Sed0006632.1 (mRNA) Chayote v1

Overview


Name	Sed0006632.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Protein of unknown function (DUF1218)
Location	LG03: 7179564 .. 7181087 (+)
Sequence length	925
RNA-Seq Expression	Sed0006632.1
Synteny	Sed0006632.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCATCCCAAAAGCAAAGATATTATTTCTAGTAAGAAGAGGAGAAACTGCCGCCGAAGATCTGAGATTTCACCGGAGTTGGATAAGTTTCAGGCAGTACAACAATGGCGGTTTCTTTGGGCGTCGTCGCCGTAATCGCCTCTCTGTATCTCATCGCCTTCGTTTTCGCCATCGGAGCTGAAATGCGCCGGAGCACGGTATCTCCTTCTCTCTCTCTCTCTCTCTCTCTCGCTCTTCACTGTTTTTTACTCTGAAATCGAACCTTACGGAAGCTTCTATGTTCTTGTTTCTGTGCGTTTATGAACCGAAACAGGCAAAGGTAGAGCCGGATGAGTACGACGAGACTACTCACTGCGTCTACGATTCCGATGCGTCGACGACGTACGGTCTTGTGGCGTTTGGTTTGGTGTTGATTAGCCACGCCGTGCTCATGGCTGTCACGAGGTGCCTCTGCTGCGGCAAAGGCTTGAAAAATGGAGGATCTACGGTCTGCGCCATCATCCTCTTCGTCGTTTCTTGGTACTGTTTTCTCTTCAGCCTCTTTCTTTAGGTATTATGAAATTGATGTCTGGAATTCGTTGCGCTTCTCGAATTTGAACTGTTTTCAGCGTAGTTCTGTTGATCAGAGGGCTTGTCTAGTACTTTACTGAAATCTATCTTCCTTAAACAAACCTATTTGATTTTGTTATAGAATTTCATTGAAATGAACTTCAATTCTACTCAGTTCATATGGAAATGATTTTATGCCTAATTGATTATCATTGGTTTAGTTAAATAAAGTTCTAATCAGGTGTTGAATTGGATATACTTAGTTCAGTTTCAAATCTCTGTATGAGGATATGATTCAAAGCTTCCTATATAGTTTGGCAGTATGAATTGGTGCTGGTAACAACTCTGCTAAGTCTTAAATCAACTATTAAATCCAAGTTGATTCATTGTGGTAAACCTAATCTCTTTTCAATGCTTCTTAATGCTAAATTTTGAAAAAAAAAATGAAACTAGGCTTCTCTTCTTGGGGGCTGAAACATTGTTGCTGGCTGGGTCTGTGAGGAATGCCTACCACACCAAGTACAAAAAAGCGTTGCCCTTCAAGAACTTGTCGTGTGTCATGCTTCGCCGCGGGGTGTTTGCCGCTGCAGCAGCCTTGACGTTTCTGTCGTTGGTGTTTTCAATCCTTTACTACTTGACGCATTCAAAAGCTGATACGGGAGGCTGGCAGAAGCACCAGAATGAAGGTGTTGGCATGGTGCCTCCTAATCACGAGCAGCACGGTCGACAAACAGGTGAATTCGACAAAGTATAACTATGACAGGATTTAGCTGAATGTGCACTAGAGGACTGTATGCTGGGAAATACAAGTAGAACAAAGTATCAACTTGTTCTTGCTAAACTGCGAATATGTAAAGTGGTATGATACATAATCTAGGTGTGGAAAATGTAGCTGGTATATCATATATGTTTCGGTTTTTAATTGTGAACTCAAGGTTCAATACTTAATATAATTAATGATTGGATCTTTTTGGGAC

mRNA sequence

GCATCCCAAAAGCAAAGATATTATTTCTAGTAAGAAGAGGAGAAACTGCCGCCGAAGATCTGAGATTTCACCGGAGTTGGATAAGTTTCAGGCAGTACAACAATGGCGGTTTCTTTGGGCGTCGTCGCCGTAATCGCCTCTCTGTATCTCATCGCCTTCGTTTTCGCCATCGGAGCTGAAATGCGCCGGAGCACGGCAAAGGTAGAGCCGGATGAGTACGACGAGACTACTCACTGCGTCTACGATTCCGATGCGTCGACGACGTACGGTCTTGTGGCGTTTGGTTTGGTGTTGATTAGCCACGCCGTGCTCATGGCTGTCACGAGGTGCCTCTGCTGCGGCAAAGGCTTGAAAAATGGAGGATCTACGGTCTGCGCCATCATCCTCTTCGTCGTTTCTTGGCTTCTCTTCTTGGGGGCTGAAACATTGTTGCTGGCTGGGTCTGTGAGGAATGCCTACCACACCAAGTACAAAAAAGCGTTGCCCTTCAAGAACTTGTCGTGTGTCATGCTTCGCCGCGGGGTGTTTGCCGCTGCAGCAGCCTTGACGTTTCTGTCGTTGGTGTTTTCAATCCTTTACTACTTGACGCATTCAAAAGCTGATACGGGAGGCTGGCAGAAGCACCAGAATGAAGGTGTTGGCATGGTGCCTCCTAATCACGAGCAGCACGGTCGACAAACAGGTGAATTCGACAAAGTATAACTATGACAGGATTTAGCTGAATGTGCACTAGAGGACTGTATGCTGGGAAATACAAGTAGAACAAAGTATCAACTTGTTCTTGCTAAACTGCGAATATGTAAAGTGGTATGATACATAATCTAGGTGTGGAAAATGTAGCTGGTATATCATATATGTTTCGGTTTTTAATTGTGAACTCAAGGTTCAATACTTAATATAATTAATGATTGGATCTTTTTGGGAC

Coding sequence (CDS)

ATGGCGGTTTCTTTGGGCGTCGTCGCCGTAATCGCCTCTCTGTATCTCATCGCCTTCGTTTTCGCCATCGGAGCTGAAATGCGCCGGAGCACGGCAAAGGTAGAGCCGGATGAGTACGACGAGACTACTCACTGCGTCTACGATTCCGATGCGTCGACGACGTACGGTCTTGTGGCGTTTGGTTTGGTGTTGATTAGCCACGCCGTGCTCATGGCTGTCACGAGGTGCCTCTGCTGCGGCAAAGGCTTGAAAAATGGAGGATCTACGGTCTGCGCCATCATCCTCTTCGTCGTTTCTTGGCTTCTCTTCTTGGGGGCTGAAACATTGTTGCTGGCTGGGTCTGTGAGGAATGCCTACCACACCAAGTACAAAAAAGCGTTGCCCTTCAAGAACTTGTCGTGTGTCATGCTTCGCCGCGGGGTGTTTGCCGCTGCAGCAGCCTTGACGTTTCTGTCGTTGGTGTTTTCAATCCTTTACTACTTGACGCATTCAAAAGCTGATACGGGAGGCTGGCAGAAGCACCAGAATGAAGGTGTTGGCATGGTGCCTCCTAATCACGAGCAGCACGGTCGACAAACAGGTGAATTCGACAAAGTATAA

Protein sequence

MAVSLGVVAVIASLYLIAFVFAIGAEMRRSTAKVEPDEYDETTHCVYDSDASTTYGLVAFGLVLISHAVLMAVTRCLCCGKGLKNGGSTVCAIILFVVSWLLFLGAETLLLAGSVRNAYHTKYKKALPFKNLSCVMLRRGVFAAAAALTFLSLVFSILYYLTHSKADTGGWQKHQNEGVGMVPPNHEQHGRQTGEFDKV

Homology

[Close]

BLAST of Sed0006632.1 vs. NCBI nr
Match: KAG7016734.1 (hypothetical protein SDJN02_21844 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 332.4 bits (851), Expect = 2.7e-87
Identity = 170/201 (84.58%), Postives = 183/201 (91.04%), Query Frame = 0


Query: 1   MAVSLGVVAVIASLYLIAFVFAIGAEMRRSTAKVEPDEYDETTHCVYDSDASTTYGLVAF 60
           MA SL  VA+IASL+LIAFVFAIGAEMRRSTA V+PDEYDETTHCVYDSDAST YGLVAF
Sbjct: 1   MATSLATVAIIASLHLIAFVFAIGAEMRRSTATVQPDEYDETTHCVYDSDASTVYGLVAF 60

Query: 61  GLVLISHAVLMAVTRCLCCGKGLKNGGSTVCAIILFVVSWLLFLGAETLLLAGSVRNAYH 120
           GL+LISH VLM VTRCLCCGKGLK+GGSTVCAIILF+VSW LFLGAE+LLLAGSVRNAYH
Sbjct: 61  GLLLISHTVLMVVTRCLCCGKGLKSGGSTVCAIILFIVSWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYKKALPFKNLSCVMLRRGVFAAAAALTFLSLVFSILYYLTHSKADTGGWQKHQNEGVG 180
           TK++ ALP KNLSC MLRRGVFAAAAALTFLSLVFSILYY+ HS+ADTGGWQKHQNEGVG
Sbjct: 121 TKFRGALPIKNLSCSMLRRGVFAAAAALTFLSLVFSILYYIAHSRADTGGWQKHQNEGVG 180

Query: 181 MVPPN---HEQHGRQTGEFDK 199
           MVPP+   HEQH R TG F+K
Sbjct: 181 MVPPSFSGHEQHDRSTGGFEK 201

[Close]

BLAST of Sed0006632.1 vs. NCBI nr
Match: XP_022939105.1 (uncharacterized protein LOC111445108 [Cucurbita moschata])

HSP 1 Score: 332.4 bits (851), Expect = 2.7e-87
Identity = 170/201 (84.58%), Postives = 183/201 (91.04%), Query Frame = 0


Query: 1   MAVSLGVVAVIASLYLIAFVFAIGAEMRRSTAKVEPDEYDETTHCVYDSDASTTYGLVAF 60
           MA SL  VA+IASL+LIAFVFAIGAEMRRSTA V+PDEYDETTHCVYDSDAST YGLVAF
Sbjct: 1   MATSLASVAIIASLHLIAFVFAIGAEMRRSTATVQPDEYDETTHCVYDSDASTVYGLVAF 60

Query: 61  GLVLISHAVLMAVTRCLCCGKGLKNGGSTVCAIILFVVSWLLFLGAETLLLAGSVRNAYH 120
           GL+LISH VLM VTRCLCCGKGLK+GGSTVCAIILF+VSW LFLGAE+LLLAGSVRNAYH
Sbjct: 61  GLLLISHTVLMVVTRCLCCGKGLKSGGSTVCAIILFIVSWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYKKALPFKNLSCVMLRRGVFAAAAALTFLSLVFSILYYLTHSKADTGGWQKHQNEGVG 180
           TK++ ALP KNLSC MLRRGVFAAAAALTFLSLVFSILYY+ HS+ADTGGWQKHQNEGVG
Sbjct: 121 TKFRGALPIKNLSCSMLRRGVFAAAAALTFLSLVFSILYYIAHSRADTGGWQKHQNEGVG 180

Query: 181 MVPPN---HEQHGRQTGEFDK 199
           MVPP+   HEQH R TG F+K
Sbjct: 181 MVPPSFSGHEQHDRSTGRFEK 201

[Close]

BLAST of Sed0006632.1 vs. NCBI nr
Match: KAG6579221.1 (hypothetical protein SDJN03_23669, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 331.6 bits (849), Expect = 4.5e-87
Identity = 170/201 (84.58%), Postives = 183/201 (91.04%), Query Frame = 0


Query: 1   MAVSLGVVAVIASLYLIAFVFAIGAEMRRSTAKVEPDEYDETTHCVYDSDASTTYGLVAF 60
           MA SL  VA+IASL+LIAFVFAIGAEMRRSTA V+PDEYDETTHCVYDSDAST YGLVAF
Sbjct: 1   MATSLASVAIIASLHLIAFVFAIGAEMRRSTATVQPDEYDETTHCVYDSDASTVYGLVAF 60

Query: 61  GLVLISHAVLMAVTRCLCCGKGLKNGGSTVCAIILFVVSWLLFLGAETLLLAGSVRNAYH 120
           GL+LISH VLM VTRCLCCGKGLK+GGSTVCAIILF+VSW LFLGAE+LLLAGSVRNAYH
Sbjct: 61  GLLLISHTVLMVVTRCLCCGKGLKSGGSTVCAIILFIVSWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYKKALPFKNLSCVMLRRGVFAAAAALTFLSLVFSILYYLTHSKADTGGWQKHQNEGVG 180
           TK++ ALP KNLSC MLRRGVFAAAAALTFLSLVFSILYY+ HS+ADTGGWQKHQNEGVG
Sbjct: 121 TKFRGALPIKNLSCSMLRRGVFAAAAALTFLSLVFSILYYIVHSRADTGGWQKHQNEGVG 180

Query: 181 MVPPN---HEQHGRQTGEFDK 199
           MVPP+   HEQH R TG F+K
Sbjct: 181 MVPPSFSGHEQHDRSTGGFEK 201

[Close]

BLAST of Sed0006632.1 vs. NCBI nr
Match: XP_022992987.1 (uncharacterized protein LOC111489148 [Cucurbita maxima])

HSP 1 Score: 330.5 bits (846), Expect = 1.0e-86
Identity = 169/201 (84.08%), Postives = 183/201 (91.04%), Query Frame = 0


Query: 1   MAVSLGVVAVIASLYLIAFVFAIGAEMRRSTAKVEPDEYDETTHCVYDSDASTTYGLVAF 60
           MA SL  VA+IASL+LIAFVFAIGAEMRRSTA V+PDEYDETTHCVYDSDAST YGLVAF
Sbjct: 1   MATSLASVAIIASLHLIAFVFAIGAEMRRSTATVQPDEYDETTHCVYDSDASTVYGLVAF 60

Query: 61  GLVLISHAVLMAVTRCLCCGKGLKNGGSTVCAIILFVVSWLLFLGAETLLLAGSVRNAYH 120
           GL+LISH VLM VTRCLCCGKGLK+GGSTVCAIILF+VSW LFLGAE+LLLAGSVRNAYH
Sbjct: 61  GLLLISHTVLMVVTRCLCCGKGLKSGGSTVCAIILFIVSWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYKKALPFKNLSCVMLRRGVFAAAAALTFLSLVFSILYYLTHSKADTGGWQKHQNEGVG 180
           TK++ ALP KNLSC MLRRGVFAAAAALTFLSLVFSILYY+ HS+ADTGGW+KHQNEGVG
Sbjct: 121 TKFRGALPIKNLSCSMLRRGVFAAAAALTFLSLVFSILYYIAHSRADTGGWEKHQNEGVG 180

Query: 181 MVPPN---HEQHGRQTGEFDK 199
           MVPP+   HEQH R TG F+K
Sbjct: 181 MVPPSFSGHEQHDRSTGGFEK 201

[Close]

BLAST of Sed0006632.1 vs. NCBI nr
Match: XP_023550275.1 (uncharacterized protein LOC111808498 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 329.3 bits (843), Expect = 2.2e-86
Identity = 169/201 (84.08%), Postives = 182/201 (90.55%), Query Frame = 0


Query: 1   MAVSLGVVAVIASLYLIAFVFAIGAEMRRSTAKVEPDEYDETTHCVYDSDASTTYGLVAF 60
           MA SL  VA+IASL+LIAFVFAIGAEMRRSTA V+PDEYDETTHCVYDSDAST YGLVAF
Sbjct: 1   MATSLASVAIIASLHLIAFVFAIGAEMRRSTATVQPDEYDETTHCVYDSDASTVYGLVAF 60

Query: 61  GLVLISHAVLMAVTRCLCCGKGLKNGGSTVCAIILFVVSWLLFLGAETLLLAGSVRNAYH 120
           GL+LISH VLM VTRCLCCGKGLK+GGSTVCAIILF+VSW L LGAE+LLLAGSVRNAYH
Sbjct: 61  GLLLISHTVLMVVTRCLCCGKGLKSGGSTVCAIILFIVSWHLLLGAESLLLAGSVRNAYH 120

Query: 121 TKYKKALPFKNLSCVMLRRGVFAAAAALTFLSLVFSILYYLTHSKADTGGWQKHQNEGVG 180
           TK++ ALP KNLSC MLRRGVFAAAAALTFLSLVFSILYY+ HS+ADTGGWQKHQNEGVG
Sbjct: 121 TKFRGALPIKNLSCSMLRRGVFAAAAALTFLSLVFSILYYIAHSRADTGGWQKHQNEGVG 180

Query: 181 MVPPN---HEQHGRQTGEFDK 199
           MVPP+   HEQH R TG F+K
Sbjct: 181 MVPPSFSGHEQHDRSTGGFEK 201

[Close]

BLAST of Sed0006632.1 vs. ExPASy TrEMBL
Match: A0A6J1FLQ5 (uncharacterized protein LOC111445108 OS=Cucurbita moschata OX=3662 GN=LOC111445108 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.3e-87
Identity = 170/201 (84.58%), Postives = 183/201 (91.04%), Query Frame = 0


Query: 1   MAVSLGVVAVIASLYLIAFVFAIGAEMRRSTAKVEPDEYDETTHCVYDSDASTTYGLVAF 60
           MA SL  VA+IASL+LIAFVFAIGAEMRRSTA V+PDEYDETTHCVYDSDAST YGLVAF
Sbjct: 1   MATSLASVAIIASLHLIAFVFAIGAEMRRSTATVQPDEYDETTHCVYDSDASTVYGLVAF 60

Query: 61  GLVLISHAVLMAVTRCLCCGKGLKNGGSTVCAIILFVVSWLLFLGAETLLLAGSVRNAYH 120
           GL+LISH VLM VTRCLCCGKGLK+GGSTVCAIILF+VSW LFLGAE+LLLAGSVRNAYH
Sbjct: 61  GLLLISHTVLMVVTRCLCCGKGLKSGGSTVCAIILFIVSWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYKKALPFKNLSCVMLRRGVFAAAAALTFLSLVFSILYYLTHSKADTGGWQKHQNEGVG 180
           TK++ ALP KNLSC MLRRGVFAAAAALTFLSLVFSILYY+ HS+ADTGGWQKHQNEGVG
Sbjct: 121 TKFRGALPIKNLSCSMLRRGVFAAAAALTFLSLVFSILYYIAHSRADTGGWQKHQNEGVG 180

Query: 181 MVPPN---HEQHGRQTGEFDK 199
           MVPP+   HEQH R TG F+K
Sbjct: 181 MVPPSFSGHEQHDRSTGRFEK 201

[Close]

BLAST of Sed0006632.1 vs. ExPASy TrEMBL
Match: A0A6J1JRH3 (uncharacterized protein LOC111489148 OS=Cucurbita maxima OX=3661 GN=LOC111489148 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.9e-87
Identity = 169/201 (84.08%), Postives = 183/201 (91.04%), Query Frame = 0


Query: 1   MAVSLGVVAVIASLYLIAFVFAIGAEMRRSTAKVEPDEYDETTHCVYDSDASTTYGLVAF 60
           MA SL  VA+IASL+LIAFVFAIGAEMRRSTA V+PDEYDETTHCVYDSDAST YGLVAF
Sbjct: 1   MATSLASVAIIASLHLIAFVFAIGAEMRRSTATVQPDEYDETTHCVYDSDASTVYGLVAF 60

Query: 61  GLVLISHAVLMAVTRCLCCGKGLKNGGSTVCAIILFVVSWLLFLGAETLLLAGSVRNAYH 120
           GL+LISH VLM VTRCLCCGKGLK+GGSTVCAIILF+VSW LFLGAE+LLLAGSVRNAYH
Sbjct: 61  GLLLISHTVLMVVTRCLCCGKGLKSGGSTVCAIILFIVSWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYKKALPFKNLSCVMLRRGVFAAAAALTFLSLVFSILYYLTHSKADTGGWQKHQNEGVG 180
           TK++ ALP KNLSC MLRRGVFAAAAALTFLSLVFSILYY+ HS+ADTGGW+KHQNEGVG
Sbjct: 121 TKFRGALPIKNLSCSMLRRGVFAAAAALTFLSLVFSILYYIAHSRADTGGWEKHQNEGVG 180

Query: 181 MVPPN---HEQHGRQTGEFDK 199
           MVPP+   HEQH R TG F+K
Sbjct: 181 MVPPSFSGHEQHDRSTGGFEK 201

[Close]

BLAST of Sed0006632.1 vs. ExPASy TrEMBL
Match: A0A6J1DHA0 (uncharacterized protein LOC111020044 OS=Momordica charantia OX=3673 GN=LOC111020044 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.8e-82
Identity = 165/203 (81.28%), Postives = 180/203 (88.67%), Query Frame = 0


Query: 1   MAVSLGVVAVIASLYLIAFVFAIGAEMRRSTAKVEPDEYDETTHCVYDSDASTTYGLVAF 60
           MA SL V+A+IASL+LIAFV AIGAEMRRSTA V PDEYDETTHCVYDSDAST YGL AF
Sbjct: 1   MATSLSVIAIIASLHLIAFVLAIGAEMRRSTATVVPDEYDETTHCVYDSDASTAYGLSAF 60

Query: 61  GLVLISHAVLMAVTRCLCCGKGLKNGGSTVCAIILFVVSWLLFLGAETLLLAGSVRNAYH 120
           GL+LISH +LMAVTRCLCCGKGLK+GGSTVCAI+LFVVSW LFLGAE+LLLAGSVRNAYH
Sbjct: 61  GLLLISHTLLMAVTRCLCCGKGLKSGGSTVCAIVLFVVSWSLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYKKALPFKNLSCVMLRRGVFAAAAALTFLSLVFSILYYLTHSKADTGGWQKHQNE-GV 180
           TK++ ALP KNLSC  LR GVFAAAAA+TFLSLVFSILYYLTHS+ADTGGWQKHQNE GV
Sbjct: 121 TKFRGALPIKNLSCTTLRCGVFAAAAAITFLSLVFSILYYLTHSRADTGGWQKHQNEGGV 180

Query: 181 GMVPPN---HEQHGRQTGEFDKV 200
           GMV  +   HEQH R+T  F+KV
Sbjct: 181 GMVASDIAQHEQHDRRTAGFEKV 203

[Close]

BLAST of Sed0006632.1 vs. ExPASy TrEMBL
Match: A0A0A0KV04 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576780 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.0e-80
Identity = 158/202 (78.22%), Postives = 174/202 (86.14%), Query Frame = 0


Query: 1   MAVSLGVVAVIASLYLIAFVFAIGAEMRRSTAKVEPDEYDETTHCVYDSDASTTYGLVAF 60
           MA SL V+ +IASL+LIAFVFAIGAEMRRSTA V PD+YDETT+CVYDSDAST YGLVAF
Sbjct: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTAAVVPDKYDETTYCVYDSDASTVYGLVAF 60

Query: 61  GLVLISHAVLMAVTRCLCCGKGLKNGGSTVCAIILFVVSWLLFLGAETLLLAGSVRNAYH 120
           GL+LIS  VLM VTRCLCCGKGL++GGSTVCA+I F++SW LFLGAE+LLLAGSVRNAYH
Sbjct: 61  GLLLISQTVLMVVTRCLCCGKGLRSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYKKALPFKNLSCVMLRRGVFAAAAALTFLSLVFSILYYLTHSKADTGGWQKHQNEGVG 180
           TKY+  LP  NLSC MLRRGVFAAAAALTFLSLVFSILYY  HS+ADTGGWQKHQNEG+G
Sbjct: 121 TKYRSVLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIG 180

Query: 181 MVP---PNHEQHGRQTGEFDKV 200
           M P   P  EQH R+  EF KV
Sbjct: 181 MGPSNLPQQEQHERRAEEFGKV 202

[Close]

BLAST of Sed0006632.1 vs. ExPASy TrEMBL
Match: A0A1S3CSX8 (uncharacterized protein LOC103504596 OS=Cucumis melo OX=3656 GN=LOC103504596 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.6e-80
Identity = 157/202 (77.72%), Postives = 176/202 (87.13%), Query Frame = 0


Query: 1   MAVSLGVVAVIASLYLIAFVFAIGAEMRRSTAKVEPDEYDETTHCVYDSDASTTYGLVAF 60
           MA +L V+ +IASL+LIAFVFAIGAEMRRSTA+V PD+YDETT+CVYDSDAST YGLVAF
Sbjct: 1   MATNLFVIVIIASLHLIAFVFAIGAEMRRSTAEVVPDKYDETTYCVYDSDASTVYGLVAF 60

Query: 61  GLVLISHAVLMAVTRCLCCGKGLKNGGSTVCAIILFVVSWLLFLGAETLLLAGSVRNAYH 120
           GL+LIS  VLM VTRCLCCGKGLK+GGSTVCA+I F++SW LFLGAE+LLLAGSVRNAYH
Sbjct: 61  GLLLISQTVLMVVTRCLCCGKGLKSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYKKALPFKNLSCVMLRRGVFAAAAALTFLSLVFSILYYLTHSKADTGGWQKHQNEGVG 180
           TKY+ +LP  NLSC MLRRGVFAAAAALTFLSLVFSILYY  HS+ADTGGWQKHQNEG+G
Sbjct: 121 TKYRSSLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIG 180

Query: 181 MVP---PNHEQHGRQTGEFDKV 200
           M P   P  E H R+  EF+KV
Sbjct: 181 MGPSNLPQQELHERRAEEFEKV 202

[Close]

BLAST of Sed0006632.1 vs. TAIR 10
Match: AT1G68220.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 216.5 bits (550), Expect = 2.0e-56
Identity = 119/202 (58.91%), Postives = 148/202 (73.27%), Query Frame = 0


Query: 1   MAVSLGVVAVIASLYLIAFVFAIGAEMRRSTAKVEPDEYDETTHCVYDSDASTTYGLVAF 60
           MAVS+ ++ V+ +L+L+AFVFA GAE RRSTA   PD+YDE T C Y ++AST YG+ AF
Sbjct: 1   MAVSVSILTVVTALHLLAFVFAFGAERRRSTAVPVPDQYDEKTICKYGTEASTVYGMSAF 60

Query: 61  GLVLISHAVLMAVTRCLCCGKGLKNGGS-TVCAIILFVVSWLLFLGAETLLLAGSVRNAY 120
           GL+L+S AV+  VT+CLC GKGL  G S TV AI+ FVVSW+ FLGAE  LL GS RNAY
Sbjct: 61  GLLLVSQAVVNGVTKCLCFGKGLVTGTSYTVWAIVFFVVSWVSFLGAEACLLGGSARNAY 120

Query: 121 HTKYKKALPFKNLSCVMLRRGVFAAAAALTFLSLVFSILYYLTHSKADTGGWQKHQNEG- 180
           HTK +     K LSC +L  GVFAA AA T +SL+ +ILYYL HSKADTGGW+KHQN+G 
Sbjct: 121 HTKSEGIYKGKELSCAVLPVGVFAAGAAFTLMSLIATILYYLAHSKADTGGWEKHQNDGI 180

Query: 181 -VGMVPPNHEQHGRQTGEFDKV 200
            +GM  P+ +   +Q  EF+KV
Sbjct: 181 NIGMTTPS-DAPKQQNTEFNKV 201

[Close]

BLAST of Sed0006632.1 vs. TAIR 10
Match: AT1G52910.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 150.2 bits (378), Expect = 1.7e-36
Identity = 80/169 (47.34%), Postives = 107/169 (63.31%), Query Frame = 0


Query: 7   VVAVIASLYLIAFVFAIGAEMRRSTAKVEPDEYDETTHCVYDSDASTTYGLVAFGLVLIS 66
           V+ ++  L LIA   AI AE RRS  KV PD   E  HC Y SD +T+YG  AF L+ IS
Sbjct: 6   VIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFVLLFIS 65

Query: 67  HAVLMAVTRCLCCGKGLKNGGSTVCAIILFVVSWLLFLGAETLLLAGSVRNAYHTKYKKA 126
             ++M  +RC CCGK LK GGS  C I+LF++ W+ FL AE  LLAGS+RNAYHT Y++ 
Sbjct: 66  QVIIMVASRCFCCGKALKPGGSRACGIMLFLICWVFFLIAEVCLLAGSIRNAYHTTYRRM 125

Query: 127 LPFKN-LSCVMLRRGVFAAAAALTFLSLVFSILYYLTHSKADTGGWQKH 175
              +N  SC ++R+GVFAA A+    + + S  YY+++S+A  G    H
Sbjct: 126 WNIENPPSCEVIRKGVFAAGASFALFTAIVSQFYYISYSRARDGYQTPH 174

[Close]

BLAST of Sed0006632.1 vs. TAIR 10
Match: AT3G15480.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 147.1 bits (370), Expect = 1.5e-35
Identity = 79/161 (49.07%), Postives = 107/161 (66.46%), Query Frame = 0


Query: 7   VVAVIASLYLIAFVFAIGAEMRRSTAKVEPDEYDETTHCVYDSDASTTYGLVAFGLVLIS 66
           VV ++  L LIA   AI AE RRS  KVE D   +  +CVY +D +T+YG  AF L+ +S
Sbjct: 6   VVIIVFILDLIAVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFVLLFVS 65

Query: 67  HAVLMAVTRCLCCGKGLKNGGSTVCAIILFVVSWLLFLGAETLLLAGSVRNAYHTKYKKA 126
             ++MA +RC CCGK L  GGS  CAIILF++ W+ FL AE  LLA S+RNAYHT+Y+K 
Sbjct: 66  QVLIMAASRCFCCGKSLNPGGSRACAIILFLICWVFFLIAEMCLLAASIRNAYHTQYRKM 125

Query: 127 LPFKN-LSCVMLRRGVFAAAAALTFLSLVFSILYYLTHSKA 167
              ++  SC ++R+GVFAA AA T  + + S  YY+ +S+A
Sbjct: 126 WKVEDPPSCEVIRKGVFAAGAAFTLFTAIVSQFYYVCYSRA 166

[Close]

BLAST of Sed0006632.1 vs. TAIR 10
Match: AT4G27435.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 142.1 bits (357), Expect = 4.7e-34
Identity = 79/160 (49.38%), Postives = 100/160 (62.50%), Query Frame = 0


Query: 7   VVAVIASLYLIAFVFAIGAEMRRSTAKVEPDEYDETTHCVYDSDASTTYGLVAFGLVLIS 66
           V A++    LIAF  A+ AE RRSTA+V  D   +  +CVYDSD +T YG+ AF   + S
Sbjct: 6   VSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFLFSVAS 65

Query: 67  HAVLMAVTRCLCCGKGLKNGGSTVCAIILFVVSWLLFLGAETLLLAGSVRNAYHTKYKKA 126
             ++M V+RC CCGK LK GGS   A+ILF+VSW+ FL AE  LLAGSV NAYHTKY+  
Sbjct: 66  QILIMLVSRCFCCGKPLKPGGSRALALILFIVSWMFFLIAEICLLAGSVENAYHTKYRTM 125

Query: 127 LPFKNLSCVMLRRGVFAAAAALTFLSLVFSILYYLTHSKA 167
                  C  LR+GVFAA A+  F + + S  YY  +  A
Sbjct: 126 FMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFFYFSA 165

[Close]

BLAST of Sed0006632.1 vs. TAIR 10
Match: AT1G13380.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 127.9 bits (320), Expect = 9.3e-30
Identity = 69/160 (43.12%), Postives = 100/160 (62.50%), Query Frame = 0


Query: 7   VVAVIASLYLIAFVFAIGAEMRRSTAKVEPDEYDETTHCVYDSDASTTYGLVAFGLVLIS 66
           V  ++ +L L+AF F+I AE RRS  K   D    TT CVYDSD +T YG+ AF  +L S
Sbjct: 10  VFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGAFLFLLSS 69

Query: 67  HAVLMAVTRCLCCGKGLKNGGSTVCAIILFVVSWLLFLGAETLLLAGSVRNAYHTKYKKA 126
            ++LM+VT+C+C G+ L  G     +II F+ SW+ FL AE  ++AG+ +NAYHTKY   
Sbjct: 70  ESLLMSVTKCMCFGRPLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKNAYHTKY--- 129

Query: 127 LPFKNLSCVMLRRGVFAAAAALTFLSLVFSILYYLTHSKA 167
           L  +  SC  LR+G+F A A     ++V ++ YY+  +K+
Sbjct: 130 LSSQTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKS 166

The following BLAST results are available for this feature:

BLAST of Sed0006632.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016734.1	2.7e-87	84.58	hypothetical protein SDJN02_21844 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022939105.1	2.7e-87	84.58	uncharacterized protein LOC111445108 [Cucurbita moschata]	[more]
KAG6579221.1	4.5e-87	84.58	hypothetical protein SDJN03_23669, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022992987.1	1.0e-86	84.08	uncharacterized protein LOC111489148 [Cucurbita maxima]	[more]
XP_023550275.1	2.2e-86	84.08	uncharacterized protein LOC111808498 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0006632.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0006632.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FLQ5	1.3e-87	84.58	uncharacterized protein LOC111445108 OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]
A0A6J1JRH3	4.9e-87	84.08	uncharacterized protein LOC111489148 OS=Cucurbita maxima OX=3661 GN=LOC111489148...	[more]
A0A6J1DHA0	2.8e-82	81.28	uncharacterized protein LOC111020044 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A0A0KV04	2.0e-80	78.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576780 PE=4 SV=1	[more]
A0A1S3CSX8	2.6e-80	77.72	uncharacterized protein LOC103504596 OS=Cucumis melo OX=3656 GN=LOC103504596 PE=...	[more]

BLAST of Sed0006632.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68220.1	2.0e-56	58.91	Protein of unknown function (DUF1218)	[more]
AT1G52910.1	1.7e-36	47.34	Protein of unknown function (DUF1218)	[more]
AT3G15480.1	1.5e-35	49.07	Protein of unknown function (DUF1218)	[more]
AT4G27435.1	4.7e-34	49.38	Protein of unknown function (DUF1218)	[more]
AT1G13380.1	9.3e-30	43.13	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 59..153 e-value: 2.3E-23 score: 82.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..199
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 3..187
None	No IPR available	PANTHER	PTHR31769:SF63	AEROBIC COPROPORPHYRINOGEN-III OXIDASE (DUF1218)	coord: 3..187

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0006632	Sed0006632	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0006632.1-five_prime_utr	Sed0006632.1-five_prime_utr-LG03:7179564..7179665	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0006632.1-exon	Sed0006632.1-exon-LG03:7179564..7179758	exon
Sed0006632.1-exon	Sed0006632.1-exon-LG03:7179875..7180080	exon
Sed0006632.1-exon	Sed0006632.1-exon-LG03:7180564..7181087	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0006632.1-cds	Sed0006632.1-cds-LG03:7179666..7179758	CDS
Sed0006632.1-cds	Sed0006632.1-cds-LG03:7179875..7180080	CDS
Sed0006632.1-cds	Sed0006632.1-cds-LG03:7180564..7180864	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0006632.1-three_prime_utr	Sed0006632.1-three_prime_utr-LG03:7180865..7181087	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0006632.1	Sed0006632.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane