Sed0004450.2 (mRNA) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCAACAACAAATGGGAATCATGCAAATACAGCATTGATAAAAAACAAAGCTGGACGGATTTTGTCTTTACCTAAAAATGCCCAAATAACAGATTAAAAATCAATTTCAAACCTAATTTCATTTCACTCATTCATTAGCAGAGAGCTCTCACAATGGAGAAAAGTTACTCCATGGACGAAATTCAGCACAAATTCGTGAAAGTCCAAGCAGGATTGCAGATCCACGTCGCCGAGATCGGAACCGGTGATCAGTCAATCTGTTCTCTCGCCGGATTCCGGTGACATTCTCTGATCTTCTTCTTCTTCTTGTTGTTGTGATGTTTTCAGGTTCGAATGCGGTGGTTTTTCTGCACGGATTTCCGGAGATTTGGTACTCATGGCGGCACCAGATGATTGCGGTGGCCAACGCCGGATTCCGAGCAATCGCTTTCGATTACAGAGGCTATGGACTCTCCGATCCGCCGCCGGAGCTTTCCAAGGCTACATTTAGCGATATTATTGCCGATTTGCTTCGAATTCTTGACCATTTCTGTATCCCTAAGGTACTGTTTCTCATTTTGTTGAGATTTGAAGCAGAGACAGCTGTTACTGAGTGATCTGGGTTCAATTTTTGTGTGTTTCCTGCCAAATGAACCGATCTTCATTTGGCTCGATTCGGTTTTATTTTGGTTTCGGTTTTGATTTCATATACATTTTTTTCAATTTTTTATACTATTTTTAATTTAGTTTTTTTTTTAAATGTTTTTTTATCAGCTAAAAACAACAATCGTGGTGAATAGTAATTGTGCTTACTATTTTAAATCTAAAATTGTTGTTCCATCAAGTTAAATACCAATATATTTTGTTTTCTTTAAAAATTTTATATTTAGTTTAGAGCATAATTTTTAAAATAATTCATCTATAATACATTAATTTTTATCACGTGATAGAATTCAATTTAAATTTTTATTATTGAAAGGAAACTCCAGCAATAGAATAAATCTATTATTAATTGAATTCTATCACTAAAAAACTCAATTAGTGATATAATTTAATTTGAATTTTTTGATATAAATGAATTAATTTTGATTTTGTGCTATAAATGAAAATACTTTCAATTTTTTCGTTATACATACAAAATCGCCAATTTTGAAAGTATTAATGTTATTATTTTATTTTAATAATATACATGCAAAATCTTTTATTTTTTTGGATTTTGATTTTGATTTTGATTTCATCAGAATTAGTTTTTTTTTTCAATTTTTTATACTATTTTTAATTTAATTTTTTAAAAAATATTTTTTTATCAGCTGAAAACAACATCCTGGTGAATAGTACTTTTTCTTACTATTTTAAATGTAAATTTGTTGTTCCGTCGAATTAAATACCAATATATTTTTTTTTTCTTTAAAATTTTTATATTTATTTTGGTTTTTATTTGGTTCTTCCATCGACCAATATGTTTCGATTTTTTTTAAATATCAAATGAATTGATTTAATTTTATTCTAAACAATCAAGAGGAGTTGTTGATGGAAGAAACTAAACCAGAATAATTGATATGAACTGCTTATAAGTTTTCTAAATCCGCGATTCAAAGTTCTAAACTTCAAACCCATCGCTCCATCTCGAACAGTGTTTGAGGGGTTTTCTTAAAATATATATACAATTGGTTAAGTTACCAAATCTAGCCCACTTTCCTGCCTGTCTATTTCATCTTTTAAATTTTAAAAGTATTAAATGTTATTATTTTTTTTAATAATATACGGGATGAGGAATCTAACCTTTATTAATTGATGGCGGTAATATAAGATGTTGGTTGAACTATGTTTATTTTGACGTATTAAACTTATTACATTTTTGGAGATTTTTCATGAATCATAAAAGATGGAAAAAGAATTCTATAGATGTCAAAATATTTTAGAAAGTTCAAAATTTGAAAAAATAGATTAATCAAATTAAATTTGATGACTTCAATCTGCCCTAGATTTAAGGTAGATGATCCAATAATGTGAAATTGATGGCTTCAATTAAATTAAACTGATTAAAAACAAGATGTCAAAAAAATAAATTGGATTGATAAGAACCTTTGGAAATTGATAATTATATAAACTAGGAATGGTAGTATTTGGTATCTAAAGGGAAAAAGTTGTTGCAAATCCTTTTTTTGTGTTGGCTTAGATGGTTTTTCTTACAGTAAGGGGAAAGTAAAAAATGTTGTAACATTATTAATGTGTTGATAGGTGTTTTTGGTGGGGAAAGATTTTGGAGCATTGCCAGCTTATCAATTTGCTATTAAACACCCAGAAAGGTCATTGGGAGTTGTAACAATGGGTGTGCCATTCAGACCTCTCCAACTTAGAAGTAGGTACAAAGACCACCTCCCTGAAGGCTTCTACATTTCAAGATGGCAGGTATACACTCCATCAGCAGTAAATTTATATGATTCACTAACGATTTGTTAGCTACAACGGAAAACAGAAAGAAAAATCATCTGATTAAAGAAAGTAATAAATACATAATAGGTTAAGGAGATAAGGTTTTAAAAGGATTCATATATTACATCCCTTATAAACTCGATTCAAGTTAGTTTACATGCACTTTAACTATTTTCATGAGACAAATTATATGATCCTACAATATTTTATTGTCAAGAAAATCTGTAAGAATTAGTTTATAAGTAGGTGGGCACCATGAATTGAATTTATCATCTCTTATATCTTCAAAATTCTCTTTTAACTATTAGGCCAACCCATGATAGTATTGTTAGGATTGACCTTCAGGGTAATTGGGGAATAATAGAGGAGTATATGGGCAAATAGTTATGGAGTTAGTTAGACTTTTGGTTATTAATAGAGAGGTTGTTTGAGGGAAAGGGAGACATATTTTGAGTGACTACACTGTGAGCTTTAAGACATGATTCTCTGGAGAGAAAGGGAGATTCCAAGTCCTATTCAAACTTGGGTTATCTTGTAGCAATTCGAATCCTAGCATGTTCCGATGAAAACTTCGTTGCGATACATTGAACATTTTCTTGGATTTGTCTGTACAGTACAGAACAGAGCCTGATTTTGGTTTCTTTAAGTTTATTTGTATGGTTTTGTTGTGTTAGGAACCTGGACGAGCAGAGGCTGATTTTGGTCGTTTTGATGTAAAAACGGTTATTAGAAATATTTACATCCTCTTCTCTAGAAGCGAAATCCCAATAGCCAAAGAAAACCAGGAGATAATGGACATAGTGGACTCTTCAACTCCTCTTCCCCCTTGGTTTACAGAGGAAGATCTAGCTGCTTATGCAGATCTCTATAAGAAATCTGGACTTGTCACTGCATTGCAAGTTCCTTATAGGTAAATCCCTTTCAATCTTTTTGTTTATTGCTTTTCGATTATCGTGCAAGCGAGTGATTGAGCTTCTCAACCTTAGTGTTGAATCATGTTAAGTTACCAAAAACCTAAACCTTAAATTAATAGATTGAGGTAAATTCCCACCCCTCACCTGTGAGCTTGTAAATTTGAAAATTGTCTACAAATTGAAATCAATTTTAATGGAAGAAGAAACGACTTCATAAGAGTTTGAACACAAGGCCTCCAACTAAAATATAAAATTGAATCATGTTAAAAAAAAAATCAATCAACAGTTAAGTTTAGGCCTTAGAAGATTTAAGAATGTATTAGAGGCATATGGACAATTAGTTAGGTAGCTTAGTTCTAAATAAGAGTGGTTAGATGATTAAGAGAGGACATCTTGAAATTGAGTGAAGGTGGTTTCGGGCTTGACCGATCTCAAAAGTTAAGGATGGTTCAAGTACTTCAAATCACTTGGCTTATTTTGTATGTTTATTCTGATCAACCCAAAAAGCTTAAGTTAGTAGGTTAATGTTTTTTTTTTTTTTTTTTTATAAATTGGAATCAAAGTTTTGCCCCATTATATACTCGGTTAGCATTTGAGTCTGTCCCAAGACTTGATTCCAAAGACAACAATAAATTATACGATTAAAATTACTCGAAGGTTTCATTATATCAACTAACACTTAAATGGTTCAATGATGATCGATCTATATTTGATAATATGGATGAATGTATATGATAGGTCATTGATCCATGAAGATCCAGAAGTAAAAGCCCCAAAAGTTGAAGTTCCTGCACTTCTGATAGTGGGTGAAAAAGATTATTTCTTGAAATTTCCAGGAATTAATGAATATATGCAAAGTGAAAAGATGAAAGAGTATGTTCCCAAATTGGAGATTGCCAATCTACCAGAAGGATCTCATTTTGTTCAAGAGCAATTCCCTGAAGAAGTTAATGAATTGCTAATCAATTTCCTTGCCAAGCATGCATGATTTAGACTTATTCAGCGCTGTGGTTGAATCTAAATAAACATTTGGCTAGTTTTTAAAAAGAGTTTTTAAAATAAATATGTCTAGATGGCTCTTTGTGTGTTATGTGTTCTTGCATACGATTGATAGGAAGTAGGCC GGCAACAACAAATGGGAATCATGCAAATACAGCATTGATAAAAAACAAAGCTGGACGGATTTTGTCTTTACCTAAAAATGCCCAAATAACAGATTAAAAATCAATTTCAAACCTAATTTCATTTCACTCATTCATTAGCAGAGAGCTCTCACAATGGAGAAAAGTTACTCCATGGACGAAATTCAGCACAAATTCGTGAAAGTCCAAGCAGGATTGCAGATCCACGTCGCCGAGATCGGAACCGGTGATCAGTCAATCTGTTCTCTCGCCGGATTCCGGTGACATTCTCTGATCTTCTTCTTCTTCTTGTTGTTGTGATGTTTTCAGGTTCGAATGCGGTGGTTTTTCTGCACGGATTTCCGGAGATTTGGTACTCATGGCGGCACCAGATGATTGCGGTGGCCAACGCCGGATTCCGAGCAATCGCTTTCGATTACAGAGGCTATGGACTCTCCGATCCGCCGCCGGAGCTTTCCAAGGCTACATTTAGCGATATTATTGCCGATTTGCTTCGAATTCTTGACCATTTCTGTATCCCTAAGGTGTTTTTGGTGGGGAAAGATTTTGGAGCATTGCCAGCTTATCAATTTGCTATTAAACACCCAGAAAGGTCATTGGGAGTTGTAACAATGGGTGTGCCATTCAGACCTCTCCAACTTAGAAGTAGGTACAAAGACCACCTCCCTGAAGGCTTCTACATTTCAAGATGGCAGGAACCTGGACGAGCAGAGGCTGATTTTGGTCGTTTTGATGTAAAAACGGTTATTAGAAATATTTACATCCTCTTCTCTAGAAGCGAAATCCCAATAGCCAAAGAAAACCAGGAGATAATGGACATAGTGGACTCTTCAACTCCTCTTCCCCCTTGGTTTACAGAGGAAGATCTAGCTGCTTATGCAGATCTCTATAAGAAATCTGGACTTGTCACTGCATTGCAAGTTCCTTATAGGTCATTGATCCATGAAGATCCAGAAGTAAAAGCCCCAAAAGTTGAAGTTCCTGCACTTCTGATAGTGGGTGAAAAAGATTATTTCTTGAAATTTCCAGGAATTAATGAATATATGCAAAGTGAAAAGATGAAAGAGTATGTTCCCAAATTGGAGATTGCCAATCTACCAGAAGGATCTCATTTTGTTCAAGAGCAATTCCCTGAAGAAGTTAATGAATTGCTAATCAATTTCCTTGCCAAGCATGCATGATTTAGACTTATTCAGCGCTGTGGTTGAATCTAAATAAACATTTGGCTAGTTTTTAAAAAGAGTTTTTAAAATAAATATGTCTAGATGGCTCTTTGTGTGTTATGTGTTCTTGCATACGATTGATAGGAAGTAGGCC ATGTTTTCAGGTTCGAATGCGGTGGTTTTTCTGCACGGATTTCCGGAGATTTGGTACTCATGGCGGCACCAGATGATTGCGGTGGCCAACGCCGGATTCCGAGCAATCGCTTTCGATTACAGAGGCTATGGACTCTCCGATCCGCCGCCGGAGCTTTCCAAGGCTACATTTAGCGATATTATTGCCGATTTGCTTCGAATTCTTGACCATTTCTGTATCCCTAAGGTGTTTTTGGTGGGGAAAGATTTTGGAGCATTGCCAGCTTATCAATTTGCTATTAAACACCCAGAAAGGTCATTGGGAGTTGTAACAATGGGTGTGCCATTCAGACCTCTCCAACTTAGAAGTAGGTACAAAGACCACCTCCCTGAAGGCTTCTACATTTCAAGATGGCAGGAACCTGGACGAGCAGAGGCTGATTTTGGTCGTTTTGATGTAAAAACGGTTATTAGAAATATTTACATCCTCTTCTCTAGAAGCGAAATCCCAATAGCCAAAGAAAACCAGGAGATAATGGACATAGTGGACTCTTCAACTCCTCTTCCCCCTTGGTTTACAGAGGAAGATCTAGCTGCTTATGCAGATCTCTATAAGAAATCTGGACTTGTCACTGCATTGCAAGTTCCTTATAGGTCATTGATCCATGAAGATCCAGAAGTAAAAGCCCCAAAAGTTGAAGTTCCTGCACTTCTGATAGTGGGTGAAAAAGATTATTTCTTGAAATTTCCAGGAATTAATGAATATATGCAAAGTGAAAAGATGAAAGAGTATGTTCCCAAATTGGAGATTGCCAATCTACCAGAAGGATCTCATTTTGTTCAAGAGCAATTCCCTGAAGAAGTTAATGAATTGCTAATCAATTTCCTTGCCAAGCATGCATGA MFSGSNAVVFLHGFPEIWYSWRHQMIAVANAGFRAIAFDYRGYGLSDPPPELSKATFSDIIADLLRILDHFCIPKVFLVGKDFGALPAYQFAIKHPERSLGVVTMGVPFRPLQLRSRYKDHLPEGFYISRWQEPGRAEADFGRFDVKTVIRNIYILFSRSEIPIAKENQEIMDIVDSSTPLPPWFTEEDLAAYADLYKKSGLVTALQVPYRSLIHEDPEVKAPKVEVPALLIVGEKDYFLKFPGINEYMQSEKMKEYVPKLEIANLPEGSHFVQEQFPEEVNELLINFLAKHA Homology
BLAST of Sed0004450.2 vs. NCBI nr
Match: XP_038880906.1 (bifunctional epoxide hydrolase 2-like [Benincasa hispida]) HSP 1 Score: 483.4 bits (1243), Expect = 1.4e-132 Identity = 232/290 (80.00%), Postives = 261/290 (90.00%), Query Frame = 0
BLAST of Sed0004450.2 vs. NCBI nr
Match: XP_022142376.1 (bifunctional epoxide hydrolase 2-like [Momordica charantia]) HSP 1 Score: 475.3 bits (1222), Expect = 3.7e-130 Identity = 227/290 (78.28%), Postives = 259/290 (89.31%), Query Frame = 0
BLAST of Sed0004450.2 vs. NCBI nr
Match: XP_004134721.1 (bifunctional epoxide hydrolase 2 [Cucumis sativus] >KGN49209.1 hypothetical protein Csa_003299 [Cucumis sativus]) HSP 1 Score: 474.2 bits (1219), Expect = 8.3e-130 Identity = 225/290 (77.59%), Postives = 253/290 (87.24%), Query Frame = 0
BLAST of Sed0004450.2 vs. NCBI nr
Match: XP_008439886.1 (PREDICTED: bifunctional epoxide hydrolase 2-like [Cucumis melo] >KAA0052704.1 bifunctional epoxide hydrolase 2-like [Cucumis melo var. makuwa] >TYK13120.1 bifunctional epoxide hydrolase 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 472.2 bits (1214), Expect = 3.2e-129 Identity = 224/290 (77.24%), Postives = 253/290 (87.24%), Query Frame = 0
BLAST of Sed0004450.2 vs. NCBI nr
Match: XP_023544287.1 (bifunctional epoxide hydrolase 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 465.7 bits (1197), Expect = 3.0e-127 Identity = 222/290 (76.55%), Postives = 256/290 (88.28%), Query Frame = 0
BLAST of Sed0004450.2 vs. ExPASy Swiss-Prot
Match: P34913 (Bifunctional epoxide hydrolase 2 OS=Homo sapiens OX=9606 GN=EPHX2 PE=1 SV=2) HSP 1 Score: 140.2 bits (352), Expect = 3.7e-32 Identity = 87/295 (29.49%), Postives = 148/295 (50.17%), Query Frame = 0
BLAST of Sed0004450.2 vs. ExPASy Swiss-Prot
Match: P34914 (Bifunctional epoxide hydrolase 2 OS=Mus musculus OX=10090 GN=Ephx2 PE=1 SV=2) HSP 1 Score: 134.8 bits (338), Expect = 1.6e-30 Identity = 87/293 (29.69%), Postives = 147/293 (50.17%), Query Frame = 0
BLAST of Sed0004450.2 vs. ExPASy Swiss-Prot
Match: P80299 (Bifunctional epoxide hydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ephx2 PE=1 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.7e-30 Identity = 88/295 (29.83%), Postives = 141/295 (47.80%), Query Frame = 0
BLAST of Sed0004450.2 vs. ExPASy Swiss-Prot
Match: Q6Q2C2 (Bifunctional epoxide hydrolase 2 OS=Sus scrofa OX=9823 GN=EPHX2 PE=2 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 6.0e-30 Identity = 86/297 (28.96%), Postives = 143/297 (48.15%), Query Frame = 0
BLAST of Sed0004450.2 vs. ExPASy Swiss-Prot
Match: P95276 (Epoxide hydrolase B OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT1988 PE=1 SV=2) HSP 1 Score: 126.7 bits (317), Expect = 4.3e-28 Identity = 92/326 (28.22%), Postives = 148/326 (45.40%), Query Frame = 0
BLAST of Sed0004450.2 vs. ExPASy TrEMBL
Match: A0A6J1CM01 (bifunctional epoxide hydrolase 2-like OS=Momordica charantia OX=3673 GN=LOC111012513 PE=4 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 1.8e-130 Identity = 227/290 (78.28%), Postives = 259/290 (89.31%), Query Frame = 0
BLAST of Sed0004450.2 vs. ExPASy TrEMBL
Match: A0A0A0KK45 (AB hydrolase-1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517170 PE=4 SV=1) HSP 1 Score: 474.2 bits (1219), Expect = 4.0e-130 Identity = 225/290 (77.59%), Postives = 253/290 (87.24%), Query Frame = 0
BLAST of Sed0004450.2 vs. ExPASy TrEMBL
Match: A0A5D3CNW3 (Bifunctional epoxide hydrolase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007300 PE=4 SV=1) HSP 1 Score: 472.2 bits (1214), Expect = 1.5e-129 Identity = 224/290 (77.24%), Postives = 253/290 (87.24%), Query Frame = 0
BLAST of Sed0004450.2 vs. ExPASy TrEMBL
Match: A0A1S3B0J7 (bifunctional epoxide hydrolase 2-like OS=Cucumis melo OX=3656 GN=LOC103484540 PE=4 SV=1) HSP 1 Score: 472.2 bits (1214), Expect = 1.5e-129 Identity = 224/290 (77.24%), Postives = 253/290 (87.24%), Query Frame = 0
BLAST of Sed0004450.2 vs. ExPASy TrEMBL
Match: A0A6J1GEN9 (bifunctional epoxide hydrolase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111453470 PE=4 SV=1) HSP 1 Score: 463.8 bits (1192), Expect = 5.4e-127 Identity = 220/290 (75.86%), Postives = 255/290 (87.93%), Query Frame = 0
BLAST of Sed0004450.2 vs. TAIR 10
Match: AT3G51000.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 202.2 bits (513), Expect = 5.7e-52 Identity = 105/292 (35.96%), Postives = 176/292 (60.27%), Query Frame = 0
BLAST of Sed0004450.2 vs. TAIR 10
Match: AT4G02340.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 185.7 bits (470), Expect = 5.5e-47 Identity = 101/293 (34.47%), Postives = 156/293 (53.24%), Query Frame = 0
BLAST of Sed0004450.2 vs. TAIR 10
Match: AT2G26740.1 (soluble epoxide hydrolase ) HSP 1 Score: 182.2 bits (461), Expect = 6.1e-46 Identity = 101/298 (33.89%), Postives = 166/298 (55.70%), Query Frame = 0
BLAST of Sed0004450.2 vs. TAIR 10
Match: AT2G26750.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 176.0 bits (445), Expect = 4.4e-44 Identity = 98/301 (32.56%), Postives = 162/301 (53.82%), Query Frame = 0
BLAST of Sed0004450.2 vs. TAIR 10
Match: AT3G05600.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 171.4 bits (433), Expect = 1.1e-42 Identity = 97/297 (32.66%), Postives = 159/297 (53.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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