Sed0004854.1 (mRNA) Chayote v1

Overview


Name	Sed0004854.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Adenine nucleotide alpha hydrolases-like superfamily protein
Location	LG06: 35997110 .. 35999014 (+)
Sequence length	495
RNA-Seq Expression	Sed0004854.1
Synteny	Sed0004854.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGCGGGAAATGGTTGAAGAGGAACGGACAGAGAATCGTGGTCGCAGTGGATGAGAGCGAAGAGAGCATGTTCGATTTGAAATGGTGCCTCTCGAATCTCAATTCTCAACACACCAATAACACTCTCATTCTCCTCTACGTCAAGCCCCCGCCCGCAATCTCCATCTCTTCGTTCGACGCCCCCGGTAAAAAAAAATCAAAACAACAAGAATCATACGAAGAATTATACTTTATTTTTATGATACAATAAAAAGATGATATAGAATCAAGGTACCTCCCCATTTAGATTTTGAATCTAGTTCATGAGTTCGATTTCGATTGTGTTAGGGTATGTATTTTTGAGGGACGTGATTTCAGCTATGGAAAAGCACAGCAAGGATTTGGTTCGTGCGGTCATGAGGAGAGCTGAGGCTGTTTGTGCGAATTTCAGCGACAACGTAATTGATCAACAAGCTATCTCTCGTTCTCTTTCGATTTGGGATGATTTTTCTTATCGGCATTTTGTCGAACACCTGTGTTGCAGGTGAATTTGGAGAGAGTGGTCGGGACCGGGGACGCGAAGAATGTCATATGTCGAACTGTGGAGAAGCTTGGAGCTGATACCTTGGTAAGGGGATGTCACGGTTATGGCTTCATCCAGAGGTGCTTAGTGTTTCTTTTTCTCAACTCTTTTTTAAACTTTAAAATCTCATTTTCAATCTCACTTTTTGTTAACTCAATCTTGTTATTATTAAATTAAAAAAAAAAAAGTTAATGTGTACACATTTTTGGCGATTTTGAATCTAACTTTTGAATCTTATTTCATTTTGGTTCTTAATTTGCTCAAGGTCTTGGAGGGAGTTTGGTTCTTCAAAATTTCCATTTAGATACATTTATTTTACTTTAATGTTTAAGAACGAAAGACATTGAAAATTATAAAAATACATGAAAGAGAATGAATCCAATCACCCCTACTCTTTTGAGAAAGTTAAATGTTTAGGAGTCACGAGGTGATTGGTCTAGCTTCCGAACAACCAACTTGAGTAGGGTTAAACATATTTTTTATTTTGAAAAAAAATCTAAAAGTATATAACAAAACACAACCATAAAAAAAAATGAAATTTGTTAGAGTGTTTATAAGTTTAGTTTTTTAAAAATAAAATCTTAAATAAAAGATAGAAATATATACTTCTCATTTTCAGTTTCGAATTAAAAAATACATGGAGTTGAAACTTTTAAGAACCAATTAAGCTATACTCTTAACGGGTTCTTAATTCCTCTATTTTAGTGGTCCAAAACTTTGATGAATGCATATCAAGGTTGAATTTTGTATTGGAAAAAACCCTTCCTTAATTATCGCAGGAACAAGTGAGAAATTAAAAAGAAAAACAATAAAAGACAACGTACAAGATTTTACATGAAAAAACTTCTAAATAAAGAAAAAAAATCACGGTAAAAAAGAACTACTATATGAAAAATTGTTATAATTACAAAGAATTCTCTCTCGACCCTATATATATAAACACTTTCCTCAAAGTTTATACTAACCGTTTCTACACTTTCCACGAAAGAATGCAAAAGGAATTTAAGAGTCGGTACACCAAATTTAAAATTCCAACTGCTATACTTTGAAACCAAACCAATTGCTTTAGTTGGAGCATACCACTTCCTTTTAGCTTTCCGATTTCTTATACTTTTTTTGTTCCTTCATCCATTCCACGTAAAGATTCTTTTTCCTAATATTTTGCCAAAATTGTAACACTTTTAACATTAATACCTTATCCGTGATTAAATATGAAATAATTATCACTAATTACACTGTCTTTTCTTAATTTGTGTTTGCAGGGCGTTGCTCGGAAGTGTAAGCGATTACTGCGCTAAATGTGCAAAATGCCCTGTGGTTATAGTGAAGCAACCTTAA

mRNA sequence

ATGGAAGGCGGGAAATGGTTGAAGAGGAACGGACAGAGAATCGTGGTCGCAGTGGATGAGAGCGAAGAGAGCATGTTCGATTTGAAATGGTGCCTCTCGAATCTCAATTCTCAACACACCAATAACACTCTCATTCTCCTCTACGTCAAGCCCCCGCCCGCAATCTCCATCTCTTCGTTCGACGCCCCCGGGTATGTATTTTTGAGGGACGTGATTTCAGCTATGGAAAAGCACAGCAAGGATTTGGTTCGTGCGGTCATGAGGAGAGCTGAGGCTGTTTGTGCGAATTTCAGCGACAACGTGAATTTGGAGAGAGTGGTCGGGACCGGGGACGCGAAGAATGTCATATGTCGAACTGTGGAGAAGCTTGGAGCTGATACCTTGGTAAGGGGATGTCACGGTTATGGCTTCATCCAGAGGGCGTTGCTCGGAAGTGTAAGCGATTACTGCGCTAAATGTGCAAAATGCCCTGTGGTTATAGTGAAGCAACCTTAA

Coding sequence (CDS)

ATGGAAGGCGGGAAATGGTTGAAGAGGAACGGACAGAGAATCGTGGTCGCAGTGGATGAGAGCGAAGAGAGCATGTTCGATTTGAAATGGTGCCTCTCGAATCTCAATTCTCAACACACCAATAACACTCTCATTCTCCTCTACGTCAAGCCCCCGCCCGCAATCTCCATCTCTTCGTTCGACGCCCCCGGGTATGTATTTTTGAGGGACGTGATTTCAGCTATGGAAAAGCACAGCAAGGATTTGGTTCGTGCGGTCATGAGGAGAGCTGAGGCTGTTTGTGCGAATTTCAGCGACAACGTGAATTTGGAGAGAGTGGTCGGGACCGGGGACGCGAAGAATGTCATATGTCGAACTGTGGAGAAGCTTGGAGCTGATACCTTGGTAAGGGGATGTCACGGTTATGGCTTCATCCAGAGGGCGTTGCTCGGAAGTGTAAGCGATTACTGCGCTAAATGTGCAAAATGCCCTGTGGTTATAGTGAAGCAACCTTAA

Protein sequence

MEGGKWLKRNGQRIVVAVDESEESMFDLKWCLSNLNSQHTNNTLILLYVKPPPAISISSFDAPGYVFLRDVISAMEKHSKDLVRAVMRRAEAVCANFSDNVNLERVVGTGDAKNVICRTVEKLGADTLVRGCHGYGFIQRALLGSVSDYCAKCAKCPVVIVKQP

Homology

[Close]

BLAST of Sed0004854.1 vs. NCBI nr
Match: KAG7018016.1 (Universal stress protein A-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 275.4 bits (703), Expect = 3.2e-70
Identity = 140/164 (85.37%), Postives = 143/164 (87.20%), Query Frame = 0


Query: 1   MEGGKWLKRNGQRIVVAVDESEESMFDLKWCLSNLNSQHTNNTLILLYVKPPPAISISSF 60
           ME  K LK NGQRIVVAVDESEESMF L+WCLSNL S  T NTLILLYVKP PAISISSF
Sbjct: 1   MEAAKSLKANGQRIVVAVDESEESMFALQWCLSNLTSPDTKNTLILLYVKPSPAISISSF 60

Query: 61  DAPGYVFLRDVISAMEKHSKDLVRAVMRRAEAVCANFSDNVNLERVVGTGDAKNVICRTV 120
           DAPGYVF  DVISAMEKH KDLV AVM+RAEAV A F+ NVNLERVVG GDAKNVICRTV
Sbjct: 61  DAPGYVFSSDVISAMEKHGKDLVSAVMKRAEAVYAKFNTNVNLERVVGRGDAKNVICRTV 120

Query: 121 EKLGADTLVRGCHGYGFIQRALLGSVSDYCAKCAKCPVVIVKQP 165
           EKLGADTLV GCHGYGF QRALLGSVSDYCAK AKCPVVIVKQP
Sbjct: 121 EKLGADTLVMGCHGYGFFQRALLGSVSDYCAKYAKCPVVIVKQP 164

[Close]

BLAST of Sed0004854.1 vs. NCBI nr
Match: XP_022935044.1 (universal stress protein PHOS32 [Cucurbita moschata])

HSP 1 Score: 274.2 bits (700), Expect = 7.1e-70
Identity = 140/164 (85.37%), Postives = 143/164 (87.20%), Query Frame = 0


Query: 1   MEGGKWLKRNGQRIVVAVDESEESMFDLKWCLSNLNSQHTNNTLILLYVKPPPAISISSF 60
           ME  K LK NGQRIVVAVDESEESMF L+WCLSNL S  T NTLILLYVKP PAISISSF
Sbjct: 1   MEAVKSLKANGQRIVVAVDESEESMFALQWCLSNLTSPDTKNTLILLYVKPSPAISISSF 60

Query: 61  DAPGYVFLRDVISAMEKHSKDLVRAVMRRAEAVCANFSDNVNLERVVGTGDAKNVICRTV 120
           DAPGYVF  DVISAMEKH KDLV AVM+RAEAV A F+ NVNLERVVG GDAKNVICRTV
Sbjct: 61  DAPGYVFSSDVISAMEKHGKDLVSAVMKRAEAVYAKFNTNVNLERVVGRGDAKNVICRTV 120

Query: 121 EKLGADTLVRGCHGYGFIQRALLGSVSDYCAKCAKCPVVIVKQP 165
           EKLGADTLV GCHGYGF QRALLGSVSDYCAK AKCPVVIVKQP
Sbjct: 121 EKLGADTLVMGCHGYGFFQRALLGSVSDYCAKYAKCPVVIVKQP 164

[Close]

BLAST of Sed0004854.1 vs. NCBI nr
Match: XP_023529125.1 (universal stress protein A-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.6 bits (693), Expect = 4.6e-69
Identity = 139/164 (84.76%), Postives = 142/164 (86.59%), Query Frame = 0


Query: 1   MEGGKWLKRNGQRIVVAVDESEESMFDLKWCLSNLNSQHTNNTLILLYVKPPPAISISSF 60
           ME  K LK NGQRIVVAVDESEESMF L+WCLSNL S  T NTLILLYVKP PAISISSF
Sbjct: 1   MEAAKSLKVNGQRIVVAVDESEESMFALQWCLSNLTSPDTKNTLILLYVKPSPAISISSF 60

Query: 61  DAPGYVFLRDVISAMEKHSKDLVRAVMRRAEAVCANFSDNVNLERVVGTGDAKNVICRTV 120
           DAPGYVF  DVISAMEKH KDLV AVM+RAEAV A F+ NVNLERVVG GDAKNVICRTV
Sbjct: 61  DAPGYVFSSDVISAMEKHGKDLVSAVMKRAEAVYAKFNTNVNLERVVGRGDAKNVICRTV 120

Query: 121 EKLGADTLVRGCHGYGFIQRALLGSVSDYCAKCAKCPVVIVKQP 165
           EKL ADTLV GCHGYGF QRALLGSVSDYCAK AKCPVVIVKQP
Sbjct: 121 EKLEADTLVMGCHGYGFFQRALLGSVSDYCAKYAKCPVVIVKQP 164

[Close]

BLAST of Sed0004854.1 vs. NCBI nr
Match: XP_022984075.1 (universal stress protein A-like protein [Cucurbita maxima])

HSP 1 Score: 265.4 bits (677), Expect = 3.3e-67
Identity = 136/162 (83.95%), Postives = 140/162 (86.42%), Query Frame = 0


Query: 1   MEGGKWLKRNGQRIVVAVDESEESMFDLKWCLSNLNSQHTNNTLILLYVKPPPAISISSF 60
           ME  K LK NGQRIVVAVDESEESMF L+WCLSNL S  T NTLILLYVKP PAISISSF
Sbjct: 1   MEAAKSLKANGQRIVVAVDESEESMFALQWCLSNLTSPDTKNTLILLYVKPSPAISISSF 60

Query: 61  DAPGYVFLRDVISAMEKHSKDLVRAVMRRAEAVCANFSDNVNLERVVGTGDAKNVICRTV 120
           DAPGYVF  DVISAMEK  KDLV AVM+RAEAV A F+ NV+LERVVG GDAKNVICRTV
Sbjct: 61  DAPGYVFSSDVISAMEKQGKDLVSAVMKRAEAVYAKFNTNVDLERVVGRGDAKNVICRTV 120

Query: 121 EKLGADTLVRGCHGYGFIQRALLGSVSDYCAKCAKCPVVIVK 163
           EKLGADTLV GCHGYGF QRALLGSVSDYCAK AKCPVVIVK
Sbjct: 121 EKLGADTLVMGCHGYGFFQRALLGSVSDYCAKYAKCPVVIVK 162

[Close]

BLAST of Sed0004854.1 vs. NCBI nr
Match: XP_022155260.1 (universal stress protein A-like protein [Momordica charantia])

HSP 1 Score: 264.6 bits (675), Expect = 5.6e-67
Identity = 132/164 (80.49%), Postives = 141/164 (85.98%), Query Frame = 0


Query: 1   MEGGKWLKRNGQRIVVAVDESEESMFDLKWCLSNLNSQHTNNTLILLYVKPPPAISISSF 60
           +EG K  K  GQRIVVAVDESEESM  L+WCLSNL S  T NTL+LLYVKP PAISIS F
Sbjct: 3   LEGAKSSKATGQRIVVAVDESEESMLALQWCLSNLTSHDTKNTLVLLYVKPSPAISISXF 62

Query: 61  DAPGYVFLRDVISAMEKHSKDLVRAVMRRAEAVCANFSDNVNLERVVGTGDAKNVICRTV 120
           DAPGYVF  DVISAMEK SKDLVR+VM+RAEAV  NF+ NVNLERVVGTGDAKNVICRTV
Sbjct: 63  DAPGYVFSNDVISAMEKQSKDLVRSVMKRAEAVFVNFNTNVNLERVVGTGDAKNVICRTV 122

Query: 121 EKLGADTLVRGCHGYGFIQRALLGSVSDYCAKCAKCPVVIVKQP 165
           EK+GADTLV GCHGYGF +RALLGSVSD+CAK AKCPVVIVK P
Sbjct: 123 EKIGADTLVMGCHGYGFFKRALLGSVSDHCAKYAKCPVVIVKHP 166

[Close]

BLAST of Sed0004854.1 vs. ExPASy Swiss-Prot
Match: Q8LGG8 (Universal stress protein A-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g01520 PE=1 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 2.7e-08
Identity = 38/141 (26.95%), Postives = 71/141 (50.35%), Query Frame = 0


Query: 29  KWCLSNLNSQHTNN-TLILLYVKPPPAISISSFDAPGYVF-----LRDVISAMEKHSKDL 88
           +W L  +   +T++  ++LL+V+    +    FD    ++      RD+  + +     L
Sbjct: 32  EWTLEKIVRSNTSDFKILLLHVQ---VVDEDGFDDVDSIYASPEDFRDMRQSNKAKGLHL 91

Query: 89  VRAVMRRAEAVCANFSDNVNLERVVGTGDAKNVICRTVEKLGADTLVRGCHGYGFIQRAL 148
           +   + +   +       V  E  + TGD K+VIC+ V+++  D LV G  G G  Q+  
Sbjct: 92  LEFFVNKCHEI------GVGCEAWIKTGDPKDVICQEVKRVRPDFLVVGSRGLGRFQKVF 151

Query: 149 LGSVSDYCAKCAKCPVVIVKQ 164
           +G+VS +C K A+CPV+ +K+
Sbjct: 152 VGTVSAFCVKHAECPVMTIKR 163

[Close]

BLAST of Sed0004854.1 vs. ExPASy Swiss-Prot
Match: Q8VYN9 (Universal stress protein PHOS32 OS=Arabidopsis thaliana OX=3702 GN=PHOS32 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 8.0e-08
Identity = 43/160 (26.88%), Postives = 74/160 (46.25%), Query Frame = 0


Query: 12  QRIVVAVDESEESMFDLKWCLSNLNSQHTNNTLILLYVKPPPAISISSFDAPGYVFLRDV 71
           ++I VAVD SEES F ++W + +       + ++LL+V P   +  + +         + 
Sbjct: 48  RKIGVAVDLSEESSFAVRWAVDHY--IRPGDAVVLLHVSPTSVLFGADWGPLPLKTQIED 107

Query: 72  ISAMEKHSKDLVRAVMRRAEAVCANFSDNVNLE---RVVGTGDAKNVICRTVEKLGADTL 131
            +A  + S++   A      A  A     +       +V   D +  +C  +E+LG   +
Sbjct: 108 PNAQPQPSQEDFDAFTSTKVADLAKPLKELGFPYKIHIVKDHDMRERLCLEIERLGLSAV 167

Query: 132 VRGCHGYGFIQR----ALLGSVSDYCAKCAKCPVVIVKQP 165
           + G  G+G  ++      LGSVSDYC     CPVV+V+ P
Sbjct: 168 IMGSRGFGAEKKRGSDGKLGSVSDYCVHHCVCPVVVVRYP 205

[Close]

BLAST of Sed0004854.1 vs. ExPASy Swiss-Prot
Match: Q8L4N1 (Universal stress protein PHOS34 OS=Arabidopsis thaliana OX=3702 GN=PHOS34 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.0e-07
Identity = 45/173 (26.01%), Postives = 73/173 (42.20%), Query Frame = 0


Query: 12  QRIVVAVDESEESMFDLKWCLSNLNSQHTNNTLILLYVK-----------------PPPA 71
           ++I VAVD SEES F ++W + +       + +++L+V                  PPP 
Sbjct: 45  RKIGVAVDLSEESAFAVRWAVDHY--IRPGDAVVILHVSPTSVLFGADWGPLPLQTPPPP 104

Query: 72  ISISSFDAPGYVFLRDVISAMEKHSKDLVRAVMRRAEAVCANFSDNVNLERVVGTGDAKN 131
            + +   A       D  +       DL + +        A F   ++   +V   D + 
Sbjct: 105 SAATDPGAQPKPSQEDFDAFTSSKVADLAKPLKE------AGFPHKIH---IVKDHDMRE 164

Query: 132 VICRTVEKLGADTLVRGCHGYGFIQR---ALLGSVSDYCAKCAKCPVVIVKQP 165
            +C   E+L    ++ G  G+G  +R     LGSVSDYC     CPVV+V+ P
Sbjct: 165 RLCLETERLNLSAVIMGSRGFGAEKRGSDGKLGSVSDYCVHHCVCPVVVVRYP 206

[Close]

BLAST of Sed0004854.1 vs. ExPASy TrEMBL
Match: A0A6J1F4A3 (universal stress protein PHOS32 OS=Cucurbita moschata OX=3662 GN=LOC111442029 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.4e-70
Identity = 140/164 (85.37%), Postives = 143/164 (87.20%), Query Frame = 0


Query: 1   MEGGKWLKRNGQRIVVAVDESEESMFDLKWCLSNLNSQHTNNTLILLYVKPPPAISISSF 60
           ME  K LK NGQRIVVAVDESEESMF L+WCLSNL S  T NTLILLYVKP PAISISSF
Sbjct: 1   MEAVKSLKANGQRIVVAVDESEESMFALQWCLSNLTSPDTKNTLILLYVKPSPAISISSF 60

Query: 61  DAPGYVFLRDVISAMEKHSKDLVRAVMRRAEAVCANFSDNVNLERVVGTGDAKNVICRTV 120
           DAPGYVF  DVISAMEKH KDLV AVM+RAEAV A F+ NVNLERVVG GDAKNVICRTV
Sbjct: 61  DAPGYVFSSDVISAMEKHGKDLVSAVMKRAEAVYAKFNTNVNLERVVGRGDAKNVICRTV 120

Query: 121 EKLGADTLVRGCHGYGFIQRALLGSVSDYCAKCAKCPVVIVKQP 165
           EKLGADTLV GCHGYGF QRALLGSVSDYCAK AKCPVVIVKQP
Sbjct: 121 EKLGADTLVMGCHGYGFFQRALLGSVSDYCAKYAKCPVVIVKQP 164

[Close]

BLAST of Sed0004854.1 vs. ExPASy TrEMBL
Match: A0A6J1J7P2 (universal stress protein A-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482495 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.6e-67
Identity = 136/162 (83.95%), Postives = 140/162 (86.42%), Query Frame = 0


Query: 1   MEGGKWLKRNGQRIVVAVDESEESMFDLKWCLSNLNSQHTNNTLILLYVKPPPAISISSF 60
           ME  K LK NGQRIVVAVDESEESMF L+WCLSNL S  T NTLILLYVKP PAISISSF
Sbjct: 1   MEAAKSLKANGQRIVVAVDESEESMFALQWCLSNLTSPDTKNTLILLYVKPSPAISISSF 60

Query: 61  DAPGYVFLRDVISAMEKHSKDLVRAVMRRAEAVCANFSDNVNLERVVGTGDAKNVICRTV 120
           DAPGYVF  DVISAMEK  KDLV AVM+RAEAV A F+ NV+LERVVG GDAKNVICRTV
Sbjct: 61  DAPGYVFSSDVISAMEKQGKDLVSAVMKRAEAVYAKFNTNVDLERVVGRGDAKNVICRTV 120

Query: 121 EKLGADTLVRGCHGYGFIQRALLGSVSDYCAKCAKCPVVIVK 163
           EKLGADTLV GCHGYGF QRALLGSVSDYCAK AKCPVVIVK
Sbjct: 121 EKLGADTLVMGCHGYGFFQRALLGSVSDYCAKYAKCPVVIVK 162

[Close]

BLAST of Sed0004854.1 vs. ExPASy TrEMBL
Match: A0A6J1DLY2 (universal stress protein A-like protein OS=Momordica charantia OX=3673 GN=LOC111022401 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.7e-67
Identity = 132/164 (80.49%), Postives = 141/164 (85.98%), Query Frame = 0


Query: 1   MEGGKWLKRNGQRIVVAVDESEESMFDLKWCLSNLNSQHTNNTLILLYVKPPPAISISSF 60
           +EG K  K  GQRIVVAVDESEESM  L+WCLSNL S  T NTL+LLYVKP PAISIS F
Sbjct: 3   LEGAKSSKATGQRIVVAVDESEESMLALQWCLSNLTSHDTKNTLVLLYVKPSPAISISXF 62

Query: 61  DAPGYVFLRDVISAMEKHSKDLVRAVMRRAEAVCANFSDNVNLERVVGTGDAKNVICRTV 120
           DAPGYVF  DVISAMEK SKDLVR+VM+RAEAV  NF+ NVNLERVVGTGDAKNVICRTV
Sbjct: 63  DAPGYVFSNDVISAMEKQSKDLVRSVMKRAEAVFVNFNTNVNLERVVGTGDAKNVICRTV 122

Query: 121 EKLGADTLVRGCHGYGFIQRALLGSVSDYCAKCAKCPVVIVKQP 165
           EK+GADTLV GCHGYGF +RALLGSVSD+CAK AKCPVVIVK P
Sbjct: 123 EKIGADTLVMGCHGYGFFKRALLGSVSDHCAKYAKCPVVIVKHP 166

[Close]

BLAST of Sed0004854.1 vs. ExPASy TrEMBL
Match: A0A1S3BY98 (universal stress protein A-like protein OS=Cucumis melo OX=3656 GN=LOC103494736 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.6e-67
Identity = 134/157 (85.35%), Postives = 137/157 (87.26%), Query Frame = 0


Query: 8   KRNGQRIVVAVDESEESMFDLKWCLSNLNSQHTNNTLILLYVKPPPAISISSFDAPGYVF 67
           K   QRIVVAVDESEESMF L+WCLSNL S  T NTLILLYVKPPPAISISSFDAPGYVF
Sbjct: 11  KGESQRIVVAVDESEESMFALQWCLSNLTSPDTKNTLILLYVKPPPAISISSFDAPGYVF 70

Query: 68  LRDVISAMEKHSKDLVRAVMRRAEAVCANFSDNVNLERVVGTGDAKNVICRTVEKLGADT 127
             +VISAMEK SKDLV AVM+RAEAV A FS NVNLERVVG GDAKNVICRTVEKLGADT
Sbjct: 71  SSEVISAMEKQSKDLVSAVMKRAEAVYAKFSSNVNLERVVGKGDAKNVICRTVEKLGADT 130

Query: 128 LVRGCHGYGFIQRALLGSVSDYCAKCAKCPVVIVKQP 165
           LV GCHGYGF QRALLGSVSDYCAK AKCPVVIVK P
Sbjct: 131 LVMGCHGYGFFQRALLGSVSDYCAKYAKCPVVIVKHP 167

[Close]

BLAST of Sed0004854.1 vs. ExPASy TrEMBL
Match: A0A0A0KTF3 (Usp domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G003620 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 7.9e-67
Identity = 137/165 (83.03%), Postives = 140/165 (84.85%), Query Frame = 0


Query: 2   EGGKWLKRNG--QRIVVAVDESEESMFDLKWCLSNLNSQHTNNTLILLYVKPPPAISISS 61
           E  K LK  G  QRIVVAVDESEESMF L+WCLSNL S  T NTLILLYVKPPPAISISS
Sbjct: 3   EAKKSLKAKGESQRIVVAVDESEESMFALQWCLSNLTSPDTKNTLILLYVKPPPAISISS 62

Query: 62  FDAPGYVFLRDVISAMEKHSKDLVRAVMRRAEAVCANFSDNVNLERVVGTGDAKNVICRT 121
           FDAPGYVF  +VISAMEK SKDLV AVM+RAEAV A FS NVNLERVVG GDAKNVICR 
Sbjct: 63  FDAPGYVFSSEVISAMEKQSKDLVNAVMKRAEAVYAKFSSNVNLERVVGKGDAKNVICRI 122

Query: 122 VEKLGADTLVRGCHGYGFIQRALLGSVSDYCAKCAKCPVVIVKQP 165
           VEKLGADTLV GCHGYGF QRALLGSVSDYCAK AKCPVVIVK P
Sbjct: 123 VEKLGADTLVMGCHGYGFFQRALLGSVSDYCAKYAKCPVVIVKHP 167

[Close]

BLAST of Sed0004854.1 vs. TAIR 10
Match: AT3G62550.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 169.1 bits (427), Expect = 3.0e-42
Identity = 86/152 (56.58%), Postives = 109/152 (71.71%), Query Frame = 0


Query: 12  QRIVVAVDESEESMFDLKWCLSNLNSQHTNNTLILLYVKPPPAISISSFDAPGYVFLRDV 71
           ++IVVAVDESEESM  L W L NL    +NNTLILLYVKPP  +  SS DA G++   D 
Sbjct: 7   RKIVVAVDESEESMEALSWSLDNLFPYGSNNTLILLYVKPPLPV-YSSLDAAGFIVTGDP 66

Query: 72  ISAMEKHSKDLVRAVMRRAEAVCANFSDNVNLERVVGTGDAKNVICRTVEKLGADTLVRG 131
           ++A++K+  +LV +VM R+  V  ++  ++N+ER VG GDAK VIC  V+KL  D LV G
Sbjct: 67  VAALKKYEYELVESVMARSRTVYQDYESDINIERRVGRGDAKEVICNAVQKLRVDMLVMG 126

Query: 132 CHGYGFIQRALLGSVSDYCAKCAKCPVVIVKQ 164
            H YGF +RALLGSVS+YCAK  KCPVVIVK+
Sbjct: 127 THDYGFFKRALLGSVSEYCAKRVKCPVVIVKK 157

[Close]

BLAST of Sed0004854.1 vs. TAIR 10
Match: AT1G09740.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 111.3 bits (277), Expect = 7.4e-25
Identity = 63/157 (40.13%), Postives = 91/157 (57.96%), Query Frame = 0


Query: 14  IVVAVDESEESMFDLKWCLSN--LNSQHTNNTLILLYVKPPPAISIS------SFDAPGY 73
           +VVAVD SE SM  L+W L N  L+S  ++++ ++L+V+P P+++         F  P  
Sbjct: 10  VVVAVDGSEVSMEALRWALDNLKLSSSSSDSSFVVLHVQPSPSVAAGVSPGTIPFGGPSG 69

Query: 74  VFLRDVISAMEKHSKDLVRAVMRRAEAVCANFSDNVNLERVVGTGDAKNVICRTVEKLGA 133
           + +    +A+E+H K +   ++  A  +CA  S NV  + V+  GD K  IC  VE L A
Sbjct: 70  LEVPAFTAAIEQHQKRITDTILEHASQICAEKSVNVKTQVVI--GDPKYKICEAVENLHA 129

Query: 134 DTLVRGCHGYGFIQRALLGSVSDYCAKCAKCPVVIVK 163
           D LV G   YG I+R  LGSVS+YC   A CPVVI+K
Sbjct: 130 DLLVMGSRAYGRIKRMFLGSVSNYCTNHAHCPVVIIK 164

[Close]

BLAST of Sed0004854.1 vs. TAIR 10
Match: AT2G47710.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-21
Identity = 58/153 (37.91%), Postives = 87/153 (56.86%), Query Frame = 0


Query: 14  IVVAVDESEESMFDLKWCLSNLNSQHTNNTLILLYV--KPPPAISISSFDAPGYVFLRDV 73
           +VV VD+SE+S + L+W L    + +  N    L++    P A+S      PG     +V
Sbjct: 10  MVVGVDDSEQSTYALEWTLDRFFAPYAPNYPFKLFIVHAKPNAVSAVGLAGPG---TAEV 69

Query: 74  ISAMEKHSKDLVRAVMRRAEAVCANFSDNVNLERVVGTGDAKNVICRTVEKLGADTLVRG 133
           +  ++   K     V+ +A+A+C + S +  +  V   GDA+N++C  V+K  A  LV G
Sbjct: 70  VPYVDADLKHTAAKVVEKAKAICQSRSVHGAVIEVF-EGDARNILCEVVDKHHASILVVG 129

Query: 134 CHGYGFIQRALLGSVSDYCAKCAKCPVVIVKQP 165
            HGYG I+RA+LGS SDYCA  A C V+IVK+P
Sbjct: 130 SHGYGAIKRAVLGSTSDYCAHHAHCSVMIVKKP 158

[Close]

BLAST of Sed0004854.1 vs. TAIR 10
Match: AT3G11930.2 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 95.1 bits (235), Expect = 5.5e-20
Identity = 56/165 (33.94%), Postives = 90/165 (54.55%), Query Frame = 0


Query: 12  QRIVVAVDESEESMFDLKWCLSNLN--------SQHTNNTLILLYVKPP----PAISISS 71
           +R+VVA+DES+ S + L+W + + +        ++  +  L +++V+ P     A     
Sbjct: 33  KRMVVAIDESDSSFYALQWVIDHFSNLLLTTAAAEAESGMLTVIHVQSPFNHFAAFPAGP 92

Query: 72  FDAPGYVFLRDVISAMEKHSKDLVRAVMRRAEAVCANFSDNVNLERVVGTGDAKNVICRT 131
             A        +I +++K  ++   A++ RA  +C   +  +  E +V  G+AK +IC  
Sbjct: 93  GGATAVYASSSMIESVKKAQQETSAALLSRALQMCR--AKQIRTETLVLEGEAKEMICEA 152

Query: 132 VEKLGADTLVRGCHGYGFIQRALLGSVSDYCAKCAKCPVVIVKQP 165
           VEK+  D LV G  G G I+RA LGSVSDYCA  A CP++IVK P
Sbjct: 153 VEKMHVDLLVVGSRGLGKIKRAFLGSVSDYCAHHANCPILIVKPP 195

[Close]

BLAST of Sed0004854.1 vs. TAIR 10
Match: AT3G11930.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 94.4 bits (233), Expect = 9.3e-20
Identity = 56/164 (34.15%), Postives = 92/164 (56.10%), Query Frame = 0


Query: 12  QRIVVAVDESEESMFDLKWCLSNLN--------SQHTNNTLILLYVKPPPAISISSFDAP 71
           +R+VVA+DES+ S + L+W + + +        ++  +  L +++V+ P     +    P
Sbjct: 33  KRMVVAIDESDSSFYALQWVIDHFSNLLLTTAAAEAESGMLTVIHVQSPFNHFAAFPAGP 92

Query: 72  GYVFL---RDVISAMEKHSKDLVRAVMRRAEAVCANFSDNVNLERVVGTGDAKNVICRTV 131
           G   +     +I +++K  ++   A++ RA  +C   +  +  E +V  G+AK +IC  V
Sbjct: 93  GGATVYASSSMIESVKKAQQETSAALLSRALQMCR--AKQIRTETLVLEGEAKEMICEAV 152

Query: 132 EKLGADTLVRGCHGYGFIQRALLGSVSDYCAKCAKCPVVIVKQP 165
           EK+  D LV G  G G I+RA LGSVSDYCA  A CP++IVK P
Sbjct: 153 EKMHVDLLVVGSRGLGKIKRAFLGSVSDYCAHHANCPILIVKPP 194

The following BLAST results are available for this feature:

BLAST of Sed0004854.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7018016.1	3.2e-70	85.37	Universal stress protein A-like protein [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022935044.1	7.1e-70	85.37	universal stress protein PHOS32 [Cucurbita moschata]	[more]
XP_023529125.1	4.6e-69	84.76	universal stress protein A-like protein [Cucurbita pepo subsp. pepo]	[more]
XP_022984075.1	3.3e-67	83.95	universal stress protein A-like protein [Cucurbita maxima]	[more]
XP_022155260.1	5.6e-67	80.49	universal stress protein A-like protein [Momordica charantia]	[more]

BLAST of Sed0004854.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LGG8	2.7e-08	26.95	Universal stress protein A-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g0...	[more]
Q8VYN9	8.0e-08	26.88	Universal stress protein PHOS32 OS=Arabidopsis thaliana OX=3702 GN=PHOS32 PE=1 S...	[more]
Q8L4N1	3.0e-07	26.01	Universal stress protein PHOS34 OS=Arabidopsis thaliana OX=3702 GN=PHOS34 PE=1 S...	[more]

BLAST of Sed0004854.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F4A3	3.4e-70	85.37	universal stress protein PHOS32 OS=Cucurbita moschata OX=3662 GN=LOC111442029 PE...	[more]
A0A6J1J7P2	1.6e-67	83.95	universal stress protein A-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482...	[more]
A0A6J1DLY2	2.7e-67	80.49	universal stress protein A-like protein OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A1S3BY98	4.6e-67	85.35	universal stress protein A-like protein OS=Cucumis melo OX=3656 GN=LOC103494736 ...	[more]
A0A0A0KTF3	7.9e-67	83.03	Usp domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G003620 PE=4 SV...	[more]

BLAST of Sed0004854.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62550.1	3.0e-42	56.58	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT1G09740.1	7.4e-25	40.13	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT2G47710.1	1.7e-21	37.91	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT3G11930.2	5.5e-20	33.94	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT3G11930.1	9.3e-20	34.15	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006015	Universal stress protein A family	PRINTS	PR01438	UNVRSLSTRESS	coord: 11..29 score: 27.16 coord: 140..162 score: 40.7 coord: 122..134 score: 36.92
IPR006016	UspA	PFAM	PF00582	Usp	coord: 12..162 e-value: 8.7E-25 score: 87.9
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620	HUPs	coord: 6..164 e-value: 8.1E-36 score: 125.9
None	No IPR available	PANTHER	PTHR31964:SF126	ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN	coord: 10..163
None	No IPR available	PANTHER	PTHR31964	ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN	coord: 10..163
None	No IPR available	CDD	cd00293	USP_Like	coord: 13..161 e-value: 2.25822E-25 score: 92.433
None	No IPR available	SUPERFAMILY	52402	Adenine nucleotide alpha hydrolases-like	coord: 12..163

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0004854	Sed0004854	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0004854.1-exon	Sed0004854.1-exon-LG06:35997110..35997299	exon
Sed0004854.1-exon	Sed0004854.1-exon-LG06:35997442..35997551	exon
Sed0004854.1-exon	Sed0004854.1-exon-LG06:35997638..35997756	exon
Sed0004854.1-exon	Sed0004854.1-exon-LG06:35998939..35999014	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0004854.1-cds	Sed0004854.1-cds-LG06:35997110..35997299	CDS
Sed0004854.1-cds	Sed0004854.1-cds-LG06:35997442..35997551	CDS
Sed0004854.1-cds	Sed0004854.1-cds-LG06:35997638..35997756	CDS
Sed0004854.1-cds	Sed0004854.1-cds-LG06:35998939..35999014	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0004854.1	Sed0004854.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding