MGTRFE  FNPL  TSAH  SSN FTVQ+VNEW HFQ YST     K  T++  MSTGL+
Sbjct: 16  MGTRFEPTFNPLPTTSAHSSSSNAFTVQRVNEWQHFQGYST-----KFYTTSAAMSTGLD 75

Query: 61  KFQEPMKKVLQKEDMNVIKKTMQIHEHVFKNQVKELHRLYNVQKMLMEEKRKESNQNTLS 120
           KFQE + K+LQK D+  IK TMQ+H++VFKNQVKELHRLY+VQKMLMEE RKE+ QNTL 
Sbjct: 76  KFQEALNKMLQKGDVEAIKNTMQLHDNVFKNQVKELHRLYSVQKMLMEELRKETKQNTLG 135

Query: 121 S---------------------SGGVGLKLNLQ-SMRERSGSCSGDNNMRMSRGFDLERL 180
           S                     + G GL  NL  S RERSGSCSGD NMRMSRGFDLER 
Sbjct: 136 SPMASSGINHLQFNNRETSTTQTAGEGLIFNLDPSSRERSGSCSGD-NMRMSRGFDLERP 195

Query: 181 AAEDMSTGVSTVDEEQAGPSTSIVGK------------EEGDVELSLSIGGGSTLSKKRS 240
           A EDMSTG+STVDE+QA PST  + +            E+ DVEL+LSIGGGS LSKKRS
Sbjct: 196 AEEDMSTGISTVDEDQARPSTPTIARKSNKMQCIDGCEEDSDVELTLSIGGGS-LSKKRS 255

Query: 241 KSF--VIQKKREIDSCLSFKSERGEECSD---PMSSSSASCDQETKRPHWLFQSLKLK 257
           KSF  +  K REIDS LSFKSERGEECSD   PMSSSSA+CDQETKRPHWLFQSLKLK
Sbjct: 256 KSFPPITHKDREIDSSLSFKSERGEECSDPTTPMSSSSATCDQETKRPHWLFQSLKLK 306

[Close]

BLAST of Sed0009111.1 vs. ExPASy TrEMBL
Match: A0A6J1EYH8 (uncharacterized protein LOC111439615 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439615 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 2.0e-80
Identity = 192/298 (64.43%), Postives = 213/298 (71.48%), Query Frame = 0


Query: 1   MGTRFEVNFNPL-ATSAH--SSNIFTVQKVNEWHHFQDYSTRKPPQKVLTSANVMSTGLE 60
           MGTRFE  FNPL  TSAH  SSN FTVQ+VNEW HFQ YST     K  T++  MSTGL+
Sbjct: 1   MGTRFEPTFNPLPTTSAHSSSSNAFTVQRVNEWQHFQGYST-----KFYTTSAAMSTGLD 60

Query: 61  KFQEPMKKVLQKEDMNVIKKTMQIHEHVFKNQVKELHRLYNVQKMLMEEKRKESNQNTLS 120
           KFQE + K+LQK D+  IK TMQ+H++VFKNQVKELHRLY+VQKMLMEE RKE+ QNTL 
Sbjct: 61  KFQEALNKMLQKGDVEAIKNTMQLHDNVFKNQVKELHRLYSVQKMLMEELRKETKQNTLG 120

Query: 121 S---------------------SGGVGLKLNLQ-SMRERSGSCSGDNNMRMSRGFDLERL 180
           S                     + G GL  NL  S RERSGSCSGD NMRMSRGFDLER 
Sbjct: 121 SPMASSGINHLQFNNRETSTTQTAGEGLIFNLDPSSRERSGSCSGD-NMRMSRGFDLERP 180

Query: 181 AAEDMSTGVSTVDEEQAGPSTSIVGK------------EEGDVELSLSIGGGSTLSKKRS 240
           A EDMSTG+STVDE+QA PST  + +            E+ DVEL+LSIGGGS LSKKRS
Sbjct: 181 AEEDMSTGISTVDEDQARPSTPTIARKSNKMQCIDGCEEDSDVELTLSIGGGS-LSKKRS 240

Query: 241 KSF--VIQKKREIDSCLSFKSERGEECSD---PMSSSSASCDQETKRPHWLFQSLKLK 257
           KSF  +  K REIDS LSFKSERGEECSD   PMSSSSA+CDQETKRPHWLFQSLKLK
Sbjct: 241 KSFPPITHKDREIDSSLSFKSERGEECSDPTTPMSSSSATCDQETKRPHWLFQSLKLK 291

[Close]

BLAST of Sed0009111.1 vs. ExPASy TrEMBL
Match: A0A6J1BZ33 (uncharacterized protein LOC111006800 OS=Momordica charantia OX=3673 GN=LOC111006800 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 4.8e-79
Identity = 191/297 (64.31%), Postives = 218/297 (73.40%), Query Frame = 0


Query: 1   MGTRFEVNFNPLATSAHSSN-IFTVQKVNEWHHFQDYSTRKPPQKVLTSANVMSTGLEKF 60
           MGTR E  FNPLATSAHSSN +FTVQ+VNEWHHFQD STR PP K+ T A +   GL+KF
Sbjct: 1   MGTRLEPTFNPLATSAHSSNTLFTVQRVNEWHHFQD-STRLPP-KLHTPAAM--AGLDKF 60

Query: 61  QEPMKKVLQKEDMNVIKKTMQIHEHVFKNQVKELHRLYNVQKMLMEEKRKESNQN----- 120
           QE + K+L K +++ I+ TMQ+HE VFKNQVKELHRLY+VQKMLMEE R+ES QN     
Sbjct: 61  QESVNKMLHKGEVDSIRNTMQVHEDVFKNQVKELHRLYSVQKMLMEELRRESKQNSQWGP 120

Query: 121 -----------------TLSSSGGVGLKLNLQSM------RERSGSCSGDNNMRMSRGFD 180
                            TL S+GG GL  NLQS+      RERSGSCSGD NMR+SRGFD
Sbjct: 121 MASSGTNHLQFNNRENSTLQSAGG-GLIFNLQSLRDDPSSRERSGSCSGD-NMRVSRGFD 180

Query: 181 LERLAA---EDMSTGVSTVDEEQAGPSTSIVGK------EEGDVELSLSIGGGSTLSKKR 240
           LER AA   +DMSTGVSTVDE+QAGPST IVGK      E+GDVEL+LSIGGG +  +  
Sbjct: 181 LERPAAAEDQDMSTGVSTVDEDQAGPSTPIVGKSSKMSIEDGDVELTLSIGGGVSKKRSN 240

Query: 241 SKSFVIQKKREIDSCLSFKSERGEECSD---PMSSSSASCDQETKRPHWLFQSLKLK 257
           S S + QK+ E+DS LSFKSERGEECSD   PMSSSSA+CDQETKRPHWLFQSLKLK
Sbjct: 241 SHSPLTQKEGEMDSSLSFKSERGEECSDPTTPMSSSSATCDQETKRPHWLFQSLKLK 291

[Close]

BLAST of Sed0009111.1 vs. ExPASy TrEMBL
Match: A0A6J1KW72 (uncharacterized protein LOC111498739 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498739 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 2.2e-76
Identity = 187/298 (62.75%), Postives = 211/298 (70.81%), Query Frame = 0


Query: 1   MGTRF-EVNFNPL-ATSAH--SSNIFTVQKVNEWHHFQDYSTRKPPQKVLTSANVMSTGL 60
           MGTR  +  FNPL  TSAH  SSN FTVQ+VN+W HFQ YST     K  T++  MSTGL
Sbjct: 16  MGTRLNKPTFNPLPTTSAHSSSSNAFTVQRVNDWQHFQGYST-----KFYTTSAAMSTGL 75

Query: 61  EKFQEPMKKVLQKEDMNVIKKTMQIHEHVFKNQVKELHRLYNVQKMLMEEKRKESNQNTL 120
           +KFQE + K+LQK D+  IK TMQ+H++VFKNQVKELHRLY+VQKMLMEE RKE+ QNTL
Sbjct: 76  DKFQEALNKMLQKGDVEAIKNTMQLHDYVFKNQVKELHRLYSVQKMLMEELRKETKQNTL 135

Query: 121 SS---------------------SGGVGLKLNLQ-SMRERSGSCSGDNNMRMSRGFDLER 180
            S                     + G GL  NL  S RERSGSCSGD NMRMSRGFDLER
Sbjct: 136 GSPMASSGFNHLQFNNRETSTTQTAGEGLIFNLDPSSRERSGSCSGD-NMRMSRGFDLER 195

Query: 181 LAAEDMSTGVSTVDEEQAGPSTSIVGK-----------EEGDVELSLSIGGGSTLSKKRS 240
            A EDMSTG+STVDE+QA PST  + +           E+ DVEL+LSIGG  +LSKKRS
Sbjct: 196 PAEEDMSTGISTVDEDQARPSTPTIARKSNKMCIDGCEEDSDVELTLSIGG--SLSKKRS 255

Query: 241 KSF--VIQKKREIDSCLSFKSERGEECSD---PMSSSSASCDQETKRPHWLFQSLKLK 257
           KSF  + QK REIDS LSFKSERGEECSD   PMSSSSA+CDQETK PHWLFQSLKLK
Sbjct: 256 KSFPPITQKDREIDSSLSFKSERGEECSDPTTPMSSSSATCDQETKWPHWLFQSLKLK 305

[Close]

BLAST of Sed0009111.1 vs. ExPASy TrEMBL
Match: A0A6J1KUD3 (uncharacterized protein LOC111498739 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498739 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 2.2e-76
Identity = 187/298 (62.75%), Postives = 211/298 (70.81%), Query Frame = 0


Query: 1   MGTRF-EVNFNPL-ATSAH--SSNIFTVQKVNEWHHFQDYSTRKPPQKVLTSANVMSTGL 60
           MGTR  +  FNPL  TSAH  SSN FTVQ+VN+W HFQ YST     K  T++  MSTGL
Sbjct: 1   MGTRLNKPTFNPLPTTSAHSSSSNAFTVQRVNDWQHFQGYST-----KFYTTSAAMSTGL 60

Query: 61  EKFQEPMKKVLQKEDMNVIKKTMQIHEHVFKNQVKELHRLYNVQKMLMEEKRKESNQNTL 120
           +KFQE + K+LQK D+  IK TMQ+H++VFKNQVKELHRLY+VQKMLMEE RKE+ QNTL
Sbjct: 61  DKFQEALNKMLQKGDVEAIKNTMQLHDYVFKNQVKELHRLYSVQKMLMEELRKETKQNTL 120

Query: 121 SS---------------------SGGVGLKLNLQ-SMRERSGSCSGDNNMRMSRGFDLER 180
            S                     + G GL  NL  S RERSGSCSGD NMRMSRGFDLER
Sbjct: 121 GSPMASSGFNHLQFNNRETSTTQTAGEGLIFNLDPSSRERSGSCSGD-NMRMSRGFDLER 180

Query: 181 LAAEDMSTGVSTVDEEQAGPSTSIVGK-----------EEGDVELSLSIGGGSTLSKKRS 240
            A EDMSTG+STVDE+QA PST  + +           E+ DVEL+LSIGG  +LSKKRS
Sbjct: 181 PAEEDMSTGISTVDEDQARPSTPTIARKSNKMCIDGCEEDSDVELTLSIGG--SLSKKRS 240

Query: 241 KSF--VIQKKREIDSCLSFKSERGEECSD---PMSSSSASCDQETKRPHWLFQSLKLK 257
           KSF  + QK REIDS LSFKSERGEECSD   PMSSSSA+CDQETK PHWLFQSLKLK
Sbjct: 241 KSFPPITQKDREIDSSLSFKSERGEECSDPTTPMSSSSATCDQETKWPHWLFQSLKLK 290

[Close]

BLAST of Sed0009111.1 vs. TAIR 10
Match: AT5G57340.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 81.3 bits (199), Expect = 1.3e-15
Identity = 72/211 (34.12%), Postives = 100/211 (47.39%), Query Frame = 0


Query: 63  MKKVLQKEDMNVIKKTMQIHEHVFKNQVKELHRLYNVQKMLMEEKRKESNQNTLSSSGGV 122
           M + L+K++   I+ TMQ  E +FK QV+ELHR+YN QKM+M + +  S   T+++    
Sbjct: 72  MDRFLEKQNAESIRHTMQAQEDIFKQQVRELHRVYNTQKMMMTQLKHRSQYWTVNNKDQP 131

Query: 123 GLKLNLQSMRERSGSCSGDNNMRMSRGFDLERLAAEDMSTGVSTVDEEQAGPSTSIVGKE 182
           G        RER+GSCS         G DLE +     +T             T  +  E
Sbjct: 132 G-------SRERTGSCS---------GIDLENVVRATQTT-------------TDHI--E 191

Query: 183 EGDVELSLSIGGGS-------TLSKKRSKSFVIQKKREIDSC-------LSFKSERGEEC 242
           E ++EL+LSIG  S       T +K    S     +   D+C       L   S   +E 
Sbjct: 192 ESELELTLSIGLSSSSTTMTTTTNKDMDYSSTTSMRSSSDNCNNQSNNNLYNNSNNNQES 251

Query: 243 SDP----MSSSSASCDQETKRPHWLFQSLKL 256
           S P     SSS+ S D+E KRPHWLFQ L +
Sbjct: 252 SGPNTPMSSSSTTSLDREKKRPHWLFQGLSI 251

[Close]

BLAST of Sed0009111.1 vs. TAIR 10
Match: AT5G57340.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 81.3 bits (199), Expect = 1.3e-15
Identity = 72/211 (34.12%), Postives = 100/211 (47.39%), Query Frame = 0


Query: 63  MKKVLQKEDMNVIKKTMQIHEHVFKNQVKELHRLYNVQKMLMEEKRKESNQNTLSSSGGV 122
           M + L+K++   I+ TMQ  E +FK QV+ELHR+YN QKM+M + +  S   T+++    
Sbjct: 54  MDRFLEKQNAESIRHTMQAQEDIFKQQVRELHRVYNTQKMMMTQLKHRSQYWTVNNKDQP 113

Query: 123 GLKLNLQSMRERSGSCSGDNNMRMSRGFDLERLAAEDMSTGVSTVDEEQAGPSTSIVGKE 182
           G        RER+GSCS         G DLE +     +T             T  +  E
Sbjct: 114 G-------SRERTGSCS---------GIDLENVVRATQTT-------------TDHI--E 173

Query: 183 EGDVELSLSIGGGS-------TLSKKRSKSFVIQKKREIDSC-------LSFKSERGEEC 242
           E ++EL+LSIG  S       T +K    S     +   D+C       L   S   +E 
Sbjct: 174 ESELELTLSIGLSSSSTTMTTTTNKDMDYSSTTSMRSSSDNCNNQSNNNLYNNSNNNQES 233

Query: 243 SDP----MSSSSASCDQETKRPHWLFQSLKL 256
           S P     SSS+ S D+E KRPHWLFQ L +
Sbjct: 234 SGPNTPMSSSSTTSLDREKKRPHWLFQGLSI 233

[Close]

BLAST of Sed0009111.1 vs. TAIR 10
Match: AT5G67390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G69360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 3.9e-04
Identity = 33/83 (39.76%), Postives = 45/83 (54.22%), Query Frame = 0


Query: 63  MKKVLQKEDMNVIKKTMQIHEHVFKNQVKELHRLYNVQKMLME--EKRKESNQNTLSSSG 122
           M+K+L   D   +K  M  HE  FK QV ELHRLY VQK+LM+  E  K + +N   +SG
Sbjct: 1   MEKLLNPYDKQCMKMAMLKHEETFKQQVYELHRLYQVQKILMKNMEINKFTTKNNHVNSG 60

Query: 123 GVGLKLNLQSMRERSGSCSGDNN 144
                  + +  +R  + SG NN
Sbjct: 61  LGTFIRRVDNEIDRPANFSGGNN 83

[Close]

BLAST of Sed0009111.1 vs. TAIR 10
Match: AT5G67390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G69360.1); Has 186 Blast hits to 186 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 3.9e-04
Identity = 33/83 (39.76%), Postives = 45/83 (54.22%), Query Frame = 0


Query: 63  MKKVLQKEDMNVIKKTMQIHEHVFKNQVKELHRLYNVQKMLME--EKRKESNQNTLSSSG 122
           M+K+L   D   +K  M  HE  FK QV ELHRLY VQK+LM+  E  K + +N   +SG
Sbjct: 1   MEKLLNPYDKQCMKMAMLKHEETFKQQVYELHRLYQVQKILMKNMEINKFTTKNNHVNSG 60

Query: 123 GVGLKLNLQSMRERSGSCSGDNN 144
                  + +  +R  + SG NN
Sbjct: 61  LGTFIRRVDNEIDRPANFSGGNN 83

[Close]

BLAST of Sed0009111.1 vs. TAIR 10
Match: AT1G26620.1 (Plant protein of unknown function (DUF863) )

HSP 1 Score: 42.7 bits (99), Expect = 5.0e-04
Identity = 26/44 (59.09%), Postives = 31/44 (70.45%), Query Frame = 0


Query: 71  DMNVIKKTMQIHEHVFKNQVKELHRLYNVQKMLMEE-KRKESNQ 114
           + + +K TM  HE VFKNQV ELHRLY VQK L+EE K K  N+
Sbjct: 14  EKDFMKHTMLEHEAVFKNQVHELHRLYRVQKNLVEEVKGKNLNE 57

The following BLAST results are available for this feature:

BLAST of Sed0009111.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932988.1	4.0e-80	64.43	uncharacterized protein LOC111439615 isoform X1 [Cucurbita moschata]	[more]
XP_022932994.1	4.0e-80	64.43	uncharacterized protein LOC111439615 isoform X2 [Cucurbita moschata]	[more]
KAG6587737.1	4.0e-80	64.43	hypothetical protein SDJN03_16302, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7021705.1	5.3e-80	64.21	hypothetical protein SDJN02_15432, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023531102.1	2.6e-79	64.19	uncharacterized protein LOC111793451 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0009111.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0009111.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F3D4	2.0e-80	64.43	uncharacterized protein LOC111439615 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1EYH8	2.0e-80	64.43	uncharacterized protein LOC111439615 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1BZ33	4.8e-79	64.31	uncharacterized protein LOC111006800 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1KW72	2.2e-76	62.75	uncharacterized protein LOC111498739 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KUD3	2.2e-76	62.75	uncharacterized protein LOC111498739 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Sed0009111.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57340.2	1.3e-15	34.12	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]
AT5G57340.1	1.3e-15	34.12	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT5G67390.1	3.9e-04	39.76	unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of un...	[more]
AT5G67390.2	3.9e-04	39.76	unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of un...	[more]
AT1G26620.1	5.0e-04	59.09	Plant protein of unknown function (DUF863)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..244
None	No IPR available	PANTHER	PTHR33167	FAMILY NOT NAMED	coord: 131..256
None	No IPR available	PANTHER	PTHR33167:SF17	SUBFAMILY NOT NAMED	coord: 131..256
None	No IPR available	PANTHER	PTHR33167:SF17	SUBFAMILY NOT NAMED	coord: 41..116
None	No IPR available	PANTHER	PTHR33167	FAMILY NOT NAMED	coord: 41..116

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0009111	Sed0009111	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009111.1-five_prime_utr	Sed0009111.1-five_prime_utr-LG08:3271445..3271836	five_prime_UTR
Sed0009111.1-five_prime_utr	Sed0009111.1-five_prime_utr-LG08:3273405..3273406	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009111.1-exon	Sed0009111.1-exon-LG08:3271445..3271836	exon
Sed0009111.1-exon	Sed0009111.1-exon-LG08:3273405..3273673	exon
Sed0009111.1-exon	Sed0009111.1-exon-LG08:3274204..3274711	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009111.1-cds	Sed0009111.1-cds-LG08:3273407..3273673	CDS
Sed0009111.1-cds	Sed0009111.1-cds-LG08:3274204..3274707	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009111.1-three_prime_utr	Sed0009111.1-three_prime_utr-LG08:3274708..3274711	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0009111.1	Sed0009111.1-protein	polypeptide