Sed0006149.1 (mRNA) Chayote v1

Overview


Name	Sed0006149.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	ethylene-responsive transcription factor ERF098-like
Location	LG09: 34210101 .. 34211031 (+)
Sequence length	931
RNA-Seq Expression	Sed0006149.1
Synteny	Sed0006149.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGTGAGTTAATCCCTGACGGCTGAAAACAACCACTCACTAAAAAGCTAAACACAAAACAATCAATTCATCATCTATCATCTTCTTCTTCCCAGAAACTCCCCTCTCCAAACACGACAAATTCAACCTTCAAACATGGCTGACTCCATTTCCACAACATCCAATTCCAATATAAAACACAACAACACATTCCAAAATTACCCCATTATCCAATTTCTCCAATTTCTCCCCTGTTTTTCATTGCTCTGTTTTCACAATCACAACCCACAAAAAAAAATGGAAGGAAAGAGATCGACAAACGAAACTCGTTACCGGGGGATACGGCGGCGGCCATGGGGGAAATTCGCGGCGGAGATTCGAGACCCGTCCAGGAACGGCGCTCGGCTGTGGCTCGGGACGTTCGACACGGCGGAGGCGGCGGCGAGGGCGTACGATCAAGCCGCGTATGCGTTCAGAGGGCGCTTGGCCATTTTGAATTTCCCGAATGAGATCCAAACGGGAAATCCCAACTCGGCGGCGGCGGCGGCGTCTTCTTCGTCGGCGACGGCGATCTCATTTTCCGGCGGGAATGGGAGGCGGCGATCCGGGGAGGTGATTGAGTTTGAGTATTTGGATAATGAGGTTTTGGAAGGGCTTTTGGAATCGGGAGATGAAGGGTTTCATGATCGGAAGAATTGATGGATTTGGAAATGTTGATCAATTTCTAAAATTGGAATGCTCCTAATTATTTACAATATTTTTTTATAATGTGGGATTCATTTTATTTTGTTTTTCAGCTCTTGTACATTTGTTGTACTGCTAGAAAATATTGTTGTTTGTTTGAAACTATTAGAAAACAAAAAGGTTGTGCATTTGTAATCAACTTCTCCTACCTATTGTTATCATAGTATCAGTCAATTTCATTCTTTCAATTAATTAAAGCAAGAATTTAA

mRNA sequence

CCGTGAGTTAATCCCTGACGGCTGAAAACAACCACTCACTAAAAAGCTAAACACAAAACAATCAATTCATCATCTATCATCTTCTTCTTCCCAGAAACTCCCCTCTCCAAACACGACAAATTCAACCTTCAAACATGGCTGACTCCATTTCCACAACATCCAATTCCAATATAAAACACAACAACACATTCCAAAATTACCCCATTATCCAATTTCTCCAATTTCTCCCCTGTTTTTCATTGCTCTGTTTTCACAATCACAACCCACAAAAAAAAATGGAAGGAAAGAGATCGACAAACGAAACTCGTTACCGGGGGATACGGCGGCGGCCATGGGGGAAATTCGCGGCGGAGATTCGAGACCCGTCCAGGAACGGCGCTCGGCTGTGGCTCGGGACGTTCGACACGGCGGAGGCGGCGGCGAGGGCGTACGATCAAGCCGCGTATGCGTTCAGAGGGCGCTTGGCCATTTTGAATTTCCCGAATGAGATCCAAACGGGAAATCCCAACTCGGCGGCGGCGGCGGCGTCTTCTTCGTCGGCGACGGCGATCTCATTTTCCGGCGGGAATGGGAGGCGGCGATCCGGGGAGGTGATTGAGTTTGAGTATTTGGATAATGAGGTTTTGGAAGGGCTTTTGGAATCGGGAGATGAAGGGTTTCATGATCGGAAGAATTGATGGATTTGGAAATGTTGATCAATTTCTAAAATTGGAATGCTCCTAATTATTTACAATATTTTTTTATAATGTGGGATTCATTTTATTTTGTTTTTCAGCTCTTGTACATTTGTTGTACTGCTAGAAAATATTGTTGTTTGTTTGAAACTATTAGAAAACAAAAAGGTTGTGCATTTGTAATCAACTTCTCCTACCTATTGTTATCATAGTATCAGTCAATTTCATTCTTTCAATTAATTAAAGCAAGAATTTAA

Coding sequence (CDS)

ATGGCTGACTCCATTTCCACAACATCCAATTCCAATATAAAACACAACAACACATTCCAAAATTACCCCATTATCCAATTTCTCCAATTTCTCCCCTGTTTTTCATTGCTCTGTTTTCACAATCACAACCCACAAAAAAAAATGGAAGGAAAGAGATCGACAAACGAAACTCGTTACCGGGGGATACGGCGGCGGCCATGGGGGAAATTCGCGGCGGAGATTCGAGACCCGTCCAGGAACGGCGCTCGGCTGTGGCTCGGGACGTTCGACACGGCGGAGGCGGCGGCGAGGGCGTACGATCAAGCCGCGTATGCGTTCAGAGGGCGCTTGGCCATTTTGAATTTCCCGAATGAGATCCAAACGGGAAATCCCAACTCGGCGGCGGCGGCGGCGTCTTCTTCGTCGGCGACGGCGATCTCATTTTCCGGCGGGAATGGGAGGCGGCGATCCGGGGAGGTGATTGAGTTTGAGTATTTGGATAATGAGGTTTTGGAAGGGCTTTTGGAATCGGGAGATGAAGGGTTTCATGATCGGAAGAATTGA

Protein sequence

MADSISTTSNSNIKHNNTFQNYPIIQFLQFLPCFSLLCFHNHNPQKKMEGKRSTNETRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEAAARAYDQAAYAFRGRLAILNFPNEIQTGNPNSAAAAASSSSATAISFSGGNGRRRSGEVIEFEYLDNEVLEGLLESGDEGFHDRKN

Homology

[Close]

BLAST of Sed0006149.1 vs. NCBI nr
Match: XP_008451255.1 (PREDICTED: ethylene-responsive transcription factor ERF098-like [Cucumis melo])

HSP 1 Score: 204.5 bits (519), Expect = 7.6e-49
Identity = 130/215 (60.47%), Postives = 146/215 (67.91%), Query Frame = 0


Query: 1   MADSISTTSNSNIKHNNTFQNYPI-------IQFLQFLPCFSLLCFHNHN---------- 60
           MAD IS+  NS+I  N T  +Y +        + L FL C S   FH+ N          
Sbjct: 1   MADLISSIFNSDI--NTTNLHYLVSRSPNLKSKLLFFLCCSSSALFHSVNKLELNKKKKE 60

Query: 61  --PQKKM-------EGKRSTNETRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEA 120
              ++KM       EGKRSTNE+RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAE 
Sbjct: 61  RRKRRKMEGKRTGNEGKRSTNESRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEE 120

Query: 121 AARAYDQAAYAFRGRLAILNFPNEIQTGNPN-----SAAAAASSSSATAISF----SGGN 180
           AARAYDQAAYAFRG LAILNFPNE Q+GNPN      ++AA  SSS T ISF    SG N
Sbjct: 121 AARAYDQAAYAFRGHLAILNFPNEYQSGNPNFGAGYGSSAAPGSSSTTTISFGGNYSGNN 180

[Close]

BLAST of Sed0006149.1 vs. NCBI nr
Match: XP_038900166.1 (ethylene-responsive transcription factor ERF098-like [Benincasa hispida])

HSP 1 Score: 199.5 bits (506), Expect = 2.4e-47
Identity = 111/141 (78.72%), Postives = 117/141 (82.98%), Query Frame = 0


Query: 49  EGKRSTNETRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEAAARAYDQAAYAFRG 108
           EGKRSTNE RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAE AARAYDQAAYAFRG
Sbjct: 9   EGKRSTNEGRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRG 68

Query: 109 RLAILNFPNEIQTGNPNSA-----AAAASSSSATAISF----SGGNGRRRSGEVIEFEYL 168
            LAILNFPNE Q+GNPN A     + AA SSSAT ISF    SG N  RRS EVIEFEYL
Sbjct: 69  HLAILNFPNEYQSGNPNFAGGFGSSMAAGSSSATTISFAGNYSGNNASRRSREVIEFEYL 128

Query: 169 DNEVLEGLLESGDEGFHDRKN 181
           DNE+LE LL+S DEG+ +RKN
Sbjct: 129 DNELLEELLQSEDEGY-NRKN 148

[Close]

BLAST of Sed0006149.1 vs. NCBI nr
Match: KAA0059645.1 (ethylene-responsive transcription factor ERF098-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 198.7 bits (504), Expect = 4.1e-47
Identity = 109/141 (77.30%), Postives = 117/141 (82.98%), Query Frame = 0


Query: 49  EGKRSTNETRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEAAARAYDQAAYAFRG 108
           EGKRSTNE+RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAE AARAYDQAAYAFRG
Sbjct: 13  EGKRSTNESRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRG 72

Query: 109 RLAILNFPNEIQTGNPN-----SAAAAASSSSATAISF----SGGNGRRRSGEVIEFEYL 168
            LAILNFPNE Q+GNPN      ++AA  SSS T ISF    SG N RR SGEVIEFEYL
Sbjct: 73  HLAILNFPNEYQSGNPNFGAGYGSSAAPGSSSTTTISFGGNYSGNNARRGSGEVIEFEYL 132

Query: 169 DNEVLEGLLESGDEGFHDRKN 181
           DNE+LE LL+S  EG+ +RKN
Sbjct: 133 DNELLEELLQSEGEGY-NRKN 152

[Close]

BLAST of Sed0006149.1 vs. NCBI nr
Match: XP_011659259.1 (ethylene-responsive transcription factor ERF098 [Cucumis sativus])

HSP 1 Score: 197.2 bits (500), Expect = 1.2e-46
Identity = 108/141 (76.60%), Postives = 117/141 (82.98%), Query Frame = 0


Query: 49  EGKRSTNETRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEAAARAYDQAAYAFRG 108
           EGKRSTNE+RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAE AARAYDQAAYAFRG
Sbjct: 9   EGKRSTNESRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRG 68

Query: 109 RLAILNFPNEIQTGNPN-----SAAAAASSSSATAISF----SGGNGRRRSGEVIEFEYL 168
            LAILNFPNE Q+GNPN      ++AA+ SSS T ISF    SG N  R SGEVIEFEYL
Sbjct: 69  HLAILNFPNEYQSGNPNFGAGYGSSAASGSSSTTTISFGGNYSGNNASRGSGEVIEFEYL 128

Query: 169 DNEVLEGLLESGDEGFHDRKN 181
           DNE+LE LL+S  EG+ +RKN
Sbjct: 129 DNELLEELLQSEGEGY-NRKN 148

[Close]

BLAST of Sed0006149.1 vs. NCBI nr
Match: XP_022953322.1 (ethylene-responsive transcription factor ERF098-like [Cucurbita moschata])

HSP 1 Score: 196.8 bits (499), Expect = 1.6e-46
Identity = 109/135 (80.74%), Postives = 113/135 (83.70%), Query Frame = 0


Query: 50  GKRSTNETRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEAAARAYDQAAYAFRGR 109
           GKRSTNE RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAE AARAYDQAAYAFRG 
Sbjct: 10  GKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGH 69

Query: 110 LAILNFPNEIQTGNPNSAAAAASSSSATAISF----SGGNGRRRSGEVIEFEYLDNEVLE 169
           LAILNFPNE Q+GNP+   AAA SSSAT ISF    SG N   RSGEVIEFEYLDNE+LE
Sbjct: 70  LAILNFPNEYQSGNPH--FAAAPSSSATTISFVGNYSGSNANYRSGEVIEFEYLDNELLE 129

Query: 170 GLLESGDEGFHDRKN 181
            LL+S  EGF DR N
Sbjct: 130 ELLQSEGEGF-DRNN 141

[Close]

BLAST of Sed0006149.1 vs. ExPASy Swiss-Prot
Match: Q9LTC5 (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana OX=3702 GN=ERF098 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 5.7e-31
Identity = 74/118 (62.71%), Postives = 90/118 (76.27%), Query Frame = 0


Query: 56  ETRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEAAARAYDQAAYAFRGRLAILNF 115
           + R+RG+RRRPWGKFAAEIRDPSRNGARLWLGTF+TAE AARAYD+AA+  RG LAILNF
Sbjct: 17  QARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNF 76

Query: 116 PNEIQTGNPNSAAA---AASSSSATAISFSGGNGRRRSGEVIEFEYLDNEVLEGLLES 171
           PNE      + +     A+SSSS+++ S S    R+   EV EFEYLD++VLE LL+S
Sbjct: 77  PNEYYPRMDDYSLRPPYASSSSSSSSGSTSTNVSRQNQREVFEFEYLDDKVLEELLDS 134

[Close]

BLAST of Sed0006149.1 vs. ExPASy Swiss-Prot
Match: Q9LTC6 (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana OX=3702 GN=ERF095 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.1e-30
Identity = 72/130 (55.38%), Postives = 94/130 (72.31%), Query Frame = 0


Query: 53  STNETRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEAAARAYDQAAYAFRGRLAI 112
           +TNE +YRG+R+RPWGK+AAEIRD +R+GAR+WLGTF+TAE AARAYD+AA+  RG+ AI
Sbjct: 8   NTNEMKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAI 67

Query: 113 LNFPNEIQ--TGNPNSAAAAASSSSATAISFSGGNGRRRSGEVIEFEYLDNEVLEGLLES 172
           LNFP+E Q     PN +   A +SS++   + GG G     EVIEFEYLD+ +LE LL+ 
Sbjct: 68  LNFPHEYQMMKDGPNGSHENAVASSSS--GYRGGGGGDDGREVIEFEYLDDSLLEELLDY 127

Query: 173 GDEGFHDRKN 181
           G+    D  N
Sbjct: 128 GERSNQDNCN 135

[Close]

BLAST of Sed0006149.1 vs. ExPASy Swiss-Prot
Match: Q9LSX0 (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana OX=3702 GN=ERF096 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.4e-29
Identity = 68/116 (58.62%), Postives = 87/116 (75.00%), Query Frame = 0


Query: 58  RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEAAARAYDQAAYAFRGRLAILNFPN 117
           +YRG+RRRPWGK+AAEIRD  ++G R+WLGTFDTAE AARAYDQAAY+ RG+ AILNFP+
Sbjct: 14  KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPH 73

Query: 118 EIQTGNPNSAAAAASSSSATAISFSGGNGRRRSGEVIEFEYLDNEVLEGLLESGDE 174
           E   G+  S++ A + SS+ + S S       S +V EFEYLD+ VLE LLE G++
Sbjct: 74  EYNMGSGVSSSTAMAGSSSASASASSS-----SRQVFEFEYLDDSVLEELLEEGEK 124

[Close]

BLAST of Sed0006149.1 vs. ExPASy Swiss-Prot
Match: P93822 (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana OX=3702 GN=ERF14 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.0e-28
Identity = 68/123 (55.28%), Postives = 85/123 (69.11%), Query Frame = 0


Query: 50  GKRSTNETRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEAAARAYDQAAYAFRGR 109
           G     + +YRG+RRRPWGK+AAEIRD  ++G R+WLGTFDTAE AARAYD+AAY+ RG+
Sbjct: 11  GGGGAEQGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGK 70

Query: 110 LAILNFPNEIQTGNPNSAAAAASSSSATAISFSGGNGRRRSGEVIEFEYLDNEVLEGLLE 169
            AILNFP+E   G  +S+ AA SSSS              S +V EFEYLD+ VL+ LLE
Sbjct: 71  AAILNFPHEYNMGTGSSSTAANSSSS--------------SQQVFEFEYLDDSVLDELLE 119

Query: 170 SGD 173
            G+
Sbjct: 131 YGE 119

[Close]

BLAST of Sed0006149.1 vs. ExPASy Swiss-Prot
Match: O80338 (Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=ERF2 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.1e-24
Identity = 64/123 (52.03%), Postives = 86/123 (69.92%), Query Frame = 0


Query: 59  YRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEAAARAYDQAAYAFRGRLAILNFPNE 118
           YRG+R+RPWGKFAAEIRDP++NGAR+WLGTF+TAE AA AYD AA+  RG  A+LNFP  
Sbjct: 117 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPLR 176

Query: 119 IQTGNPN--------SAAAAASSSSATAISFSGGNGRRRSGEVIEFEYLDNEVLEGLLES 174
           + +G P+        S+++++SSSS+T+ S +G   RRR       E L +EV++   E 
Sbjct: 177 VNSGEPDPVRITSKRSSSSSSSSSSSTSSSENGKLKRRRKA-----ENLTSEVVQVKCEV 234

[Close]

BLAST of Sed0006149.1 vs. ExPASy TrEMBL
Match: A0A1S3BR43 (ethylene-responsive transcription factor ERF098-like OS=Cucumis melo OX=3656 GN=LOC103492603 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 3.7e-49
Identity = 130/215 (60.47%), Postives = 146/215 (67.91%), Query Frame = 0


Query: 1   MADSISTTSNSNIKHNNTFQNYPI-------IQFLQFLPCFSLLCFHNHN---------- 60
           MAD IS+  NS+I  N T  +Y +        + L FL C S   FH+ N          
Sbjct: 1   MADLISSIFNSDI--NTTNLHYLVSRSPNLKSKLLFFLCCSSSALFHSVNKLELNKKKKE 60

Query: 61  --PQKKM-------EGKRSTNETRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEA 120
              ++KM       EGKRSTNE+RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAE 
Sbjct: 61  RRKRRKMEGKRTGNEGKRSTNESRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEE 120

Query: 121 AARAYDQAAYAFRGRLAILNFPNEIQTGNPN-----SAAAAASSSSATAISF----SGGN 180
           AARAYDQAAYAFRG LAILNFPNE Q+GNPN      ++AA  SSS T ISF    SG N
Sbjct: 121 AARAYDQAAYAFRGHLAILNFPNEYQSGNPNFGAGYGSSAAPGSSSTTTISFGGNYSGNN 180

[Close]

BLAST of Sed0006149.1 vs. ExPASy TrEMBL
Match: A0A5A7V1C7 (Ethylene-responsive transcription factor ERF098-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54G00820 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 2.0e-47
Identity = 109/141 (77.30%), Postives = 117/141 (82.98%), Query Frame = 0


Query: 49  EGKRSTNETRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEAAARAYDQAAYAFRG 108
           EGKRSTNE+RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAE AARAYDQAAYAFRG
Sbjct: 13  EGKRSTNESRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRG 72

Query: 109 RLAILNFPNEIQTGNPN-----SAAAAASSSSATAISF----SGGNGRRRSGEVIEFEYL 168
            LAILNFPNE Q+GNPN      ++AA  SSS T ISF    SG N RR SGEVIEFEYL
Sbjct: 73  HLAILNFPNEYQSGNPNFGAGYGSSAAPGSSSTTTISFGGNYSGNNARRGSGEVIEFEYL 132

Query: 169 DNEVLEGLLESGDEGFHDRKN 181
           DNE+LE LL+S  EG+ +RKN
Sbjct: 133 DNELLEELLQSEGEGY-NRKN 152

[Close]

BLAST of Sed0006149.1 vs. ExPASy TrEMBL
Match: A0A0A0KAA6 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G375830 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 5.8e-47
Identity = 108/141 (76.60%), Postives = 117/141 (82.98%), Query Frame = 0


Query: 49  EGKRSTNETRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEAAARAYDQAAYAFRG 108
           EGKRSTNE+RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAE AARAYDQAAYAFRG
Sbjct: 9   EGKRSTNESRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRG 68

Query: 109 RLAILNFPNEIQTGNPN-----SAAAAASSSSATAISF----SGGNGRRRSGEVIEFEYL 168
            LAILNFPNE Q+GNPN      ++AA+ SSS T ISF    SG N  R SGEVIEFEYL
Sbjct: 69  HLAILNFPNEYQSGNPNFGAGYGSSAASGSSSTTTISFGGNYSGNNASRGSGEVIEFEYL 128

Query: 169 DNEVLEGLLESGDEGFHDRKN 181
           DNE+LE LL+S  EG+ +RKN
Sbjct: 129 DNELLEELLQSEGEGY-NRKN 148

[Close]

BLAST of Sed0006149.1 vs. ExPASy TrEMBL
Match: A0A6J1GMX4 (ethylene-responsive transcription factor ERF098-like OS=Cucurbita moschata OX=3662 GN=LOC111455907 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 7.6e-47
Identity = 109/135 (80.74%), Postives = 113/135 (83.70%), Query Frame = 0


Query: 50  GKRSTNETRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEAAARAYDQAAYAFRGR 109
           GKRSTNE RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAE AARAYDQAAYAFRG 
Sbjct: 10  GKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGH 69

Query: 110 LAILNFPNEIQTGNPNSAAAAASSSSATAISF----SGGNGRRRSGEVIEFEYLDNEVLE 169
           LAILNFPNE Q+GNP+   AAA SSSAT ISF    SG N   RSGEVIEFEYLDNE+LE
Sbjct: 70  LAILNFPNEYQSGNPH--FAAAPSSSATTISFVGNYSGSNANYRSGEVIEFEYLDNELLE 129

Query: 170 GLLESGDEGFHDRKN 181
            LL+S  EGF DR N
Sbjct: 130 ELLQSEGEGF-DRNN 141

[Close]

BLAST of Sed0006149.1 vs. ExPASy TrEMBL
Match: A0A5D3C881 (Ethylene-responsive transcription factor ERF098-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00700 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 3.8e-46
Identity = 107/139 (76.98%), Postives = 115/139 (82.73%), Query Frame = 0


Query: 51  KRSTNETRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEAAARAYDQAAYAFRGRL 110
           KRSTNE+RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAE AARAYDQAAYAFRG L
Sbjct: 8   KRSTNESRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHL 67

Query: 111 AILNFPNEIQTGNPN-----SAAAAASSSSATAISF----SGGNGRRRSGEVIEFEYLDN 170
           AILNFPNE Q+GNPN      ++AA  SSS T ISF    SG N RR SGEVIEFEYLDN
Sbjct: 68  AILNFPNEYQSGNPNFGAGYGSSAAPGSSSTTTISFGGNYSGNNARRGSGEVIEFEYLDN 127

Query: 171 EVLEGLLESGDEGFHDRKN 181
           E+LE LL+S  EG+ +RKN
Sbjct: 128 ELLEELLQSEGEGY-NRKN 145

[Close]

BLAST of Sed0006149.1 vs. TAIR 10
Match: AT3G23230.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 135.6 bits (340), Expect = 4.0e-32
Identity = 74/118 (62.71%), Postives = 90/118 (76.27%), Query Frame = 0


Query: 56  ETRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEAAARAYDQAAYAFRGRLAILNF 115
           + R+RG+RRRPWGKFAAEIRDPSRNGARLWLGTF+TAE AARAYD+AA+  RG LAILNF
Sbjct: 17  QARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNF 76

Query: 116 PNEIQTGNPNSAAA---AASSSSATAISFSGGNGRRRSGEVIEFEYLDNEVLEGLLES 171
           PNE      + +     A+SSSS+++ S S    R+   EV EFEYLD++VLE LL+S
Sbjct: 77  PNEYYPRMDDYSLRPPYASSSSSSSSGSTSTNVSRQNQREVFEFEYLDDKVLEELLDS 134

[Close]

BLAST of Sed0006149.1 vs. TAIR 10
Match: AT3G23220.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 133.7 bits (335), Expect = 1.5e-31
Identity = 72/130 (55.38%), Postives = 94/130 (72.31%), Query Frame = 0


Query: 53  STNETRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEAAARAYDQAAYAFRGRLAI 112
           +TNE +YRG+R+RPWGK+AAEIRD +R+GAR+WLGTF+TAE AARAYD+AA+  RG+ AI
Sbjct: 8   NTNEMKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAI 67

Query: 113 LNFPNEIQ--TGNPNSAAAAASSSSATAISFSGGNGRRRSGEVIEFEYLDNEVLEGLLES 172
           LNFP+E Q     PN +   A +SS++   + GG G     EVIEFEYLD+ +LE LL+ 
Sbjct: 68  LNFPHEYQMMKDGPNGSHENAVASSSS--GYRGGGGGDDGREVIEFEYLDDSLLEELLDY 127

Query: 173 GDEGFHDRKN 181
           G+    D  N
Sbjct: 128 GERSNQDNCN 135

[Close]

BLAST of Sed0006149.1 vs. TAIR 10
Match: AT5G43410.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 130.2 bits (326), Expect = 1.7e-30
Identity = 68/116 (58.62%), Postives = 87/116 (75.00%), Query Frame = 0


Query: 58  RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEAAARAYDQAAYAFRGRLAILNFPN 117
           +YRG+RRRPWGK+AAEIRD  ++G R+WLGTFDTAE AARAYDQAAY+ RG+ AILNFP+
Sbjct: 14  KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPH 73

Query: 118 EIQTGNPNSAAAAASSSSATAISFSGGNGRRRSGEVIEFEYLDNEVLEGLLESGDE 174
           E   G+  S++ A + SS+ + S S       S +V EFEYLD+ VLE LLE G++
Sbjct: 74  EYNMGSGVSSSTAMAGSSSASASASSS-----SRQVFEFEYLDDSVLEELLEEGEK 124

[Close]

BLAST of Sed0006149.1 vs. TAIR 10
Match: AT1G04370.1 (Ethylene-responsive element binding factor 14 )

HSP 1 Score: 127.1 bits (318), Expect = 1.4e-29
Identity = 68/123 (55.28%), Postives = 85/123 (69.11%), Query Frame = 0


Query: 50  GKRSTNETRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEAAARAYDQAAYAFRGR 109
           G     + +YRG+RRRPWGK+AAEIRD  ++G R+WLGTFDTAE AARAYD+AAY+ RG+
Sbjct: 11  GGGGAEQGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGK 70

Query: 110 LAILNFPNEIQTGNPNSAAAAASSSSATAISFSGGNGRRRSGEVIEFEYLDNEVLEGLLE 169
            AILNFP+E   G  +S+ AA SSSS              S +V EFEYLD+ VL+ LLE
Sbjct: 71  AAILNFPHEYNMGTGSSSTAANSSSS--------------SQQVFEFEYLDDSVLDELLE 119

Query: 170 SGD 173
            G+
Sbjct: 131 YGE 119

[Close]

BLAST of Sed0006149.1 vs. TAIR 10
Match: AT5G47220.1 (ethylene responsive element binding factor 2 )

HSP 1 Score: 112.5 bits (280), Expect = 3.6e-25
Identity = 64/123 (52.03%), Postives = 86/123 (69.92%), Query Frame = 0


Query: 59  YRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEAAARAYDQAAYAFRGRLAILNFPNE 118
           YRG+R+RPWGKFAAEIRDP++NGAR+WLGTF+TAE AA AYD AA+  RG  A+LNFP  
Sbjct: 117 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPLR 176

Query: 119 IQTGNPN--------SAAAAASSSSATAISFSGGNGRRRSGEVIEFEYLDNEVLEGLLES 174
           + +G P+        S+++++SSSS+T+ S +G   RRR       E L +EV++   E 
Sbjct: 177 VNSGEPDPVRITSKRSSSSSSSSSSSTSSSENGKLKRRRKA-----ENLTSEVVQVKCEV 234

The following BLAST results are available for this feature:

BLAST of Sed0006149.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451255.1	7.6e-49	60.47	PREDICTED: ethylene-responsive transcription factor ERF098-like [Cucumis melo]	[more]
XP_038900166.1	2.4e-47	78.72	ethylene-responsive transcription factor ERF098-like [Benincasa hispida]	[more]
KAA0059645.1	4.1e-47	77.30	ethylene-responsive transcription factor ERF098-like protein [Cucumis melo var. ...	[more]
XP_011659259.1	1.2e-46	76.60	ethylene-responsive transcription factor ERF098 [Cucumis sativus]	[more]
XP_022953322.1	1.6e-46	80.74	ethylene-responsive transcription factor ERF098-like [Cucurbita moschata]	[more]

BLAST of Sed0006149.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTC5	5.7e-31	62.71	Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LTC6	2.1e-30	55.38	Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LSX0	2.4e-29	58.62	Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana OX=3702 ...	[more]
P93822	2.0e-28	55.28	Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
O80338	5.1e-24	52.03	Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]

BLAST of Sed0006149.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BR43	3.7e-49	60.47	ethylene-responsive transcription factor ERF098-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A5A7V1C7	2.0e-47	77.30	Ethylene-responsive transcription factor ERF098-like protein OS=Cucumis melo var...	[more]
A0A0A0KAA6	5.8e-47	76.60	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G375830 PE=...	[more]
A0A6J1GMX4	7.6e-47	80.74	ethylene-responsive transcription factor ERF098-like OS=Cucurbita moschata OX=36...	[more]
A0A5D3C881	3.8e-46	76.98	Ethylene-responsive transcription factor ERF098-like protein OS=Cucumis melo var...	[more]

BLAST of Sed0006149.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23230.1	4.0e-32	62.71	Integrase-type DNA-binding superfamily protein	[more]
AT3G23220.1	1.5e-31	55.38	Integrase-type DNA-binding superfamily protein	[more]
AT5G43410.1	1.7e-30	58.62	Integrase-type DNA-binding superfamily protein	[more]
AT1G04370.1	1.4e-29	55.28	Ethylene-responsive element binding factor 14	[more]
AT5G47220.1	3.6e-25	52.03	ethylene responsive element binding factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 82..98 score: 70.48 coord: 59..70 score: 66.52
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 58..122 e-value: 2.1E-35 score: 133.6
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 57..108 e-value: 3.4E-14 score: 52.8
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 58..116 score: 25.409121
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 57..117 e-value: 4.29676E-21 score: 80.0083
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 57..119 e-value: 9.6E-28 score: 98.1
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 55..172
None	No IPR available	PANTHER	PTHR31190:SF266	BNAA01G23960D PROTEIN	coord: 55..172
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 58..118

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0006149	Sed0006149	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0006149.1-five_prime_utr	Sed0006149.1-five_prime_utr-LG09:34210101..34210234	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0006149.1-exon	Sed0006149.1-exon-LG09:34210101..34211031	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0006149.1-cds	Sed0006149.1-cds-LG09:34210235..34210777	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0006149.1-three_prime_utr	Sed0006149.1-three_prime_utr-LG09:34210778..34211031	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0006149.1	Sed0006149.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity