Sed0007458.1 (mRNA) Chayote v1

Overview


Name	Sed0007458.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	ethylene-responsive transcription factor ERF037-like
Location	LG11: 512499 .. 513559 (+)
Sequence length	1061
RNA-Seq Expression	Sed0007458.1
Synteny	Sed0007458.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGTACCCCCTCAACATTTTAGCCTCTCTCTCTCTCTCGTAAATGTGTGTTGATTACGTGTCAGATTTATATTGACGCCATGCAATTTGATTTGGCCAATGGTGCTTGTTTAAAATCCCCCCAATCTTTTACTCAAACTTCAATTACTCTTCACTCTCATACACGTTTCCATTCACTCTCTCCCTAAATTTCTAACCAATAATAACTCCGATCGGTCCCGAATGGTGGACGCCACCGTGCCAGAGACCGACTCGGGTGGCGCCAATTCCTCGTCCTCATCCTCCTCCTATCTCTCGCCTTCATGTTCCATCTCGTCTCCCCCAAAACAAGGCAATACCATGCACAAGGGAAGGCGTGAAGAAATCAGCAGCAACAACAATCCACACCCAATTTACCGCGGTGTTCGAAAGAGGGCGTGGGGCAAATGGGTGTCGGAAATTCGAGAACCCAAGAAGAAGAGTCGGATTTGGTTGGGTACCTTCGCAACGCCTGAAATGGCGGCGCGTGCCCATGACGTGGCTGCCCTTACCATCAAAGGCAACTCTGCCATCCTCAATTTCCCCGAACTCGCCGCCTCATTCCCCCGCCCCGCCTCATCCTCCCCCCGCGATGTACAATCTGCTGCCGCTTTGGCTGCCTCAATGCAACTCCCTAATATCCCTTCTCTGCCACCGCCATTTTCGTCATCGATCGAATTGGACGAGTCAACGCCCGAGGAGCTGAGTGAAATCGTGGAGCTGCCGAGTTTGGGGACCAGTTACGAGGAATCGACCGAGTTCGTGTGCGACGAGTGGTTGTATACTTATGGGCCGTGGTATCAAAATCAAAGCACCAGGGAAGAAAAAGAAGAAGCTTATGAATACTTTAGAGATCAAATCACAATGGTGGAACCAGAGTGTTTGATTCAACCTTTACCTTTCTCGTGGTAACATTAAATTGTCTGTGAATTTGTTGTGTGATATTTTATTTCTTAATTTAAATTAAATGTGAAGTTCTTTTACAATTTTTTTAAAAGGGACTAAAAAACAATTATTATAATTAGGAGTCTTGTAAAGTGGG

mRNA sequence

TTTTGTACCCCCTCAACATTTTAGCCTCTCTCTCTCTCTCGTAAATGTGTGTTGATTACGTGTCAGATTTATATTGACGCCATGCAATTTGATTTGGCCAATGGTGCTTGTTTAAAATCCCCCCAATCTTTTACTCAAACTTCAATTACTCTTCACTCTCATACACGTTTCCATTCACTCTCTCCCTAAATTTCTAACCAATAATAACTCCGATCGGTCCCGAATGGTGGACGCCACCGTGCCAGAGACCGACTCGGGTGGCGCCAATTCCTCGTCCTCATCCTCCTCCTATCTCTCGCCTTCATGTTCCATCTCGTCTCCCCCAAAACAAGGCAATACCATGCACAAGGGAAGGCGTGAAGAAATCAGCAGCAACAACAATCCACACCCAATTTACCGCGGTGTTCGAAAGAGGGCGTGGGGCAAATGGGTGTCGGAAATTCGAGAACCCAAGAAGAAGAGTCGGATTTGGTTGGGTACCTTCGCAACGCCTGAAATGGCGGCGCGTGCCCATGACGTGGCTGCCCTTACCATCAAAGGCAACTCTGCCATCCTCAATTTCCCCGAACTCGCCGCCTCATTCCCCCGCCCCGCCTCATCCTCCCCCCGCGATGTACAATCTGCTGCCGCTTTGGCTGCCTCAATGCAACTCCCTAATATCCCTTCTCTGCCACCGCCATTTTCGTCATCGATCGAATTGGACGAGTCAACGCCCGAGGAGCTGAGTGAAATCGTGGAGCTGCCGAGTTTGGGGACCAGTTACGAGGAATCGACCGAGTTCGTGTGCGACGAGTGGTTGTATACTTATGGGCCGTGGTATCAAAATCAAAGCACCAGGGAAGAAAAAGAAGAAGCTTATGAATACTTTAGAGATCAAATCACAATGGTGGAACCAGAGTGTTTGATTCAACCTTTACCTTTCTCGTGGTAACATTAAATTGTCTGTGAATTTGTTGTGTGATATTTTATTTCTTAATTTAAATTAAATGTGAAGTTCTTTTACAATTTTTTTAAAAGGGACTAAAAAACAATTATTATAATTAGGAGTCTTGTAAAGTGGG

Coding sequence (CDS)

ATGGTGGACGCCACCGTGCCAGAGACCGACTCGGGTGGCGCCAATTCCTCGTCCTCATCCTCCTCCTATCTCTCGCCTTCATGTTCCATCTCGTCTCCCCCAAAACAAGGCAATACCATGCACAAGGGAAGGCGTGAAGAAATCAGCAGCAACAACAATCCACACCCAATTTACCGCGGTGTTCGAAAGAGGGCGTGGGGCAAATGGGTGTCGGAAATTCGAGAACCCAAGAAGAAGAGTCGGATTTGGTTGGGTACCTTCGCAACGCCTGAAATGGCGGCGCGTGCCCATGACGTGGCTGCCCTTACCATCAAAGGCAACTCTGCCATCCTCAATTTCCCCGAACTCGCCGCCTCATTCCCCCGCCCCGCCTCATCCTCCCCCCGCGATGTACAATCTGCTGCCGCTTTGGCTGCCTCAATGCAACTCCCTAATATCCCTTCTCTGCCACCGCCATTTTCGTCATCGATCGAATTGGACGAGTCAACGCCCGAGGAGCTGAGTGAAATCGTGGAGCTGCCGAGTTTGGGGACCAGTTACGAGGAATCGACCGAGTTCGTGTGCGACGAGTGGTTGTATACTTATGGGCCGTGGTATCAAAATCAAAGCACCAGGGAAGAAAAAGAAGAAGCTTATGAATACTTTAGAGATCAAATCACAATGGTGGAACCAGAGTGTTTGATTCAACCTTTACCTTTCTCGTGGTAA

Protein sequence

MVDATVPETDSGGANSSSSSSSYLSPSCSISSPPKQGNTMHKGRREEISSNNNPHPIYRGVRKRAWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLPNIPSLPPPFSSSIELDESTPEELSEIVELPSLGTSYEESTEFVCDEWLYTYGPWYQNQSTREEKEEAYEYFRDQITMVEPECLIQPLPFSW

Homology

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BLAST of Sed0007458.1 vs. NCBI nr
Match: XP_022937478.1 (dehydration-responsive element-binding protein 3-like [Cucurbita moschata])

HSP 1 Score: 332.8 bits (852), Expect = 2.4e-87
Identity = 189/256 (73.83%), Postives = 197/256 (76.95%), Query Frame = 0


Query: 1   MVDATVPETDSGGANSSSSSSSYLSPSCSISSPPKQGNTMHKGRREEISS---NNNPHPI 60
           M +ATVPETD GG NSS SSS       S SS PKQG T  K  RE  SS   +NN HPI
Sbjct: 1   MANATVPETDLGGVNSSPSSS-------SSSSRPKQGGTQLKRGRENSSSSSNDNNRHPI 60

Query: 61  YRGVRKRAWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELA 120
           YRGVR R WGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELA
Sbjct: 61  YRGVRMRVWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELA 120

Query: 121 ASFPRPASSSPRDVQSAAALAASMQLPNIPSLP-------------PPFSSSIELDESTP 180
           ASFPRP SSSPRDVQ AA LAASMQLPN+   P             PP SSS ELDESTP
Sbjct: 121 ASFPRPVSSSPRDVQFAAGLAASMQLPNVDPPPPPPPLSPSSQSPSPPLSSSSELDESTP 180

Query: 181 EELSEIVELPSLGTSYEESTEFVCDEWLYTYGPWYQNQSTR-EEKEEAYEYFRDQITMVE 236
           EELSEIV+LPSLGTSYEES EFVCDEW Y+ GPWYQNQS R EE+EEAYEYFRDQ+ M E
Sbjct: 181 EELSEIVKLPSLGTSYEESGEFVCDEWQYSCGPWYQNQSRREEEEEEAYEYFRDQMVMAE 240

[Close]

BLAST of Sed0007458.1 vs. NCBI nr
Match: KAG7021299.1 (Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 332.4 bits (851), Expect = 3.1e-87
Identity = 189/257 (73.54%), Postives = 197/257 (76.65%), Query Frame = 0


Query: 1   MVDATVPETDSGGANSSSSSSSYLSPSCSISSPPKQGNTMHKGRREEISS----NNNPHP 60
           M +ATVPETD GG NSS SSS       S SS PKQG T  K  RE  SS    +NN HP
Sbjct: 1   MANATVPETDLGGVNSSPSSS-------SSSSRPKQGGTQLKRGRENSSSSSSNDNNRHP 60

Query: 61  IYRGVRKRAWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPEL 120
           IYRGVR R WGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPEL
Sbjct: 61  IYRGVRMRVWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPEL 120

Query: 121 AASFPRPASSSPRDVQSAAALAASMQLPNIPSLP-------------PPFSSSIELDEST 180
           AASFPRP SSSPRDVQ AA LAASMQLPN+   P             PP SSS ELDEST
Sbjct: 121 AASFPRPVSSSPRDVQFAAGLAASMQLPNVDPPPPPPPLSPSSQSPSPPLSSSSELDEST 180

Query: 181 PEELSEIVELPSLGTSYEESTEFVCDEWLYTYGPWYQNQSTR-EEKEEAYEYFRDQITMV 236
           PEELSEIV+LPSLGTSYEES EFVCDEW Y+ GPWYQNQS R EE+EEAYEYFRDQ+ M 
Sbjct: 181 PEELSEIVKLPSLGTSYEESGEFVCDEWQYSCGPWYQNQSRREEEEEEAYEYFRDQMVMA 240

[Close]

BLAST of Sed0007458.1 vs. NCBI nr
Match: XP_022965898.1 (ethylene-responsive transcription factor ERF037-like [Cucurbita maxima])

HSP 1 Score: 332.0 bits (850), Expect = 4.1e-87
Identity = 189/257 (73.54%), Postives = 196/257 (76.26%), Query Frame = 0


Query: 1   MVDATVPETDSGGANSSSSSSSYLSPSCSISSPPKQGNTMHKGRRE----EISSNNNPHP 60
           M +ATVPETD GG NSS SSS       S SS  KQG T  K RRE      S+NNN HP
Sbjct: 1   MANATVPETDLGGVNSSPSSS-------SSSSRAKQGGTQLKRRRENNNSSSSNNNNRHP 60

Query: 61  IYRGVRKRAWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPEL 120
           IYRGVR R WGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPEL
Sbjct: 61  IYRGVRMRVWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPEL 120

Query: 121 AASFPRPASSSPRDVQSAAALAASMQLPNIPSLP-------------PPFSSSIELDEST 180
           AASFPRP SSSPRDVQ AA LAASMQLPN+   P             PP SSS ELDEST
Sbjct: 121 AASFPRPVSSSPRDVQFAAGLAASMQLPNVDPPPPPPPLSPSSQSPSPPLSSSSELDEST 180

Query: 181 PEELSEIVELPSLGTSYEESTEFVCDEWLYTYGPWYQNQSTR-EEKEEAYEYFRDQITMV 236
           PEELSEIV+LPSLGTSYEES EFVCDEW Y  GPWYQNQS R EE+EEAYEYFRDQ+ M 
Sbjct: 181 PEELSEIVKLPSLGTSYEESGEFVCDEWQYICGPWYQNQSRREEEEEEAYEYFRDQMAMA 240

[Close]

BLAST of Sed0007458.1 vs. NCBI nr
Match: XP_038890490.1 (ethylene-responsive transcription factor ERF039-like [Benincasa hispida])

HSP 1 Score: 331.3 bits (848), Expect = 7.0e-87
Identity = 189/254 (74.41%), Postives = 204/254 (80.31%), Query Frame = 0


Query: 1   MVDATVPETDSGGANSSSSSSSYLSPSCSISSPPKQGNTMHKGRREEISSNNNPHPIYRG 60
           M DATVPETDSGGANSSSSSSS  S SCSIS   K      + +R+  SSNN+ HP YRG
Sbjct: 1   MADATVPETDSGGANSSSSSSSSSSTSCSISPSSKL-----RLKRDRESSNNSRHPSYRG 60

Query: 61  VRKRAWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELAASF 120
           VR RAWGKWVSEIREPKKKSRIWLGTFATP+MAARAHDVAALTIKGNSAILNFPELAAS 
Sbjct: 61  VRMRAWGKWVSEIREPKKKSRIWLGTFATPDMAARAHDVAALTIKGNSAILNFPELAASL 120

Query: 121 PRPASSSPRDVQSAAALAASMQLPNIPSLP---------PPFSSSIELDESTPEELSEIV 180
           PRPASSSPRDVQSAAALAASMQLP++ S P         PPFSSS ELDESTPEELSEIV
Sbjct: 121 PRPASSSPRDVQSAAALAASMQLPDVISSPPPPPPPPSSPPFSSSPELDESTPEELSEIV 180

Query: 181 ELPSLGTSYEES----TEFVCDEWLYTYGPWYQ-NQSTREEKEEAYEYFRDQITMVEPEC 236
           ELPSLGT YE+S    TEFV DEW Y+YGPW Q N+S++EE+EEAYEYF DQ+ M E EC
Sbjct: 181 ELPSLGTGYEKSVESVTEFVFDEWQYSYGPWDQENKSSKEEEEEAYEYFIDQMAMAEREC 240

[Close]

BLAST of Sed0007458.1 vs. NCBI nr
Match: KAG6586444.1 (Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 330.1 bits (845), Expect = 1.6e-86
Identity = 187/256 (73.05%), Postives = 196/256 (76.56%), Query Frame = 0


Query: 1   MVDATVPETDSGGANSSSSSSSYLSPSCSISSPPKQGNTMHKGRREEISS---NNNPHPI 60
           M +ATVPETD GG NSS SSS       S SS PK+G T  K  RE  SS   +NN HPI
Sbjct: 1   MANATVPETDLGGVNSSPSSS-------SSSSRPKEGGTQLKRGRENSSSSSNDNNRHPI 60

Query: 61  YRGVRKRAWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELA 120
           YRGVR R WGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELA
Sbjct: 61  YRGVRMRVWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELA 120

Query: 121 ASFPRPASSSPRDVQSAAALAASMQLPNIPSLP-------------PPFSSSIELDESTP 180
           ASFPRP SSSPRDVQ AA LAASMQLPN+   P             PP SSS ELDESTP
Sbjct: 121 ASFPRPVSSSPRDVQFAAGLAASMQLPNVDPPPPPPPLSPSSQSPSPPLSSSSELDESTP 180

Query: 181 EELSEIVELPSLGTSYEESTEFVCDEWLYTYGPWYQNQSTR-EEKEEAYEYFRDQITMVE 236
           EELSEIV+LPSLGTSYEES EFVCDEW Y+ GPWYQNQS R EE+EE YEYFRDQ+ M E
Sbjct: 181 EELSEIVKLPSLGTSYEESGEFVCDEWQYSCGPWYQNQSRREEEEEEVYEYFRDQMVMAE 240

[Close]

BLAST of Sed0007458.1 vs. ExPASy Swiss-Prot
Match: O80654 (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 GN=ERF037 PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.0e-40
Identity = 118/238 (49.58%), Postives = 138/238 (57.98%), Query Frame = 0


Query: 19  SSSSYLSPSCSISSPPKQGNTMHK--GRREEISSNNNPHPIYRGVRKRAWGKWVSEIREP 78
           + SS +S   S   P ++ +  H+    R          P YRGVR R WGKWVSEIREP
Sbjct: 2   TESSIISVKQSSPVPEEEDHHHHQQDSHRTNTKKRVRSDPGYRGVRMRTWGKWVSEIREP 61

Query: 79  KKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAA 138
           +KKSRIWLGTF+TPEMAARAHD AALTIKG SA+LNFPELA   PRPASSSPRDVQ+AAA
Sbjct: 62  RKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAAA 121

Query: 139 LAASMQL-PNIPSL-------------------------PPPFSSSIELDESTPEELSEI 198
           +AA+M   P+  SL                             S S E   ST EELSEI
Sbjct: 122 VAAAMDFSPSSSSLVVSDPTTVIAPAETQLSSSSYSTCTSSSLSPSSEEAASTAEELSEI 181

Query: 199 VELPSLGTSYEES-TEFVCDEWLY-TYGPWYQNQSTREEKEEAYEYFRDQ--ITMVEP 225
           VELPSL TSY+ES +EFV  +  Y    PWY N         ++ Y  D+  I+M EP
Sbjct: 182 VELPSLETSYDESLSEFVYVDSAYPPSSPWYINNC------YSFYYHSDENGISMAEP 233

[Close]

BLAST of Sed0007458.1 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.9e-39
Identity = 98/182 (53.85%), Postives = 120/182 (65.93%), Query Frame = 0


Query: 25  SPSCSISSPPKQGNTMHKGRREEISSNNNPHPIYRGVRKRAWGKWVSEIREPKKKSRIWL 84
           S S S+S   K   +  K +R     ++  HP+YRGVR R WGKWVSEIREP+KKSRIWL
Sbjct: 21  SESDSVSDKSKAEQSEKKTKR---GRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWL 80

Query: 85  GTFATPEMAARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLP 144
           GTF TPEMAARAHDVAAL+IKG +AILNFPELA SFPRP S SPRD+Q+AA  AA M+  
Sbjct: 81  GTFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPT 140

Query: 145 NIPSLPPPFSSSI-------------ELDESTPEELSEIVELPSLGTSYEESTEFVCDEW 194
              S     SSS+             +L  +  EEL EIVELPSLG SY+  +  + +E+
Sbjct: 141 TSFSSSTSSSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSANLGNEF 199

[Close]

BLAST of Sed0007458.1 vs. ExPASy Swiss-Prot
Match: Q9LU18 (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 GN=ERF036 PE=2 SV=2)

HSP 1 Score: 164.1 bits (414), Expect = 1.9e-39
Identity = 102/192 (53.12%), Postives = 135/192 (70.31%), Query Frame = 0


Query: 4   ATVPETDSGGANSSSSSSSYLSPSCSISSPPKQGNTMHKGRREE---ISSNNNPHPIYRG 63
           A+   + S  +++++++S++LS      +PP+  NT  K RR+     SS++  HP+YRG
Sbjct: 8   ASPTSSSSDQSDATTTTSTHLSEE---EAPPRNNNT-RKRRRDSSSASSSSSMQHPVYRG 67

Query: 64  VRKRAWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELAASF 123
           VR R+WGKWVSEIR+P+KK+RIWLGTF T +MAARAHDVAALTIKG+SA+LNFPELA+ F
Sbjct: 68  VRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPELASLF 127

Query: 124 PRPASSSPRDVQSAAALAASM-------QLPNIPSLPPPFSSSIELDESTPEE-LSEIVE 183
           PRPASSSP D+Q+AAA AA+M       +    P  PP   SS    ES  EE L +IVE
Sbjct: 128 PRPASSSPHDIQTAAAEAAAMVVEEKLLEKDEAPEAPPSSESSYVAAESEDEERLEKIVE 187

[Close]

BLAST of Sed0007458.1 vs. ExPASy Swiss-Prot
Match: Q39127 (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 7.4e-39
Identity = 91/146 (62.33%), Postives = 106/146 (72.60%), Query Frame = 0


Query: 51  NNNPHPIYRGVRKRAWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAI 110
           ++  HP+YRGVRKR WGKWVSEIREP+KKSRIWLGTF +PEMAARAHDVAAL+IKG SAI
Sbjct: 29  DSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAI 88

Query: 111 LNFPELAASFPRPASSSPRDVQSAAALAASMQLPN--IPSLPPPFSSS---------IEL 170
           LNFP+LA SFPRP+S SPRD+Q AA  AA M+       S    FSSS         +  
Sbjct: 89  LNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQSSSSLESLVSS 148

Query: 171 DESTPEELSEIVELPSLGTSYEESTE 186
             +  EEL EIVELPSLG+SY+  T+
Sbjct: 149 SATGSEELGEIVELPSLGSSYDGLTQ 174

[Close]

BLAST of Sed0007458.1 vs. ExPASy Swiss-Prot
Match: Q9M080 (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 GN=ERF043 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.3e-35
Identity = 88/164 (53.66%), Postives = 103/164 (62.80%), Query Frame = 0


Query: 52  NNPHPIYRGVRKRAWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAIL 111
           NN  P+YRGVR R+WGKWVSEIREP+KKSRIWLGTF T EMA RAHDVAA++IKG SAIL
Sbjct: 13  NNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKGTSAIL 72

Query: 112 NFPELAASFPRPASSSPRDVQSAAALAASMQL---------------------------P 171
           NFPEL+   PRP S SPRDV++AA  AA M                              
Sbjct: 73  NFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFRSDTETSETTTSNKMSESSESNE 132

Query: 172 NIPSLPPPFSSSIELDEST-PEELSEIVELPSLGTSYEESTEFV 188
            +      +SS   ++EST  ++L EIV+LPSLGTS  ES EFV
Sbjct: 133 TVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLNESNEFV 176

[Close]

BLAST of Sed0007458.1 vs. ExPASy TrEMBL
Match: A0A6J1FG56 (dehydration-responsive element-binding protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111443880 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 1.2e-87
Identity = 189/256 (73.83%), Postives = 197/256 (76.95%), Query Frame = 0


Query: 1   MVDATVPETDSGGANSSSSSSSYLSPSCSISSPPKQGNTMHKGRREEISS---NNNPHPI 60
           M +ATVPETD GG NSS SSS       S SS PKQG T  K  RE  SS   +NN HPI
Sbjct: 1   MANATVPETDLGGVNSSPSSS-------SSSSRPKQGGTQLKRGRENSSSSSNDNNRHPI 60

Query: 61  YRGVRKRAWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELA 120
           YRGVR R WGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELA
Sbjct: 61  YRGVRMRVWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELA 120

Query: 121 ASFPRPASSSPRDVQSAAALAASMQLPNIPSLP-------------PPFSSSIELDESTP 180
           ASFPRP SSSPRDVQ AA LAASMQLPN+   P             PP SSS ELDESTP
Sbjct: 121 ASFPRPVSSSPRDVQFAAGLAASMQLPNVDPPPPPPPLSPSSQSPSPPLSSSSELDESTP 180

Query: 181 EELSEIVELPSLGTSYEESTEFVCDEWLYTYGPWYQNQSTR-EEKEEAYEYFRDQITMVE 236
           EELSEIV+LPSLGTSYEES EFVCDEW Y+ GPWYQNQS R EE+EEAYEYFRDQ+ M E
Sbjct: 181 EELSEIVKLPSLGTSYEESGEFVCDEWQYSCGPWYQNQSRREEEEEEAYEYFRDQMVMAE 240

[Close]

BLAST of Sed0007458.1 vs. ExPASy TrEMBL
Match: A0A6J1HQA9 (ethylene-responsive transcription factor ERF037-like OS=Cucurbita maxima OX=3661 GN=LOC111465646 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 2.0e-87
Identity = 189/257 (73.54%), Postives = 196/257 (76.26%), Query Frame = 0


Query: 1   MVDATVPETDSGGANSSSSSSSYLSPSCSISSPPKQGNTMHKGRRE----EISSNNNPHP 60
           M +ATVPETD GG NSS SSS       S SS  KQG T  K RRE      S+NNN HP
Sbjct: 1   MANATVPETDLGGVNSSPSSS-------SSSSRAKQGGTQLKRRRENNNSSSSNNNNRHP 60

Query: 61  IYRGVRKRAWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPEL 120
           IYRGVR R WGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPEL
Sbjct: 61  IYRGVRMRVWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPEL 120

Query: 121 AASFPRPASSSPRDVQSAAALAASMQLPNIPSLP-------------PPFSSSIELDEST 180
           AASFPRP SSSPRDVQ AA LAASMQLPN+   P             PP SSS ELDEST
Sbjct: 121 AASFPRPVSSSPRDVQFAAGLAASMQLPNVDPPPPPPPLSPSSQSPSPPLSSSSELDEST 180

Query: 181 PEELSEIVELPSLGTSYEESTEFVCDEWLYTYGPWYQNQSTR-EEKEEAYEYFRDQITMV 236
           PEELSEIV+LPSLGTSYEES EFVCDEW Y  GPWYQNQS R EE+EEAYEYFRDQ+ M 
Sbjct: 181 PEELSEIVKLPSLGTSYEESGEFVCDEWQYICGPWYQNQSRREEEEEEAYEYFRDQMAMA 240

[Close]

BLAST of Sed0007458.1 vs. ExPASy TrEMBL
Match: A0A6J1KHB4 (ethylene-responsive transcription factor ERF039-like OS=Cucurbita maxima OX=3661 GN=LOC111493859 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 7.8e-84
Identity = 183/248 (73.79%), Postives = 198/248 (79.84%), Query Frame = 0


Query: 1   MVDATVPETDSGGANSSSS-SSSYLSPSCSISSPPKQGNTMHKGRREEISSNNNPHPIYR 60
           M +ATVPE+DSGG+NSSSS SSS  S SCSISSP K+       R  EIS+N+  HPIYR
Sbjct: 1   MSNATVPESDSGGSNSSSSTSSSSFSTSCSISSPTKKAGGCRPKRAREISTNSR-HPIYR 60

Query: 61  GVRKRAWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELAAS 120
           GVR RAWGKWVSEIREPKKKSRIWLGTFATP+MAARAHDVAALTIKGNSAILNFPELAAS
Sbjct: 61  GVRMRAWGKWVSEIREPKKKSRIWLGTFATPDMAARAHDVAALTIKGNSAILNFPELAAS 120

Query: 121 FPRPASSSPRDVQSAAALAASMQLPNIPSLP--------PPFSSSIELDESTPEELSEIV 180
            PRPASSSPRDVQSAAALAASMQLPN P  P        PPF+SS EL+ESTPEELSEIV
Sbjct: 121 LPRPASSSPRDVQSAAALAASMQLPNAPPPPPPLPPPSSPPFTSSSELEESTPEELSEIV 180

Query: 181 ELPSLGTSYEES----TEFVCDEWLYTYGPWYQNQSTREEKEEAYEYFRDQITMVEPECL 236
            LPSLGTSYEES    TE V DEW Y+YG W QNQS++EE+EEAYE+F DQ+ M E    
Sbjct: 181 VLPSLGTSYEESSESVTELVFDEWQYSYGLWDQNQSSKEEEEEAYEFFIDQMAMAEKS-- 240

[Close]

BLAST of Sed0007458.1 vs. ExPASy TrEMBL
Match: A0A5D3CFH4 (Dehydration-responsive element-binding protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00480 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 5.1e-83
Identity = 183/254 (72.05%), Postives = 199/254 (78.35%), Query Frame = 0


Query: 1   MVDATVPETDSGGANSSSSSSSYLSPSCSISSPPKQGNTMHKGRREEISSNNNPHPIYRG 60
           M +ATVP+TDSGGANSSSSSSS  S S SISSP KQ     + +R   SSNN+ HP YRG
Sbjct: 1   MANATVPDTDSGGANSSSSSSS--STSGSISSPSKQAIGDRRPKRGRESSNNSAHPSYRG 60

Query: 61  VRKRAWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELAASF 120
           VR RAWGKWVSEIREPKKKSRIWLGTFATP+MAARAHDVAALTIKGNSAILNFPELAASF
Sbjct: 61  VRMRAWGKWVSEIREPKKKSRIWLGTFATPDMAARAHDVAALTIKGNSAILNFPELAASF 120

Query: 121 PRPASSSPRDVQSAAALAASMQLPNI--------PSLP--PPFSSSIELDESTPEELSEI 180
           PRPASSSPRDVQSAAALAASMQLP++        PS P  PP SSS ELD+STPEELSEI
Sbjct: 121 PRPASSSPRDVQSAAALAASMQLPDVMISPPPPPPSPPSSPPCSSSSELDQSTPEELSEI 180

Query: 181 VELPSLGTSYEES----TEFVCDEWLYTYGPWYQNQSTREEKEEAYEYFRDQITMVEPEC 236
           V LPSLGT Y+ES    TEFV DEW Y+YGPW Q + + +E+EE YEYF DQ  M E EC
Sbjct: 181 VVLPSLGTGYDESAESVTEFVFDEWQYSYGPWDQEKESSKEEEEGYEYFIDQTAMAEREC 240

[Close]

BLAST of Sed0007458.1 vs. ExPASy TrEMBL
Match: A0A1S3C7X6 (dehydration-responsive element-binding protein 3-like OS=Cucumis melo OX=3656 GN=LOC103497991 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 5.1e-83
Identity = 183/254 (72.05%), Postives = 199/254 (78.35%), Query Frame = 0


Query: 1   MVDATVPETDSGGANSSSSSSSYLSPSCSISSPPKQGNTMHKGRREEISSNNNPHPIYRG 60
           M +ATVP+TDSGGANSSSSSSS  S S SISSP KQ     + +R   SSNN+ HP YRG
Sbjct: 1   MANATVPDTDSGGANSSSSSSS--STSGSISSPSKQAIGDRRPKRGRESSNNSAHPSYRG 60

Query: 61  VRKRAWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELAASF 120
           VR RAWGKWVSEIREPKKKSRIWLGTFATP+MAARAHDVAALTIKGNSAILNFPELAASF
Sbjct: 61  VRMRAWGKWVSEIREPKKKSRIWLGTFATPDMAARAHDVAALTIKGNSAILNFPELAASF 120

Query: 121 PRPASSSPRDVQSAAALAASMQLPNI--------PSLP--PPFSSSIELDESTPEELSEI 180
           PRPASSSPRDVQSAAALAASMQLP++        PS P  PP SSS ELD+STPEELSEI
Sbjct: 121 PRPASSSPRDVQSAAALAASMQLPDVMISPPPPPPSPPSSPPCSSSSELDQSTPEELSEI 180

Query: 181 VELPSLGTSYEES----TEFVCDEWLYTYGPWYQNQSTREEKEEAYEYFRDQITMVEPEC 236
           V LPSLGT Y+ES    TEFV DEW Y+YGPW Q + + +E+EE YEYF DQ  M E EC
Sbjct: 181 VVLPSLGTGYDESAESVTEFVFDEWQYSYGPWDQEKESSKEEEEGYEYFIDQTAMAEREC 240

[Close]

BLAST of Sed0007458.1 vs. TAIR 10
Match: AT1G77200.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 168.3 bits (425), Expect = 7.3e-42
Identity = 118/238 (49.58%), Postives = 138/238 (57.98%), Query Frame = 0


Query: 19  SSSSYLSPSCSISSPPKQGNTMHK--GRREEISSNNNPHPIYRGVRKRAWGKWVSEIREP 78
           + SS +S   S   P ++ +  H+    R          P YRGVR R WGKWVSEIREP
Sbjct: 2   TESSIISVKQSSPVPEEEDHHHHQQDSHRTNTKKRVRSDPGYRGVRMRTWGKWVSEIREP 61

Query: 79  KKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAA 138
           +KKSRIWLGTF+TPEMAARAHD AALTIKG SA+LNFPELA   PRPASSSPRDVQ+AAA
Sbjct: 62  RKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAAA 121

Query: 139 LAASMQL-PNIPSL-------------------------PPPFSSSIELDESTPEELSEI 198
           +AA+M   P+  SL                             S S E   ST EELSEI
Sbjct: 122 VAAAMDFSPSSSSLVVSDPTTVIAPAETQLSSSSYSTCTSSSLSPSSEEAASTAEELSEI 181

Query: 199 VELPSLGTSYEES-TEFVCDEWLY-TYGPWYQNQSTREEKEEAYEYFRDQ--ITMVEP 225
           VELPSL TSY+ES +EFV  +  Y    PWY N         ++ Y  D+  I+M EP
Sbjct: 182 VELPSLETSYDESLSEFVYVDSAYPPSSPWYINNC------YSFYYHSDENGISMAEP 233

[Close]

BLAST of Sed0007458.1 vs. TAIR 10
Match: AT3G16280.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 164.1 bits (414), Expect = 1.4e-40
Identity = 102/192 (53.12%), Postives = 135/192 (70.31%), Query Frame = 0


Query: 4   ATVPETDSGGANSSSSSSSYLSPSCSISSPPKQGNTMHKGRREE---ISSNNNPHPIYRG 63
           A+   + S  +++++++S++LS      +PP+  NT  K RR+     SS++  HP+YRG
Sbjct: 8   ASPTSSSSDQSDATTTTSTHLSEE---EAPPRNNNT-RKRRRDSSSASSSSSMQHPVYRG 67

Query: 64  VRKRAWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELAASF 123
           VR R+WGKWVSEIR+P+KK+RIWLGTF T +MAARAHDVAALTIKG+SA+LNFPELA+ F
Sbjct: 68  VRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPELASLF 127

Query: 124 PRPASSSPRDVQSAAALAASM-------QLPNIPSLPPPFSSSIELDESTPEE-LSEIVE 183
           PRPASSSP D+Q+AAA AA+M       +    P  PP   SS    ES  EE L +IVE
Sbjct: 128 PRPASSSPHDIQTAAAEAAAMVVEEKLLEKDEAPEAPPSSESSYVAAESEDEERLEKIVE 187

[Close]

BLAST of Sed0007458.1 vs. TAIR 10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 164.1 bits (414), Expect = 1.4e-40
Identity = 98/182 (53.85%), Postives = 120/182 (65.93%), Query Frame = 0


Query: 25  SPSCSISSPPKQGNTMHKGRREEISSNNNPHPIYRGVRKRAWGKWVSEIREPKKKSRIWL 84
           S S S+S   K   +  K +R     ++  HP+YRGVR R WGKWVSEIREP+KKSRIWL
Sbjct: 21  SESDSVSDKSKAEQSEKKTKR---GRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWL 80

Query: 85  GTFATPEMAARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLP 144
           GTF TPEMAARAHDVAAL+IKG +AILNFPELA SFPRP S SPRD+Q+AA  AA M+  
Sbjct: 81  GTFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPT 140

Query: 145 NIPSLPPPFSSSI-------------ELDESTPEELSEIVELPSLGTSYEESTEFVCDEW 194
              S     SSS+             +L  +  EEL EIVELPSLG SY+  +  + +E+
Sbjct: 141 TSFSSSTSSSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSANLGNEF 199

[Close]

BLAST of Sed0007458.1 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 162.2 bits (409), Expect = 5.2e-40
Identity = 91/146 (62.33%), Postives = 106/146 (72.60%), Query Frame = 0


Query: 51  NNNPHPIYRGVRKRAWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAI 110
           ++  HP+YRGVRKR WGKWVSEIREP+KKSRIWLGTF +PEMAARAHDVAAL+IKG SAI
Sbjct: 29  DSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAI 88

Query: 111 LNFPELAASFPRPASSSPRDVQSAAALAASMQLPN--IPSLPPPFSSS---------IEL 170
           LNFP+LA SFPRP+S SPRD+Q AA  AA M+       S    FSSS         +  
Sbjct: 89  LNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQSSSSLESLVSS 148

Query: 171 DESTPEELSEIVELPSLGTSYEESTE 186
             +  EEL EIVELPSLG+SY+  T+
Sbjct: 149 SATGSEELGEIVELPSLGSSYDGLTQ 174

[Close]

BLAST of Sed0007458.1 vs. TAIR 10
Match: AT4G32800.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 151.4 bits (381), Expect = 9.2e-37
Identity = 88/164 (53.66%), Postives = 103/164 (62.80%), Query Frame = 0


Query: 52  NNPHPIYRGVRKRAWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAIL 111
           NN  P+YRGVR R+WGKWVSEIREP+KKSRIWLGTF T EMA RAHDVAA++IKG SAIL
Sbjct: 13  NNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKGTSAIL 72

Query: 112 NFPELAASFPRPASSSPRDVQSAAALAASMQL---------------------------P 171
           NFPEL+   PRP S SPRDV++AA  AA M                              
Sbjct: 73  NFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFRSDTETSETTTSNKMSESSESNE 132

Query: 172 NIPSLPPPFSSSIELDEST-PEELSEIVELPSLGTSYEESTEFV 188
            +      +SS   ++EST  ++L EIV+LPSLGTS  ES EFV
Sbjct: 133 TVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLNESNEFV 176

The following BLAST results are available for this feature:

BLAST of Sed0007458.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937478.1	2.4e-87	73.83	dehydration-responsive element-binding protein 3-like [Cucurbita moschata]	[more]
KAG7021299.1	3.1e-87	73.54	Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperm...	[more]
XP_022965898.1	4.1e-87	73.54	ethylene-responsive transcription factor ERF037-like [Cucurbita maxima]	[more]
XP_038890490.1	7.0e-87	74.41	ethylene-responsive transcription factor ERF039-like [Benincasa hispida]	[more]
KAG6586444.1	1.6e-86	73.05	Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperm...	[more]

BLAST of Sed0007458.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80654	1.0e-40	49.58	Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LYD3	1.9e-39	53.85	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LU18	1.9e-39	53.13	Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q39127	7.4e-39	62.33	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9M080	1.3e-35	53.66	Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Sed0007458.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FG56	1.2e-87	73.83	dehydration-responsive element-binding protein 3-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1HQA9	2.0e-87	73.54	ethylene-responsive transcription factor ERF037-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1KHB4	7.8e-84	73.79	ethylene-responsive transcription factor ERF039-like OS=Cucurbita maxima OX=3661...	[more]
A0A5D3CFH4	5.1e-83	72.05	Dehydration-responsive element-binding protein 3-like OS=Cucumis melo var. makuw...	[more]
A0A1S3C7X6	5.1e-83	72.05	dehydration-responsive element-binding protein 3-like OS=Cucumis melo OX=3656 GN...	[more]

BLAST of Sed0007458.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77200.1	7.3e-42	49.58	Integrase-type DNA-binding superfamily protein	[more]
AT3G16280.1	1.4e-40	53.13	Integrase-type DNA-binding superfamily protein	[more]
AT5G11590.1	1.4e-40	53.85	Integrase-type DNA-binding superfamily protein	[more]
AT5G25810.1	5.2e-40	62.33	Integrase-type DNA-binding superfamily protein	[more]
AT4G32800.1	9.2e-37	53.66	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 58..69 score: 70.61 coord: 80..96 score: 66.42
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 57..120 e-value: 2.4E-36 score: 136.8
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 56..106 e-value: 3.8E-14 score: 52.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 57..114 score: 23.287817
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 56..116 e-value: 1.28708E-32 score: 111.209
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 57..115 e-value: 7.7E-25 score: 88.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..38
None	No IPR available	PANTHER	PTHR31985:SF177	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE	coord: 16..221
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 16..221
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 57..115

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0007458	Sed0007458	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0007458.1-five_prime_utr	Sed0007458.1-five_prime_utr-LG11:512499..512721	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0007458.1-exon	Sed0007458.1-exon-LG11:512499..513559	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0007458.1-cds	Sed0007458.1-cds-LG11:512722..513429	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0007458.1-three_prime_utr	Sed0007458.1-three_prime_utr-LG11:513430..513559	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0007458.1	Sed0007458.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity