Sed0004788.1 (mRNA) Chayote v1

Overview


Name	Sed0004788.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	F-box protein CPR30-like
Location	LG04: 9833649 .. 9835961 (+)
Sequence length	1981
RNA-Seq Expression	Sed0004788.1
Synteny	Sed0004788.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATGGCGACGGCGATGGATGATGATGCTGTGATGAGAAAGATTTTGTGGCGGCTGCCTATGAAGGCTCTGGTCCGATTGAAGTGCGTTTCGAAACACTGGTACGCCCTAATTACTTCTTTGCAGAACCAAAACAACGTTTTTGTGCGGCGCCGAGTGAAGAAGGAGGAGAGCGGTGAGATTGAAACCAGATTCTCCATCTTCCAATATCCCTTCTTCACCGATGACTCATGTTTGGGGCCAGCATTTAAGACTTCCAGCACCACCCACGGCTGTTCTCGCGGTATAGTCTGTTTCTCCAACAACACCGACGATATTTTCCTGTATAATCCCTCCACCCGAGAGCTTCGCAAGCTCCCCCCCTCCATTCTTCTCTTCCCTGATATTCTTGCCTTCCAATCAAGTGTTTCTTCCAGCCCCCCCTTCATGATCAATACTACTCTTCCCTGGAACCCCTCCATGAATTATACTCTTCCCCCCTTCCAAGGAGGTGTTTCTTCCAGTCCCCCCTTCATTAACAATACTTTTCCTCACTTCCAAGCAAGTGTTTACTCCAGTCCCCCCTTCATGAGCAATACTCTTCCCAACTTCCAAGGTGCCCCCTCCATCAACAATACTCTTCCCCCCTTCCAAGGTGTTTACTCCAGTCCCCCCTTCATGAACAATACTCTTCCCAACTTCCAAGGTGCCCCCTCCATCAACAATACTCTTCCCCCCTTCCAAGGTGTTTACTCCAGTCTCCCCTTCATGAACAATACTCTTCCACCCTTCCAAGGTGCCCCCTCCATCAACAATACTCTTCCCCCCTTCCAAGGTGCCCCCTCCATCAACAATTCTCTTCCCCCCTTCCAAGCAAGTGTTTATCCCAGTCCTCCTTACTCTCAAGGTTTTTATTCCACTCCCTCTCCCATTCCTATCTCCCCTTATTATAATCTTTCCTTCCAAGAAGATGTTCATTCGCATACCATAGGGGTCGGATTCGGTTATGATCACAAATCTGGGGATTTTAAGGTGGTTCGGGTTGTGGACTTTTATGCTCACACTCAGGATGCTAGTATGCCTCCTAGAGCAGAAGTATACGATTTGGGGAAAGATGGATGGAGAGAAATCAAAACCCCTATTCCTGCCAAGCCTATGCAGAATTCTTCCTTTGAGATCTACTACCAAGGATTTTATTATTGGTGGGCAGACAGCTTCCATGCTTCTGAAGTTATACTGTGGTTTCACTTTTCCAAAGAGGTTTTCGGCATTATTTCCATGCCTGAGGGACTCTCTTATGACAAGTTCTACACAGCCCTTGCTGTTTTGAATGAATCAATTGTTCTTTTTAATTATCCATGTCTTGAAAATGAAAGAACCTTCGATCTTTGGAAGTTGGTCAAGGATGATGATGATGATCATGGCCCTGAAGTGGTTTCATGGACAAAGCTCTTCACAATGGGTCCATTATTGGGGGTTGATCGTCCTTTGGTGTTTGTGAGTTCTGATGAACTTTTAATGGTGGACAATGAGGGACAACTAATATTGTGCAACATTTTTAACACCCAACACTGCAAGCGCCTCCCAATCAAAGGCAAACCCACGTCGTACCAAGCTTCACTTTTCACTAAGACTGCCCTGTCTCTCAAGTGAGGACATGGCTAAGCTATCATTCAAAATTACATGTTTCCAGGTACTATTTCTGTTTTGATTTCCTTTTTGCTTTTATGCAAAATAACATGTTTCCAGGTAGTAGGTATGATTTCTTCATGGGTCAGCGGATATCTTGAACTCTAGCTACTTTAGTTTTTGTATCCTCCAATTTCTTTTTTTCTTTCAAATCTAAGTCTAGTTGTGTTGTTTTCTACATTGAAATACTTGCTAAACAACTATCACTTTATGTATTTGTGTTGTTTTTCTTTTTCTCTTTTTTAGTTCAAACAGGGTTGTTGGACTCGAACCACAATTCTCGTGTTTGTGTTCTCCTTTTGTTAGAGATGATGGATGGATTATCAATCTCCATATCCACAATTGTCGAACTAAAGACGATAAGTATGTGGACAACGTAATTTTTGTTGATATTTTCTTTTATCAAACATGTGTAAATTGTTCCAACTTCCGACATAAAATGTGTGGTTTGATCTAAGAGGCTACTTCTTATGTTAAAACAACTCTAAGTGATACTGTTGAATGCCATTGACCGTGAGGAAAGATAAATCCTTAGGAGGAAGATGAGGGTTTATTTTTATGTGTAATGTTGGTAACGTTATGTGAGAAAATGTTGAATGAAAATCCTGTGTGTAAAAGATTGTATACTGGGGTTTGGAAAGG

mRNA sequence

ATGGCGATGGCGACGGCGATGGATGATGATGCTGTGATGAGAAAGATTTTGTGGCGGCTGCCTATGAAGGCTCTGGTCCGATTGAAGTGCGTTTCGAAACACTGGTACGCCCTAATTACTTCTTTGCAGAACCAAAACAACGTTTTTGTGCGGCGCCGAGTGAAGAAGGAGGAGAGCGGTGAGATTGAAACCAGATTCTCCATCTTCCAATATCCCTTCTTCACCGATGACTCATGTTTGGGGCCAGCATTTAAGACTTCCAGCACCACCCACGGCTGTTCTCGCGGTATAGTCTGTTTCTCCAACAACACCGACGATATTTTCCTGTATAATCCCTCCACCCGAGAGCTTCGCAAGCTCCCCCCCTCCATTCTTCTCTTCCCTGATATTCTTGCCTTCCAATCAAGTGTTTCTTCCAGCCCCCCCTTCATGATCAATACTACTCTTCCCTGGAACCCCTCCATGAATTATACTCTTCCCCCCTTCCAAGGAGGTGTTTCTTCCAGTCCCCCCTTCATTAACAATACTTTTCCTCACTTCCAAGCAAGTGTTTACTCCAGTCCCCCCTTCATGAACAATACTCTTCCCAACTTCCAAGGTGCCCCCTCCATCAACAATACTCTTCCCCCCTTCCAAGGTGTTTACTCCAGTCTCCCCTTCATGAACAATACTCTTCCACCCTTCCAAGGTGCCCCCTCCATCAACAATACTCTTCCCCCCTTCCAAGGTGCCCCCTCCATCAACAATTCTCTTCCCCCCTTCCAAGCAAGTGTTTATCCCAGTCCTCCTTACTCTCAAGGTTTTTATTCCACTCCCTCTCCCATTCCTATCTCCCCTTATTATAATCTTTCCTTCCAAGAAGATGTTCATTCGCATACCATAGGGGTCGGATTCGGTTATGATCACAAATCTGGGGATTTTAAGGTGGTTCGGGTTGTGGACTTTTATGCTCACACTCAGGATGCTAGTATGCCTCCTAGAGCAGAAGTATACGATTTGGGGAAAGATGGATGGAGAGAAATCAAAACCCCTATTCCTGCCAAGCCTATGCAGAATTCTTCCTTTGAGATCTACTACCAAGGATTTTATTATTGGTGGGCAGACAGCTTCCATGCTTCTGAAGTTATACTGTGGTTTCACTTTTCCAAAGAGGTTTTCGGCATTATTTCCATGCCTGAGGGACTCTCTTATGACAAGTTCTACACAGCCCTTGCTGTTTTGAATGAATCAATTGTTCTTTTTAATTATCCATGTCTTGAAAATGAAAGAACCTTCGATCTTTGGAAGTTGGTCAAGGATGATGATGATGATCATGGCCCTGAAGTGGTTTCATGGACAAAGCTCTTCACAATGGGTCCATTATTGGGGGTTGATCGTCCTTTGGTGTTTGTGAGTTCTGATGAACTTTTAATGGTGGACAATGAGGGACAACTAATATTGTGCAACATTTTTAACACCCAACACTGCAAGCGCCTCCCAATCAAAGGCAAACCCACGTCGTACCAAGCTTCACTTTTCACTAAGACTGCCCTGTCTCTCAAGTGAGGACATGGCTAAGCTATCATTCAAAATTACATGTTTCCAGTTCAAACAGGGTTGTTGGACTCGAACCACAATTCTCGTGTTTGTGTTCTCCTTTTGTTAGAGATGATGGATGGATTATCAATCTCCATATCCACAATTGTCGAACTAAAGACGATAAGTATGTGGACAACGTAATTTTTGTTGATATTTTCTTTTATCAAACATGTGTAAATTGTTCCAACTTCCGACATAAAATGTGTGGTTTGATCTAAGAGGCTACTTCTTATGTTAAAACAACTCTAAGTGATACTGTTGAATGCCATTGACCGTGAGGAAAGATAAATCCTTAGGAGGAAGATGAGGGTTTATTTTTATGTGTAATGTTGGTAACGTTATGTGAGAAAATGTTGAATGAAAATCCTGTGTGTAAAAGATTGTATACTGGGGTTTGGAAAGG

Coding sequence (CDS)

ATGGCGATGGCGACGGCGATGGATGATGATGCTGTGATGAGAAAGATTTTGTGGCGGCTGCCTATGAAGGCTCTGGTCCGATTGAAGTGCGTTTCGAAACACTGGTACGCCCTAATTACTTCTTTGCAGAACCAAAACAACGTTTTTGTGCGGCGCCGAGTGAAGAAGGAGGAGAGCGGTGAGATTGAAACCAGATTCTCCATCTTCCAATATCCCTTCTTCACCGATGACTCATGTTTGGGGCCAGCATTTAAGACTTCCAGCACCACCCACGGCTGTTCTCGCGGTATAGTCTGTTTCTCCAACAACACCGACGATATTTTCCTGTATAATCCCTCCACCCGAGAGCTTCGCAAGCTCCCCCCCTCCATTCTTCTCTTCCCTGATATTCTTGCCTTCCAATCAAGTGTTTCTTCCAGCCCCCCCTTCATGATCAATACTACTCTTCCCTGGAACCCCTCCATGAATTATACTCTTCCCCCCTTCCAAGGAGGTGTTTCTTCCAGTCCCCCCTTCATTAACAATACTTTTCCTCACTTCCAAGCAAGTGTTTACTCCAGTCCCCCCTTCATGAACAATACTCTTCCCAACTTCCAAGGTGCCCCCTCCATCAACAATACTCTTCCCCCCTTCCAAGGTGTTTACTCCAGTCTCCCCTTCATGAACAATACTCTTCCACCCTTCCAAGGTGCCCCCTCCATCAACAATACTCTTCCCCCCTTCCAAGGTGCCCCCTCCATCAACAATTCTCTTCCCCCCTTCCAAGCAAGTGTTTATCCCAGTCCTCCTTACTCTCAAGGTTTTTATTCCACTCCCTCTCCCATTCCTATCTCCCCTTATTATAATCTTTCCTTCCAAGAAGATGTTCATTCGCATACCATAGGGGTCGGATTCGGTTATGATCACAAATCTGGGGATTTTAAGGTGGTTCGGGTTGTGGACTTTTATGCTCACACTCAGGATGCTAGTATGCCTCCTAGAGCAGAAGTATACGATTTGGGGAAAGATGGATGGAGAGAAATCAAAACCCCTATTCCTGCCAAGCCTATGCAGAATTCTTCCTTTGAGATCTACTACCAAGGATTTTATTATTGGTGGGCAGACAGCTTCCATGCTTCTGAAGTTATACTGTGGTTTCACTTTTCCAAAGAGGTTTTCGGCATTATTTCCATGCCTGAGGGACTCTCTTATGACAAGTTCTACACAGCCCTTGCTGTTTTGAATGAATCAATTGTTCTTTTTAATTATCCATGTCTTGAAAATGAAAGAACCTTCGATCTTTGGAAGTTGGTCAAGGATGATGATGATGATCATGGCCCTGAAGTGGTTTCATGGACAAAGCTCTTCACAATGGGTCCATTATTGGGGGTTGATCGTCCTTTGGTGTTTGTGAGTTCTGATGAACTTTTAATGGTGGACAATGAGGGACAACTAATATTGTGCAACATTTTTAACACCCAACACTGCAAGCGCCTCCCAATCAAAGGCAAACCCACGTCGTACCAAGCTTCACTTTTCACTAAGACTGCCCTGTCTCTCAAGTGA

Protein sequence

MAMATAMDDDAVMRKILWRLPMKALVRLKCVSKHWYALITSLQNQNNVFVRRRVKKEESGEIETRFSIFQYPFFTDDSCLGPAFKTSSTTHGCSRGIVCFSNNTDDIFLYNPSTRELRKLPPSILLFPDILAFQSSVSSSPPFMINTTLPWNPSMNYTLPPFQGGVSSSPPFINNTFPHFQASVYSSPPFMNNTLPNFQGAPSINNTLPPFQGVYSSLPFMNNTLPPFQGAPSINNTLPPFQGAPSINNSLPPFQASVYPSPPYSQGFYSTPSPIPISPYYNLSFQEDVHSHTIGVGFGYDHKSGDFKVVRVVDFYAHTQDASMPPRAEVYDLGKDGWREIKTPIPAKPMQNSSFEIYYQGFYYWWADSFHASEVILWFHFSKEVFGIISMPEGLSYDKFYTALAVLNESIVLFNYPCLENERTFDLWKLVKDDDDDHGPEVVSWTKLFTMGPLLGVDRPLVFVSSDELLMVDNEGQLILCNIFNTQHCKRLPIKGKPTSYQASLFTKTALSLK

Homology

[Close]

BLAST of Sed0004788.1 vs. NCBI nr
Match: XP_038906036.1 (F-box protein CPR1-like [Benincasa hispida])

HSP 1 Score: 229.9 bits (585), Expect = 4.8e-56
Identity = 176/529 (33.27%), Postives = 229/529 (43.29%), Query Frame = 0


Query: 10  DAVMRKILWRLPMKALVRLKCVSKHWYALI-----------TSLQNQNNVFVRRRVKKEE 69
           + VM +IL RLP ++L+R KCV K WYALI            SLQ++  V ++R V K  
Sbjct: 9   EEVMIEILSRLPPESLLRFKCVRKSWYALINDPKFKAKHFSNSLQHK-QVLLKRLVTK-N 68

Query: 70  SGEIETRFSIFQYPFFTDDSC----LGPAFKTS---STTHGCSRGIVCFSNNTDDIFLYN 129
           SG  E  FS  + P   D S     L   F         HG S G++C ++   DIFL N
Sbjct: 69  SGNKENIFSFLKLPLSIDRSVSVSDLDLPFDEDFRFFEIHGHSHGLLCLTDLRKDIFLCN 128

Query: 130 PSTRELRKLPPSILLFPDILAFQSSVSSSPPFMINTTLPWNPSMNYTLPPFQGGVSSSPP 189
           PSTRE  KLPPSILL  +                                          
Sbjct: 129 PSTREFHKLPPSILLLTE------------------------------------------ 188

Query: 190 FINNTFPHFQASVYSSPPFMNNTLPNFQGAPSINNTLPPFQGVYSSLPFMNNTLPPFQGA 249
                                                                       
Sbjct: 189 ------------------------------------------------------------ 248

Query: 250 PSINNTLPPFQGAPSINNSLPPFQASVYPSPPYSQGFYSTPSPIPISPYYNLSFQEDVHS 309
                               PP +   Y                               S
Sbjct: 249 --------------------PPAEPDGY------------------------------DS 308

Query: 310 HTIGVGFGYDHKSGDFKVVRVVDF-----YAHTQDASMPPRAEVYDLGKDGWREIKTPIP 369
            T  VGFGYD KS DFKVVRVVDF     Y H      PPR E+YDL KD WREI+TP+ 
Sbjct: 309 STNAVGFGYDSKSRDFKVVRVVDFVEGPGYFH------PPRVEIYDLSKDRWREIETPVC 368

Query: 370 AKPMQNSSFEIYYQGFYYWWADSFHASEVILWFHFSKEVFGIISMPEGL-SYDKFYTALA 429
                   FE+Y++G YYWWA++   +E+I  F  S+EVFG I +PE        Y +L 
Sbjct: 369 GHVFWAPCFEMYHEGTYYWWAETEGGTEIIQTFDMSEEVFGRILVPESFQGTGDRYRSLG 371

Query: 430 VLNESIVLFNYPCLENERTFDLWKLVKDDDDDHGPEVVSWTKLFTMGPLLGVDRPLVFVS 489
           VLN SIVLF+YP   +ER+FD+W++ KD+        VSW+KL T+GP+ G+++PL+FVS
Sbjct: 429 VLNGSIVLFHYPSRGDERSFDIWEMEKDESGG-----VSWSKLLTIGPVSGIEKPLLFVS 371

Query: 490 SDELLMVDNEGQLILCNIFNTQHCKRLPIKGKPTSYQASLFTKTALSLK 515
           SDELLM  +EGQ+IL NI  TQ  K +P+KG P  +Q ++F K+ +S+K
Sbjct: 489 SDELLMEASEGQVILYNI-RTQQLKEVPVKGHPARFQGTVFVKSLMSVK 371

[Close]

BLAST of Sed0004788.1 vs. NCBI nr
Match: XP_022935692.1 (F-box protein CPR30-like [Cucurbita moschata])

HSP 1 Score: 228.8 bits (582), Expect = 1.1e-55
Identity = 177/530 (33.40%), Postives = 225/530 (42.45%), Query Frame = 0


Query: 10  DAVMRKILWRLPMKALVRLKCVSKHWYALITSLQ----------NQNNVFVRRRVKKEES 69
           + VM +IL RLP ++L+R K V K WYALI + +           Q +V ++R V K  S
Sbjct: 9   EEVMIEILSRLPPESLLRFKTVRKSWYALINNPKFATKHFSNSLKQKHVLLKRLVTK-NS 68

Query: 70  GEIETRFSIFQYPFFTDDSCLGPAFKTS---------STTHGCSRGIVCFSNNTDDIFLY 129
           G+ E  FS  ++P   D S   P +                G S G++C ++   DIFL 
Sbjct: 69  GKKENIFSFLKFPLPLDGSV--PVYDVDLPFDEDFRYFEIRGHSHGLLCLTDLRRDIFLC 128

Query: 130 NPSTRELRKLPPSILLFPDILAFQSSVSSSPPFMINTTLPWNPSMNYTLPPFQGGVSSSP 189
           NP+TRE RKLPPSILL  +                                         
Sbjct: 129 NPATREFRKLPPSILLLTE----------------------------------------- 188

Query: 190 PFINNTFPHFQASVYSSPPFMNNTLPNFQGAPSINNTLPPFQGVYSSLPFMNNTLPPFQG 249
                                                                       
Sbjct: 189 ------------------------------------------------------------ 248

Query: 250 APSINNTLPPFQGAPSINNSLPPFQASVYPSPPYSQGFYSTPSPIPISPYYNLSFQEDVH 309
                                PP +   Y                               
Sbjct: 249 ---------------------PPTEPDGY------------------------------D 308

Query: 310 SHTIGVGFGYDHKSGDFKVVRVVDF-----YAHTQDASMPPRAEVYDLGKDGWREIKTPI 369
           S T  VGFGYD KS DFKVVRVV+F     Y H      PPR E+YDL KD WREI+TPI
Sbjct: 309 SSTNAVGFGYDSKSRDFKVVRVVNFVEGPGYFH------PPRVEIYDLSKDRWREIETPI 368

Query: 370 PAKPMQNSSFEIYYQGFYYWWADSFHASEVILWFHFSKEVFGIISMPEGLSYDK-FYTAL 429
                   SFE+Y++G YYWWAD+    E+I  F  S+EVFG ISMPE     +  Y +L
Sbjct: 369 CGHVFWAPSFEMYHEGTYYWWADTNEGVEIIQSFDMSEEVFGQISMPESFEEKREKYRSL 371

Query: 430 AVLNESIVLFNYPCLENERTFDLWKLVKDDDDDHGPEVVSWTKLFTMGPLLGVDRPLVFV 489
            VLN SIVLF YP   +ER FD+W + KD+        VSW+KL  +GPL G+++PLVFV
Sbjct: 429 GVLNGSIVLFRYPSRGDEREFDIWGMEKDEFGG-----VSWSKLLRIGPLRGIEKPLVFV 371

Query: 490 SSDELLMVDNEGQLILCNIFNTQHCKRLPIKGKPTSYQASLFTKTALSLK 515
           S DELLM  NEGQ++L N   TQ  K LPI G P  +QA+LF K+ +S+K
Sbjct: 489 SFDELLMEANEGQIVLYNA-RTQQLKELPINGHPARFQATLFVKSLVSVK 371

[Close]

BLAST of Sed0004788.1 vs. NCBI nr
Match: XP_008443403.1 (PREDICTED: F-box protein CPR30-like [Cucumis melo] >KAA0053766.1 F-box protein CPR30-like [Cucumis melo var. makuwa])

HSP 1 Score: 224.9 bits (572), Expect = 1.5e-54
Identity = 166/524 (31.68%), Postives = 229/524 (43.70%), Query Frame = 0


Query: 10  DAVMRKILWRLPMKALVRLKCVSKHWYALI-----------TSLQNQNNVFVRRRVKKEE 69
           D V+ +IL RLP ++L+R KCV K WYAL            TSLQ+++   + +R+  ++
Sbjct: 9   DGVIIEILSRLPPESLLRFKCVRKSWYALFNDPKFKAKHFSTSLQHKH--LLLKRLVTKD 68

Query: 70  SGEIETRFSIFQYPFFTDDSC----LGPAFKTS---STTHGCSRGIVCFSNNTDDIFLYN 129
           SG+ E  FSI + P     S     +   F         HG S G++C ++   DIFL N
Sbjct: 69  SGKKENIFSILKLPLSIHSSLSISDIDLPFHEDFRFFEIHGHSHGLLCLTDLRKDIFLCN 128

Query: 130 PSTRELRKLPPSILLFPDILAFQSSVSSSPPFMINTTLPWNPSMNYTLPPFQGGVSSSPP 189
           PSTRE  +LPPSILL P+                                          
Sbjct: 129 PSTREFHQLPPSILLLPE------------------------------------------ 188

Query: 190 FINNTFPHFQASVYSSPPFMNNTLPNFQGAPSINNTLPPFQGVYSSLPFMNNTLPPFQGA 249
                                                                       
Sbjct: 189 ------------------------------------------------------------ 248

Query: 250 PSINNTLPPFQGAPSINNSLPPFQASVYPSPPYSQGFYSTPSPIPISPYYNLSFQEDVHS 309
                                                   PS  P          +D  S
Sbjct: 249 ----------------------------------------PSAEP----------DDYDS 308

Query: 310 HTIGVGFGYDHKSGDFKVVRVVDFYAHTQDASMPPRAEVYDLGKDGWREIKTPIPAKPMQ 369
            T  VGFGYD KS DFKVVRVVDF         PP+ EVYDL K+ WREI+TP+      
Sbjct: 309 STNAVGFGYDSKSRDFKVVRVVDF-VEGPGYFYPPKVEVYDLSKERWREIQTPVSGHVFW 368

Query: 370 NSSFEIYYQGFYYWWADSFHASEVILWFHFSKEVFGIISMPEGL-SYDKFYTALAVLNES 429
              FE++++G YYWWAD+   +E+IL F  S+EVFG I +PE       +Y +L VL+  
Sbjct: 369 APCFEVFHEGTYYWWADADGNTEIILTFDMSEEVFGQIPVPESFQGTGDWYRSLGVLDGR 371

Query: 430 IVLFNYPCLENERTFDLWKLVKDDDDDHGPEVVSWTKLFTMGPLLGVDRPLVFVSSDELL 489
           IVLF+YP   +ER FD+W++ KD+        VSW+K+ T+GP+ G+++PL+F+SS+ELL
Sbjct: 429 IVLFHYPSRGDERRFDMWEMGKDESGG-----VSWSKVLTIGPVSGIEKPLLFISSEELL 371

Query: 490 MVDNEGQLILCNIFNTQHCKRLPIKGKPTSYQASLFTKTALSLK 515
           M  N GQLI+ NI  ++  K +PIKG P  +Q + F K+ LS+K
Sbjct: 489 MEGNGGQLIVYNI-RSEEVKEVPIKGSPGRFQGTAFVKSLLSVK 371

[Close]

BLAST of Sed0004788.1 vs. NCBI nr
Match: TYK25636.1 (F-box protein CPR30-like [Cucumis melo var. makuwa])

HSP 1 Score: 224.9 bits (572), Expect = 1.5e-54
Identity = 166/524 (31.68%), Postives = 229/524 (43.70%), Query Frame = 0


Query: 10  DAVMRKILWRLPMKALVRLKCVSKHWYALI-----------TSLQNQNNVFVRRRVKKEE 69
           D V+ +IL RLP ++L+R KCV K WYAL            TSLQ+++   + +R+  ++
Sbjct: 9   DGVIIEILSRLPPESLLRFKCVRKSWYALFNDPKFKAKHFSTSLQHKH--LLLKRLVTKD 68

Query: 70  SGEIETRFSIFQYPFFTDDSC----LGPAFKTS---STTHGCSRGIVCFSNNTDDIFLYN 129
           SG+ E  FSI + P     S     +   F         HG S G++C ++   DIFL N
Sbjct: 69  SGKKENIFSILKLPLSIHSSLSISDIDLPFHEDFRFFEIHGHSHGLLCLTDLRKDIFLCN 128

Query: 130 PSTRELRKLPPSILLFPDILAFQSSVSSSPPFMINTTLPWNPSMNYTLPPFQGGVSSSPP 189
           PSTRE  +LPPSILL P+                                          
Sbjct: 129 PSTREFHQLPPSILLLPE------------------------------------------ 188

Query: 190 FINNTFPHFQASVYSSPPFMNNTLPNFQGAPSINNTLPPFQGVYSSLPFMNNTLPPFQGA 249
                                                                       
Sbjct: 189 ------------------------------------------------------------ 248

Query: 250 PSINNTLPPFQGAPSINNSLPPFQASVYPSPPYSQGFYSTPSPIPISPYYNLSFQEDVHS 309
                                                   PS  P          +D  S
Sbjct: 249 ----------------------------------------PSAEP----------DDYDS 308

Query: 310 HTIGVGFGYDHKSGDFKVVRVVDFYAHTQDASMPPRAEVYDLGKDGWREIKTPIPAKPMQ 369
            T  VGFGYD KS DFKVVRVVDF         PP+ EVYDL K+ WREI+TP+      
Sbjct: 309 STNAVGFGYDSKSRDFKVVRVVDF-VEGPGYFYPPKVEVYDLSKERWREIQTPVSGHVFW 368

Query: 370 NSSFEIYYQGFYYWWADSFHASEVILWFHFSKEVFGIISMPEGL-SYDKFYTALAVLNES 429
              FE++++G YYWWAD+   +E+IL F  S+EVFG I +PE       +Y +L VL+  
Sbjct: 369 APCFEVFHEGTYYWWADADGNTEIILTFDMSEEVFGQIPVPESFQGTGDWYRSLGVLDGC 371

Query: 430 IVLFNYPCLENERTFDLWKLVKDDDDDHGPEVVSWTKLFTMGPLLGVDRPLVFVSSDELL 489
           IVLF+YP   +ER FD+W++ KD+        VSW+K+ T+GP+ G+++PL+F+SS+ELL
Sbjct: 429 IVLFHYPSRGDERRFDMWEMGKDESGG-----VSWSKVLTIGPVSGIEKPLLFISSEELL 371

Query: 490 MVDNEGQLILCNIFNTQHCKRLPIKGKPTSYQASLFTKTALSLK 515
           M  N GQLI+ NI  ++  K +PIKG P  +Q + F K+ LS+K
Sbjct: 489 MEGNGGQLIVYNI-RSEEVKEVPIKGSPGRFQGTAFVKSLLSVK 371

[Close]

BLAST of Sed0004788.1 vs. NCBI nr
Match: XP_023526117.1 (F-box protein CPR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224.2 bits (570), Expect = 2.6e-54
Identity = 174/530 (32.83%), Postives = 228/530 (43.02%), Query Frame = 0


Query: 10  DAVMRKILWRLPMKALVRLKCVSKHWYALI----------TSLQNQNNVFVRRRVKKEES 69
           + VM +IL RLP ++L+R K V K WYALI          ++   Q +V ++R V K  S
Sbjct: 9   EEVMIEILSRLPPESLLRFKTVRKSWYALIDNPKFATKHFSNSLKQKHVLLKRLVTK-NS 68

Query: 70  GEIETRFSIFQYPFFTDDSCLGPAFKTS---------STTHGCSRGIVCFSNNTDDIFLY 129
           G+ E  FS  ++P   D S   P +                G S G++C ++   DIFL 
Sbjct: 69  GKKENIFSFLKFPLPLDGSV--PVYDVDLPFDEDFRYFEIRGHSHGLLCLTDLRRDIFLC 128

Query: 130 NPSTRELRKLPPSILLFPDILAFQSSVSSSPPFMINTTLPWNPSMNYTLPPFQGGVSSSP 189
           NP+TRE RKLPPSILL                                            
Sbjct: 129 NPATREFRKLPPSILLL------------------------------------------- 188

Query: 190 PFINNTFPHFQASVYSSPPFMNNTLPNFQGAPSINNTLPPFQGVYSSLPFMNNTLPPFQG 249
                                                                       
Sbjct: 189 ------------------------------------------------------------ 248

Query: 250 APSINNTLPPFQGAPSINNSLPPFQASVYPSPPYSQGFYSTPSPIPISPYYNLSFQEDVH 309
                 T PP +                                            +   
Sbjct: 249 ------TKPPTE-------------------------------------------PDGYD 308

Query: 310 SHTIGVGFGYDHKSGDFKVVRVVDF-----YAHTQDASMPPRAEVYDLGKDGWREIKTPI 369
           S T  VGFGYD KS DFKVVRVV+F     Y H       PR E+YDL KD WREI+TPI
Sbjct: 309 SSTNAVGFGYDSKSRDFKVVRVVNFVEGPGYFHL------PRVEIYDLSKDRWREIETPI 368

Query: 370 PAKPMQNSSFEIYYQGFYYWWADSFHASEVILWFHFSKEVFGIISMPEGLSYDK-FYTAL 429
                   SFE+Y++G YYWWAD+    E+I  F  ++EVF  IS+PE     +  Y ++
Sbjct: 369 CGHVFWAPSFEMYHEGTYYWWADTDEGVEIIQSFDMTEEVFRRISVPESFEGKRERYRSM 371

Query: 430 AVLNESIVLFNYPCLENERTFDLWKLVKDDDDDHGPEVVSWTKLFTMGPLLGVDRPLVFV 489
            VLN SIVLF+YP   +ER FD+W++VKD+        VSW+KL T+GPL G+++PLVFV
Sbjct: 429 GVLNGSIVLFHYPSRGDEREFDIWEIVKDEFGG-----VSWSKLLTIGPLGGIEKPLVFV 371

Query: 490 SSDELLMVDNEGQLILCNIFNTQHCKRLPIKGKPTSYQASLFTKTALSLK 515
           SSDELLM  NEG+++L N   TQ  K LPI G P  +QA+LF K+ +S+K
Sbjct: 489 SSDELLMEANEGRMVLYNA-RTQQWKELPINGHPARFQATLFVKSLVSVK 371

[Close]

BLAST of Sed0004788.1 vs. ExPASy Swiss-Prot
Match: Q9SU30 (F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 2.7e-09
Identity = 58/231 (25.11%), Postives = 103/231 (44.59%), Query Frame = 0


Query: 297 GFGYDHKSGDFKVVRVVDFYAHTQD---ASMPPRAEVYDLGKDGWREIKTPIPAKPMQNS 356
           G GYD  S D+KVVR+V F   ++D    S P   +V+ L K+ W+ I++   +  +   
Sbjct: 141 GLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASSIQLLFY 200

Query: 357 SFE--IYYQGFYYWWADSFH----------ASEVILWFHFSKEVFGIISMPEGLSYDK-- 416
            +   +Y +G+     +S H          A  +I+ F  + E F I+  PE ++     
Sbjct: 201 FYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVD 260

Query: 417 FYTALAVLNESIVLFNYPCLENERTFDLWKLVKDDDDDHGPEVVSWTKLFTMGPLLGVD- 476
               + VL+  + L    C  ++   D+W + + +  D      SWTK+FT+     V  
Sbjct: 261 IQMDIGVLDGCLCLM---CNYDQSYVDVWMMKEYNVRD------SWTKVFTVQKPKSVKS 320

Query: 477 ----RPLVFVSSDELLMVDNEGQLILCNIFNTQHCKRLPIKGKPTSYQASL 506
               RPLV+    + ++++     ++     ++    L IK  P+SY A L
Sbjct: 321 FSYMRPLVYSKDKKKVLLELNNTKLVWFDLESKKMSTLRIKDCPSSYSAEL 362

HSP 2 Score: 48.1 bits (113), Expect = 3.4e-04
Identity = 42/133 (31.58%), Postives = 64/133 (48.12%), Query Frame = 0


Query: 3   MATAMDDDAVMRKILWRLPMKALVRLKCVSKHWYALITSLQNQNNVFVRRRVKKEESGEI 62
           MAT   D  ++  I  RLP K LVR + +SK  Y LI    +     + R ++  +   I
Sbjct: 1   MATIPMD--IVNDIFLRLPAKTLVRCRALSKPCYHLIND-PDFIESHLHRVLQTGDHLMI 60

Query: 63  ETRFSIFQYPFFTDD----SCLGPAFKTSSTTH--GCSRGIVCFSNNTDDIFLYNPSTRE 122
             R ++  Y    D     S +    K    T   G S G++  SN+  D+ ++NPSTR+
Sbjct: 61  LLRGALRLYSVDLDSLDSVSDVEHPMKRGGPTEVFGSSNGLIGLSNSPTDLAVFNPSTRQ 120

Query: 123 LRKLPPSILLFPD 130
           + +LPPS +  PD
Sbjct: 121 IHRLPPSSIDLPD 130

[Close]

BLAST of Sed0004788.1 vs. ExPASy Swiss-Prot
Match: Q9LUP5 (F-box/kelch-repeat protein At3g17530 OS=Arabidopsis thaliana OX=3702 GN=At3g17530 PE=2 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 3.6e-06
Identity = 51/196 (26.02%), Postives = 88/196 (44.90%), Query Frame = 0


Query: 296 VGFGYDHKS-GDFKVVRVVDFYAHTQDASMPPRAEVYDLGKDGWREIKTPIPAKPMQNSS 355
           +G+G    S   +K++R   +Y     + M    E+YD   D WR++      + M   S
Sbjct: 145 LGYGNSKSSCHSYKILRSCCYYVDQNLSLMAAEFEIYDFSTDSWRDLGD--ITRDMIVYS 204

Query: 356 FEIYYQGFYYWWADSFHASEVILWFHFSKEVFGIISMPEGLSYDKFYTAL--AVLNESIV 415
             +  +G  YW + S      + +F FSKEVFG + +P   S++  +TA   AV NE I 
Sbjct: 205 SGVSLKGNTYWVSGSKEKGFFMRYFDFSKEVFGRLPLPY-QSFNANHTAALSAVGNEKIA 264

Query: 416 LFNYPCLENERTFDLWKLVKDDDDDHGPEVVSWTKLFTMGPLLGVDRP-LVFVSSDELLM 475
           +     L       +W   K D+     + +SW+           + P LV V+S    +
Sbjct: 265 VLQQKILAMSDEMRIWVTNKIDE----AKDLSWSNFLLTVDYGKFNLPCLVNVTS---FL 324

Query: 476 VDNEGQLILCNIFNTQ 488
           +D E ++ +C+  +T+
Sbjct: 325 LDEENKVAVCSDVDTK 330

[Close]

BLAST of Sed0004788.1 vs. ExPASy Swiss-Prot
Match: Q9LIK3 (Putative F-box protein At3g22940 OS=Arabidopsis thaliana OX=3702 GN=At3g22940 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 4.0e-05
Identity = 40/167 (23.95%), Postives = 72/167 (43.11%), Query Frame = 0


Query: 299 GYDHKSGDFKVVRVVDFYAHTQDASMPPRAEVYDLGKDGWREIKTPIPAKPMQNSSFEIY 358
           GYD+K  + K++R +D+  H    ++    E+YD   D W  +    P   +   +  + 
Sbjct: 143 GYDNKRRNHKILRFIDYEFHYPRDNVVLWYEIYDFESDLWTTLDVTTPHWLINCGNRGVT 202

Query: 359 YQGFYYWWA-----DSFHASEVILWFHFSKEVFGIISMPEGLSYDKFYTALAVLNESIVL 418
            +G  YW A     D F  ++ I+ F F+ E FG + +      D   T   V  E +  
Sbjct: 203 LKGNTYWCAKKRNSDLFLNADHIICFDFTSERFGPLLLLPFSDLDGVVTLACVREEKLAA 262

Query: 419 FNYPCLENERTFDLWKLVKDDDDDHGPEVVSWTKLFTMGPLLGVDRP 461
                + +E   ++W  +K + ++     V W+K  T+   LG + P
Sbjct: 263 L----VCHEDVVEVWITIKIEANE-----VLWSKFLTVNVDLGDEIP 300

[Close]

BLAST of Sed0004788.1 vs. ExPASy Swiss-Prot
Match: Q9FGY4 (F-box protein At5g49610 OS=Arabidopsis thaliana OX=3702 GN=At5g49610 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 7.5e-04
Identity = 44/126 (34.92%), Postives = 60/126 (47.62%), Query Frame = 0


Query: 6   AMDDDAVMRKILWRLPMKALVRLKCVSKHWYAL-----ITSLQNQNNVFVRRRVKKEESG 65
           A+  D V+ +IL RLP+K+L R K V K WY L      TSL NQ +V  +  V      
Sbjct: 7   ALFPDEVILQILARLPVKSLFRFKSVCKSWYRLPSDKYFTSLFNQLSVKEQLLV-----A 66

Query: 66  EIETRFSIFQYPFFTDDSCLGPAF-KTSSTTHGCSRGIVCFSNNTDD--IFLYNPSTREL 124
           E+    S+         S L   F +        S G++C S+  +    ++ NPSTRE 
Sbjct: 67  EVSDSSSLICVDNLRGVSELSLDFVRDRVRIRVSSNGLLCCSSIPEKGVYYVCNPSTREY 126

[Close]

BLAST of Sed0004788.1 vs. ExPASy TrEMBL
Match: A0A6J1F6B1 (F-box protein CPR30-like OS=Cucurbita moschata OX=3662 GN=LOC111442474 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 5.2e-56
Identity = 177/530 (33.40%), Postives = 225/530 (42.45%), Query Frame = 0


Query: 10  DAVMRKILWRLPMKALVRLKCVSKHWYALITSLQ----------NQNNVFVRRRVKKEES 69
           + VM +IL RLP ++L+R K V K WYALI + +           Q +V ++R V K  S
Sbjct: 9   EEVMIEILSRLPPESLLRFKTVRKSWYALINNPKFATKHFSNSLKQKHVLLKRLVTK-NS 68

Query: 70  GEIETRFSIFQYPFFTDDSCLGPAFKTS---------STTHGCSRGIVCFSNNTDDIFLY 129
           G+ E  FS  ++P   D S   P +                G S G++C ++   DIFL 
Sbjct: 69  GKKENIFSFLKFPLPLDGSV--PVYDVDLPFDEDFRYFEIRGHSHGLLCLTDLRRDIFLC 128

Query: 130 NPSTRELRKLPPSILLFPDILAFQSSVSSSPPFMINTTLPWNPSMNYTLPPFQGGVSSSP 189
           NP+TRE RKLPPSILL  +                                         
Sbjct: 129 NPATREFRKLPPSILLLTE----------------------------------------- 188

Query: 190 PFINNTFPHFQASVYSSPPFMNNTLPNFQGAPSINNTLPPFQGVYSSLPFMNNTLPPFQG 249
                                                                       
Sbjct: 189 ------------------------------------------------------------ 248

Query: 250 APSINNTLPPFQGAPSINNSLPPFQASVYPSPPYSQGFYSTPSPIPISPYYNLSFQEDVH 309
                                PP +   Y                               
Sbjct: 249 ---------------------PPTEPDGY------------------------------D 308

Query: 310 SHTIGVGFGYDHKSGDFKVVRVVDF-----YAHTQDASMPPRAEVYDLGKDGWREIKTPI 369
           S T  VGFGYD KS DFKVVRVV+F     Y H      PPR E+YDL KD WREI+TPI
Sbjct: 309 SSTNAVGFGYDSKSRDFKVVRVVNFVEGPGYFH------PPRVEIYDLSKDRWREIETPI 368

Query: 370 PAKPMQNSSFEIYYQGFYYWWADSFHASEVILWFHFSKEVFGIISMPEGLSYDK-FYTAL 429
                   SFE+Y++G YYWWAD+    E+I  F  S+EVFG ISMPE     +  Y +L
Sbjct: 369 CGHVFWAPSFEMYHEGTYYWWADTNEGVEIIQSFDMSEEVFGQISMPESFEEKREKYRSL 371

Query: 430 AVLNESIVLFNYPCLENERTFDLWKLVKDDDDDHGPEVVSWTKLFTMGPLLGVDRPLVFV 489
            VLN SIVLF YP   +ER FD+W + KD+        VSW+KL  +GPL G+++PLVFV
Sbjct: 429 GVLNGSIVLFRYPSRGDEREFDIWGMEKDEFGG-----VSWSKLLRIGPLRGIEKPLVFV 371

Query: 490 SSDELLMVDNEGQLILCNIFNTQHCKRLPIKGKPTSYQASLFTKTALSLK 515
           S DELLM  NEGQ++L N   TQ  K LPI G P  +QA+LF K+ +S+K
Sbjct: 489 SFDELLMEANEGQIVLYNA-RTQQLKELPINGHPARFQATLFVKSLVSVK 371

[Close]

BLAST of Sed0004788.1 vs. ExPASy TrEMBL
Match: A0A5A7UHP3 (F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G001510 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 7.5e-55
Identity = 166/524 (31.68%), Postives = 229/524 (43.70%), Query Frame = 0


Query: 10  DAVMRKILWRLPMKALVRLKCVSKHWYALI-----------TSLQNQNNVFVRRRVKKEE 69
           D V+ +IL RLP ++L+R KCV K WYAL            TSLQ+++   + +R+  ++
Sbjct: 9   DGVIIEILSRLPPESLLRFKCVRKSWYALFNDPKFKAKHFSTSLQHKH--LLLKRLVTKD 68

Query: 70  SGEIETRFSIFQYPFFTDDSC----LGPAFKTS---STTHGCSRGIVCFSNNTDDIFLYN 129
           SG+ E  FSI + P     S     +   F         HG S G++C ++   DIFL N
Sbjct: 69  SGKKENIFSILKLPLSIHSSLSISDIDLPFHEDFRFFEIHGHSHGLLCLTDLRKDIFLCN 128

Query: 130 PSTRELRKLPPSILLFPDILAFQSSVSSSPPFMINTTLPWNPSMNYTLPPFQGGVSSSPP 189
           PSTRE  +LPPSILL P+                                          
Sbjct: 129 PSTREFHQLPPSILLLPE------------------------------------------ 188

Query: 190 FINNTFPHFQASVYSSPPFMNNTLPNFQGAPSINNTLPPFQGVYSSLPFMNNTLPPFQGA 249
                                                                       
Sbjct: 189 ------------------------------------------------------------ 248

Query: 250 PSINNTLPPFQGAPSINNSLPPFQASVYPSPPYSQGFYSTPSPIPISPYYNLSFQEDVHS 309
                                                   PS  P          +D  S
Sbjct: 249 ----------------------------------------PSAEP----------DDYDS 308

Query: 310 HTIGVGFGYDHKSGDFKVVRVVDFYAHTQDASMPPRAEVYDLGKDGWREIKTPIPAKPMQ 369
            T  VGFGYD KS DFKVVRVVDF         PP+ EVYDL K+ WREI+TP+      
Sbjct: 309 STNAVGFGYDSKSRDFKVVRVVDF-VEGPGYFYPPKVEVYDLSKERWREIQTPVSGHVFW 368

Query: 370 NSSFEIYYQGFYYWWADSFHASEVILWFHFSKEVFGIISMPEGL-SYDKFYTALAVLNES 429
              FE++++G YYWWAD+   +E+IL F  S+EVFG I +PE       +Y +L VL+  
Sbjct: 369 APCFEVFHEGTYYWWADADGNTEIILTFDMSEEVFGQIPVPESFQGTGDWYRSLGVLDGR 371

Query: 430 IVLFNYPCLENERTFDLWKLVKDDDDDHGPEVVSWTKLFTMGPLLGVDRPLVFVSSDELL 489
           IVLF+YP   +ER FD+W++ KD+        VSW+K+ T+GP+ G+++PL+F+SS+ELL
Sbjct: 429 IVLFHYPSRGDERRFDMWEMGKDESGG-----VSWSKVLTIGPVSGIEKPLLFISSEELL 371

Query: 490 MVDNEGQLILCNIFNTQHCKRLPIKGKPTSYQASLFTKTALSLK 515
           M  N GQLI+ NI  ++  K +PIKG P  +Q + F K+ LS+K
Sbjct: 489 MEGNGGQLIVYNI-RSEEVKEVPIKGSPGRFQGTAFVKSLLSVK 371

[Close]

BLAST of Sed0004788.1 vs. ExPASy TrEMBL
Match: A0A5D3DPN6 (F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007960 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 7.5e-55
Identity = 166/524 (31.68%), Postives = 229/524 (43.70%), Query Frame = 0


Query: 10  DAVMRKILWRLPMKALVRLKCVSKHWYALI-----------TSLQNQNNVFVRRRVKKEE 69
           D V+ +IL RLP ++L+R KCV K WYAL            TSLQ+++   + +R+  ++
Sbjct: 9   DGVIIEILSRLPPESLLRFKCVRKSWYALFNDPKFKAKHFSTSLQHKH--LLLKRLVTKD 68

Query: 70  SGEIETRFSIFQYPFFTDDSC----LGPAFKTS---STTHGCSRGIVCFSNNTDDIFLYN 129
           SG+ E  FSI + P     S     +   F         HG S G++C ++   DIFL N
Sbjct: 69  SGKKENIFSILKLPLSIHSSLSISDIDLPFHEDFRFFEIHGHSHGLLCLTDLRKDIFLCN 128

Query: 130 PSTRELRKLPPSILLFPDILAFQSSVSSSPPFMINTTLPWNPSMNYTLPPFQGGVSSSPP 189
           PSTRE  +LPPSILL P+                                          
Sbjct: 129 PSTREFHQLPPSILLLPE------------------------------------------ 188

Query: 190 FINNTFPHFQASVYSSPPFMNNTLPNFQGAPSINNTLPPFQGVYSSLPFMNNTLPPFQGA 249
                                                                       
Sbjct: 189 ------------------------------------------------------------ 248

Query: 250 PSINNTLPPFQGAPSINNSLPPFQASVYPSPPYSQGFYSTPSPIPISPYYNLSFQEDVHS 309
                                                   PS  P          +D  S
Sbjct: 249 ----------------------------------------PSAEP----------DDYDS 308

Query: 310 HTIGVGFGYDHKSGDFKVVRVVDFYAHTQDASMPPRAEVYDLGKDGWREIKTPIPAKPMQ 369
            T  VGFGYD KS DFKVVRVVDF         PP+ EVYDL K+ WREI+TP+      
Sbjct: 309 STNAVGFGYDSKSRDFKVVRVVDF-VEGPGYFYPPKVEVYDLSKERWREIQTPVSGHVFW 368

Query: 370 NSSFEIYYQGFYYWWADSFHASEVILWFHFSKEVFGIISMPEGL-SYDKFYTALAVLNES 429
              FE++++G YYWWAD+   +E+IL F  S+EVFG I +PE       +Y +L VL+  
Sbjct: 369 APCFEVFHEGTYYWWADADGNTEIILTFDMSEEVFGQIPVPESFQGTGDWYRSLGVLDGC 371

Query: 430 IVLFNYPCLENERTFDLWKLVKDDDDDHGPEVVSWTKLFTMGPLLGVDRPLVFVSSDELL 489
           IVLF+YP   +ER FD+W++ KD+        VSW+K+ T+GP+ G+++PL+F+SS+ELL
Sbjct: 429 IVLFHYPSRGDERRFDMWEMGKDESGG-----VSWSKVLTIGPVSGIEKPLLFISSEELL 371

Query: 490 MVDNEGQLILCNIFNTQHCKRLPIKGKPTSYQASLFTKTALSLK 515
           M  N GQLI+ NI  ++  K +PIKG P  +Q + F K+ LS+K
Sbjct: 489 MEGNGGQLIVYNI-RSEEVKEVPIKGSPGRFQGTAFVKSLLSVK 371

[Close]

BLAST of Sed0004788.1 vs. ExPASy TrEMBL
Match: A0A1S3B7G6 (F-box protein CPR30-like OS=Cucumis melo OX=3656 GN=LOC103486997 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 7.5e-55
Identity = 166/524 (31.68%), Postives = 229/524 (43.70%), Query Frame = 0


Query: 10  DAVMRKILWRLPMKALVRLKCVSKHWYALI-----------TSLQNQNNVFVRRRVKKEE 69
           D V+ +IL RLP ++L+R KCV K WYAL            TSLQ+++   + +R+  ++
Sbjct: 9   DGVIIEILSRLPPESLLRFKCVRKSWYALFNDPKFKAKHFSTSLQHKH--LLLKRLVTKD 68

Query: 70  SGEIETRFSIFQYPFFTDDSC----LGPAFKTS---STTHGCSRGIVCFSNNTDDIFLYN 129
           SG+ E  FSI + P     S     +   F         HG S G++C ++   DIFL N
Sbjct: 69  SGKKENIFSILKLPLSIHSSLSISDIDLPFHEDFRFFEIHGHSHGLLCLTDLRKDIFLCN 128

Query: 130 PSTRELRKLPPSILLFPDILAFQSSVSSSPPFMINTTLPWNPSMNYTLPPFQGGVSSSPP 189
           PSTRE  +LPPSILL P+                                          
Sbjct: 129 PSTREFHQLPPSILLLPE------------------------------------------ 188

Query: 190 FINNTFPHFQASVYSSPPFMNNTLPNFQGAPSINNTLPPFQGVYSSLPFMNNTLPPFQGA 249
                                                                       
Sbjct: 189 ------------------------------------------------------------ 248

Query: 250 PSINNTLPPFQGAPSINNSLPPFQASVYPSPPYSQGFYSTPSPIPISPYYNLSFQEDVHS 309
                                                   PS  P          +D  S
Sbjct: 249 ----------------------------------------PSAEP----------DDYDS 308

Query: 310 HTIGVGFGYDHKSGDFKVVRVVDFYAHTQDASMPPRAEVYDLGKDGWREIKTPIPAKPMQ 369
            T  VGFGYD KS DFKVVRVVDF         PP+ EVYDL K+ WREI+TP+      
Sbjct: 309 STNAVGFGYDSKSRDFKVVRVVDF-VEGPGYFYPPKVEVYDLSKERWREIQTPVSGHVFW 368

Query: 370 NSSFEIYYQGFYYWWADSFHASEVILWFHFSKEVFGIISMPEGL-SYDKFYTALAVLNES 429
              FE++++G YYWWAD+   +E+IL F  S+EVFG I +PE       +Y +L VL+  
Sbjct: 369 APCFEVFHEGTYYWWADADGNTEIILTFDMSEEVFGQIPVPESFQGTGDWYRSLGVLDGR 371

Query: 430 IVLFNYPCLENERTFDLWKLVKDDDDDHGPEVVSWTKLFTMGPLLGVDRPLVFVSSDELL 489
           IVLF+YP   +ER FD+W++ KD+        VSW+K+ T+GP+ G+++PL+F+SS+ELL
Sbjct: 429 IVLFHYPSRGDERRFDMWEMGKDESGG-----VSWSKVLTIGPVSGIEKPLLFISSEELL 371

Query: 490 MVDNEGQLILCNIFNTQHCKRLPIKGKPTSYQASLFTKTALSLK 515
           M  N GQLI+ NI  ++  K +PIKG P  +Q + F K+ LS+K
Sbjct: 489 MEGNGGQLIVYNI-RSEEVKEVPIKGSPGRFQGTAFVKSLLSVK 371

[Close]

BLAST of Sed0004788.1 vs. ExPASy TrEMBL
Match: A0A6J1J6Y5 (F-box protein CPR1-like OS=Cucurbita maxima OX=3661 GN=LOC111482312 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 4.8e-54
Identity = 173/529 (32.70%), Postives = 225/529 (42.53%), Query Frame = 0


Query: 10  DAVMRKILWRLPMKALVRLKCVSKHWYALI----------TSLQNQNNVFVRRRVKKEES 69
           + VM +IL RLP ++L+R K V K WYALI          ++     +V ++R V K  S
Sbjct: 9   EEVMIEILSRLPPESLLRFKTVRKSWYALIDNPKFATKHFSNSLKHKHVLLKRLVTK-NS 68

Query: 70  GEIETRFSIFQYPFFTDDSCLGPAFKTS---------STTHGCSRGIVCFSNNTDDIFLY 129
           G+ E  FS  ++P   D S   P F                G S G++C ++   DIFL 
Sbjct: 69  GKKENIFSFLKFPLPLDGSV--PVFDVDWPFDEDFRYFEIRGHSHGLLCLTDLRRDIFLC 128

Query: 130 NPSTRELRKLPPSILLFPDILAFQSSVSSSPPFMINTTLPWNPSMNYTLPPFQGGVSSSP 189
           NP+TRE RKLP SILL  +                                         
Sbjct: 129 NPATREFRKLPQSILLLTE----------------------------------------- 188

Query: 190 PFINNTFPHFQASVYSSPPFMNNTLPNFQGAPSINNTLPPFQGVYSSLPFMNNTLPPFQG 249
                                                                       
Sbjct: 189 ------------------------------------------------------------ 248

Query: 250 APSINNTLPPFQGAPSINNSLPPFQASVYPSPPYSQGFYSTPSPIPISPYYNLSFQEDVH 309
                                PP +   Y                               
Sbjct: 249 ---------------------PPTEPDGY------------------------------D 308

Query: 310 SHTIGVGFGYDHKSGDFKVVRVVDF-----YAHTQDASMPPRAEVYDLGKDGWREIKTPI 369
           S T  VGFGYD KS DFKVVRVV+F     Y H      PPRAE+YDL KD WREI+TPI
Sbjct: 309 SSTNAVGFGYDSKSKDFKVVRVVNFVEGPGYFH------PPRAEIYDLSKDRWREIETPI 368

Query: 370 PAKPMQNSSFEIYYQGFYYWWADSFHASEVILWFHFSKEVFGIISMPEGLSYDK-FYTAL 429
                   SFE+Y++G YYWWAD+    E+I  F  S+EVF  I +PE    ++  Y ++
Sbjct: 369 CGHVFWAPSFEMYHEGTYYWWADTDDKEEIIQSFDMSEEVFRRIPVPESFEGERERYRSM 370

Query: 430 AVLNESIVLFNYPCLENERTFDLWKLVKDDDDDHGPEVVSWTKLFTMGPLLGVDRPLVFV 489
            +LN SIVLF+YP   +ER FD+W + KD+        VSW+KL T+GPL G+++PLVFV
Sbjct: 429 GILNGSIVLFHYPSRGDEREFDIWGMEKDEFGG-----VSWSKLLTIGPLRGIEKPLVFV 370

Query: 490 SSDELLMVDNEGQLILCNIFNTQHCKRLPIKGKPTSYQASLFTKTALSL 514
           SSDELLM  NEGQ++L N    Q  K LPIKG P  +QA+LF K+ +S+
Sbjct: 489 SSDELLMEANEGQIVLYNA-RIQQLKELPIKGHPARFQATLFVKSLVSV 370

[Close]

BLAST of Sed0004788.1 vs. TAIR 10
Match: AT4G12560.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 65.1 bits (157), Expect = 1.9e-10
Identity = 58/231 (25.11%), Postives = 103/231 (44.59%), Query Frame = 0


Query: 297 GFGYDHKSGDFKVVRVVDFYAHTQD---ASMPPRAEVYDLGKDGWREIKTPIPAKPMQNS 356
           G GYD  S D+KVVR+V F   ++D    S P   +V+ L K+ W+ I++   +  +   
Sbjct: 141 GLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASSIQLLFY 200

Query: 357 SFE--IYYQGFYYWWADSFH----------ASEVILWFHFSKEVFGIISMPEGLSYDK-- 416
            +   +Y +G+     +S H          A  +I+ F  + E F I+  PE ++     
Sbjct: 201 FYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVD 260

Query: 417 FYTALAVLNESIVLFNYPCLENERTFDLWKLVKDDDDDHGPEVVSWTKLFTMGPLLGVD- 476
               + VL+  + L    C  ++   D+W + + +  D      SWTK+FT+     V  
Sbjct: 261 IQMDIGVLDGCLCLM---CNYDQSYVDVWMMKEYNVRD------SWTKVFTVQKPKSVKS 320

Query: 477 ----RPLVFVSSDELLMVDNEGQLILCNIFNTQHCKRLPIKGKPTSYQASL 506
               RPLV+    + ++++     ++     ++    L IK  P+SY A L
Sbjct: 321 FSYMRPLVYSKDKKKVLLELNNTKLVWFDLESKKMSTLRIKDCPSSYSAEL 362

HSP 2 Score: 48.1 bits (113), Expect = 2.4e-05
Identity = 42/133 (31.58%), Postives = 64/133 (48.12%), Query Frame = 0


Query: 3   MATAMDDDAVMRKILWRLPMKALVRLKCVSKHWYALITSLQNQNNVFVRRRVKKEESGEI 62
           MAT   D  ++  I  RLP K LVR + +SK  Y LI    +     + R ++  +   I
Sbjct: 1   MATIPMD--IVNDIFLRLPAKTLVRCRALSKPCYHLIND-PDFIESHLHRVLQTGDHLMI 60

Query: 63  ETRFSIFQYPFFTDD----SCLGPAFKTSSTTH--GCSRGIVCFSNNTDDIFLYNPSTRE 122
             R ++  Y    D     S +    K    T   G S G++  SN+  D+ ++NPSTR+
Sbjct: 61  LLRGALRLYSVDLDSLDSVSDVEHPMKRGGPTEVFGSSNGLIGLSNSPTDLAVFNPSTRQ 120

Query: 123 LRKLPPSILLFPD 130
           + +LPPS +  PD
Sbjct: 121 IHRLPPSSIDLPD 130

[Close]

BLAST of Sed0004788.1 vs. TAIR 10
Match: AT4G12560.2 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 65.1 bits (157), Expect = 1.9e-10
Identity = 58/231 (25.11%), Postives = 103/231 (44.59%), Query Frame = 0


Query: 297 GFGYDHKSGDFKVVRVVDFYAHTQD---ASMPPRAEVYDLGKDGWREIKTPIPAKPMQNS 356
           G GYD  S D+KVVR+V F   ++D    S P   +V+ L K+ W+ I++   +  +   
Sbjct: 141 GLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASSIQLLFY 200

Query: 357 SFE--IYYQGFYYWWADSFH----------ASEVILWFHFSKEVFGIISMPEGLSYDK-- 416
            +   +Y +G+     +S H          A  +I+ F  + E F I+  PE ++     
Sbjct: 201 FYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVD 260

Query: 417 FYTALAVLNESIVLFNYPCLENERTFDLWKLVKDDDDDHGPEVVSWTKLFTMGPLLGVD- 476
               + VL+  + L    C  ++   D+W + + +  D      SWTK+FT+     V  
Sbjct: 261 IQMDIGVLDGCLCLM---CNYDQSYVDVWMMKEYNVRD------SWTKVFTVQKPKSVKS 320

Query: 477 ----RPLVFVSSDELLMVDNEGQLILCNIFNTQHCKRLPIKGKPTSYQASL 506
               RPLV+    + ++++     ++     ++    L IK  P+SY A L
Sbjct: 321 FSYMRPLVYSKDKKKVLLELNNTKLVWFDLESKKMSTLRIKDCPSSYSAEL 362

HSP 2 Score: 48.1 bits (113), Expect = 2.4e-05
Identity = 42/133 (31.58%), Postives = 64/133 (48.12%), Query Frame = 0


Query: 3   MATAMDDDAVMRKILWRLPMKALVRLKCVSKHWYALITSLQNQNNVFVRRRVKKEESGEI 62
           MAT   D  ++  I  RLP K LVR + +SK  Y LI    +     + R ++  +   I
Sbjct: 1   MATIPMD--IVNDIFLRLPAKTLVRCRALSKPCYHLIND-PDFIESHLHRVLQTGDHLMI 60

Query: 63  ETRFSIFQYPFFTDD----SCLGPAFKTSSTTH--GCSRGIVCFSNNTDDIFLYNPSTRE 122
             R ++  Y    D     S +    K    T   G S G++  SN+  D+ ++NPSTR+
Sbjct: 61  LLRGALRLYSVDLDSLDSVSDVEHPMKRGGPTEVFGSSNGLIGLSNSPTDLAVFNPSTRQ 120

Query: 123 LRKLPPSILLFPD 130
           + +LPPS +  PD
Sbjct: 121 IHRLPPSSIDLPD 130

[Close]

BLAST of Sed0004788.1 vs. TAIR 10
Match: AT3G17530.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 54.7 bits (130), Expect = 2.6e-07
Identity = 51/196 (26.02%), Postives = 88/196 (44.90%), Query Frame = 0


Query: 296 VGFGYDHKS-GDFKVVRVVDFYAHTQDASMPPRAEVYDLGKDGWREIKTPIPAKPMQNSS 355
           +G+G    S   +K++R   +Y     + M    E+YD   D WR++      + M   S
Sbjct: 145 LGYGNSKSSCHSYKILRSCCYYVDQNLSLMAAEFEIYDFSTDSWRDLGD--ITRDMIVYS 204

Query: 356 FEIYYQGFYYWWADSFHASEVILWFHFSKEVFGIISMPEGLSYDKFYTAL--AVLNESIV 415
             +  +G  YW + S      + +F FSKEVFG + +P   S++  +TA   AV NE I 
Sbjct: 205 SGVSLKGNTYWVSGSKEKGFFMRYFDFSKEVFGRLPLPY-QSFNANHTAALSAVGNEKIA 264

Query: 416 LFNYPCLENERTFDLWKLVKDDDDDHGPEVVSWTKLFTMGPLLGVDRP-LVFVSSDELLM 475
           +     L       +W   K D+     + +SW+           + P LV V+S    +
Sbjct: 265 VLQQKILAMSDEMRIWVTNKIDE----AKDLSWSNFLLTVDYGKFNLPCLVNVTS---FL 324

Query: 476 VDNEGQLILCNIFNTQ 488
           +D E ++ +C+  +T+
Sbjct: 325 LDEENKVAVCSDVDTK 330

[Close]

BLAST of Sed0004788.1 vs. TAIR 10
Match: AT4G08380.1 (Proline-rich extensin-like family protein )

HSP 1 Score: 53.1 bits (126), Expect = 7.5e-07
Identity = 56/199 (28.14%), Postives = 90/199 (45.23%), Query Frame = 0


Query: 112 PSTRELRKLPPSILLFPDILAFQSS----VSSSPPFMINTTLPW----NPSMNYTLPPFQ 171
           P +  + K PP +   P   A+       V  SPP++ ++  P+     P   Y+ PP+ 
Sbjct: 99  PPSPYVYKSPPYVYSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYVYSSPPPYAYSPPPYA 158

Query: 172 GG------VSSSPPFINNTFPHFQAS------VYSSPPFMNNTLPNF-QGAPSINNTLPP 231
                   V  SPP++ ++ P +  S      VY SPP++ ++ P +    P    + PP
Sbjct: 159 YSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPYAYSPPP 218

Query: 232 FQGVYSSLPFMNNTLPPFQGAPSINNTLPP----FQGAPSINNSLPPFQAS------VYP 280
              VY S P++ ++ PP+  +P      PP    ++  P + +S PP+  S      VY 
Sbjct: 219 SPYVYKSPPYVYSSPPPYAYSP------PPSPYVYKSPPYVYSSPPPYAYSPPPSPYVYK 278

[Close]

BLAST of Sed0004788.1 vs. TAIR 10
Match: AT3G22940.1 (F-box associated ubiquitination effector family protein )

HSP 1 Score: 51.2 bits (121), Expect = 2.8e-06
Identity = 40/167 (23.95%), Postives = 72/167 (43.11%), Query Frame = 0


Query: 299 GYDHKSGDFKVVRVVDFYAHTQDASMPPRAEVYDLGKDGWREIKTPIPAKPMQNSSFEIY 358
           GYD+K  + K++R +D+  H    ++    E+YD   D W  +    P   +   +  + 
Sbjct: 143 GYDNKRRNHKILRFIDYEFHYPRDNVVLWYEIYDFESDLWTTLDVTTPHWLINCGNRGVT 202

Query: 359 YQGFYYWWA-----DSFHASEVILWFHFSKEVFGIISMPEGLSYDKFYTALAVLNESIVL 418
            +G  YW A     D F  ++ I+ F F+ E FG + +      D   T   V  E +  
Sbjct: 203 LKGNTYWCAKKRNSDLFLNADHIICFDFTSERFGPLLLLPFSDLDGVVTLACVREEKLAA 262

Query: 419 FNYPCLENERTFDLWKLVKDDDDDHGPEVVSWTKLFTMGPLLGVDRP 461
                + +E   ++W  +K + ++     V W+K  T+   LG + P
Sbjct: 263 L----VCHEDVVEVWITIKIEANE-----VLWSKFLTVNVDLGDEIP 300

The following BLAST results are available for this feature:

BLAST of Sed0004788.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906036.1	4.8e-56	33.27	F-box protein CPR1-like [Benincasa hispida]	[more]
XP_022935692.1	1.1e-55	33.40	F-box protein CPR30-like [Cucurbita moschata]	[more]
XP_008443403.1	1.5e-54	31.68	PREDICTED: F-box protein CPR30-like [Cucumis melo] >KAA0053766.1 F-box protein C...	[more]
TYK25636.1	1.5e-54	31.68	F-box protein CPR30-like [Cucumis melo var. makuwa]	[more]
XP_023526117.1	2.6e-54	32.83	F-box protein CPR1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0004788.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SU30	2.7e-09	25.11	F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2	[more]
Q9LUP5	3.6e-06	26.02	F-box/kelch-repeat protein At3g17530 OS=Arabidopsis thaliana OX=3702 GN=At3g1753...	[more]
Q9LIK3	4.0e-05	23.95	Putative F-box protein At3g22940 OS=Arabidopsis thaliana OX=3702 GN=At3g22940 PE...	[more]
Q9FGY4	7.5e-04	34.92	F-box protein At5g49610 OS=Arabidopsis thaliana OX=3702 GN=At5g49610 PE=1 SV=1	[more]

BLAST of Sed0004788.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F6B1	5.2e-56	33.40	F-box protein CPR30-like OS=Cucurbita moschata OX=3662 GN=LOC111442474 PE=4 SV=1	[more]
A0A5A7UHP3	7.5e-55	31.68	F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5D3DPN6	7.5e-55	31.68	F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3B7G6	7.5e-55	31.68	F-box protein CPR30-like OS=Cucumis melo OX=3656 GN=LOC103486997 PE=4 SV=1	[more]
A0A6J1J6Y5	4.8e-54	32.70	F-box protein CPR1-like OS=Cucurbita maxima OX=3661 GN=LOC111482312 PE=4 SV=1	[more]

BLAST of Sed0004788.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12560.1	1.9e-10	25.11	F-box and associated interaction domains-containing protein	[more]
AT4G12560.2	1.9e-10	25.11	F-box and associated interaction domains-containing protein	[more]
AT3G17530.1	2.6e-07	26.02	F-box and associated interaction domains-containing protein	[more]
AT4G08380.1	7.5e-07	28.14	Proline-rich extensin-like family protein	[more]
AT3G22940.1	2.8e-06	23.95	F-box associated ubiquitination effector family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 10..42 e-value: 2.3E-4 score: 20.9
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 294..456 e-value: 3.3E-21 score: 73.7
IPR006527	F-box associated domain, type 1	PFAM	PF07734	FBA_1	coord: 360..488 e-value: 1.4E-6 score: 28.3
None	No IPR available	PANTHER	PTHR47993	OS09G0372900 PROTEIN-RELATED	coord: 284..513
None	No IPR available	PANTHER	PTHR47993:SF44	F-BOX PROTEIN CPR30-LIKE ISOFORM X1	coord: 284..513
None	No IPR available	PANTHER	PTHR47993:SF44	F-BOX PROTEIN CPR30-LIKE ISOFORM X1	coord: 16..118
None	No IPR available	PANTHER	PTHR47993	OS09G0372900 PROTEIN-RELATED	coord: 16..118
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 12..56

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0004788	Sed0004788	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0004788.1-exon	Sed0004788.1-exon-LG04:9833649..9834195	exon
Sed0004788.1-exon	Sed0004788.1-exon-LG04:9834286..9835323	exon
Sed0004788.1-exon	Sed0004788.1-exon-LG04:9835566..9835961	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0004788.1-cds	Sed0004788.1-cds-LG04:9833649..9834195	CDS
Sed0004788.1-cds	Sed0004788.1-cds-LG04:9834286..9835283	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0004788.1-three_prime_utr	Sed0004788.1-three_prime_utr-LG04:9835284..9835323	three_prime_UTR
Sed0004788.1-three_prime_utr	Sed0004788.1-three_prime_utr-LG04:9835566..9835961	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0004788.1	Sed0004788.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding