Sed0007490.1 (mRNA) Chayote v1

Overview


Name	Sed0007490.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Zinc finger protein
Location	LG12: 7764525 .. 7765103 (-)
Sequence length	579
RNA-Seq Expression	Sed0007490.1
Synteny	Sed0007490.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTTCAGACAAGTCCAATGCTTCTGATTCTTATAAGGTTACGAATTCGAAACCAGAATTAAAAGCTCTAACGAGAACGGAGATAAGGACAGGGAATGAAAGTGAAACTCGAGTTTTTCATTGCAAATTTTGCAGTAGAAAGTTCTCGAATCTACAGGCATTGGGGGGCCACCAAAACGCTCACAAACGAGAAAGAGCCATTGCTAAAGGAGAGAAGGCCGCCATGGGCGCAGCCGCAATGAGCTTCCCAACCGCAGCGAGTTCTTTTTACCATCCGTATTATTCGGCAATGGTGATTCATCAATCTCTACGAAACAAAGCCGTAAGGTTTCGGTTTCAGCCGATTAGTCGTCCTCGAGTCGAACTCGGTGGCACGTCTCGATCCCATGGCTTCCGATGGTGGTCGAGAGAACAACACATGGAGGCGGCCGCGGTGGCGCAGCAGCAGTTGCAGTTGGGAAGTGGATTGGAATATTATTCCATAGCAAGAAACGGTTCTTCTTCTACTTCTTCACAGAATTTTGATGTCGATCAGTACAATATTCATGGCCTTGATTTAACTCTCAAACTTTGA

mRNA sequence

ATGTCTTCTTCAGACAAGTCCAATGCTTCTGATTCTTATAAGGTTACGAATTCGAAACCAGAATTAAAAGCTCTAACGAGAACGGAGATAAGGACAGGGAATGAAAGTGAAACTCGAGTTTTTCATTGCAAATTTTGCAGTAGAAAGTTCTCGAATCTACAGGCATTGGGGGGCCACCAAAACGCTCACAAACGAGAAAGAGCCATTGCTAAAGGAGAGAAGGCCGCCATGGGCGCAGCCGCAATGAGCTTCCCAACCGCAGCGAGTTCTTTTTACCATCCGTATTATTCGGCAATGGTGATTCATCAATCTCTACGAAACAAAGCCGTAAGGTTTCGGTTTCAGCCGATTAGTCGTCCTCGAGTCGAACTCGGTGGCACGTCTCGATCCCATGGCTTCCGATGGTGGTCGAGAGAACAACACATGGAGGCGGCCGCGGTGGCGCAGCAGCAGTTGCAGTTGGGAAGTGGATTGGAATATTATTCCATAGCAAGAAACGGTTCTTCTTCTACTTCTTCACAGAATTTTGATGTCGATCAGTACAATATTCATGGCCTTGATTTAACTCTCAAACTTTGA

Coding sequence (CDS)

ATGTCTTCTTCAGACAAGTCCAATGCTTCTGATTCTTATAAGGTTACGAATTCGAAACCAGAATTAAAAGCTCTAACGAGAACGGAGATAAGGACAGGGAATGAAAGTGAAACTCGAGTTTTTCATTGCAAATTTTGCAGTAGAAAGTTCTCGAATCTACAGGCATTGGGGGGCCACCAAAACGCTCACAAACGAGAAAGAGCCATTGCTAAAGGAGAGAAGGCCGCCATGGGCGCAGCCGCAATGAGCTTCCCAACCGCAGCGAGTTCTTTTTACCATCCGTATTATTCGGCAATGGTGATTCATCAATCTCTACGAAACAAAGCCGTAAGGTTTCGGTTTCAGCCGATTAGTCGTCCTCGAGTCGAACTCGGTGGCACGTCTCGATCCCATGGCTTCCGATGGTGGTCGAGAGAACAACACATGGAGGCGGCCGCGGTGGCGCAGCAGCAGTTGCAGTTGGGAAGTGGATTGGAATATTATTCCATAGCAAGAAACGGTTCTTCTTCTACTTCTTCACAGAATTTTGATGTCGATCAGTACAATATTCATGGCCTTGATTTAACTCTCAAACTTTGA

Protein sequence

MSSSDKSNASDSYKVTNSKPELKALTRTEIRTGNESETRVFHCKFCSRKFSNLQALGGHQNAHKRERAIAKGEKAAMGAAAMSFPTAASSFYHPYYSAMVIHQSLRNKAVRFRFQPISRPRVELGGTSRSHGFRWWSREQHMEAAAVAQQQLQLGSGLEYYSIARNGSSSTSSQNFDVDQYNIHGLDLTLKL

Homology

[Close]

BLAST of Sed0007490.1 vs. NCBI nr
Match: XP_023528967.1 (zinc finger protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 171.0 bits (432), Expect = 9.9e-39
Identity = 124/234 (52.99%), Postives = 139/234 (59.40%), Query Frame = 0


Query: 1   MSSSDKSNASD-------SYKVTNSKP---ELKALTRTEIRTGNESETRVFHCKFCSRKF 60
           M+SS KS  S+       S+KV  ++P   E+     TE RT  + ETRVF+CKFCSRKF
Sbjct: 1   MASSGKSEGSEVELNLQHSFKVLKAEPGFEEVGTAMGTETRT--KRETRVFYCKFCSRKF 60

Query: 61  SNLQALGGHQNAHKRERAIAKGEKA-AMGAAAMSFPTAAS--------------SFYHPY 120
           SNLQALGGHQNAHKRER IAK EKA A  AAAMSF T  +              SFYHPY
Sbjct: 61  SNLQALGGHQNAHKRERDIAKREKAVAAAAAAMSFRTTTTAAAATSTDAFDSIGSFYHPY 120

Query: 121 YSAMVIHQSLRNKAVRFRFQPISRPRVELGGTSRSHGFRWWSREQHMEAAAVAQQQLQLG 180
           YSAM I QSLRNKA+ F  +P  R    L     +HG RWW REQ+M  AA A QQL  G
Sbjct: 121 YSAMAI-QSLRNKALGFPIRPPIRKPTRLQAV--AHGCRWWPREQYM--AAAAAQQLHFG 180

Query: 181 --------------SGLEYYSIA---RNGSSSTSSQNFDVDQYNIHGLDLTLKL 193
                         +  E  SIA   RN SSS+SSQ F  DQYNIHGLDLTLKL
Sbjct: 181 GLWQAANNGGRENLAATELESIAMASRNASSSSSSQIFGADQYNIHGLDLTLKL 227

[Close]

BLAST of Sed0007490.1 vs. NCBI nr
Match: XP_022983384.1 (zinc finger protein 1-like [Cucurbita maxima])

HSP 1 Score: 168.3 bits (425), Expect = 6.4e-38
Identity = 113/205 (55.12%), Postives = 131/205 (63.90%), Query Frame = 0


Query: 8   NASDSYKVTNSKPELKALTRTEIRTGNESETRVFHCKFCSRKFSNLQALGGHQNAHKRER 67
           N   S+K      + + +   E+RT  + ETRVF+CKFCSRKFSNLQALGGHQNAHKRER
Sbjct: 15  NLQHSFKAEPGFFKARTVMGMEMRT--KKETRVFYCKFCSRKFSNLQALGGHQNAHKRER 74

Query: 68  AIAKGEKAAMGAAAMSF---PTAAS------------SFYHPYYSAMVIHQSLRNKAVRF 127
            IAK EKAA  AAAMSF    TAAS            SFY+PYYSAM IH SLRNKA+ F
Sbjct: 75  DIAKREKAAAAAAAMSFRTTTTAASAATSTDAFDSIGSFYYPYYSAMAIH-SLRNKALGF 134

Query: 128 RFQPISRPRVELGGTSRSHGFRWWSREQHMEAAAVAQQQLQLG----SGLEYYSIA-RNG 187
             +P S  R      + +HG RWW REQ+M AAA   QQL  G    +  E  SIA  + 
Sbjct: 135 PIRPQSTIRKPTRPQAVAHGCRWWPREQYMAAAA---QQLHFGRENLAATELESIAMASR 194

Query: 188 SSSTSSQNFDVDQYNIHGLDLTLKL 193
           ++S+SSQ F  DQYNIHGLDLTLKL
Sbjct: 195 NASSSSQIFGADQYNIHGLDLTLKL 213

[Close]

BLAST of Sed0007490.1 vs. NCBI nr
Match: XP_004136633.1 (zinc finger protein 1 [Cucumis sativus] >KGN59425.1 hypothetical protein Csa_001317 [Cucumis sativus])

HSP 1 Score: 168.3 bits (425), Expect = 6.4e-38
Identity = 117/220 (53.18%), Postives = 143/220 (65.00%), Query Frame = 0


Query: 1   MSSSDKS-NASDSY----KVTNSKPELKALTRTEIRTGNESETRVFHCKFCSRKFSNLQA 60
           MSSSDK  N+ D +    + ++  PE +   + E  T  + ETRVF+CKFCSRKFSNLQA
Sbjct: 1   MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA 60

Query: 61  LGGHQNAHKRERAIAKGEKAAMGAAAMSFPT-----AASSFYHPYYSAMVIHQSLRNKAV 120
           LGGHQNAHKRER IAK EKAA  AAA    T     +  SFYHPYYSAM IH  LRNK+ 
Sbjct: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIH-CLRNKSP 120

Query: 121 RFRFQP------ISRPRVELGG--TSRSHGFRWWSREQHMEAAAVA-QQQLQLGSGLE-- 180
               +P       SR RVELGG  T+ ++G+RWW REQ++ AA VA QQQ+Q G  L+  
Sbjct: 121 GIPIRPQSVIRKPSRSRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGV 180

Query: 181 ---YYSIA---RN-GSSSTSSQNFDVDQYNIHGLDLTLKL 193
              + S+A   RN  SSS+SSQ F  DQY ++GLDL+LKL
Sbjct: 181 NNGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL 219

[Close]

BLAST of Sed0007490.1 vs. NCBI nr
Match: XP_008443609.1 (PREDICTED: uncharacterized protein LOC103487164 [Cucumis melo] >ADN33884.1 zinc finger protein [Cucumis melo subsp. melo] >KAA0053898.1 zinc finger protein GIS-like [Cucumis melo var. makuwa] >TYK25508.1 zinc finger protein GIS-like [Cucumis melo var. makuwa])

HSP 1 Score: 165.2 bits (417), Expect = 5.4e-37
Identity = 115/221 (52.04%), Postives = 135/221 (61.09%), Query Frame = 0


Query: 1   MSSSDKSNASDSYKVTNSKPELKALTRTEIRTGNESETRVFHCKFCSRKFSNLQALGGHQ 60
           MSSSDKSNASD  +  N +   K   + E     + ETRVF+CKFCSR FSNLQALGGHQ
Sbjct: 1   MSSSDKSNASDHERNYN-QDSFKESEQPETEAKAKEETRVFYCKFCSRNFSNLQALGGHQ 60

Query: 61  NAHKRERAIAKGEKAAMGAAAMSFPT-----AASSFYHPYYSAMVIHQSLRNKAVRFRFQ 120
           NAHKRER IAK EKAA  AAA    T     +  SFYHPYYS M IH SLRNK+  F  +
Sbjct: 61  NAHKRERDIAKREKAAAAAAAAGGRTTDVFDSIGSFYHPYYSVMAIH-SLRNKSPGFPIR 120

Query: 121 P------ISRPRVELGG---------TSRSHGFRWWSREQHMEA-AAVAQQQLQLGSGLE 180
           P       SR RVEL G          + ++G+RWW REQ+M A AA  QQQ+Q G  L+
Sbjct: 121 PQSVIRKPSRSRVELSGGGATAAAAAAAAAYGYRWWPREQYMAALAAAQQQQIQSGGLLQ 180

Query: 181 -----YYSIAR---NGSSSTSSQNFDVDQYNIHGLDLTLKL 193
                + SIA    N SSS+S Q F  DQ  ++GLDL+LKL
Sbjct: 181 GFNNGFESIAMENINASSSSSPQIFGADQCIVNGLDLSLKL 219

[Close]

BLAST of Sed0007490.1 vs. NCBI nr
Match: XP_038903464.1 (zinc finger protein 3-like [Benincasa hispida])

HSP 1 Score: 164.9 bits (416), Expect = 7.1e-37
Identity = 114/210 (54.29%), Postives = 141/210 (67.14%), Query Frame = 0


Query: 1   MSSSDKSNA---SDSYKVTNSKPELKALTRTEIRTGNESETRVFHCKFCSRKFSNLQALG 60
           MSSSD+S+     DS K+     E + +T TE++   + ETRVF+CKFCSRKFSNLQALG
Sbjct: 1   MSSSDRSDEHHNQDSSKLI----EPETVTVTEMKP--KDETRVFYCKFCSRKFSNLQALG 60

Query: 61  GHQNAHKRERAIAKGEKAAMGAAAMSFPTAASSFYHPYYSAMVIHQSLRNKAVRFRFQP- 120
           GHQNAHKRER IAK EKAA  AAA     A  SFYHPYYSAM IH SLRNK + F  +P 
Sbjct: 61  GHQNAHKRERDIAKREKAAATAAAARSTDALLSFYHPYYSAMAIH-SLRNKDLGFPIRPH 120

Query: 121 -----ISRPRVELGGTSRSHGFRWWSREQHMEAAAVAQQQLQLGSGLEYYSIAR------ 180
                 SR RVELGG + ++ +R WSREQ+M  AA  QQQLQ  + L+  ++A       
Sbjct: 121 SAIRKPSRSRVELGGAA-AYAYRLWSREQYM--AAAQQQQLQTVALLQGENLAATRLESI 180

Query: 181 ---NGSSSTSSQNFDVDQYNIHGLDLTLKL 193
              + ++S+SSQ F VDQY+I+GLDL+LKL
Sbjct: 181 ALGSTNASSSSQIFGVDQYSINGLDLSLKL 200

[Close]

BLAST of Sed0007490.1 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.5e-08
Identity = 51/145 (35.17%), Postives = 72/145 (49.66%), Query Frame = 0


Query: 3   SSDKSNASDSYKVTNSKPELKALTRTEIRTG--NES----ETRVFHCKFCSRKFSNLQAL 62
           S ++S   +   V NS  EL  +   +  T   NES    E ++F C +C R F + QAL
Sbjct: 17  SLNQSIEDEERDVHNSSHELNLIDCIDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQAL 76

Query: 63  GGHQNAHKRERAIAK-GEKAAMGAAAMSFPTAASSFYHPY-YSAMVIHQSLRN-KAVRFR 122
           GGHQNAHKRER +AK G++ A          +AS+F HPY +S +  H    N +++  +
Sbjct: 77  GGHQNAHKRERTLAKRGQRMA---------ASASAFGHPYGFSPLPFHGQYNNHRSLGIQ 136

Query: 123 FQPISRPRVELGGTSRSHGFRWWSR 139
              IS       G    +G   WSR
Sbjct: 137 AHSISHKLSSYNGFGGHYGQINWSR 152

[Close]

BLAST of Sed0007490.1 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-07
Identity = 41/115 (35.65%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 2   SSSDKSNASDSYKVTNSKPELKALTRTEIRTGNESETRVFHCKFCSRKFSNLQALGGHQN 61
           ++S + N  DS+K ++S        + ++     ++ RVF C +C RKF + QALGGHQN
Sbjct: 34  ATSSELNLIDSFKTSSSSTSHHQHQQEQL-----ADPRVFSCNYCQRKFYSSQALGGHQN 93

Query: 62  AHKRERAIAK-GEKAAMGAAAMSFPTAASSFYHPYYS------AMVIHQSLRNKA 110
           AHKRER +AK G+   M     S P++A +F H   S      ++ +H S+ N++
Sbjct: 94  AHKRERTLAKRGQYYKM--TLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRS 141

[Close]

BLAST of Sed0007490.1 vs. ExPASy Swiss-Prot
Match: Q9FKA9 (Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.1e-07
Identity = 29/56 (51.79%), Postives = 34/56 (60.71%), Query Frame = 0


Query: 21 ELKALTRTEIRTGNESETRVFHCKFCSRKFSNLQALGGHQNAHKRERAIAKGEKAA 77
          E+K          N S  R+F C FCSRKF + QALGGHQNAHK+ER  A+  K A
Sbjct: 15 EIKPSKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRA 70

[Close]

BLAST of Sed0007490.1 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 7.9e-07
Identity = 31/52 (59.62%), Postives = 35/52 (67.31%), Query Frame = 0


Query: 39  RVFHCKFCSRKFSNLQALGGHQNAHKRERAIAKGEKAAMGAAAMSFPTAASS 91
           RVF C +C RKF + QALGGHQNAHKRER +AK     MG A + FP   SS
Sbjct: 83  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK-RAMRMGLAGV-FPGRGSS 132

[Close]

BLAST of Sed0007490.1 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.3e-06
Identity = 38/113 (33.63%), Postives = 58/113 (51.33%), Query Frame = 0


Query: 32  TGNESETRVFHCKFCSRKFSNLQALGGHQNAHKRERAIAKGEKAAMGAAAMSFPTAASSF 91
           +G+ SE+R + C++C R+F+N QALGGHQNAHK+ER +    K A   A    P   +  
Sbjct: 32  SGSGSESRKYECQYCCREFANSQALGGHQNAHKKERQLL---KRAQMLATRGLPRHHN-- 91

Query: 92  YHPYYSAMVIHQSLRNKAVRFRFQPISRPRVELGGTSRSHGFRWWSREQHMEA 145
           +HP+ + ++   S          QP   P + L  +S S     W   +HM +
Sbjct: 92  FHPHTNPLL---SAFAPLPHLLSQPHPPPHMMLSPSSSSSK---WLYGEHMSS 133

[Close]

BLAST of Sed0007490.1 vs. ExPASy TrEMBL
Match: A0A6J1J773 (zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481989 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 3.1e-38
Identity = 113/205 (55.12%), Postives = 131/205 (63.90%), Query Frame = 0


Query: 8   NASDSYKVTNSKPELKALTRTEIRTGNESETRVFHCKFCSRKFSNLQALGGHQNAHKRER 67
           N   S+K      + + +   E+RT  + ETRVF+CKFCSRKFSNLQALGGHQNAHKRER
Sbjct: 15  NLQHSFKAEPGFFKARTVMGMEMRT--KKETRVFYCKFCSRKFSNLQALGGHQNAHKRER 74

Query: 68  AIAKGEKAAMGAAAMSF---PTAAS------------SFYHPYYSAMVIHQSLRNKAVRF 127
            IAK EKAA  AAAMSF    TAAS            SFY+PYYSAM IH SLRNKA+ F
Sbjct: 75  DIAKREKAAAAAAAMSFRTTTTAASAATSTDAFDSIGSFYYPYYSAMAIH-SLRNKALGF 134

Query: 128 RFQPISRPRVELGGTSRSHGFRWWSREQHMEAAAVAQQQLQLG----SGLEYYSIA-RNG 187
             +P S  R      + +HG RWW REQ+M AAA   QQL  G    +  E  SIA  + 
Sbjct: 135 PIRPQSTIRKPTRPQAVAHGCRWWPREQYMAAAA---QQLHFGRENLAATELESIAMASR 194

Query: 188 SSSTSSQNFDVDQYNIHGLDLTLKL 193
           ++S+SSQ F  DQYNIHGLDLTLKL
Sbjct: 195 NASSSSQIFGADQYNIHGLDLTLKL 213

[Close]

BLAST of Sed0007490.1 vs. ExPASy TrEMBL
Match: A0A0A0LBM7 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G819820 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 3.1e-38
Identity = 117/220 (53.18%), Postives = 143/220 (65.00%), Query Frame = 0


Query: 1   MSSSDKS-NASDSY----KVTNSKPELKALTRTEIRTGNESETRVFHCKFCSRKFSNLQA 60
           MSSSDK  N+ D +    + ++  PE +   + E  T  + ETRVF+CKFCSRKFSNLQA
Sbjct: 1   MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA 60

Query: 61  LGGHQNAHKRERAIAKGEKAAMGAAAMSFPT-----AASSFYHPYYSAMVIHQSLRNKAV 120
           LGGHQNAHKRER IAK EKAA  AAA    T     +  SFYHPYYSAM IH  LRNK+ 
Sbjct: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIH-CLRNKSP 120

Query: 121 RFRFQP------ISRPRVELGG--TSRSHGFRWWSREQHMEAAAVA-QQQLQLGSGLE-- 180
               +P       SR RVELGG  T+ ++G+RWW REQ++ AA VA QQQ+Q G  L+  
Sbjct: 121 GIPIRPQSVIRKPSRSRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGV 180

Query: 181 ---YYSIA---RN-GSSSTSSQNFDVDQYNIHGLDLTLKL 193
              + S+A   RN  SSS+SSQ F  DQY ++GLDL+LKL
Sbjct: 181 NNGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL 219

[Close]

BLAST of Sed0007490.1 vs. ExPASy TrEMBL
Match: A0A5D3DPN0 (Zinc finger protein GIS-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006570 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 2.6e-37
Identity = 115/221 (52.04%), Postives = 135/221 (61.09%), Query Frame = 0


Query: 1   MSSSDKSNASDSYKVTNSKPELKALTRTEIRTGNESETRVFHCKFCSRKFSNLQALGGHQ 60
           MSSSDKSNASD  +  N +   K   + E     + ETRVF+CKFCSR FSNLQALGGHQ
Sbjct: 1   MSSSDKSNASDHERNYN-QDSFKESEQPETEAKAKEETRVFYCKFCSRNFSNLQALGGHQ 60

Query: 61  NAHKRERAIAKGEKAAMGAAAMSFPT-----AASSFYHPYYSAMVIHQSLRNKAVRFRFQ 120
           NAHKRER IAK EKAA  AAA    T     +  SFYHPYYS M IH SLRNK+  F  +
Sbjct: 61  NAHKRERDIAKREKAAAAAAAAGGRTTDVFDSIGSFYHPYYSVMAIH-SLRNKSPGFPIR 120

Query: 121 P------ISRPRVELGG---------TSRSHGFRWWSREQHMEA-AAVAQQQLQLGSGLE 180
           P       SR RVEL G          + ++G+RWW REQ+M A AA  QQQ+Q G  L+
Sbjct: 121 PQSVIRKPSRSRVELSGGGATAAAAAAAAAYGYRWWPREQYMAALAAAQQQQIQSGGLLQ 180

Query: 181 -----YYSIAR---NGSSSTSSQNFDVDQYNIHGLDLTLKL 193
                + SIA    N SSS+S Q F  DQ  ++GLDL+LKL
Sbjct: 181 GFNNGFESIAMENINASSSSSPQIFGADQCIVNGLDLSLKL 219

[Close]

BLAST of Sed0007490.1 vs. ExPASy TrEMBL
Match: E5GBP2 (Zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 2.6e-37
Identity = 115/221 (52.04%), Postives = 135/221 (61.09%), Query Frame = 0


Query: 1   MSSSDKSNASDSYKVTNSKPELKALTRTEIRTGNESETRVFHCKFCSRKFSNLQALGGHQ 60
           MSSSDKSNASD  +  N +   K   + E     + ETRVF+CKFCSR FSNLQALGGHQ
Sbjct: 1   MSSSDKSNASDHERNYN-QDSFKESEQPETEAKAKEETRVFYCKFCSRNFSNLQALGGHQ 60

Query: 61  NAHKRERAIAKGEKAAMGAAAMSFPT-----AASSFYHPYYSAMVIHQSLRNKAVRFRFQ 120
           NAHKRER IAK EKAA  AAA    T     +  SFYHPYYS M IH SLRNK+  F  +
Sbjct: 61  NAHKRERDIAKREKAAAAAAAAGGRTTDVFDSIGSFYHPYYSVMAIH-SLRNKSPGFPIR 120

Query: 121 P------ISRPRVELGG---------TSRSHGFRWWSREQHMEA-AAVAQQQLQLGSGLE 180
           P       SR RVEL G          + ++G+RWW REQ+M A AA  QQQ+Q G  L+
Sbjct: 121 PQSVIRKPSRSRVELSGGGATAAAAAAAAAYGYRWWPREQYMAALAAAQQQQIQSGGLLQ 180

Query: 181 -----YYSIAR---NGSSSTSSQNFDVDQYNIHGLDLTLKL 193
                + SIA    N SSS+S Q F  DQ  ++GLDL+LKL
Sbjct: 181 GFNNGFESIAMENINASSSSSPQIFGADQCIVNGLDLSLKL 219

[Close]

BLAST of Sed0007490.1 vs. ExPASy TrEMBL
Match: A0A1S3B7Y9 (uncharacterized protein LOC103487164 OS=Cucumis melo OX=3656 GN=LOC103487164 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 2.6e-37
Identity = 115/221 (52.04%), Postives = 135/221 (61.09%), Query Frame = 0


Query: 1   MSSSDKSNASDSYKVTNSKPELKALTRTEIRTGNESETRVFHCKFCSRKFSNLQALGGHQ 60
           MSSSDKSNASD  +  N +   K   + E     + ETRVF+CKFCSR FSNLQALGGHQ
Sbjct: 1   MSSSDKSNASDHERNYN-QDSFKESEQPETEAKAKEETRVFYCKFCSRNFSNLQALGGHQ 60

Query: 61  NAHKRERAIAKGEKAAMGAAAMSFPT-----AASSFYHPYYSAMVIHQSLRNKAVRFRFQ 120
           NAHKRER IAK EKAA  AAA    T     +  SFYHPYYS M IH SLRNK+  F  +
Sbjct: 61  NAHKRERDIAKREKAAAAAAAAGGRTTDVFDSIGSFYHPYYSVMAIH-SLRNKSPGFPIR 120

Query: 121 P------ISRPRVELGG---------TSRSHGFRWWSREQHMEA-AAVAQQQLQLGSGLE 180
           P       SR RVEL G          + ++G+RWW REQ+M A AA  QQQ+Q G  L+
Sbjct: 121 PQSVIRKPSRSRVELSGGGATAAAAAAAAAYGYRWWPREQYMAALAAAQQQQIQSGGLLQ 180

Query: 181 -----YYSIAR---NGSSSTSSQNFDVDQYNIHGLDLTLKL 193
                + SIA    N SSS+S Q F  DQ  ++GLDL+LKL
Sbjct: 181 GFNNGFESIAMENINASSSSSPQIFGADQCIVNGLDLSLKL 219

[Close]

BLAST of Sed0007490.1 vs. TAIR 10
Match: AT5G01860.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 61.6 bits (148), Expect = 7.9e-10
Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 0


Query: 29  EIRTGNESETRVFHCKFCSRKFSNLQALGGHQNAHKRERAIAKGEK 75
           E  T NE++ RVF C FC ++FS  QALGGHQNAHK+ER++AK  K
Sbjct: 55  ESSTRNEAKARVFACTFCKKEFSTSQALGGHQNAHKQERSLAKRRK 100

[Close]

BLAST of Sed0007490.1 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 60.5 bits (145), Expect = 1.8e-09
Identity = 51/145 (35.17%), Postives = 72/145 (49.66%), Query Frame = 0


Query: 3   SSDKSNASDSYKVTNSKPELKALTRTEIRTG--NES----ETRVFHCKFCSRKFSNLQAL 62
           S ++S   +   V NS  EL  +   +  T   NES    E ++F C +C R F + QAL
Sbjct: 17  SLNQSIEDEERDVHNSSHELNLIDCIDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQAL 76

Query: 63  GGHQNAHKRERAIAK-GEKAAMGAAAMSFPTAASSFYHPY-YSAMVIHQSLRN-KAVRFR 122
           GGHQNAHKRER +AK G++ A          +AS+F HPY +S +  H    N +++  +
Sbjct: 77  GGHQNAHKRERTLAKRGQRMA---------ASASAFGHPYGFSPLPFHGQYNNHRSLGIQ 136

Query: 123 FQPISRPRVELGGTSRSHGFRWWSR 139
              IS       G    +G   WSR
Sbjct: 137 AHSISHKLSSYNGFGGHYGQINWSR 152

[Close]

BLAST of Sed0007490.1 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.8e-09
Identity = 38/116 (32.76%), Postives = 61/116 (52.59%), Query Frame = 0


Query: 36  SETRVFHCKFCSRKFSNLQALGGHQNAHKRERAIAK-GEKAAMGAAAMSFPTAASSFYHP 95
           +E ++F C +C R F + QALGGHQNAHKRER +AK G++ A          +A++F HP
Sbjct: 99  TEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMA----------SAAAFGHP 158

Query: 96  Y-YSAMVIHQSLRNKAVRFRFQPISRPRVELGGTSRSHGFRWWSREQHMEAAAVAQ 150
           Y ++ +  H    N+ +  +   +S            +G   WSR   ++  A+A+
Sbjct: 159 YGFAPVPFHGQYSNRTLGIQAHSMSHKPSSYNVYGGEYGQINWSRIPLVQQPAIAK 204

[Close]

BLAST of Sed0007490.1 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 58.2 bits (139), Expect = 8.7e-09
Identity = 41/115 (35.65%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 2   SSSDKSNASDSYKVTNSKPELKALTRTEIRTGNESETRVFHCKFCSRKFSNLQALGGHQN 61
           ++S + N  DS+K ++S        + ++     ++ RVF C +C RKF + QALGGHQN
Sbjct: 34  ATSSELNLIDSFKTSSSSTSHHQHQQEQL-----ADPRVFSCNYCQRKFYSSQALGGHQN 93

Query: 62  AHKRERAIAK-GEKAAMGAAAMSFPTAASSFYHPYYS------AMVIHQSLRNKA 110
           AHKRER +AK G+   M     S P++A +F H   S      ++ +H S+ N++
Sbjct: 94  AHKRERTLAKRGQYYKM--TLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRS 141

[Close]

BLAST of Sed0007490.1 vs. TAIR 10
Match: AT5G48890.1 (C2H2-like zinc finger protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.5e-08
Identity = 29/56 (51.79%), Postives = 34/56 (60.71%), Query Frame = 0


Query: 21 ELKALTRTEIRTGNESETRVFHCKFCSRKFSNLQALGGHQNAHKRERAIAKGEKAA 77
          E+K          N S  R+F C FCSRKF + QALGGHQNAHK+ER  A+  K A
Sbjct: 15 EIKPSKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRA 70

The following BLAST results are available for this feature:

BLAST of Sed0007490.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528967.1	9.9e-39	52.99	zinc finger protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022983384.1	6.4e-38	55.12	zinc finger protein 1-like [Cucurbita maxima]	[more]
XP_004136633.1	6.4e-38	53.18	zinc finger protein 1 [Cucumis sativus] >KGN59425.1 hypothetical protein Csa_001...	[more]
XP_008443609.1	5.4e-37	52.04	PREDICTED: uncharacterized protein LOC103487164 [Cucumis melo] >ADN33884.1 zinc ...	[more]
XP_038903464.1	7.1e-37	54.29	zinc finger protein 3-like [Benincasa hispida]	[more]

BLAST of Sed0007490.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39262	2.5e-08	35.17	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
Q42485	1.2e-07	35.65	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q9FKA9	2.1e-07	51.79	Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1	[more]
Q39263	7.9e-07	59.62	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q39265	2.3e-06	33.63	Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1	[more]

BLAST of Sed0007490.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J773	3.1e-38	55.12	zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481989 PE=4 SV=1	[more]
A0A0A0LBM7	3.1e-38	53.18	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G819820 P...	[more]
A0A5D3DPN0	2.6e-37	52.04	Zinc finger protein GIS-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
E5GBP2	2.6e-37	52.04	Zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3B7Y9	2.6e-37	52.04	uncharacterized protein LOC103487164 OS=Cucumis melo OX=3656 GN=LOC103487164 PE=...	[more]

BLAST of Sed0007490.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01860.1	7.9e-10	60.87	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G25160.1	1.8e-09	35.17	zinc finger protein 3	[more]
AT5G10970.1	1.8e-09	32.76	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G80730.1	8.7e-09	35.65	zinc-finger protein 1	[more]
AT5G48890.1	1.5e-08	51.79	C2H2-like zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 15..86 e-value: 1.9E-7 score: 32.8
None	No IPR available	PANTHER	PTHR45730	ZINC FINGER PROTEIN JAGGED	coord: 17..192
None	No IPR available	PANTHER	PTHR45730:SF28	OS02G0182300 PROTEIN	coord: 17..192
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 43..63
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 41..68 score: 11.260599
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 38..68

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0007490	Sed0007490	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0007490.1-cds	Sed0007490.1-cds-LG12:7764525..7765103	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0007490.1-exon	Sed0007490.1-exon-LG12:7764525..7765103	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0007490.1	Sed0007490.1-protein	polypeptide