Sed0005255.1 (mRNA) Chayote v1

Overview


Name	Sed0005255.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	homeobox protein knotted-1-like 1
Location	LG11: 3964584 .. 3969329 (-)
Sequence length	1051
RNA-Seq Expression	Sed0005255.1
Synteny	Sed0005255.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTTTAGAAACCAAACTTGAAGCTTGTAGAAAGCAAAAGGGTATGTTAGATAAAAAGAGCCTATAAACACTCCTTGTATAGTTCAGAATCAGTATCATGACAGAAAAAGAATCCCCCCTTGAATTTAGCTGCCTCATGACAATATTTTTTTATTGCATTATCTTTTTCTTTTCTTTTCTTTTTCATTTCTTCTTATAACCCATACTTCCCTCTCACTTTGGCAGCCATAGCTCTTAAAAGAGTGTGAGAAATAGATAAAAAGAGAAAGAAAGTTCAATCTTCCAAGCTTTTGAAGTTTTGAGGAAATGGAAGAGTTTTATAACAGCTCTGTTATATCCACATACACTAATGGTGGATTCCATGGAGCTCACATGGTGGGTGGTGAAATGCTTCAGCTTGAAGCTGAGTCCACAACTGGAGTTAACATGTCTGACATGATCAAGGCTCAAATTGCCAACCATCCCCTTTATCCCAAACTGGTTTCTGCTTACATTGAATGCCAAAAAGTTTGTAAATTTATTACCTCTCTTAATGATTCATCATTTTTTTTAGCTGTTTTTAGCAGAGTTTGAGGTTGGTTGTCTTGTAGACTTGTAATGTTTTGTGCTTGATTCAAGGTTGGAGCTTCACCACAAATGGCTTCTCTGCTTGAGCAAATTGGTCTTGAAAATCACAATCCTAGGTCTTGTATTGAGCTGGGAGCTGATCCTCAACTGGACAACTTTATGGTACTTTTGTTTTGAACTTCCTGTTGTGATTTTCTGGTTTTATAGAATCACTGTTGACAAGAAAATCTTAATGTGAATTATATTTTGTTTTACTTTGGCGAGTTCATCCTGATCCCTACTAGATAAACACTGGTATTGCACTTTGATCACAGTTTTGTTGCAAATAACATAACATTTTATAAATAATAGGAGCAACAATCAAGAAATAAAGAAAAAATGCAAGGCATGCAACAGGATGATTTACGTGGTTCGCTAAAGTCGAGTTAGCTAAGTCCTCAGACAGAGCAGAAAACTGTTATATTTAAGAGATAAGAACACAACGTTTGGTTGAACGAGATTTCAACATTACTGATTAATACAAATGCTGGTGGAAACTGGCCAAGGGCTCCATAGCGAACAGCTTAATTAGCAAAGATTAATGGCGCGAAAACCGTAAGGGCTTATTTGGCTAGGGCGGGAGAAGGGAAGGGAAAGAAGGAAAAGGAAGGGAAGTGAGAGTAAATTATTGTTTGGTGGAAAGGGAAAGAAAATGATGTGATTGTAAATTGATGTTTGGTGGGTTGGGAAGGGATGAGATGATTTTTTTTAACTAATACATATCTAATATATTAATATAAAATTCATAAAATATCTTTTTTAAAATTATTTCTTAAATAAAAATTAAAAGTGTAATACATTTTGTCAATCAAAATTACTAAATTAATGAAATAAAAAAATTCCAATAATAAAAAATGATAATTATTTAAAAATAATAAATCAAAATAAATAGATAAATATAATTTTTTATAATGAAATTAAGTTTAGAAATTCAAATCAAGATAGATGTAATAAAAAGATAACTATTTTAATTATTTTGAGTAATTATTTTAGGATTATTTAAATATATATTTCTATTTATTTTATAAAATGTATGAATTTAAAAAAAATTGATAAATAATAAAATTAATATATATTTGTATATAAAATTTTTTAAATGCATACATTGTCCATAAAAAGTCAAATATATAAACAATTACAAATATTGTTTAAAGAACTTGATATATCTATAAAATAATAATAATAATAATTGTTGCATTTTAAAATAAAAAATATATATAAATAGCATATAGTATAAATTTAATCAATTAAGTGGTTCTAAAAAAAAAAATCCATTAACTTAAATGAATGAATTAGTAAAAGTTAACAAGCTTATTATTTTTATTTAAAATAAAGTTTATGATCAAATCAAATGCATCAAATTATAATTATAAAAACATCAAACTACAAATATGTTTTAAAAAATAGGATGTATTTAGAAGAAAAAAATAGATAAATATTGTATTTTGAAAAAAATTGATACTAATAAATAAATAAATAAATATATATAAAATAAGTTAATATACATAAAAAAATTAAGGTGGTAGAGTTGGTTAATGATATCTACTTAATTTAAGATAATTTTAAAAGATGGAAAATTCAAATCTTATATAAATTTTTATTTTAGAATAATACTTTAAATTACGAAAATATATAACTAATAAAAGGATTTTAATTAAAATTAAATAAAATGGATGAAAACGTAAAACAAAAGTGGAAAGTTTGTTAAAGTAATAACACAAACGAAAAGTAAAGAAAAAGAAAAGAAGCAGGCAAGCGAAAAAAAAGAAAGAAAGAAAAAAAAAAAAAGGTGTGAACATCACGTGTCGGGTTGGGCTGGGTTACGTGCTGGGTTAACCCGGCGGCCCAAACGCCGGGAAGAGCCCTCCCCTTCCCTTCCCGGGCTGATATGGGCGGGCCAAACGTGCCCTAAAGGATTAAAATCATTGCACTCTCAGTTGGCTATGGTAATGATCTAATATAGTACAGTATTCATGTTCATTTCATTTTCTTTTAGGTATTGATGATTATGAAATATTTTCCCTTTTCAAATGGTGGATGAAAACTAAAGTTGTTTAAGCTTGGAAGAATAAAAGTGATATAGATAAGTAAATATTTTATCAATAGAGTATTAACAAAGAAAGAGAAGAAAACTTGGTGAAGTTTCTGCTGTTTTTGTTTGAAATTTGAGATATTTCTTGATACCCCCACTAAGGGAATACATTCTTTAGCTTCTAGTACTTTACTGAACTTATATGCCATAAAATGGGAACTTTTTTCTGAAGGAGTCATACTGTGAAGTTCTTCATCAATATAAAAATGAGCTATCCAAGCCATTTGATGAAGCAGCAGTGTTCTTGACCAACATTAAATTGGAGCTAAGCAACCTGTGTAAAGGATCATTTACTGCAACATTCGATTCTCGCTCCGTTATGAATGGTACTTTCGTCTTCTCTTCATCTGTATTGCTTCACTTCCTTCAAAGATTAGCTTTCTTTCTCCAAGTTCTTCCTAATCCTGATGGCTATTTTCTTCAAGAACTTCCATTGATTTTACCTTCAGTTTCTGCAACATTGGAGGTGTAATGAGTAGTTAACATTGGAGTTATCATTATATAACCATGTGTGGATCTTGTGTTCTTTGAAAAATAGTTAATTCATTTTTGGAGATTTTAGGACGTGGAAACTCATAAACACTTAGATATGGATAAGGAAAAGGAATGATGAAATGTGAGTTGTGGAGTGATATCAAATCTTTTTGCACAAGAAACCCTCCAAGTAGCAACTAAGGGGTATTTAAGGGAAAGAGAAGGGAACGATTATCAAGACGAATGAGAACACAAGATAGGGGGAACGATTAACTAGGATCATTATTTATGTTTGGGTTAAGAAAATTGTTTTGATGGAATAATTATCTGCGTTTGGGTGATAGGAAATGATAATGGAGAAACCATTACTAGTGTTTAAGGTGCAAGGAATGATTCTGGAGGAACCATTACTTGTGTTAAGGTGCAAGAAATGAATCGGGGAACTATTACTTATGATTGGAGTGCAGAGAATGATTATAAGGAACTAAATGTTGATTATGGGAGAGGTGAATAGTGATTATGGAAGGAATGAATAGTTGTTATGGAGTGAATGATTGTCGGTGACCCGAAATTTAGTAAAGGAATTATTCACCATCCTCCAGTTTGATCCCCGGCCCCAAACCCTTCCAAGGGTGTTTGCAATGTCTTTGCGAGTGTTTAGGCAATTTAAGCACTCACAAAGTCATTCCAAGTGAAATGTATGCTATGAGTAACAAGCATTTCTAGTTTGTTAGAATTCAAAATGTCGATAATTCGAATTGAACTAGTATTGATAATTCTTTCAAGTAAATATCAAGAACATCTCAAAGTAGAAGAAAGCAATAGCAGATACTTATTTTTCCATTTGTTCCTCAAACTTTTTTTTTTTTTTTCAAACCTTGTTCCTCAAGCTTTGACAGTCATGTATGCACATTTTGATGCAAAAAAGTAGACTATGAATGTGAAAACTGCTCCTAACTTCCCTCTAATTCTTCCATGAACTCTTCCGTTCCCCGCCTCCTCTCTTTCGTTCCGTATGTTCATAGATGAAGTAGCTGGGACCCTGGAGGAAGAACCGAGCAGCTATGGCGAGATGGAAATGCCGGGAAATCGCGAGTCATTGTGCACGAGGCAAACAAATCAAGACCTCAAAGAAATGTTACTTAAGAAATACAGTGGCTATGTCAGCAATTTGAAGAAGGAATTCTTGAAAAAAAGGAAGAAGGAGAAGCTGCCTAAGGATGCAAGGATGACTCTATTTGAATGGTGGAACACTCATTATAAATGGCCTTATCCCACAGTAATTTCAATCCCCTTCTCAGTTCTTTATATTGCATAAAACAAATCAATTTGTGATTGACTTTTTTTTTTCCATTGGTTTGACAGGAAGAGGAAAAATCAAAACTTTCTGATATCACTGGTTTGGAACAAAAGCAGATCAATAACTGGTTCATTAACCAGAGAAAGCGGCATTGGAAGCCGCCCGAAGATATTCGGTTTGCCCTCATGGCCGGGGCAGGAGAAGAGGAATGTATCAAATGATCAAATTTTTATGACAATAGAGAAACAAAAATGTAATTTGATTGATATAGTT

mRNA sequence

GTTTTTTAGAAACCAAACTTGAAGCTTGTAGAAAGCAAAAGGCCATAGCTCTTAAAAGAGTGTGAGAAATAGATAAAAAGAGAAAGAAAGTTCAATCTTCCAAGCTTTTGAAGTTTTGAGGAAATGGAAGAGTTTTATAACAGCTCTGTTATATCCACATACACTAATGGTGGATTCCATGGAGCTCACATGGTGGGTGGTGAAATGCTTCAGCTTGAAGCTGAGTCCACAACTGGAGTTAACATGTCTGACATGATCAAGGCTCAAATTGCCAACCATCCCCTTTATCCCAAACTGGTTTCTGCTTACATTGAATGCCAAAAAGTTGGAGCTTCACCACAAATGGCTTCTCTGCTTGAGCAAATTGGTCTTGAAAATCACAATCCTAGGTCTTGTATTGAGCTGGGAGCTGATCCTCAACTGGACAACTTTATGGAGTCATACTGTGAAGTTCTTCATCAATATAAAAATGAGCTATCCAAGCCATTTGATGAAGCAGCAGTGTTCTTGACCAACATTAAATTGGAGCTAAGCAACCTGTGTAAAGGATCATTTACTGCAACATTCGATTCTCGCTCCGTTATGAATGATGAAGTAGCTGGGACCCTGGAGGAAGAACCGAGCAGCTATGGCGAGATGGAAATGCCGGGAAATCGCGAGTCATTGTGCACGAGGCAAACAAATCAAGACCTCAAAGAAATGTTACTTAAGAAATACAGTGGCTATGTCAGCAATTTGAAGAAGGAATTCTTGAAAAAAAGGAAGAAGGAGAAGCTGCCTAAGGATGCAAGGATGACTCTATTTGAATGGTGGAACACTCATTATAAATGGCCTTATCCCACAGAAGAGGAAAAATCAAAACTTTCTGATATCACTGGTTTGGAACAAAAGCAGATCAATAACTGGTTCATTAACCAGAGAAAGCGGCATTGGAAGCCGCCCGAAGATATTCGGTTTGCCCTCATGGCCGGGGCAGGAGAAGAGGAATGTATCAAATGATCAAATTTTTATGACAATAGAGAAACAAAAATGTAATTTGATTGATATAGTT

Coding sequence (CDS)

ATGGAAGAGTTTTATAACAGCTCTGTTATATCCACATACACTAATGGTGGATTCCATGGAGCTCACATGGTGGGTGGTGAAATGCTTCAGCTTGAAGCTGAGTCCACAACTGGAGTTAACATGTCTGACATGATCAAGGCTCAAATTGCCAACCATCCCCTTTATCCCAAACTGGTTTCTGCTTACATTGAATGCCAAAAAGTTGGAGCTTCACCACAAATGGCTTCTCTGCTTGAGCAAATTGGTCTTGAAAATCACAATCCTAGGTCTTGTATTGAGCTGGGAGCTGATCCTCAACTGGACAACTTTATGGAGTCATACTGTGAAGTTCTTCATCAATATAAAAATGAGCTATCCAAGCCATTTGATGAAGCAGCAGTGTTCTTGACCAACATTAAATTGGAGCTAAGCAACCTGTGTAAAGGATCATTTACTGCAACATTCGATTCTCGCTCCGTTATGAATGATGAAGTAGCTGGGACCCTGGAGGAAGAACCGAGCAGCTATGGCGAGATGGAAATGCCGGGAAATCGCGAGTCATTGTGCACGAGGCAAACAAATCAAGACCTCAAAGAAATGTTACTTAAGAAATACAGTGGCTATGTCAGCAATTTGAAGAAGGAATTCTTGAAAAAAAGGAAGAAGGAGAAGCTGCCTAAGGATGCAAGGATGACTCTATTTGAATGGTGGAACACTCATTATAAATGGCCTTATCCCACAGAAGAGGAAAAATCAAAACTTTCTGATATCACTGGTTTGGAACAAAAGCAGATCAATAACTGGTTCATTAACCAGAGAAAGCGGCATTGGAAGCCGCCCGAAGATATTCGGTTTGCCCTCATGGCCGGGGCAGGAGAAGAGGAATGTATCAAATGA

Protein sequence

MEEFYNSSVISTYTNGGFHGAHMVGGEMLQLEAESTTGVNMSDMIKAQIANHPLYPKLVSAYIECQKVGASPQMASLLEQIGLENHNPRSCIELGADPQLDNFMESYCEVLHQYKNELSKPFDEAAVFLTNIKLELSNLCKGSFTATFDSRSVMNDEVAGTLEEEPSSYGEMEMPGNRESLCTRQTNQDLKEMLLKKYSGYVSNLKKEFLKKRKKEKLPKDARMTLFEWWNTHYKWPYPTEEEKSKLSDITGLEQKQINNWFINQRKRHWKPPEDIRFALMAGAGEEECIK

Homology

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BLAST of Sed0005255.1 vs. NCBI nr
Match: XP_022156368.1 (homeobox protein knotted-1-like 1 isoform X1 [Momordica charantia])

HSP 1 Score: 491.9 bits (1265), Expect = 3.8e-135
Identity = 243/296 (82.09%), Postives = 262/296 (88.51%), Query Frame = 0


Query: 1   MEEFY--NSSVISTYTNG-GFHGAHMVGGEMLQLEAESTTGVNMSDMIKAQIANHPLYPK 60
           MEEFY  N+ +IS++ NG    GA MV  +MLQLE+E+TTG+NMSDMIK QI NHPLYPK
Sbjct: 1   MEEFYRLNNPLISSFPNGEAIDGAMMVDDDMLQLESEATTGLNMSDMIKTQIVNHPLYPK 60

Query: 61  LVSAYIECQKVGASPQMASLLEQIGLENHNPRSCIELGADPQLDNFMESYCEVLHQYKNE 120
           LVSAYIECQKVGA PQ+ASLLE+IG ENH PRSCIELGADPQLDNFMESYCEVLHQYKNE
Sbjct: 61  LVSAYIECQKVGAPPQVASLLEEIGRENHPPRSCIELGADPQLDNFMESYCEVLHQYKNE 120

Query: 121 LSKPFDEAAVFLTNIKLELSNLCKGSFTATFDSRSVMNDEVAGTLEEEPSSYGEMEMPGN 180
           LSKPFDEA +FLTNI+LELSNLCKGSF+   DS S MNDEVA   EEEPSSYGE+EMPGN
Sbjct: 121 LSKPFDEATMFLTNIELELSNLCKGSFSTPSDSHSAMNDEVAEISEEEPSSYGEVEMPGN 180

Query: 181 RESLCTRQTNQDLKEMLLKKYSGYVSNLKKEFLKKRKKEKLPKDARMTLFEWWNTHYKWP 240
            ES CTRQTNQDLKEMLLKKYSGY+S+LKKEFLKKRKKEKLPKDARM LF+WWNTHYKWP
Sbjct: 181 PESFCTRQTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALFDWWNTHYKWP 240

Query: 241 YPTEEEKSKLSDITGLEQKQINNWFINQRKRHWKPPEDIRFALM--AGAGEEECIK 292
           YPTEEEKSKLSDITGL+QKQINNWFINQRKRHWKPPED+RFALM   G G  ECIK
Sbjct: 241 YPTEEEKSKLSDITGLDQKQINNWFINQRKRHWKPPEDMRFALMDGVGTGAGECIK 296

[Close]

BLAST of Sed0005255.1 vs. NCBI nr
Match: XP_038889741.1 (homeobox protein knotted-1-like 1 [Benincasa hispida])

HSP 1 Score: 485.3 bits (1248), Expect = 3.6e-133
Identity = 240/306 (78.43%), Postives = 261/306 (85.29%), Query Frame = 0


Query: 1   MEEFY--NSSVISTYTN-------------GGFHGAHMVGGEMLQLEAESTTGVNMSDMI 60
           MEEFY  N+SVI++Y+N             GG H A MV  +ML LEAE+TTG NMS+MI
Sbjct: 1   MEEFYRLNNSVIASYSNSVVGGEAIASTSCGGIHEALMVDDDMLHLEAEATTGSNMSNMI 60

Query: 61  KAQIANHPLYPKLVSAYIECQKVGASPQMASLLEQIGLENHNPRSCIELGADPQLDNFME 120
           K QI NHPLYPKLVSAY+ECQKVGA PQ+ASLLE+IG ENH PRS IELGADPQLDNFME
Sbjct: 61  KTQIVNHPLYPKLVSAYVECQKVGAPPQVASLLEEIGRENHPPRSSIELGADPQLDNFME 120

Query: 121 SYCEVLHQYKNELSKPFDEAAVFLTNIKLELSNLCKGSFTATFDSRSVMNDEVAGTLEEE 180
           SYCEVLHQYKNELSKPFDEA +FLTNI+LELSNLCKGSFT T DS S MNDEVAGT EEE
Sbjct: 121 SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTVTSDSHSTMNDEVAGTPEEE 180

Query: 181 PSSYGEMEMPGNRESLCTRQTNQDLKEMLLKKYSGYVSNLKKEFLKKRKKEKLPKDARMT 240
           PSSYG+++MPGN ES C R+TNQDLKEMLLKKYSGY+S+LKKEFLKKRKKEKLPKDARM 
Sbjct: 181 PSSYGQVKMPGNHESFCMRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240

Query: 241 LFEWWNTHYKWPYPTEEEKSKLSDITGLEQKQINNWFINQRKRHWKPPEDIRFALMAGAG 292
           L +WWNTHYKWPYPTEEEKSKLS ITGL+QKQINNWFINQRKRHWKPPED+RF LM G G
Sbjct: 241 LLDWWNTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG 300

[Close]

BLAST of Sed0005255.1 vs. NCBI nr
Match: XP_023537573.1 (homeobox protein knotted-1-like 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 476.5 bits (1225), Expect = 1.7e-130
Identity = 238/308 (77.27%), Postives = 260/308 (84.42%), Query Frame = 0


Query: 1   MEEFY--NSSVISTYTN-------------GGFHGAHMVGGEMLQLEAESTTGVNMSDMI 60
           MEEFY  NSSVIS+YTN             GG HGA M+  EM+QLEAE+TTG+NMS++I
Sbjct: 1   MEEFYRLNSSVISSYTNGVVASEAIASTSCGGVHGAQMMNNEMIQLEAETTTGLNMSEII 60

Query: 61  KAQIANHPLYPKLVSAYIECQKVGASPQMASLLEQIGLENHNPRSCIELGADPQLDNFME 120
           K QI NHPLY KLVSAYIECQKVGA PQ+A LLE+IG ENH PRSCIELGADPQLDNFME
Sbjct: 61  KTQIVNHPLYCKLVSAYIECQKVGAPPQVACLLEEIGRENHPPRSCIELGADPQLDNFME 120

Query: 121 SYCEVLHQYKNELSKPFDEAAVFLTNIKLELSNLCKGSFTATFDSRSVMNDEVAGTLEEE 180
           SYCEVLHQYKNEL+KPF+EA +FLTNI+LELSNLCKGSFTAT DSR   NDEVA T E+E
Sbjct: 121 SYCEVLHQYKNELTKPFNEATMFLTNIELELSNLCKGSFTATSDSRPATNDEVAETPEDE 180

Query: 181 PSSYGEMEMPGNRESLCTRQTNQDLKEMLLKKYSGYVSNLKKEFLKKRKKEKLPKDARMT 240
           P SY E+EMPGN E   TRQTNQDLKEMLLKKYSGY+S+LKK+FLKKRKKEKLPKDARM 
Sbjct: 181 PGSYREVEMPGNHEPFGTRQTNQDLKEMLLKKYSGYLSSLKKDFLKKRKKEKLPKDARMA 240

Query: 241 LFEWWNTHYKWPYPTEEEKSKLSDITGLEQKQINNWFINQRKRHWKPPEDIRFALM--AG 292
           LF+WWNTHYKWPYPTEEEKSKLS ITGL+QKQINNWFINQRKRHW PPE++RFALM   G
Sbjct: 241 LFDWWNTHYKWPYPTEEEKSKLSGITGLDQKQINNWFINQRKRHWNPPEEMRFALMDSVG 300

[Close]

BLAST of Sed0005255.1 vs. NCBI nr
Match: KAG6599184.1 (Homeobox protein knotted-1-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 474.6 bits (1220), Expect = 6.3e-130
Identity = 240/310 (77.42%), Postives = 261/310 (84.19%), Query Frame = 0


Query: 1   MEEFY--NSSVISTYTN-------------GGFHGAHMVGGEMLQLEAESTTGVNMSDMI 60
           M+EFY  N+ V+S+Y+N             G  H A MV  E+L LEAE TTG+NMSDMI
Sbjct: 1   MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMI 60

Query: 61  KAQIANHPLYPKLVSAYIECQKVGASPQMASLLEQIGLENHNPRSCIELGADPQLDNFME 120
           K QI NHPLYPKLVSAYIECQKVGA PQ+ASLLE+IG ENH  RSCIELGADPQLDNFME
Sbjct: 61  KTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSCIELGADPQLDNFME 120

Query: 121 SYCEVLHQYKNELSKPFDEAAVFLTNIKLELSNLCKGSFTATFDSRSVMNDEVAGTLEEE 180
           SYCEVLHQYKNELSKPFDEAA+FLTNI+LELSNLCKGSFTAT +SRS +NDEVAGT EEE
Sbjct: 121 SYCEVLHQYKNELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAINDEVAGTPEEE 180

Query: 181 PSSYGEMEMPGNRESLCTRQTNQDLKEMLLKKYSGYVSNLKKEFLKKRKKEKLPKDARMT 240
           PSSYGE+E  GN E   TR+TNQDLKEMLLKKYSGY+S+LKKEFLKKRKKEKLPKDARM 
Sbjct: 181 PSSYGEVETTGNHEPFSTRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240

Query: 241 LFEWWNTHYKWPYPTEEEKSKLSDITGLEQKQINNWFINQRKRHWKPPEDIRFALMAGA- 292
           L EWW+THYKWPYPTEEEKSKLS ITGL+QKQINNWFINQRKRHWKPPED+RF LM GA 
Sbjct: 241 LLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAG 300

[Close]

BLAST of Sed0005255.1 vs. NCBI nr
Match: XP_008453416.1 (PREDICTED: homeobox protein knotted-1-like 1 isoform X1 [Cucumis melo] >KAA0048072.1 homeobox protein knotted-1-like 1 isoform X1 [Cucumis melo var. makuwa] >TYJ96464.1 homeobox protein knotted-1-like 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 474.6 bits (1220), Expect = 6.3e-130
Identity = 237/306 (77.45%), Postives = 256/306 (83.66%), Query Frame = 0


Query: 1   MEEFY--NSSVISTYTN-------------GGFHGAHMVGGEMLQLEAESTTGVNMSDMI 60
           MEEFY  N+ VI++Y+N             G  H A MV  +MLQLEAE TTG+NMSDMI
Sbjct: 1   MEEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMI 60

Query: 61  KAQIANHPLYPKLVSAYIECQKVGASPQMASLLEQIGLENHNPRSCIELGADPQLDNFME 120
           K QI NHPLYPKLVSAYIECQKVGA PQ+ASLLE+IG ENH  RS IELGADPQLDNFME
Sbjct: 61  KTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIELGADPQLDNFME 120

Query: 121 SYCEVLHQYKNELSKPFDEAAVFLTNIKLELSNLCKGSFTATFDSRSVMNDEVAGTLEEE 180
           SYCEVLHQYKNELSKPFDEA +FLTNI+LELSNLCKGSFT   DSRS MNDEV+GT EEE
Sbjct: 121 SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMLDSRSAMNDEVSGTPEEE 180

Query: 181 PSSYGEMEMPGNRESLCTRQTNQDLKEMLLKKYSGYVSNLKKEFLKKRKKEKLPKDARMT 240
           PSSY E+EMP N E  CTR+TNQDLKEMLLKKYSGY+S+LKKEFLKKRKKEKLPKDARM 
Sbjct: 181 PSSYEEVEMPRNHEPFCTRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240

Query: 241 LFEWWNTHYKWPYPTEEEKSKLSDITGLEQKQINNWFINQRKRHWKPPEDIRFALMAGAG 292
           L +WWNTHYKWPYPTEEEKSKLS  TGL+QKQINNWFINQRKRHWKPPED+RF LM G G
Sbjct: 241 LLDWWNTHYKWPYPTEEEKSKLSITTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG 300

[Close]

BLAST of Sed0005255.1 vs. ExPASy Swiss-Prot
Match: A2Y007 (Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica OX=39946 GN=OSH71 PE=2 SV=2)

HSP 1 Score: 285.8 bits (730), Expect = 5.5e-76
Identity = 142/255 (55.69%), Postives = 186/255 (72.94%), Query Frame = 0


Query: 33  AESTTGVNMSDMIKAQIANHPLYPKLVSAYIECQKVGASPQMASLLEQIGLENH----NP 92
           A +    ++++++KAQIA HP YP L+SAYIEC+KVGA P++ +LLE+IG E        
Sbjct: 43  ATTAAAADLTELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGREGRGGGGGA 102

Query: 93  RSCIELGADPQLDNFMESYCEVLHQYKNELSKPFDEAAVFLTNIKLELSNLCKGSFTATF 152
            +  E+G DP+LD FME+YC VL +YK EL++PFDEAA FLT I  +L++LC G+   T 
Sbjct: 103 TAGGEIGLDPELDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLCGGAPPPTD 162

Query: 153 DSRSVMNDEVAGTLEEEPSSYGEMEMPGNRESLCTRQTNQDLKEMLLKKYSGYVSNLKKE 212
           +S     DE+ G+ E+EP S G+ +     +   +R  + +LKEMLLKKYSG +S L+ E
Sbjct: 163 NS-----DEMVGSSEDEPCS-GDADAADFGQEHSSRLADHELKEMLLKKYSGCLSRLRSE 222

Query: 213 FLKKRKKEKLPKDARMTLFEWWNTHYKWPYPTEEEKSKLSDITGLEQKQINNWFINQRKR 272
           FLKKRKK KLPKDAR  L +WWNTHY+WPYPTEE+K +L+ +TGL+ KQINNWFINQRKR
Sbjct: 223 FLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKR 282

Query: 273 HWKPPEDIRFALMAG 284
           HWKP ED+RFALM G
Sbjct: 283 HWKPSEDMRFALMEG 291

[Close]

BLAST of Sed0005255.1 vs. ExPASy Swiss-Prot
Match: Q7GDL5 (Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica OX=39947 GN=OSH71 PE=2 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 5.5e-76
Identity = 142/255 (55.69%), Postives = 186/255 (72.94%), Query Frame = 0


Query: 33  AESTTGVNMSDMIKAQIANHPLYPKLVSAYIECQKVGASPQMASLLEQIGLENH----NP 92
           A +    ++++++KAQIA HP YP L+SAYIEC+KVGA P++ +LLE+IG E        
Sbjct: 43  ATTAAAADLTELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGREGRGGGGGA 102

Query: 93  RSCIELGADPQLDNFMESYCEVLHQYKNELSKPFDEAAVFLTNIKLELSNLCKGSFTATF 152
            +  E+G DP+LD FME+YC VL +YK EL++PFDEAA FLT I  +L++LC G+   T 
Sbjct: 103 TAGGEIGLDPELDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLCGGAPPPTD 162

Query: 153 DSRSVMNDEVAGTLEEEPSSYGEMEMPGNRESLCTRQTNQDLKEMLLKKYSGYVSNLKKE 212
           +S     DE+ G+ E+EP S G+ +     +   +R  + +LKEMLLKKYSG +S L+ E
Sbjct: 163 NS-----DEMVGSSEDEPCS-GDADAADFGQEHSSRLADHELKEMLLKKYSGCLSRLRSE 222

Query: 213 FLKKRKKEKLPKDARMTLFEWWNTHYKWPYPTEEEKSKLSDITGLEQKQINNWFINQRKR 272
           FLKKRKK KLPKDAR  L +WWNTHY+WPYPTEE+K +L+ +TGL+ KQINNWFINQRKR
Sbjct: 223 FLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKR 282

Query: 273 HWKPPEDIRFALMAG 284
           HWKP ED+RFALM G
Sbjct: 283 HWKPSEDMRFALMEG 291

[Close]

BLAST of Sed0005255.1 vs. ExPASy Swiss-Prot
Match: Q9FP29 (Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=OSH6 PE=2 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 3.5e-75
Identity = 141/247 (57.09%), Postives = 186/247 (75.30%), Query Frame = 0


Query: 40  NMSDMIKAQIANHPLYPKLVSAYIECQKVGASPQMASLLEQIGLENH---NPRSCIELGA 99
           ++++++KAQIA HP YP L+SAYIEC+KVGA P++ASLL++IG E           ++G 
Sbjct: 38  DLTELMKAQIAGHPRYPTLLSAYIECRKVGAPPEVASLLKEIGRERRAGGGGGGAGQIGV 97

Query: 100 DPQLDNFMESYCEVLHQYKNELSKPFDEAAVFLTNIKLELSNLCKGSFTATFDSRSVMND 159
           DP+LD FME+YC VL +YK ELS+PFDEAA FL++I+ +LSNLC G+ T+   + +  +D
Sbjct: 98  DPELDEFMEAYCRVLVRYKEELSRPFDEAASFLSSIQTQLSNLCSGA-TSPPATTATHSD 157

Query: 160 EVAGTLEEEPSSYGEMEMPGNRESLCTRQTNQDLKEMLLKKYSGYVSNLKKEFLKKRKKE 219
           E+ G+ +E+  S GE +M    +   +R  + +LKEMLLKKYSG +S L+ EFLKKRKK 
Sbjct: 158 EMVGSSDEDQCS-GETDMLDIGQEQSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKG 217

Query: 220 KLPKDARMTLFEWWNTHYKWPYPTEEEKSKLSDITGLEQKQINNWFINQRKRHWKPPEDI 279
           KLPKDAR  L EWWNTHY+WPYPTEE+K +L+  TGL+ KQINNWFINQRKRHWKP + +
Sbjct: 218 KLPKDARSALLEWWNTHYRWPYPTEEDKLRLAARTGLDPKQINNWFINQRKRHWKPSDGM 277

Query: 280 RFALMAG 284
           RFALM G
Sbjct: 278 RFALMEG 282

[Close]

BLAST of Sed0005255.1 vs. ExPASy Swiss-Prot
Match: Q84JS6 (Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana OX=3702 GN=KNAT6 PE=1 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 4.3e-65
Identity = 128/244 (52.46%), Postives = 171/244 (70.08%), Query Frame = 0


Query: 44  MIKAQIANHPLYPKLVSAYIECQKVGASPQMASLLEQIGLENH------NPRSCIELGAD 103
           +IKA+IA HP YP+L+ AYI+CQKVGA P++A LLE+I  E+        P SC   GAD
Sbjct: 84  VIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLEEIQRESDVYKQEVVPSSC--FGAD 143

Query: 104 PQLDNFMESYCEVLHQYKNELSKPFDEAAVFLTNIKLELSNLCKGSFTATFDSRSVMNDE 163
           P+LD FME+YC++L +YK++L++PFDEA  FL  I+++L NLC G  +A    R V  D 
Sbjct: 144 PELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCTGVESA----RGVSEDG 203

Query: 164 VAGTLEEEPSSYGEMEMPGNRESLCTRQTNQDLKEMLLKKYSGYVSNLKKEFLKKRKKEK 223
           V  +  +E  S G+ E+  +    C    ++DLK+ LL+K+   +S LK EF KK+KK K
Sbjct: 204 VISS--DEELSGGDHEVAEDGRQRC---EDRDLKDRLLRKFGSRISTLKLEFSKKKKKGK 263

Query: 224 LPKDARMTLFEWWNTHYKWPYPTEEEKSKLSDITGLEQKQINNWFINQRKRHWKPPEDIR 282
           LP++AR  L +WWN HYKWPYPTE +K  L+D TGL+QKQINNWFINQRKRHWKP E++ 
Sbjct: 264 LPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPSENMP 316

[Close]

BLAST of Sed0005255.1 vs. ExPASy Swiss-Prot
Match: P46640 (Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 SV=3)

HSP 1 Score: 248.8 bits (634), Expect = 7.4e-65
Identity = 131/297 (44.11%), Postives = 193/297 (64.98%), Query Frame = 0


Query: 1   MEEFYNSSVISTYTN-----GGFHGAHMVGGEMLQLEAESTTGVNMSDMIKAQIANHPLY 60
           M   Y S + ST  +     G    A  +  E+L    ++    ++S +IK++IA+HPLY
Sbjct: 21  MPSDYQSLICSTTGDNQRLFGSDELATALSSELLPRIRKAEDNFSLS-VIKSKIASHPLY 80

Query: 61  PKLVSAYIECQKVGASPQMASLLEQIGLENH------NPRSCIELGADPQLDNFMESYCE 120
           P+L+  YI+CQKVGA  ++A +LE+I  ENH       P SC   GADP+LD FME+YC+
Sbjct: 81  PRLLQTYIDCQKVGAPMEIACILEEIQRENHVYKRDVAPLSC--FGADPELDEFMETYCD 140

Query: 121 VLHQYKNELSKPFDEAAVFLTNIKLELSNLCKGSFTATFDSRSVMNDEVAGTLEEEPSSY 180
           +L +YK +L++PFDEA  F+  I+++L NLC G  +AT      ++D+ A + +EE    
Sbjct: 141 ILVKYKTDLARPFDEATTFINKIEMQLQNLCTGPASAT-----ALSDDGAVSSDEELRED 200

Query: 181 GEMEMPGNRESLCTRQTNQDLKEMLLKKYSGYVSNLKKEFLKKRKKEKLPKDARMTLFEW 240
            ++    +++    R  ++DLK+ LL+K+  ++S+LK EF KK+KK KLP++AR  L +W
Sbjct: 201 DDIAADDSQQ----RSNDRDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQALLDW 260

Query: 241 WNTHYKWPYPTEEEKSKLSDITGLEQKQINNWFINQRKRHWKPPEDIRFALMAGAGE 287
           WN H KWPYPTE +K  L++ TGL+QKQINNWFINQRKRHWKP E++ F +M  + E
Sbjct: 261 WNVHNKWPYPTEGDKISLAEETGLDQKQINNWFINQRKRHWKPSENMPFDMMDDSNE 305

[Close]

BLAST of Sed0005255.1 vs. ExPASy TrEMBL
Match: A0A6J1DQF7 (homeobox protein knotted-1-like 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023277 PE=3 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 1.9e-135
Identity = 243/296 (82.09%), Postives = 262/296 (88.51%), Query Frame = 0


Query: 1   MEEFY--NSSVISTYTNG-GFHGAHMVGGEMLQLEAESTTGVNMSDMIKAQIANHPLYPK 60
           MEEFY  N+ +IS++ NG    GA MV  +MLQLE+E+TTG+NMSDMIK QI NHPLYPK
Sbjct: 1   MEEFYRLNNPLISSFPNGEAIDGAMMVDDDMLQLESEATTGLNMSDMIKTQIVNHPLYPK 60

Query: 61  LVSAYIECQKVGASPQMASLLEQIGLENHNPRSCIELGADPQLDNFMESYCEVLHQYKNE 120
           LVSAYIECQKVGA PQ+ASLLE+IG ENH PRSCIELGADPQLDNFMESYCEVLHQYKNE
Sbjct: 61  LVSAYIECQKVGAPPQVASLLEEIGRENHPPRSCIELGADPQLDNFMESYCEVLHQYKNE 120

Query: 121 LSKPFDEAAVFLTNIKLELSNLCKGSFTATFDSRSVMNDEVAGTLEEEPSSYGEMEMPGN 180
           LSKPFDEA +FLTNI+LELSNLCKGSF+   DS S MNDEVA   EEEPSSYGE+EMPGN
Sbjct: 121 LSKPFDEATMFLTNIELELSNLCKGSFSTPSDSHSAMNDEVAEISEEEPSSYGEVEMPGN 180

Query: 181 RESLCTRQTNQDLKEMLLKKYSGYVSNLKKEFLKKRKKEKLPKDARMTLFEWWNTHYKWP 240
            ES CTRQTNQDLKEMLLKKYSGY+S+LKKEFLKKRKKEKLPKDARM LF+WWNTHYKWP
Sbjct: 181 PESFCTRQTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALFDWWNTHYKWP 240

Query: 241 YPTEEEKSKLSDITGLEQKQINNWFINQRKRHWKPPEDIRFALM--AGAGEEECIK 292
           YPTEEEKSKLSDITGL+QKQINNWFINQRKRHWKPPED+RFALM   G G  ECIK
Sbjct: 241 YPTEEEKSKLSDITGLDQKQINNWFINQRKRHWKPPEDMRFALMDGVGTGAGECIK 296

[Close]

BLAST of Sed0005255.1 vs. ExPASy TrEMBL
Match: A0A5D3BBX6 (Homeobox protein knotted-1-like 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001080 PE=3 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 3.1e-130
Identity = 237/306 (77.45%), Postives = 256/306 (83.66%), Query Frame = 0


Query: 1   MEEFY--NSSVISTYTN-------------GGFHGAHMVGGEMLQLEAESTTGVNMSDMI 60
           MEEFY  N+ VI++Y+N             G  H A MV  +MLQLEAE TTG+NMSDMI
Sbjct: 1   MEEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMI 60

Query: 61  KAQIANHPLYPKLVSAYIECQKVGASPQMASLLEQIGLENHNPRSCIELGADPQLDNFME 120
           K QI NHPLYPKLVSAYIECQKVGA PQ+ASLLE+IG ENH  RS IELGADPQLDNFME
Sbjct: 61  KTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIELGADPQLDNFME 120

Query: 121 SYCEVLHQYKNELSKPFDEAAVFLTNIKLELSNLCKGSFTATFDSRSVMNDEVAGTLEEE 180
           SYCEVLHQYKNELSKPFDEA +FLTNI+LELSNLCKGSFT   DSRS MNDEV+GT EEE
Sbjct: 121 SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMLDSRSAMNDEVSGTPEEE 180

Query: 181 PSSYGEMEMPGNRESLCTRQTNQDLKEMLLKKYSGYVSNLKKEFLKKRKKEKLPKDARMT 240
           PSSY E+EMP N E  CTR+TNQDLKEMLLKKYSGY+S+LKKEFLKKRKKEKLPKDARM 
Sbjct: 181 PSSYEEVEMPRNHEPFCTRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240

Query: 241 LFEWWNTHYKWPYPTEEEKSKLSDITGLEQKQINNWFINQRKRHWKPPEDIRFALMAGAG 292
           L +WWNTHYKWPYPTEEEKSKLS  TGL+QKQINNWFINQRKRHWKPPED+RF LM G G
Sbjct: 241 LLDWWNTHYKWPYPTEEEKSKLSITTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG 300

[Close]

BLAST of Sed0005255.1 vs. ExPASy TrEMBL
Match: A0A1S3BVM4 (homeobox protein knotted-1-like 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494133 PE=3 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 3.1e-130
Identity = 237/306 (77.45%), Postives = 256/306 (83.66%), Query Frame = 0


Query: 1   MEEFY--NSSVISTYTN-------------GGFHGAHMVGGEMLQLEAESTTGVNMSDMI 60
           MEEFY  N+ VI++Y+N             G  H A MV  +MLQLEAE TTG+NMSDMI
Sbjct: 1   MEEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMI 60

Query: 61  KAQIANHPLYPKLVSAYIECQKVGASPQMASLLEQIGLENHNPRSCIELGADPQLDNFME 120
           K QI NHPLYPKLVSAYIECQKVGA PQ+ASLLE+IG ENH  RS IELGADPQLDNFME
Sbjct: 61  KTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIELGADPQLDNFME 120

Query: 121 SYCEVLHQYKNELSKPFDEAAVFLTNIKLELSNLCKGSFTATFDSRSVMNDEVAGTLEEE 180
           SYCEVLHQYKNELSKPFDEA +FLTNI+LELSNLCKGSFT   DSRS MNDEV+GT EEE
Sbjct: 121 SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMLDSRSAMNDEVSGTPEEE 180

Query: 181 PSSYGEMEMPGNRESLCTRQTNQDLKEMLLKKYSGYVSNLKKEFLKKRKKEKLPKDARMT 240
           PSSY E+EMP N E  CTR+TNQDLKEMLLKKYSGY+S+LKKEFLKKRKKEKLPKDARM 
Sbjct: 181 PSSYEEVEMPRNHEPFCTRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240

Query: 241 LFEWWNTHYKWPYPTEEEKSKLSDITGLEQKQINNWFINQRKRHWKPPEDIRFALMAGAG 292
           L +WWNTHYKWPYPTEEEKSKLS  TGL+QKQINNWFINQRKRHWKPPED+RF LM G G
Sbjct: 241 LLDWWNTHYKWPYPTEEEKSKLSITTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG 300

[Close]

BLAST of Sed0005255.1 vs. ExPASy TrEMBL
Match: A0A6J1FBP5 (homeobox protein knotted-1-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111443969 PE=3 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 5.2e-130
Identity = 239/312 (76.60%), Postives = 258/312 (82.69%), Query Frame = 0


Query: 1   MEEFY--NSSVISTYTN-------------GGFHGAHMVGGEMLQLEAESTTGVNMSDMI 60
           MEEFY  NSSVIS YTN             GG HGA M+  EM+QLEAESTTG+NMS++I
Sbjct: 1   MEEFYRLNSSVISAYTNGVVASEAIASTSSGGVHGAQMMNNEMIQLEAESTTGLNMSEII 60

Query: 61  KAQIANHPLYPKLVSAYIECQKVGASPQMASLLEQIGLENHNPRSCIELGADPQLDNFME 120
           K QI NHPLY KLVSAYIECQKVGA PQ+A LLE+IG ENH PRSCI LGADPQLDNFME
Sbjct: 61  KTQIVNHPLYCKLVSAYIECQKVGAPPQVACLLEEIGRENHPPRSCIVLGADPQLDNFME 120

Query: 121 SYCEVLHQYKNELSKPFDEAAVFLTNIKLELSNLCKGSFTATFDSRSVMNDEVAGTLEEE 180
           SYC VLHQYKNEL+KPFDEA +FLTNI+LELSNLCKGSFTAT DSR   NDEVA T E+E
Sbjct: 121 SYCGVLHQYKNELTKPFDEATMFLTNIELELSNLCKGSFTATSDSRPATNDEVAETPEDE 180

Query: 181 PSSYGEMEMPGNRESLCTRQTNQDLKEMLLKKYSGYVSNLKKEFLKKRKKEKLPKDARMT 240
           PSSY E+EMPGN E   TRQTNQDLKEMLLKKYSGY+S+LKK+FLKKRKKEKLPKDARM 
Sbjct: 181 PSSYREVEMPGNHEPFGTRQTNQDLKEMLLKKYSGYLSSLKKDFLKKRKKEKLPKDARMA 240

Query: 241 LFEWWNTHYKWPYPTEEEKSKLSDITGLEQKQINNWFINQRKRHWKPPEDIRFALM---- 292
           LF+WWNTHYKWPYPTEEEKSKLS ITGL+QKQINNWFINQRKRHW PPE++RFALM    
Sbjct: 241 LFDWWNTHYKWPYPTEEEKSKLSGITGLDQKQINNWFINQRKRHWNPPEEMRFALMDSVG 300

[Close]

BLAST of Sed0005255.1 vs. ExPASy TrEMBL
Match: A0A6J1G3R0 (homeobox protein knotted-1-like 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450478 PE=3 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.2e-129
Identity = 240/316 (75.95%), Postives = 261/316 (82.59%), Query Frame = 0


Query: 1   MEEFY--NSSVISTYTN-------------GGFHGAHMVGGEMLQLEAESTTGVNMSDMI 60
           M+EFY  N+ V+S+Y+N             G  H A MV  E+L LEAE TTG+NMSDMI
Sbjct: 1   MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMI 60

Query: 61  KAQIANHPLYPKLVSAYIECQKVGASPQMASLLEQIGLENHNPRSCIELGADPQLDNFME 120
           K QI NHPLYPKLVSAYIECQKVGA PQ+ASLLE+IG ENH  RSCIELGADPQLDNFME
Sbjct: 61  KTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSCIELGADPQLDNFME 120

Query: 121 SYCEVLHQYKNELSKPFDEAAVFLTNIKLELSNLCKGSFTATFDSRSVMNDEVAGTLEEE 180
           SYCEVLHQYKNELSKPFDEAA+FLTNI+LELSNLCKGSFTAT +SRS +NDEVAGT EEE
Sbjct: 121 SYCEVLHQYKNELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAINDEVAGTSEEE 180

Query: 181 PSSYGEMEMPGNRESLCTRQTNQDLKEMLLKKYSGYVSNLKKEFLKKRKKEKLPKDARMT 240
           PSSYGE+E  GN E   TR+TNQDLKEMLLKKYSGY+S+LKKEFLKKRKKEKLPKDARM 
Sbjct: 181 PSSYGEVETTGNHEPFSTRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240

Query: 241 LFEWWNTHYKWPYPTEEEKSKLSDITGLEQKQINNWFINQRKRHWKPPEDIRFALMAGA- 292
           L EWW+THYKWPYPTEEEKSKLS ITGL+QKQINNWFINQRKRHWKPPED+RF LM GA 
Sbjct: 241 LLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAG 300

[Close]

BLAST of Sed0005255.1 vs. TAIR 10
Match: AT1G23380.1 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 249.6 bits (636), Expect = 3.1e-66
Identity = 128/244 (52.46%), Postives = 171/244 (70.08%), Query Frame = 0


Query: 44  MIKAQIANHPLYPKLVSAYIECQKVGASPQMASLLEQIGLENH------NPRSCIELGAD 103
           +IKA+IA HP YP+L+ AYI+CQKVGA P++A LLE+I  E+        P SC   GAD
Sbjct: 84  VIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLEEIQRESDVYKQEVVPSSC--FGAD 143

Query: 104 PQLDNFMESYCEVLHQYKNELSKPFDEAAVFLTNIKLELSNLCKGSFTATFDSRSVMNDE 163
           P+LD FME+YC++L +YK++L++PFDEA  FL  I+++L NLC G  +A    R V  D 
Sbjct: 144 PELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCTGVESA----RGVSEDG 203

Query: 164 VAGTLEEEPSSYGEMEMPGNRESLCTRQTNQDLKEMLLKKYSGYVSNLKKEFLKKRKKEK 223
           V  +  +E  S G+ E+  +    C    ++DLK+ LL+K+   +S LK EF KK+KK K
Sbjct: 204 VISS--DEELSGGDHEVAEDGRQRC---EDRDLKDRLLRKFGSRISTLKLEFSKKKKKGK 263

Query: 224 LPKDARMTLFEWWNTHYKWPYPTEEEKSKLSDITGLEQKQINNWFINQRKRHWKPPEDIR 282
           LP++AR  L +WWN HYKWPYPTE +K  L+D TGL+QKQINNWFINQRKRHWKP E++ 
Sbjct: 264 LPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPSENMP 316

[Close]

BLAST of Sed0005255.1 vs. TAIR 10
Match: AT1G70510.1 (KNOTTED-like from Arabidopsis thaliana 2 )

HSP 1 Score: 248.8 bits (634), Expect = 5.3e-66
Identity = 131/297 (44.11%), Postives = 193/297 (64.98%), Query Frame = 0


Query: 1   MEEFYNSSVISTYTN-----GGFHGAHMVGGEMLQLEAESTTGVNMSDMIKAQIANHPLY 60
           M   Y S + ST  +     G    A  +  E+L    ++    ++S +IK++IA+HPLY
Sbjct: 21  MPSDYQSLICSTTGDNQRLFGSDELATALSSELLPRIRKAEDNFSLS-VIKSKIASHPLY 80

Query: 61  PKLVSAYIECQKVGASPQMASLLEQIGLENH------NPRSCIELGADPQLDNFMESYCE 120
           P+L+  YI+CQKVGA  ++A +LE+I  ENH       P SC   GADP+LD FME+YC+
Sbjct: 81  PRLLQTYIDCQKVGAPMEIACILEEIQRENHVYKRDVAPLSC--FGADPELDEFMETYCD 140

Query: 121 VLHQYKNELSKPFDEAAVFLTNIKLELSNLCKGSFTATFDSRSVMNDEVAGTLEEEPSSY 180
           +L +YK +L++PFDEA  F+  I+++L NLC G  +AT      ++D+ A + +EE    
Sbjct: 141 ILVKYKTDLARPFDEATTFINKIEMQLQNLCTGPASAT-----ALSDDGAVSSDEELRED 200

Query: 181 GEMEMPGNRESLCTRQTNQDLKEMLLKKYSGYVSNLKKEFLKKRKKEKLPKDARMTLFEW 240
            ++    +++    R  ++DLK+ LL+K+  ++S+LK EF KK+KK KLP++AR  L +W
Sbjct: 201 DDIAADDSQQ----RSNDRDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQALLDW 260

Query: 241 WNTHYKWPYPTEEEKSKLSDITGLEQKQINNWFINQRKRHWKPPEDIRFALMAGAGE 287
           WN H KWPYPTE +K  L++ TGL+QKQINNWFINQRKRHWKP E++ F +M  + E
Sbjct: 261 WNVHNKWPYPTEGDKISLAEETGLDQKQINNWFINQRKRHWKPSENMPFDMMDDSNE 305

[Close]

BLAST of Sed0005255.1 vs. TAIR 10
Match: AT1G23380.2 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 244.6 bits (623), Expect = 9.9e-65
Identity = 128/246 (52.03%), Postives = 171/246 (69.51%), Query Frame = 0


Query: 44  MIKAQIANHPLYPKLVSAYIECQK--VGASPQMASLLEQIGLENH------NPRSCIELG 103
           +IKA+IA HP YP+L+ AYI+CQK  VGA P++A LLE+I  E+        P SC   G
Sbjct: 84  VIKAKIACHPSYPRLLQAYIDCQKKQVGAPPEIACLLEEIQRESDVYKQEVVPSSC--FG 143

Query: 104 ADPQLDNFMESYCEVLHQYKNELSKPFDEAAVFLTNIKLELSNLCKGSFTATFDSRSVMN 163
           ADP+LD FME+YC++L +YK++L++PFDEA  FL  I+++L NLC G  +A    R V  
Sbjct: 144 ADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCTGVESA----RGVSE 203

Query: 164 DEVAGTLEEEPSSYGEMEMPGNRESLCTRQTNQDLKEMLLKKYSGYVSNLKKEFLKKRKK 223
           D V  +  +E  S G+ E+  +    C    ++DLK+ LL+K+   +S LK EF KK+KK
Sbjct: 204 DGVISS--DEELSGGDHEVAEDGRQRC---EDRDLKDRLLRKFGSRISTLKLEFSKKKKK 263

Query: 224 EKLPKDARMTLFEWWNTHYKWPYPTEEEKSKLSDITGLEQKQINNWFINQRKRHWKPPED 282
            KLP++AR  L +WWN HYKWPYPTE +K  L+D TGL+QKQINNWFINQRKRHWKP E+
Sbjct: 264 GKLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPSEN 318

[Close]

BLAST of Sed0005255.1 vs. TAIR 10
Match: AT1G62360.1 (KNOX/ELK homeobox transcription factor )

HSP 1 Score: 230.7 bits (587), Expect = 1.5e-60
Identity = 122/281 (43.42%), Postives = 174/281 (61.92%), Query Frame = 0


Query: 7   SSVISTYTNGGFHGAHMVGGEMLQLEAESTTGVNMSDMIKAQIANHPLYPKLVSAYIECQ 66
           SS    Y+    H   +V G +    + S+     S  +KA+I  HP Y +L++AY+ CQ
Sbjct: 88  SSCAPAYSLMEIHHNEIVAGGINPCSSSSS-----SASVKAKIMAHPHYHRLLAAYVNCQ 147

Query: 67  KVGASPQMASLLEQ------IGLENHNPRSCIELGADPQLDNFMESYCEVLHQYKNELSK 126
           KVGA P++ + LE+          +  P  C  LG DP LD FME+YCE+L +Y+ ELSK
Sbjct: 148 KVGAPPEVVARLEEACSSAAAAAASMGPTGC--LGEDPGLDQFMEAYCEMLVKYEQELSK 207

Query: 127 PFDEAAVFLTNIKLELSNLCKGSFTATFDSRSVMNDEVAGTLEEEPSSYGEMEMPGNRES 186
           PF EA VFL  ++ +  +L       +  S S  +      ++   +   E E+  N E 
Sbjct: 208 PFKEAMVFLQRVECQFKSL-------SLSSPSSFSGYGETAIDRNNNGSSEEEVDMNNEF 267

Query: 187 LCTRQTNQDLKEMLLKKYSGYVSNLKKEFLKKRKKEKLPKDARMTLFEWWNTHYKWPYPT 246
           +  +  +++LK  LL+KYSGY+ +LK+EF+KKRKK KLPK+AR  L +WW+ HYKWPYP+
Sbjct: 268 VDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 327

Query: 247 EEEKSKLSDITGLEQKQINNWFINQRKRHWKPPEDIRFALM 282
           E++K  L++ TGL+QKQINNWFINQRKRHWKP ED++F +M
Sbjct: 328 EQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVM 354

[Close]

BLAST of Sed0005255.1 vs. TAIR 10
Match: AT4G08150.1 (KNOTTED-like from Arabidopsis thaliana )

HSP 1 Score: 226.5 bits (576), Expect = 2.8e-59
Identity = 118/259 (45.56%), Postives = 166/259 (64.09%), Query Frame = 0


Query: 32  EAESTTGVNMSDM--IKAQIANHPLYPKLVSAYIECQKVGASPQMASLL--EQIGLENHN 91
           EA +    N+SD+  +KA+I  HP Y  L+ AY++CQK+GA P +   +   +   E   
Sbjct: 119 EANNNNNDNVSDVEAMKAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQ 178

Query: 92  PRSCIELGA---DPQLDNFMESYCEVLHQYKNELSKPFDEAAVFLTNIKLELSNLCKGSF 151
            RS   + A   DP+LD FME+YC++L +Y+ EL++P  EA  F+  I+ +LS LC+   
Sbjct: 179 QRSTPSVSASSRDPELDQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLCQSPI 238

Query: 152 TATFDSRSVMNDEVAGTLEEEPSSYGEMEMPGNRESLCTRQTNQDLKEMLLKKYSGYVSN 211
               +     ++  +   E+E +S GE E+P     +  R  +++LK  LLKKYSGY+S+
Sbjct: 239 HILNNPDGKSDNMGSSDEEQENNSGGETELP----EIDPRAEDRELKNHLLKKYSGYLSS 298

Query: 212 LKKEFLKKRKKEKLPKDARMTLFEWWNTHYKWPYPTEEEKSKLSDITGLEQKQINNWFIN 271
           LK+E  KK+KK KLPK+AR  L  WW  HYKWPYP+E EK  L++ TGL+QKQINNWFIN
Sbjct: 299 LKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFIN 358

Query: 272 QRKRHWKPPEDIRFALMAG 284
           QRKRHWKP ED++F +M G
Sbjct: 359 QRKRHWKPSEDMQFMVMDG 373

The following BLAST results are available for this feature:

BLAST of Sed0005255.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156368.1	3.8e-135	82.09	homeobox protein knotted-1-like 1 isoform X1 [Momordica charantia]	[more]
XP_038889741.1	3.6e-133	78.43	homeobox protein knotted-1-like 1 [Benincasa hispida]	[more]
XP_023537573.1	1.7e-130	77.27	homeobox protein knotted-1-like 1 [Cucurbita pepo subsp. pepo]	[more]
KAG6599184.1	6.3e-130	77.42	Homeobox protein knotted-1-like 1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008453416.1	6.3e-130	77.45	PREDICTED: homeobox protein knotted-1-like 1 isoform X1 [Cucumis melo] >KAA00480...	[more]

BLAST of Sed0005255.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2Y007	5.5e-76	55.69	Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica OX=39946 GN=OSH...	[more]
Q7GDL5	5.5e-76	55.69	Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica OX=39947 GN=O...	[more]
Q9FP29	3.5e-75	57.09	Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=OS...	[more]
Q84JS6	4.3e-65	52.46	Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana OX=3702 GN=KNAT6 PE=1 ...	[more]
P46640	7.4e-65	44.11	Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 ...	[more]

BLAST of Sed0005255.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DQF7	1.9e-135	82.09	homeobox protein knotted-1-like 1 isoform X1 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A5D3BBX6	3.1e-130	77.45	Homeobox protein knotted-1-like 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3BVM4	3.1e-130	77.45	homeobox protein knotted-1-like 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A6J1FBP5	5.2e-130	76.60	homeobox protein knotted-1-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111443969 ...	[more]
A0A6J1G3R0	1.2e-129	75.95	homeobox protein knotted-1-like 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Sed0005255.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23380.1	3.1e-66	52.46	KNOTTED1-like homeobox gene 6	[more]
AT1G70510.1	5.3e-66	44.11	KNOTTED-like from Arabidopsis thaliana 2	[more]
AT1G23380.2	9.9e-65	52.03	KNOTTED1-like homeobox gene 6	[more]
AT1G62360.1	1.5e-60	43.42	KNOX/ELK homeobox transcription factor	[more]
AT4G08150.1	2.8e-59	45.56	KNOTTED-like from Arabidopsis thaliana	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005540	KNOX1	SMART	SM01255	KNOX1_2	coord: 43..87 e-value: 3.1E-19 score: 79.9
IPR005540	KNOX1	PFAM	PF03790	KNOX1	coord: 45..86 e-value: 2.7E-18 score: 65.4
IPR005539	ELK domain	SMART	SM01188	ELK_2	coord: 189..210 e-value: 2.0E-5 score: 34.0
IPR005539	ELK domain	PFAM	PF03789	ELK	coord: 189..210 e-value: 2.7E-8 score: 33.7
IPR005539	ELK domain	PROSITE	PS51213	ELK	coord: 189..209 score: 10.475587
IPR005541	KNOX2	SMART	SM01256	KNOX2_2	coord: 90..141 e-value: 6.5E-18 score: 75.5
IPR005541	KNOX2	PFAM	PF03791	KNOX2	coord: 94..140 e-value: 1.6E-19 score: 69.1
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 211..276 e-value: 4.3E-10 score: 49.5
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 209..272 score: 12.51939
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 221..272 e-value: 2.98705E-12 score: 58.7941
IPR008422	Homeobox KN domain	PFAM	PF05920	Homeobox_KN	coord: 229..268 e-value: 6.1E-17 score: 61.2
None	No IPR available	GENE3D	1.10.10.60		coord: 206..277 e-value: 6.5E-24 score: 85.3
None	No IPR available	PANTHER	PTHR11850:SF221	HOMEOBOX PROTEIN KNOTTED-1-LIKE 10	coord: 32..283
None	No IPR available	PANTHER	PTHR11850	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	coord: 32..283
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 247..270
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 211..275

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0005255	Sed0005255	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0005255.1-three_prime_utr	Sed0005255.1-three_prime_utr-LG11:3964584..3964635	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0005255.1-exon	Sed0005255.1-exon-LG11:3964584..3964791	exon
Sed0005255.1-exon	Sed0005255.1-exon-LG11:3964878..3965131	exon
Sed0005255.1-exon	Sed0005255.1-exon-LG11:3966305..3966458	exon
Sed0005255.1-exon	Sed0005255.1-exon-LG11:3968600..3968710	exon
Sed0005255.1-exon	Sed0005255.1-exon-LG11:3968822..3969103	exon
Sed0005255.1-exon	Sed0005255.1-exon-LG11:3969288..3969329	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0005255.1-cds	Sed0005255.1-cds-LG11:3964636..3964791	CDS
Sed0005255.1-cds	Sed0005255.1-cds-LG11:3964878..3965131	CDS
Sed0005255.1-cds	Sed0005255.1-cds-LG11:3966305..3966458	CDS
Sed0005255.1-cds	Sed0005255.1-cds-LG11:3968600..3968710	CDS
Sed0005255.1-cds	Sed0005255.1-cds-LG11:3968822..3969022	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0005255.1-five_prime_utr	Sed0005255.1-five_prime_utr-LG11:3969023..3969103	five_prime_UTR
Sed0005255.1-five_prime_utr	Sed0005255.1-five_prime_utr-LG11:3969288..3969329	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0005255.1	Sed0005255.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding