Sed0008802.1 (mRNA) Chayote v1

Overview
NameSed0008802.1
TypemRNA
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG14: 2679330 .. 2679869 (+)
Sequence length540
RNA-Seq ExpressionSed0008802.1
SyntenySed0008802.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCCAAAGCCTTACCATAACAAGTCGACCAAAGCAAACTAGTCAAGCACCAGTTACTAAGCTTTTTTGTTATCAGACTTAAGGATGACTCTTGGAACTGGAATCGGAGGCTTGGTGAGTATCGGGGGTTCGGTTTTTCAACCCGTTACGGATCTTGGCGACGAAGTGGTAGGAAAGTGTGCATGTTTTGCGGTAGAAGAACTAGCAAGGAGGTTGAGCATTGTTATTAAGCTCAGAGCTGTGCTGAGCGCTACCTGTAAGGTCGGGTTGACAGGCACTACCTTTATCCTTAGGCTCGAGGTATCAGTCGAAGTCAATGGCGTTATCGTCATCAAGATCTATCAGGTTGTTGTGTTTTTTCCACTTAATCCCCTGGCTGGTTCATTGTCCCTCGAAGGTTTTGAATGCATCGAAGCCTAATAGATCTACTTCCCTTGCCTACTTTATTATAGATGATGCATTCTAAAGCATTGTCTTTTAACCTATCAATGAAATAAAGTTTTAGCTATATGTATTTAACGTCTTGATCTTTTAGATTTCA

mRNA sequence

TGCCAAAGCCTTACCATAACAAGTCGACCAAAGCAAACTAGTCAAGCACCAGTTACTAAGCTTTTTTGTTATCAGACTTAAGGATGACTCTTGGAACTGGAATCGGAGGCTTGGTGAGTATCGGGGGTTCGGTTTTTCAACCCGTTACGGATCTTGGCGACGAAGTGGTAGGAAAGTGTGCATGTTTTGCGGTAGAAGAACTAGCAAGGAGGTTGAGCATTGTTATTAAGCTCAGAGCTGTGCTGAGCGCTACCTGTAAGGTCGGGTTGACAGGCACTACCTTTATCCTTAGGCTCGAGGTATCAGTCGAAGTCAATGGCGTTATCGTCATCAAGATCTATCAGGTTGTTGTGTTTTTTCCACTTAATCCCCTGGCTGGTTCATTGTCCCTCGAAGGTTTTGAATGCATCGAAGCCTAATAGATCTACTTCCCTTGCCTACTTTATTATAGATGATGCATTCTAAAGCATTGTCTTTTAACCTATCAATGAAATAAAGTTTTAGCTATATGTATTTAACGTCTTGATCTTTTAGATTTCA

Coding sequence (CDS)

ATGACTCTTGGAACTGGAATCGGAGGCTTGGTGAGTATCGGGGGTTCGGTTTTTCAACCCGTTACGGATCTTGGCGACGAAGTGGTAGGAAAGTGTGCATGTTTTGCGGTAGAAGAACTAGCAAGGAGGTTGAGCATTGTTATTAAGCTCAGAGCTGTGCTGAGCGCTACCTGTAAGGTCGGGTTGACAGGCACTACCTTTATCCTTAGGCTCGAGGTATCAGTCGAAGTCAATGGCGTTATCGTCATCAAGATCTATCAGGTTGTTGTGTTTTTTCCACTTAATCCCCTGGCTGGTTCATTGTCCCTCGAAGGTTTTGAATGCATCGAAGCCTAA

Protein sequence

MTLGTGIGGLVSIGGSVFQPVTDLGDEVVGKCACFAVEELARRLSIVIKLRAVLSATCKVGLTGTTFILRLEVSVEVNGVIVIKIYQVVVFFPLNPLAGSLSLEGFECIEA
Homology
The following BLAST results are available for this feature:
BLAST of Sed0008802.1 vs.
Match NameE-valueIdentityDescription
BLAST of Sed0008802.1 vs.
Match NameE-valueIdentityDescription
BLAST of Sed0008802.1 vs.
Match NameE-valueIdentityDescription
BLAST of Sed0008802.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Sed0008802Sed0008802gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0008802.1-five_prime_utrSed0008802.1-five_prime_utr-LG14:2679330..2679412five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0008802.1-exonSed0008802.1-exon-LG14:2679330..2679869exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0008802.1-cdsSed0008802.1-cds-LG14:2679413..2679748CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0008802.1-three_prime_utrSed0008802.1-three_prime_utr-LG14:2679749..2679869three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Sed0008802.1Sed0008802.1-proteinpolypeptide