Sed0003350.1 (mRNA) Chayote v1

Overview
NameSed0003350.1
TypemRNA
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
LocationLG03: 2665047 .. 2667521 (+)
Sequence length2475
RNA-Seq ExpressionSed0003350.1
SyntenySed0003350.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAGAGCAAAAGAATGCGCCACTATGCGAAGGAGTTGGGGCCGCTCGTAATATCATGGCTGTGACTGCGGCCTCCATACTCAACCGCCTTATTTCCCGGAAGAATCTGACCGCCGGAGCCCAACCCGACGGCGCCGGAGCCGCCACCACCGCCATCCTCAAATACCTAAAAGCGGGTCGTCTTCGAAAAGCTGTCTCCGTCCTGTTCGATTCTCCATTCCCATTTCCTCATCCTCTGTACGCCCGCCTCTTCCAAATTTGCTCTTCCAATCGCGCACTTCTCGAGGCTCGAAAGGTCGAGTCTCATTTGGTCACTTTTTGCCCCACGCCGCCGATTTTCCTGCTGAATCGGGCCATTGAAGCGTATGGCAAATGTGGGTGTTTGGTGGATGCGCGAGAGCTGTTCGACGAAATGCCTCACAGAGATGGGGGTTCTTGGAATGCCATGTTAACGGCGTATTCGCAGAATGGGTATGGTTTTGAAGCGTTGAATTTGTTTTTGGTTATGAATAGGTTTGGTGTTTATGCTACTAAGATCACTTTAGCCAGTGTCCTTGGTTCTTGTGGTGCTGCTTTGGCTCTTCACTTTTCTAGGCAAATTCACGGCCGTATTGTGAAATCTGGCTTTGTTGGCAATGTGATTCTCGAGAGTTCTCTTGTGGATGTGTATGGAAAGTGCAGGGTTATGAAGGATGCACGTAGGATGTTTGATGAAATGCAGAGTCGTAATGATGTTTCCTGGAATGTGATTGTTAGGCGTTACCTTGAGGTGGATAATGGGAAAGAGGCTGTGTCAATGTTTTTCCAAATGTTTCGAGAAGCAATGATGCCATTGAGTTTTACCTTTTCCAATGCTTTGATTGCTTGTTCAAGTATGACAGCTCTCATAGAAGGTAGGCAAATTCATGGCGTCGTAGTTAAAGTGGGTTTTGCAGAGGATGAGGTTATTTCAAGCTCTTTAATTGACATGTATATAAAATGTGGAAGGTTAGAAAATGCTCACCAAGTATTTAACCAACCCAGTTCAAGAAATCTCATTTCTTGGACTTCAATGGTATATGGATATGCAATGTCTTGGGAAGTTCTAAAAGCTCGGGAGCTTTTCAATGAAATGCCTGAACGCAATGTGATTTCATGGAATGCTATGTTGGCCGGGTATATTCATTCTGCTCAATGGGAAGAGGCGTTAGACTTTGTCCATTTGATGCGCAGTTCGATTAAGGATACTGATCATGTAACTATTCGCTTAATACTGAATGTTTGTACTGGCCTTTTAGATGTTGAAAGAGGAAAGCAAGTTCATGGTTTTGTGTATAGAATTGGTTTCTATTCTAATCTCTTTATTGGTAATGGCCTTCTTGACATGTACGGTAAATGTGGGAACTTGAAAAGTGCCAGAGTTTGGTTTTACCAAATGAGTCAATGGCGGGATGGTGTCTCCTGGAATGCTATACTGACTACATATGCTCGTCATGGCATGAGCGAACAGGCCATGACGATTTTCTCAGAGATGCAATGGGAAACAGCTCCTAGTAAATATACCTTTGCTACTCTTCTAGGAGCCTGTGCAAACACTCTTGCACTAGGTCAGGGCAAACAAATCCATGGCTTCATGATTAGAAATAATTATGAGATAGACATTGTAGTCAACGGAGCTTTAGTTGACATGTACTGCAAATGCCGGGAACTTGAGTACGCTCTCAAGATTTTTGAAAATGCAGCTTCAAGGGATGTGATTTTGTGGAACTCCATAATCTTAGGATGCTGCCACAACAGAAGGAGCTCAATAGTAATCGAATTGTTTCAGTGGATGACGATGGAGGAAGACATTAGACCGGACCATGTGACCTTCCAAGGTATTTTACTTGCTTGTGTATACGAAAATCTCGTCGAGTTGGGTAGGCAGTGTTTCGATTCAATGAGTGATAAGTTCTGTATCATACCTCGATTAGAGCACTATGAATGCATGATCGAGCTCTATGGTAGACATGGAAACATGGATGAGCTCGAAAATTTTGTCAACAATATGCCTTTTGATCCCACTGTGCCAATGCTAGAAAGAATTCTTGATGCATGTAGAAAACACGGAAACTCAAGGTTGGAAGAAAGGGTAGCTGTAAAACTTGATGAGCAAACTATTTCACTGTGAAATCATGGAAGCAACAAGAAAAACCATGTTCTCAGATCATGCCTTCATGGTTGAAGACCGTTGGGAAGTTGTCTCTCTTAGGATCCAAACTTGTTGGCTATATGCTCGATAACGTCAACAATCAAAGAAAAATTTTAATCCAAGGCATAATGCGAAGAGGCCTTGAAGTTACTTATCACTAAAGTATTCAGTTTTGGATATTGGTAGCCATTGATGAGCAATTTATGTTCAAGAGCTTAATGAGAAGAAACCAGGATCTCGATCTACTCAACCTGTTGACTGTTAGAATCCTCATAAAGTCAAGTCACTACCTAACTATGCTGCCA

mRNA sequence

GAAAGAGCAAAAGAATGCGCCACTATGCGAAGGAGTTGGGGCCGCTCGTAATATCATGGCTGTGACTGCGGCCTCCATACTCAACCGCCTTATTTCCCGGAAGAATCTGACCGCCGGAGCCCAACCCGACGGCGCCGGAGCCGCCACCACCGCCATCCTCAAATACCTAAAAGCGGGTCGTCTTCGAAAAGCTGTCTCCGTCCTGTTCGATTCTCCATTCCCATTTCCTCATCCTCTGTACGCCCGCCTCTTCCAAATTTGCTCTTCCAATCGCGCACTTCTCGAGGCTCGAAAGGTCGAGTCTCATTTGGTCACTTTTTGCCCCACGCCGCCGATTTTCCTGCTGAATCGGGCCATTGAAGCGTATGGCAAATGTGGGTGTTTGGTGGATGCGCGAGAGCTGTTCGACGAAATGCCTCACAGAGATGGGGGTTCTTGGAATGCCATGTTAACGGCGTATTCGCAGAATGGGTATGGTTTTGAAGCGTTGAATTTGTTTTTGGTTATGAATAGGTTTGGTGTTTATGCTACTAAGATCACTTTAGCCAGTGTCCTTGGTTCTTGTGGTGCTGCTTTGGCTCTTCACTTTTCTAGGCAAATTCACGGCCGTATTGTGAAATCTGGCTTTGTTGGCAATGTGATTCTCGAGAGTTCTCTTGTGGATGTGTATGGAAAGTGCAGGGTTATGAAGGATGCACGTAGGATGTTTGATGAAATGCAGAGTCGTAATGATGTTTCCTGGAATGTGATTGTTAGGCGTTACCTTGAGGTGGATAATGGGAAAGAGGCTGTGTCAATGTTTTTCCAAATGTTTCGAGAAGCAATGATGCCATTGAGTTTTACCTTTTCCAATGCTTTGATTGCTTGTTCAAGTATGACAGCTCTCATAGAAGGTAGGCAAATTCATGGCGTCGTAGTTAAAGTGGGTTTTGCAGAGGATGAGGTTATTTCAAGCTCTTTAATTGACATGTATATAAAATGTGGAAGGTTAGAAAATGCTCACCAAGTATTTAACCAACCCAGTTCAAGAAATCTCATTTCTTGGACTTCAATGGTATATGGATATGCAATGTCTTGGGAAGTTCTAAAAGCTCGGGAGCTTTTCAATGAAATGCCTGAACGCAATGTGATTTCATGGAATGCTATGTTGGCCGGGTATATTCATTCTGCTCAATGGGAAGAGGCGTTAGACTTTGTCCATTTGATGCGCAGTTCGATTAAGGATACTGATCATGTAACTATTCGCTTAATACTGAATGTTTGTACTGGCCTTTTAGATGTTGAAAGAGGAAAGCAAGTTCATGGTTTTGTGTATAGAATTGGTTTCTATTCTAATCTCTTTATTGGTAATGGCCTTCTTGACATGTACGGTAAATGTGGGAACTTGAAAAGTGCCAGAGTTTGGTTTTACCAAATGAGTCAATGGCGGGATGGTGTCTCCTGGAATGCTATACTGACTACATATGCTCGTCATGGCATGAGCGAACAGGCCATGACGATTTTCTCAGAGATGCAATGGGAAACAGCTCCTAGTAAATATACCTTTGCTACTCTTCTAGGAGCCTGTGCAAACACTCTTGCACTAGGTCAGGGCAAACAAATCCATGGCTTCATGATTAGAAATAATTATGAGATAGACATTGTAGTCAACGGAGCTTTAGTTGACATGTACTGCAAATGCCGGGAACTTGAGTACGCTCTCAAGATTTTTGAAAATGCAGCTTCAAGGGATGTGATTTTGTGGAACTCCATAATCTTAGGATGCTGCCACAACAGAAGGAGCTCAATAGTAATCGAATTGTTTCAGTGGATGACGATGGAGGAAGACATTAGACCGGACCATGTGACCTTCCAAGGTATTTTACTTGCTTGTGTATACGAAAATCTCGTCGAGTTGGGTAGGCAGTGTTTCGATTCAATGAGTGATAAGTTCTGTATCATACCTCGATTAGAGCACTATGAATGCATGATCGAGCTCTATGGTAGACATGGAAACATGGATGAGCTCGAAAATTTTGTCAACAATATGCCTTTTGATCCCACTGTGCCAATGCTAGAAAGAATTCTTGATGCATGTAGAAAACACGGAAACTCAAGGTTGGAAGAAAGGGTAGCTGTAAAACTTGATGAGCAAACTATTTCACTGTGAAATCATGGAAGCAACAAGAAAAACCATGTTCTCAGATCATGCCTTCATGGTTGAAGACCGTTGGGAAGTTGTCTCTCTTAGGATCCAAACTTGTTGGCTATATGCTCGATAACGTCAACAATCAAAGAAAAATTTTAATCCAAGGCATAATGCGAAGAGGCCTTGAAGTTACTTATCACTAAAGTATTCAGTTTTGGATATTGGTAGCCATTGATGAGCAATTTATGTTCAAGAGCTTAATGAGAAGAAACCAGGATCTCGATCTACTCAACCTGTTGACTGTTAGAATCCTCATAAAGTCAAGTCACTACCTAACTATGCTGCCA

Coding sequence (CDS)

ATGGCTGTGACTGCGGCCTCCATACTCAACCGCCTTATTTCCCGGAAGAATCTGACCGCCGGAGCCCAACCCGACGGCGCCGGAGCCGCCACCACCGCCATCCTCAAATACCTAAAAGCGGGTCGTCTTCGAAAAGCTGTCTCCGTCCTGTTCGATTCTCCATTCCCATTTCCTCATCCTCTGTACGCCCGCCTCTTCCAAATTTGCTCTTCCAATCGCGCACTTCTCGAGGCTCGAAAGGTCGAGTCTCATTTGGTCACTTTTTGCCCCACGCCGCCGATTTTCCTGCTGAATCGGGCCATTGAAGCGTATGGCAAATGTGGGTGTTTGGTGGATGCGCGAGAGCTGTTCGACGAAATGCCTCACAGAGATGGGGGTTCTTGGAATGCCATGTTAACGGCGTATTCGCAGAATGGGTATGGTTTTGAAGCGTTGAATTTGTTTTTGGTTATGAATAGGTTTGGTGTTTATGCTACTAAGATCACTTTAGCCAGTGTCCTTGGTTCTTGTGGTGCTGCTTTGGCTCTTCACTTTTCTAGGCAAATTCACGGCCGTATTGTGAAATCTGGCTTTGTTGGCAATGTGATTCTCGAGAGTTCTCTTGTGGATGTGTATGGAAAGTGCAGGGTTATGAAGGATGCACGTAGGATGTTTGATGAAATGCAGAGTCGTAATGATGTTTCCTGGAATGTGATTGTTAGGCGTTACCTTGAGGTGGATAATGGGAAAGAGGCTGTGTCAATGTTTTTCCAAATGTTTCGAGAAGCAATGATGCCATTGAGTTTTACCTTTTCCAATGCTTTGATTGCTTGTTCAAGTATGACAGCTCTCATAGAAGGTAGGCAAATTCATGGCGTCGTAGTTAAAGTGGGTTTTGCAGAGGATGAGGTTATTTCAAGCTCTTTAATTGACATGTATATAAAATGTGGAAGGTTAGAAAATGCTCACCAAGTATTTAACCAACCCAGTTCAAGAAATCTCATTTCTTGGACTTCAATGGTATATGGATATGCAATGTCTTGGGAAGTTCTAAAAGCTCGGGAGCTTTTCAATGAAATGCCTGAACGCAATGTGATTTCATGGAATGCTATGTTGGCCGGGTATATTCATTCTGCTCAATGGGAAGAGGCGTTAGACTTTGTCCATTTGATGCGCAGTTCGATTAAGGATACTGATCATGTAACTATTCGCTTAATACTGAATGTTTGTACTGGCCTTTTAGATGTTGAAAGAGGAAAGCAAGTTCATGGTTTTGTGTATAGAATTGGTTTCTATTCTAATCTCTTTATTGGTAATGGCCTTCTTGACATGTACGGTAAATGTGGGAACTTGAAAAGTGCCAGAGTTTGGTTTTACCAAATGAGTCAATGGCGGGATGGTGTCTCCTGGAATGCTATACTGACTACATATGCTCGTCATGGCATGAGCGAACAGGCCATGACGATTTTCTCAGAGATGCAATGGGAAACAGCTCCTAGTAAATATACCTTTGCTACTCTTCTAGGAGCCTGTGCAAACACTCTTGCACTAGGTCAGGGCAAACAAATCCATGGCTTCATGATTAGAAATAATTATGAGATAGACATTGTAGTCAACGGAGCTTTAGTTGACATGTACTGCAAATGCCGGGAACTTGAGTACGCTCTCAAGATTTTTGAAAATGCAGCTTCAAGGGATGTGATTTTGTGGAACTCCATAATCTTAGGATGCTGCCACAACAGAAGGAGCTCAATAGTAATCGAATTGTTTCAGTGGATGACGATGGAGGAAGACATTAGACCGGACCATGTGACCTTCCAAGGTATTTTACTTGCTTGTGTATACGAAAATCTCGTCGAGTTGGGTAGGCAGTGTTTCGATTCAATGAGTGATAAGTTCTGTATCATACCTCGATTAGAGCACTATGAATGCATGATCGAGCTCTATGGTAGACATGGAAACATGGATGAGCTCGAAAATTTTGTCAACAATATGCCTTTTGATCCCACTGTGCCAATGCTAGAAAGAATTCTTGATGCATGTAGAAAACACGGAAACTCAAGGTTGGAAGAAAGGGTAGCTGTAAAACTTGATGAGCAAACTATTTCACTGTGA

Protein sequence

MAVTAASILNRLISRKNLTAGAQPDGAGAATTAILKYLKAGRLRKAVSVLFDSPFPFPHPLYARLFQICSSNRALLEARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLVDARELFDEMPHRDGGSWNAMLTAYSQNGYGFEALNLFLVMNRFGVYATKITLASVLGSCGAALALHFSRQIHGRIVKSGFVGNVILESSLVDVYGKCRVMKDARRMFDEMQSRNDVSWNVIVRRYLEVDNGKEAVSMFFQMFREAMMPLSFTFSNALIACSSMTALIEGRQIHGVVVKVGFAEDEVISSSLIDMYIKCGRLENAHQVFNQPSSRNLISWTSMVYGYAMSWEVLKARELFNEMPERNVISWNAMLAGYIHSAQWEEALDFVHLMRSSIKDTDHVTIRLILNVCTGLLDVERGKQVHGFVYRIGFYSNLFIGNGLLDMYGKCGNLKSARVWFYQMSQWRDGVSWNAILTTYARHGMSEQAMTIFSEMQWETAPSKYTFATLLGACANTLALGQGKQIHGFMIRNNYEIDIVVNGALVDMYCKCRELEYALKIFENAASRDVILWNSIILGCCHNRRSSIVIELFQWMTMEEDIRPDHVTFQGILLACVYENLVELGRQCFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFVNNMPFDPTVPMLERILDACRKHGNSRLEERVAVKLDEQTISL
Homology
[Close]
BLAST of Sed0003350.1 vs. NCBI nr
Match: XP_022993859.1 (pentatricopeptide repeat-containing protein At3g26540 [Cucurbita maxima])

HSP 1 Score: 1249.2 bits (3231), Expect = 0.0e+00
Identity = 602/695 (86.62%), Postives = 644/695 (92.66%), Query Frame = 0 

Query: 1   MAVTAASILNRLISRKNLTAGAQPDGAGAATTAILKYLKAGRLRKAVSVLFDSPFPFPHP 60
           M V+AASILNRL+S KNL+A  QP GA A  T ILKYL+ GRLRKAVSVLFDSPFPFPHP
Sbjct: 1   MGVSAASILNRLLSHKNLSARTQPTGAKAVATTILKYLEEGRLRKAVSVLFDSPFPFPHP 60

Query: 61  LYARLFQICSSNRALLEARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLVDARELFDEM 120
           LYARLFQICSS RAL+EARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLVDARELF+EM
Sbjct: 61  LYARLFQICSSTRALVEARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLVDARELFEEM 120

Query: 121 PHRDGGSWNAMLTAYSQNGYGFEALNLFLVMNRFGVYATKITLASVLGSCGAALALHFSR 180
           P RDGGSWNAM+TAY++NG+  EALNLFL MN+ GVYAT+ITLASVLGSCG+ LALH SR
Sbjct: 121 PQRDGGSWNAMITAYTKNGFALEALNLFLNMNKSGVYATEITLASVLGSCGSVLALHLSR 180

Query: 181 QIHGRIVKSGFVGNVILESSLVDVYGKCRVMKDARRMFDEMQSRNDVSWNVIVRRYLEVD 240
           Q+HG IVKSGFVGNVILESSLVDVYGKCR+M DAR MFDE+Q+RNDVSWNVIVRRYLEVD
Sbjct: 181 QVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQNRNDVSWNVIVRRYLEVD 240

Query: 241 NGKEAVSMFFQMFREAMMPLSFTFSNALIACSSMTALIEGRQIHGVVVKVGFAEDEVISS 300
           +GK AVSMFFQMFREA+MPLSFTFSNALIACSSM ALIEGRQIHG+VVKVG   DEVISS
Sbjct: 241 DGKLAVSMFFQMFREAVMPLSFTFSNALIACSSMAALIEGRQIHGIVVKVGLEGDEVISS 300

Query: 301 SLIDMYIKCGRLENAHQVFNQPSSRNLISWTSMVYGYAMSWEVLKARELFNEMPERNVIS 360
           SLIDMY+KCG LENAHQVF QPSSRNLISWTSMVYGYAMS EVLKARELFNEMPERNVIS
Sbjct: 301 SLIDMYVKCGTLENAHQVFIQPSSRNLISWTSMVYGYAMSGEVLKARELFNEMPERNVIS 360

Query: 361 WNAMLAGYIHSAQWEEALDFVHLMRSSIKDTDHVTIRLILNVCTGLLDVERGKQVHGFVY 420
           WNAMLAGYIHS QWEEALDFVHLM +SIKD DHVT+RLILNVCTGLLDVERGKQVHGF+Y
Sbjct: 361 WNAMLAGYIHSGQWEEALDFVHLMHNSIKDVDHVTLRLILNVCTGLLDVERGKQVHGFIY 420

Query: 421 RIGFYSNLFIGNGLLDMYGKCGNLKSARVWFYQMSQWRDGVSWNAILTTYARHGMSEQAM 480
           RIGFY+NL+IGN LLDMYGKCGNLKSARVWFYQMSQWRD VSWNA+LTTYARHGMSEQAM
Sbjct: 421 RIGFYANLYIGNALLDMYGKCGNLKSARVWFYQMSQWRDEVSWNALLTTYARHGMSEQAM 480

Query: 481 TIFSEMQWETAPSKYTFATLLGACANTLALGQGKQIHGFMIRNNYEIDIVVNGALVDMYC 540
           TIFSEMQWE APSK+TFATLL ACANT AL QGKQIHGFM+RNNYEIDI V+GALVDMYC
Sbjct: 481 TIFSEMQWEAAPSKFTFATLLAACANTFALDQGKQIHGFMVRNNYEIDIAVSGALVDMYC 540

Query: 541 KCRELEYALKIFENAASRDVILWNSIILGCCHNRRSSIVIELFQWMTMEEDIRPDHVTFQ 600
           KCR+LEYALK+FENAASRDV+LWNSIILGCCHNRR  IVIELFQ M ME+ I PDHVTFQ
Sbjct: 541 KCRQLEYALKVFENAASRDVVLWNSIILGCCHNRRGMIVIELFQMMMMEKGINPDHVTFQ 600

Query: 601 GILLACVYENLVELGRQCFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFVNNMPF 660
           GILLACVYENLVELGRQ FDSMSDKFCIIPRLEHYECMIELYGRHGNMDELE F+ NMPF
Sbjct: 601 GILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELEKFIINMPF 660

Query: 661 DPTVPMLERILDACRKHGNSRLEERVAVKLDEQTI 696
           DPTVPMLE++LDACRKHG+SRL E VA++L+EQ +
Sbjct: 661 DPTVPMLEKVLDACRKHGHSRLGEWVAIRLNEQNL 695

[Close]
BLAST of Sed0003350.1 vs. NCBI nr
Match: XP_023550069.1 (pentatricopeptide repeat-containing protein At3g26540 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1247.3 bits (3226), Expect = 0.0e+00
Identity = 602/695 (86.62%), Postives = 641/695 (92.23%), Query Frame = 0 

Query: 1   MAVTAASILNRLISRKNLTAGAQPDGAGAATTAILKYLKAGRLRKAVSVLFDSPFPFPHP 60
           M V+AASILNRL+S KNL+A  QP GA AA T ILKYL+ GRLRKAVSVLFDSPFPFPHP
Sbjct: 1   MGVSAASILNRLLSHKNLSARTQPTGAKAAATTILKYLEEGRLRKAVSVLFDSPFPFPHP 60

Query: 61  LYARLFQICSSNRALLEARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLVDARELFDEM 120
           LYARLFQICSS RAL+EARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCL DARELF EM
Sbjct: 61  LYARLFQICSSTRALVEARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLEDARELFQEM 120

Query: 121 PHRDGGSWNAMLTAYSQNGYGFEALNLFLVMNRFGVYATKITLASVLGSCGAALALHFSR 180
           P RDGGSWNAMLTAY+QNG+  EALNLFL MN+ GVYAT+ITLASVLGSCG+ LALH SR
Sbjct: 121 PQRDGGSWNAMLTAYTQNGFALEALNLFLNMNKSGVYATEITLASVLGSCGSVLALHLSR 180

Query: 181 QIHGRIVKSGFVGNVILESSLVDVYGKCRVMKDARRMFDEMQSRNDVSWNVIVRRYLEVD 240
           Q+HG IVKSGFVGNVILESSLVDVYGKCR+M DAR MFDE+Q+RNDVSWNVIVRRYLEVD
Sbjct: 181 QVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQNRNDVSWNVIVRRYLEVD 240

Query: 241 NGKEAVSMFFQMFREAMMPLSFTFSNALIACSSMTALIEGRQIHGVVVKVGFAEDEVISS 300
           +GK AVSMFFQMFREA+MPLSFTFSNALIACSSM ALIEGRQIHG+VVKVG  EDEVISS
Sbjct: 241 DGKMAVSMFFQMFREAVMPLSFTFSNALIACSSMAALIEGRQIHGIVVKVGLEEDEVISS 300

Query: 301 SLIDMYIKCGRLENAHQVFNQPSSRNLISWTSMVYGYAMSWEVLKARELFNEMPERNVIS 360
           SLIDMY+KCG LENAHQVF QPSSRNLISWTSMVYGYAMS EVLKARELFNEMPERNVIS
Sbjct: 301 SLIDMYVKCGTLENAHQVFTQPSSRNLISWTSMVYGYAMSGEVLKARELFNEMPERNVIS 360

Query: 361 WNAMLAGYIHSAQWEEALDFVHLMRSSIKDTDHVTIRLILNVCTGLLDVERGKQVHGFVY 420
           WNAMLAGYIHS QW EALDF HLM +SIKD DHVT+RLILNVCTGLLDVERGKQVHGF+Y
Sbjct: 361 WNAMLAGYIHSGQWAEALDFFHLMHNSIKDVDHVTLRLILNVCTGLLDVERGKQVHGFIY 420

Query: 421 RIGFYSNLFIGNGLLDMYGKCGNLKSARVWFYQMSQWRDGVSWNAILTTYARHGMSEQAM 480
           RIGFY+NL+IGN LLDMYGKCGNLKSARVWFYQMSQWRD VSWNA+LTTYARHGMSEQAM
Sbjct: 421 RIGFYANLYIGNALLDMYGKCGNLKSARVWFYQMSQWRDKVSWNALLTTYARHGMSEQAM 480

Query: 481 TIFSEMQWETAPSKYTFATLLGACANTLALGQGKQIHGFMIRNNYEIDIVVNGALVDMYC 540
           TIFSEMQWE APSK+TFATLL ACANT AL QGKQIHGFM+RNNYEIDI V+GALVDMYC
Sbjct: 481 TIFSEMQWEAAPSKFTFATLLAACANTFALDQGKQIHGFMVRNNYEIDIAVSGALVDMYC 540

Query: 541 KCRELEYALKIFENAASRDVILWNSIILGCCHNRRSSIVIELFQWMTMEEDIRPDHVTFQ 600
           KCR+LEYALK+FENAASRDV+LWNSIILGCCHN R  IVIELFQ M ME+ I PDHVTFQ
Sbjct: 541 KCRQLEYALKVFENAASRDVVLWNSIILGCCHNGRGMIVIELFQMMMMEKGISPDHVTFQ 600

Query: 601 GILLACVYENLVELGRQCFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFVNNMPF 660
           GILLACVYENLVELGRQ FDSMSDKFCIIPRLEHYECMIELYGRHGNMDELE F+NNMPF
Sbjct: 601 GILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELEKFINNMPF 660

Query: 661 DPTVPMLERILDACRKHGNSRLEERVAVKLDEQTI 696
           DPTV MLE++LDACRKHG+SRL E VA++L+EQ +
Sbjct: 661 DPTVSMLEKVLDACRKHGHSRLGEWVAIRLNEQNL 695

[Close]
BLAST of Sed0003350.1 vs. NCBI nr
Match: XP_022938461.1 (pentatricopeptide repeat-containing protein At3g26540 [Cucurbita moschata])

HSP 1 Score: 1245.7 bits (3222), Expect = 0.0e+00
Identity = 598/695 (86.04%), Postives = 643/695 (92.52%), Query Frame = 0 

Query: 1   MAVTAASILNRLISRKNLTAGAQPDGAGAATTAILKYLKAGRLRKAVSVLFDSPFPFPHP 60
           M V+AASILNRL+S KNL+A  QP GA AA T ILKYL+ GRLRKAVSVLFDSPFPFPHP
Sbjct: 1   MGVSAASILNRLLSHKNLSARTQPTGAKAAATTILKYLEEGRLRKAVSVLFDSPFPFPHP 60

Query: 61  LYARLFQICSSNRALLEARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLVDARELFDEM 120
           LYARLFQICSS RAL+EARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCL DARELF+EM
Sbjct: 61  LYARLFQICSSTRALVEARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLEDARELFEEM 120

Query: 121 PHRDGGSWNAMLTAYSQNGYGFEALNLFLVMNRFGVYATKITLASVLGSCGAALALHFSR 180
           P RDGGSWNAMLTAY+QNG+  E+LNLFL MN+ GVYAT+ITLASVLGSCG+ LALH SR
Sbjct: 121 PQRDGGSWNAMLTAYTQNGFALESLNLFLNMNKSGVYATEITLASVLGSCGSVLALHLSR 180

Query: 181 QIHGRIVKSGFVGNVILESSLVDVYGKCRVMKDARRMFDEMQSRNDVSWNVIVRRYLEVD 240
           Q+HG IVKSGFVGNVILESSLVDVYGKCR+M DAR MFDE+Q+RNDVSWNVIVRRYLEV 
Sbjct: 181 QVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQNRNDVSWNVIVRRYLEVG 240

Query: 241 NGKEAVSMFFQMFREAMMPLSFTFSNALIACSSMTALIEGRQIHGVVVKVGFAEDEVISS 300
           +GK AVSMFFQMFREA+MPLSFTFSNALIACSSM ALIEGRQIHG+VVKVG  EDEVISS
Sbjct: 241 DGKMAVSMFFQMFREAVMPLSFTFSNALIACSSMAALIEGRQIHGIVVKVGLEEDEVISS 300

Query: 301 SLIDMYIKCGRLENAHQVFNQPSSRNLISWTSMVYGYAMSWEVLKARELFNEMPERNVIS 360
           SLIDMY+KCG L+NAHQVF QPSSRNLISWTSMVYGYAMS EVLKARELFNEMPERNVIS
Sbjct: 301 SLIDMYVKCGTLDNAHQVFTQPSSRNLISWTSMVYGYAMSGEVLKARELFNEMPERNVIS 360

Query: 361 WNAMLAGYIHSAQWEEALDFVHLMRSSIKDTDHVTIRLILNVCTGLLDVERGKQVHGFVY 420
           WNAMLAGYIHS QW+EALDFVHLM +SIKD DHVT+RLILNVCTGLLDVERGKQVHGF+Y
Sbjct: 361 WNAMLAGYIHSGQWKEALDFVHLMHNSIKDVDHVTLRLILNVCTGLLDVERGKQVHGFIY 420

Query: 421 RIGFYSNLFIGNGLLDMYGKCGNLKSARVWFYQMSQWRDGVSWNAILTTYARHGMSEQAM 480
           RIGFY+NL+IGN LLDMYGKCGNLKSARVWFYQMSQWRD VSWNA+LTTYARHGMSEQAM
Sbjct: 421 RIGFYANLYIGNALLDMYGKCGNLKSARVWFYQMSQWRDKVSWNALLTTYARHGMSEQAM 480

Query: 481 TIFSEMQWETAPSKYTFATLLGACANTLALGQGKQIHGFMIRNNYEIDIVVNGALVDMYC 540
           TIFSEMQWE APSK+TFATLL ACANT AL QGKQIHGFM+RNNYEID+ V+GALVDMYC
Sbjct: 481 TIFSEMQWEAAPSKFTFATLLAACANTFALDQGKQIHGFMVRNNYEIDVAVSGALVDMYC 540

Query: 541 KCRELEYALKIFENAASRDVILWNSIILGCCHNRRSSIVIELFQWMTMEEDIRPDHVTFQ 600
           KCR+LEYALK+FENAASRDV+LWNSIILGCCHNRR  IVIELF+ M ME+ I PDHVTFQ
Sbjct: 541 KCRQLEYALKVFENAASRDVVLWNSIILGCCHNRRGMIVIELFEMMMMEKGINPDHVTFQ 600

Query: 601 GILLACVYENLVELGRQCFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFVNNMPF 660
           GILLACVYENLVELGRQ FDSM DKFCIIPRLEHYEC+IELYGRHGNMDELE F+NNMPF
Sbjct: 601 GILLACVYENLVELGRQYFDSMIDKFCIIPRLEHYECVIELYGRHGNMDELEKFINNMPF 660

Query: 661 DPTVPMLERILDACRKHGNSRLEERVAVKLDEQTI 696
           DPTVPMLE++LDACRKHG+SRL E VA++L EQ +
Sbjct: 661 DPTVPMLEKVLDACRKHGHSRLGEWVAIRLKEQNL 695

[Close]
BLAST of Sed0003350.1 vs. NCBI nr
Match: KAG7016451.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1244.2 bits (3218), Expect = 0.0e+00
Identity = 596/695 (85.76%), Postives = 644/695 (92.66%), Query Frame = 0 

Query: 1   MAVTAASILNRLISRKNLTAGAQPDGAGAATTAILKYLKAGRLRKAVSVLFDSPFPFPHP 60
           M V+AASILNRL+S KNL+A  QP GA AA T +LKYL+ GRLRKAVSVLF+SPFPFPHP
Sbjct: 1   MGVSAASILNRLLSHKNLSARTQPTGAKAAATTVLKYLEEGRLRKAVSVLFNSPFPFPHP 60

Query: 61  LYARLFQICSSNRALLEARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLVDARELFDEM 120
           LYARLFQICSS RAL+EARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCL DARELF+EM
Sbjct: 61  LYARLFQICSSTRALVEARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLEDARELFEEM 120

Query: 121 PHRDGGSWNAMLTAYSQNGYGFEALNLFLVMNRFGVYATKITLASVLGSCGAALALHFSR 180
           P RDGGSWNAMLTAY+QNG+  E+LNLFL MN+ GVYAT+ITLASVLGSCG+ LALH SR
Sbjct: 121 PQRDGGSWNAMLTAYTQNGFALESLNLFLNMNKSGVYATEITLASVLGSCGSVLALHLSR 180

Query: 181 QIHGRIVKSGFVGNVILESSLVDVYGKCRVMKDARRMFDEMQSRNDVSWNVIVRRYLEVD 240
           Q+HG IVKSGFVGNVILESSLVDVYGKCR+M DAR MFDE+Q+RNDVSWNVIVRRYLEV 
Sbjct: 181 QVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQNRNDVSWNVIVRRYLEVG 240

Query: 241 NGKEAVSMFFQMFREAMMPLSFTFSNALIACSSMTALIEGRQIHGVVVKVGFAEDEVISS 300
           +GK AVSMFFQMFREA+MPLSFTFSNALIACSSM ALIEGRQIHG+VVKVG  EDEVISS
Sbjct: 241 DGKMAVSMFFQMFREAVMPLSFTFSNALIACSSMAALIEGRQIHGIVVKVGLEEDEVISS 300

Query: 301 SLIDMYIKCGRLENAHQVFNQPSSRNLISWTSMVYGYAMSWEVLKARELFNEMPERNVIS 360
           SLIDMY+KCG L+NAHQVF QPSSRNLISWTSMVYGYAMS EVLKARELFNEMPERNVIS
Sbjct: 301 SLIDMYVKCGTLDNAHQVFTQPSSRNLISWTSMVYGYAMSGEVLKARELFNEMPERNVIS 360

Query: 361 WNAMLAGYIHSAQWEEALDFVHLMRSSIKDTDHVTIRLILNVCTGLLDVERGKQVHGFVY 420
           WNAMLAGYIHS QW+EALDFVHLM +SIKD DHVT+RLILNVCTGLLDVERGKQVHGF+Y
Sbjct: 361 WNAMLAGYIHSGQWKEALDFVHLMHNSIKDVDHVTLRLILNVCTGLLDVERGKQVHGFIY 420

Query: 421 RIGFYSNLFIGNGLLDMYGKCGNLKSARVWFYQMSQWRDGVSWNAILTTYARHGMSEQAM 480
           RIGFY+NL+IGN LLDMYGKCGNLKSARVWFYQMSQWRD VSWNA+LTTYARHGMSEQAM
Sbjct: 421 RIGFYANLYIGNALLDMYGKCGNLKSARVWFYQMSQWRDKVSWNALLTTYARHGMSEQAM 480

Query: 481 TIFSEMQWETAPSKYTFATLLGACANTLALGQGKQIHGFMIRNNYEIDIVVNGALVDMYC 540
           TIFSEMQWE APSK+TFATLL ACANT AL QGKQIHGFM+RNNYEID+ V+GALVDMYC
Sbjct: 481 TIFSEMQWEAAPSKFTFATLLAACANTFALDQGKQIHGFMVRNNYEIDVAVSGALVDMYC 540

Query: 541 KCRELEYALKIFENAASRDVILWNSIILGCCHNRRSSIVIELFQWMTMEEDIRPDHVTFQ 600
           KCR+LEYALK+FENAASRDV+LWNSIILGCCHNRR  IVIELF+ M ME+ I PDHVTFQ
Sbjct: 541 KCRQLEYALKVFENAASRDVVLWNSIILGCCHNRRGMIVIELFEMMMMEKGINPDHVTFQ 600

Query: 601 GILLACVYENLVELGRQCFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFVNNMPF 660
           GILLACVYENLVELGRQ FDSM DKFCIIPRLEHYEC+IELYGRHGNMDELE F+NNMPF
Sbjct: 601 GILLACVYENLVELGRQYFDSMIDKFCIIPRLEHYECVIELYGRHGNMDELEKFINNMPF 660

Query: 661 DPTVPMLERILDACRKHGNSRLEERVAVKLDEQTI 696
           DPTVPMLE++LDACRKHG+SRL E VA++L+EQ +
Sbjct: 661 DPTVPMLEKVLDACRKHGHSRLGEWVAIRLNEQNL 695

[Close]
BLAST of Sed0003350.1 vs. NCBI nr
Match: XP_038884263.1 (pentatricopeptide repeat-containing protein At3g26540 [Benincasa hispida])

HSP 1 Score: 1241.5 bits (3211), Expect = 0.0e+00
Identity = 597/693 (86.15%), Postives = 645/693 (93.07%), Query Frame = 0 

Query: 1   MAVTAASILNRLISRKNLTAGAQPDGAGAATTAILKYLKAGRLRKAVSVLFDSPFPFPHP 60
           M V+AASILNRL+SRKNLTA  +P GA AA T +LKYLK GRLRKAV VLFDSPFPFPHP
Sbjct: 1   MGVSAASILNRLLSRKNLTARTEPTGAKAAATTVLKYLKEGRLRKAVLVLFDSPFPFPHP 60

Query: 61  LYARLFQICSSNRALLEARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLVDARELFDEM 120
           LYARLFQICSSNRAL+EARKVESHLVTFCP PP FLLNRAIEAYGKCGCL DARELF+EM
Sbjct: 61  LYARLFQICSSNRALVEARKVESHLVTFCPKPPTFLLNRAIEAYGKCGCLEDARELFEEM 120

Query: 121 PHRDGGSWNAMLTAYSQNGYGFEALNLFLVMNRFGVYATKITLASVLGSCGAALALHFSR 180
           P RDGGSWNAM+TAY+QNGY  EALNLFL MN+ GVYAT+ITLASVLGSCG+ LALHFS+
Sbjct: 121 PQRDGGSWNAMITAYTQNGYASEALNLFLDMNKSGVYATEITLASVLGSCGSVLALHFSK 180

Query: 181 QIHGRIVKSGFVGNVILESSLVDVYGKCRVMKDARRMFDEMQSRNDVSWNVIVRRYLEVD 240
           QIHG IVK GFVGNVILESSLVDVYGKCR+M DAR MFDE+Q+RNDVSWNVIVRRYLEVD
Sbjct: 181 QIHGHIVKCGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQNRNDVSWNVIVRRYLEVD 240

Query: 241 NGKEAVSMFFQMFREAMMPLSFTFSNALIACSSMTALIEGRQIHGVVVKVGFAEDEVISS 300
           NGKEAVSMFFQMFREA+MPLSFTFSNALIACSSM ALIEG+QIHG+VVKVG  E+EVISS
Sbjct: 241 NGKEAVSMFFQMFREAVMPLSFTFSNALIACSSMAALIEGKQIHGIVVKVGLEENEVISS 300

Query: 301 SLIDMYIKCGRLENAHQVFNQPSSRNLISWTSMVYGYAMSWEVLKARELFNEMPERNVIS 360
           SLIDMY+KCG L NAHQVF QPSSRNLISWTSMVYGYAMS EVLKARELFNEMPERNVIS
Sbjct: 301 SLIDMYMKCGTLVNAHQVFTQPSSRNLISWTSMVYGYAMSGEVLKARELFNEMPERNVIS 360

Query: 361 WNAMLAGYIHSAQWEEALDFVHLMRSSIKDTDHVTIRLILNVCTGLLDVERGKQVHGFVY 420
           WN+MLAGYI+S QWEEAL+FVHLM SSIK+ DH+T+RLILN CTGLLDVERGKQVHGFVY
Sbjct: 361 WNSMLAGYINSRQWEEALEFVHLMHSSIKEVDHITLRLILNACTGLLDVERGKQVHGFVY 420

Query: 421 RIGFYSNLFIGNGLLDMYGKCGNLKSARVWFYQMSQWRDGVSWNAILTTYARHGMSEQAM 480
           RIGFY+NLFIGN LLDMYGKCGNLKSARVWFYQMSQWRD VSWNA+LTTYARHG+SEQAM
Sbjct: 421 RIGFYANLFIGNALLDMYGKCGNLKSARVWFYQMSQWRDKVSWNALLTTYARHGLSEQAM 480

Query: 481 TIFSEMQWETAPSKYTFATLLGACANTLALGQGKQIHGFMIRNNYEIDIVVNGALVDMYC 540
           TIFSEMQWETAPSK+TFATLLGACANT AL QGKQIHGFM+RNNYEIDIVV+GALVDMYC
Sbjct: 481 TIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYC 540

Query: 541 KCRELEYALKIFENAASRDVILWNSIILGCCHNRRSSIVIELFQWMTMEEDIRPDHVTFQ 600
           KCR+L+YALK+FE+ ASRDV+LWNSIILGCCHNRR  IVI+LFQ MTM E I+PDHVTFQ
Sbjct: 541 KCRQLDYALKVFEHVASRDVVLWNSIILGCCHNRRGMIVIKLFQLMTMVEGIKPDHVTFQ 600

Query: 601 GILLACVYENLVELGRQCFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFVNNMPF 660
           GILLACV+ENLVELGRQ FDSMS+KFCIIPRLEHYECMIELYGRHGNMDEL+ F+NNMPF
Sbjct: 601 GILLACVHENLVELGRQYFDSMSEKFCIIPRLEHYECMIELYGRHGNMDELQKFINNMPF 660

Query: 661 DPTVPMLERILDACRKHGNSRLEERVAVKLDEQ 694
           DPTVPMLERILDACRKHG+SRL E V ++L++Q
Sbjct: 661 DPTVPMLERILDACRKHGHSRLAEWVTIRLNKQ 693

[Close]
BLAST of Sed0003350.1 vs. ExPASy Swiss-Prot
Match: Q9LRV2 (Pentatricopeptide repeat-containing protein At3g26540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-A5 PE=2 SV=1)

HSP 1 Score: 779.2 bits (2011), Expect = 3.8e-224
Identity = 382/660 (57.88%), Postives = 488/660 (73.94%), Query Frame = 0 

Query: 31  TTAILKYLKAGRLRKAVSVLFDSPFPFPHPLYARLFQICSSNRALLEARKVESHLVTFCP 90
           T  IL++L+ G + KAVSVLF SP P  + LY RLF+ CSS   +++ARKV+SHLVTF P
Sbjct: 33  TRQILEHLEGGNVSKAVSVLFASPEPVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSP 92

Query: 91  TPPIFLLNRAIEAYGKCGCLVDARELFDEMPHRDGGSWNAMLTAYSQNGYGFEALNLFLV 150
            PPIFLLNRAIEAYGKCGC+ DARELF+EMP RDGGSWNA++TA +QNG   E   +F  
Sbjct: 93  LPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRR 152

Query: 151 MNRFGVYATKITLASVLGSCGAALALHFSRQIHGRIVKSGFVGNVILESSLVDVYGKCRV 210
           MNR GV AT+ + A VL SCG  L L   RQ+H  +VK G+ GNV LE+S+VDVYGKCRV
Sbjct: 153 MNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRV 212

Query: 211 MKDARRMFDEMQSRNDVSWNVIVRRYLEVDNGKEAVSMFFQMFREAMMPLSFTFSNALIA 270
           M DARR+FDE+ + +DVSWNVIVRRYLE+    EAV MFF+M    + PL+ T S+ ++A
Sbjct: 213 MSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLA 272

Query: 271 CSSMTALIEGRQIHGVVVKVGFAEDEVISSSLIDMYIKCGRLENAHQVFNQPSSRNLISW 330
           CS   AL  G+ IH + VK+    D V+S+S+ DMY+KC RLE+A +VF+Q  S++L SW
Sbjct: 273 CSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSW 332

Query: 331 TSMVYGYAMSWEVLKARELFNEMPERNVISWNAMLAGYIHSAQWEEALDFVHLMRSSIKD 390
           TS + GYAMS    +ARELF+ MPERN++SWNAML GY+H+ +W+EALDF+ LMR  I++
Sbjct: 333 TSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIEN 392

Query: 391 TDHVTIRLILNVCTGLLDVERGKQVHGFVYRIGFYSNLFIGNGLLDMYGKCGNLKSARVW 450
            D+VT+  ILNVC+G+ DV+ GKQ HGF+YR G+ +N+ + N LLDMYGKCG L+SA +W
Sbjct: 393 IDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIW 452

Query: 451 FYQMSQWRDGVSWNAILTTYARHGMSEQAMTIFSEMQWETAPSKYTFATLLGACANTLAL 510
           F QMS+ RD VSWNA+LT  AR G SEQA++ F  MQ E  PSKYT ATLL  CAN  AL
Sbjct: 453 FRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPSKYTLATLLAGCANIPAL 512

Query: 511 GQGKQIHGFMIRNNYEIDIVVNGALVDMYCKCRELEYALKIFENAASRDVILWNSIILGC 570
             GK IHGF+IR+ Y+ID+V+ GA+VDMY KCR  +YA+++F+ AA+RD+ILWNSII GC
Sbjct: 513 NLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGC 572

Query: 571 CHNRRSSIVIELFQWMTMEEDIRPDHVTFQGILLACVYENLVELGRQCFDSMSDKFCIIP 630
           C N RS  V ELF  +   E ++PDHVTF GIL AC+ E  VELG Q F SMS K+ I P
Sbjct: 573 CRNGRSKEVFELFM-LLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISP 632

Query: 631 RLEHYECMIELYGRHGNMDELENFVNNMPFDPTVPMLERILDACRKHGNSRLEERVAVKL 690
           ++EHY+CMIELY ++G + +LE F+  MPFDP + ML RI DAC+++  S+L    A +L
Sbjct: 633 QVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRL 691

[Close]
BLAST of Sed0003350.1 vs. ExPASy Swiss-Prot
Match: Q9SS60 (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H23 PE=2 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.4e-92
Identity = 190/600 (31.67%), Postives = 312/600 (52.00%), Query Frame = 0 

Query: 94  IFLLNRAIEAYGKCGCLVDARELFDEMPHRDGGSWNAMLTAYSQNGYGFEALNLFLVMNR 153
           +F+ N  ++ Y + G L  AR++FDEMP RD  SWN++++ YS +GY  EAL ++  +  
Sbjct: 141 LFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKN 200

Query: 154 FGVYATKITLASVLGSCGAALALHFSRQIHGRIVKSGFVGNVILESSLVDVYGKCRVMKD 213
             +     T++SVL + G  L +   + +HG  +KSG    V++ + LV +Y K R   D
Sbjct: 201 SWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTD 260

Query: 214 ARRMFDEMQSRNDVSWNVIVRRYLEVDNGKEAVSMFFQMFREAMMPLSFTFSNALIACSS 273
           ARR+FDEM  R+ VS+N ++  YL+++  +E+V MF +   +   P   T S+ L AC  
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGH 320

Query: 274 MTALIEGRQIHGVVVKVGFAEDEVISSSLIDMYIKCGRLENAHQVFNQPSSRNLISWTSM 333
           +  L   + I+  ++K GF  +  + + LID+Y KCG                       
Sbjct: 321 LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCG----------------------- 380

Query: 334 VYGYAMSWEVLKARELFNEMPERNVISWNAMLAGYIHSAQWEEALDFVHLMRSSIKDTDH 393
                   +++ AR++FN M  ++ +SWN++++GYI S    EA+    +M    +  DH
Sbjct: 381 --------DMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADH 440

Query: 394 VTIRLILNVCTGLLDVERGKQVHGFVYRIGFYSNLFIGNGLLDMYGKCGNLKSARVWFYQ 453
           +T  ++++V T L D++ GK +H    + G   +L + N L+DMY KCG +  +   F  
Sbjct: 441 ITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSS 500

Query: 454 MSQWRDGVSWNAILTTYARHGMSEQAMTIFSEM-QWETAPSKYTFATLLGACANTLALGQ 513
           M    D V+WN +++   R G     + + ++M + E  P   TF   L  CA+  A   
Sbjct: 501 MGT-GDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRL 560

Query: 514 GKQIHGFMIRNNYEIDIVVNGALVDMYCKCRELEYALKIFENAASRDVILWNSIILGCCH 573
           GK+IH  ++R  YE ++ +  AL++MY KC  LE + ++FE  + RDV+ W  +I     
Sbjct: 561 GKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGM 620

Query: 574 NRRSSIVIELFQWMTMEEDIRPDHVTFQGILLACVYENLVELGRQCFDSMSDKFCIIPRL 633
                  +E F  M  +  I PD V F  I+ AC +  LV+ G  CF+ M   + I P +
Sbjct: 621 YGEGEKALETFADME-KSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMI 680

Query: 634 EHYECMIELYGRHGNMDELENFVNNMPFDPTVPMLERILDACRKHGNSRLEERVAVKLDE 693
           EHY C+++L  R   + + E F+  MP  P   +   +L ACR  G+    ERV+ ++ E
Sbjct: 681 EHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIE 706

[Close]
BLAST of Sed0003350.1 vs. ExPASy Swiss-Prot
Match: Q9LFI1 (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E86 PE=2 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.0e-91
Identity = 193/638 (30.25%), Postives = 324/638 (50.78%), Query Frame = 0 

Query: 52  DSPFPFPHPLYARLFQICSSNRALLEARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLV 111
           +S F      Y  L   CSS+R+L + RK+  H++         L N  +  YGKCG L 
Sbjct: 60  NSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLR 119

Query: 112 DARELFDEMPHRDGGSWNAMLTAYSQNGYGFEALNLFLVMNRFGVYATKITLASVLGSCG 171
           DARE+FD MP R+  S+ +++T YSQNG G EA+ L+L M +  +   +    S++ +C 
Sbjct: 120 DAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACA 179

Query: 172 AALALHFSRQIHGRIVKSGFVGNVILESSLVDVYGKCRVMKDARRMFDEMQSRNDVSWNV 231
           ++  +   +Q+H +++K     ++I +++L+ +Y +   M DA R+F  +  ++ +SW+ 
Sbjct: 180 SSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSS 239

Query: 232 IVRRYLEVDNGKEAVSMFFQMFREAMM-PLSFTFSNALIACSSMTALIEGRQIHGVVVKV 291
           I+  + ++    EA+S   +M    +  P  + F ++L ACSS+     G QIHG+ +K 
Sbjct: 240 IIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS 299

Query: 292 GFAEDEVISSSLIDMYIKCGRLENAHQVFNQPSSRNLISWTSMVYGYAMSWEVLKARELF 351
             A + +   SL DMY +CG L +A +VF+Q                             
Sbjct: 300 ELAGNAIAGCSLCDMYARCGFLNSARRVFDQ----------------------------- 359

Query: 352 NEMPERNVISWNAMLAGYIHSAQWEEALDFVHLMRSSIKDTDHVTIRLILNVCTGLLDVE 411
             +   +  SWN ++AG  ++   +EA+     MRSS    D +++R +L   T  + + 
Sbjct: 360 --IERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALS 419

Query: 412 RGKQVHGFVYRIGFYSNLFIGNGLLDMYGKCGNLKSARVWFYQMSQWRDGVSWNAILTTY 471
           +G Q+H ++ + GF ++L + N LL MY  C +L      F       D VSWN ILT  
Sbjct: 420 QGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTAC 479

Query: 472 ARHGMSEQAMTIFSEM-QWETAPSKYTFATLLGACANTLALGQGKQIHGFMIRNNYEIDI 531
            +H    + + +F  M   E  P   T   LL  C    +L  G Q+H + ++     + 
Sbjct: 480 LQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQ 539

Query: 532 VVNGALVDMYCKCRELEYALKIFENAASRDVILWNSIILGCCHNRRSSIVIELFQWMTME 591
            +   L+DMY KC  L  A +IF++  +RDV+ W+++I+G   +      + LF+ M   
Sbjct: 540 FIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEM-KS 599

Query: 592 EDIRPDHVTFQGILLACVYENLVELGRQCFDSMSDKFCIIPRLEHYECMIELYGRHGNMD 651
             I P+HVTF G+L AC +  LVE G + + +M  +  I P  EH  C+++L  R G ++
Sbjct: 600 AGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLN 659

Query: 652 ELENFVNNMPFDPTVPMLERILDACRKHGNSRLEERVA 688
           E E F++ M  +P V + + +L AC+  GN  L ++ A
Sbjct: 660 EAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAA 665

[Close]
BLAST of Sed0003350.1 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 7.9e-89
Identity = 196/666 (29.43%), Postives = 343/666 (51.50%), Query Frame = 0 

Query: 30  ATTAILKYLKAGRLRKAVSVL-FDSPFPFPHPLYARLFQICSSNRALLEARKVESHLVTF 89
           A T + ++ ++G L  AV +L     +         + Q+C+ +++L + ++V++ +   
Sbjct: 64  ANTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGN 123

Query: 90  CPTPPIFLLNRAIEAYGKCGCLVDARELFDEMPHRDGGSWNAMLTAYSQNGYGFEALNLF 149
                  L ++    Y  CG L +A  +FDE+       WN ++   +++G    ++ LF
Sbjct: 124 GFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLF 183

Query: 150 LVMNRFGVYATKITLASVLGSCGAALALHFSRQIHGRIVKSGFVGNVILESSLVDVYGKC 209
             M   GV     T + V  S  +  ++H   Q+HG I+KSGF     + +SLV  Y K 
Sbjct: 184 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 243

Query: 210 RVMKDARRMFDEMQSRNDVSWNVIVRRYLEVDNGKEAVSMFFQMFREAMMPLSFTFSNAL 269
           + +  AR++FDEM  R+ +SWN I+  Y+     ++ +S+F QM    +     T  +  
Sbjct: 244 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 303

Query: 270 IACSSMTALIEGRQIHGVVVKVGFAEDEVISSSLIDMYIKCGRLENAHQVFNQPSSRNLI 329
             C+    +  GR +H + VK  F+ ++   ++L+DMY KCG L++A  VF + S R+++
Sbjct: 304 AGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVV 363

Query: 330 SWTSMVYGYAMSWEVLKARELFNEMPERNVISWNAMLAGYIHSAQWEEALDFVHLMRSSI 389
           S+TSM+ GYA      +A +LF EM E  +                              
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGI------------------------------ 423

Query: 390 KDTDHVTIRLILNVCTGLLDVERGKQVHGFVYRIGFYSNLFIGNGLLDMYGKCGNLKSAR 449
              D  T+  +LN C     ++ GK+VH ++       ++F+ N L+DMY KCG+++ A 
Sbjct: 424 -SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 483

Query: 450 VWFYQMSQWRDGVSWNAILTTYARHGMSEQAMTIFSEMQWET--APSKYTFATLLGACAN 509
           + F +M + +D +SWN I+  Y+++  + +A+++F+ +  E   +P + T A +L ACA+
Sbjct: 484 LVFSEM-RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 543

Query: 510 TLALGQGKQIHGFMIRNNYEIDIVVNGALVDMYCKCRELEYALKIFENAASRDVILWNSI 569
             A  +G++IHG+++RN Y  D  V  +LVDMY KC  L  A  +F++ AS+D++ W  +
Sbjct: 544 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVM 603

Query: 570 ILGCCHNRRSSIVIELFQWMTMEEDIRPDHVTFQGILLACVYENLVELGRQCFDSMSDKF 629
           I G   +      I LF  M  +  I  D ++F  +L AC +  LV+ G + F+ M  + 
Sbjct: 604 IAGYGMHGFGKEAIALFNQM-RQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 663

Query: 630 CIIPRLEHYECMIELYGRHGNMDELENFVNNMPFDPTVPMLERILDACRKHGNSRLEERV 689
            I P +EHY C++++  R G++ +   F+ NMP  P   +   +L  CR H + +L E+V
Sbjct: 664 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKV 696

Query: 690 AVKLDE 693
           A K+ E
Sbjct: 724 AEKVFE 696

[Close]
BLAST of Sed0003350.1 vs. ExPASy Swiss-Prot
Match: P93005 (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E19 PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.8e-88
Identity = 190/627 (30.30%), Postives = 320/627 (51.04%), Query Frame = 0 

Query: 70  SSNRALLEARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLVDARELFDEMPHRDGGSWN 129
           S  R L+  R V   ++    +  I   N  +  Y KCG L  A  +F+ +  +D  SWN
Sbjct: 25  SQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWN 84

Query: 130 AMLTAYSQNG---YGFEALNLFLVMNRFGVYATKITLASVLGSCGAALALHFSRQIHGRI 189
           +++T YSQNG     +  + LF  M    +     TLA +  +  +  +    RQ H  +
Sbjct: 85  SLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALV 144

Query: 190 VKSGFVGNVILESSLVDVYGKCRVMKDARRMFDEMQSRNDVSWNVIVRRYLEVDNGKEAV 249
           VK    G++ +++SLV +Y K  +++D  ++F  M  RN  +W+ +V  Y      +EA+
Sbjct: 145 VKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAI 204

Query: 250 SMF--FQMFREAMMPLSFTFSNALIACSSMTALIEGRQIHGVVVKVGFAEDEVISSSLID 309
            +F  F   +E      + F+  L + ++   +  GRQIH + +K G      +S++L+ 
Sbjct: 205 KVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVT 264

Query: 310 MYIKCGRLENAHQVFNQPSSRNLISWTSMVYGYAMSWEVLKARELFNEMPERNVISWNAM 369
           MY KC  L  A ++F+    RN I+W++MV GY+ + E L+A +LF+ M           
Sbjct: 265 MYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRM----------- 324

Query: 370 LAGYIHSAQWEEALDFVHLMRSSIKDTDHVTIRLILNVCTGLLDVERGKQVHGFVYRIGF 429
                                + IK +++ TI  +LN C+ +  +E GKQ+H F+ ++GF
Sbjct: 325 -------------------FSAGIKPSEY-TIVGVLNACSDICYLEEGKQLHSFLLKLGF 384

Query: 430 YSNLFIGNGLLDMYGKCGNLKSARVWFYQMSQWRDGVSWNAILTTYARHGMSEQAMTIFS 489
             +LF    L+DMY K G L  AR  F    Q RD   W ++++ Y ++  +E+A+ ++ 
Sbjct: 385 ERHLFATTALVDMYAKAGCLADARKGF-DCLQERDVALWTSLISGYVQNSDNEEALILYR 444

Query: 490 EMQWE-TAPSKYTFATLLGACANTLALGQGKQIHGFMIRNNYEIDIVVNGALVDMYCKCR 549
            M+     P+  T A++L AC++   L  GKQ+HG  I++ + +++ +  AL  MY KC 
Sbjct: 445 RMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCG 504

Query: 550 ELEYALKIFENAASRDVILWNSIILGCCHNRRSSIVIELFQWMTMEEDIRPDHVTFQGIL 609
            LE    +F    ++DV+ WN++I G  HN +    +ELF+ M + E + PD VTF  I+
Sbjct: 505 SLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEM-LAEGMEPDDVTFVNII 564

Query: 610 LACVYENLVELGRQCFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFVNNMPFDPT 669
            AC ++  VE G   F+ MSD+  + P+++HY CM++L  R G + E + F+ +   D  
Sbjct: 565 SACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHG 618

Query: 670 VPMLERILDACRKHGNSRLEERVAVKL 691
           + +   +L AC+ HG   L      KL
Sbjct: 625 LCLWRILLSACKNHGKCELGVYAGEKL 618

[Close]
BLAST of Sed0003350.1 vs. ExPASy TrEMBL
Match: A0A6J1K1B7 (pentatricopeptide repeat-containing protein At3g26540 OS=Cucurbita maxima OX=3661 GN=LOC111489740 PE=4 SV=1)

HSP 1 Score: 1249.2 bits (3231), Expect = 0.0e+00
Identity = 602/695 (86.62%), Postives = 644/695 (92.66%), Query Frame = 0 

Query: 1   MAVTAASILNRLISRKNLTAGAQPDGAGAATTAILKYLKAGRLRKAVSVLFDSPFPFPHP 60
           M V+AASILNRL+S KNL+A  QP GA A  T ILKYL+ GRLRKAVSVLFDSPFPFPHP
Sbjct: 1   MGVSAASILNRLLSHKNLSARTQPTGAKAVATTILKYLEEGRLRKAVSVLFDSPFPFPHP 60

Query: 61  LYARLFQICSSNRALLEARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLVDARELFDEM 120
           LYARLFQICSS RAL+EARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLVDARELF+EM
Sbjct: 61  LYARLFQICSSTRALVEARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLVDARELFEEM 120

Query: 121 PHRDGGSWNAMLTAYSQNGYGFEALNLFLVMNRFGVYATKITLASVLGSCGAALALHFSR 180
           P RDGGSWNAM+TAY++NG+  EALNLFL MN+ GVYAT+ITLASVLGSCG+ LALH SR
Sbjct: 121 PQRDGGSWNAMITAYTKNGFALEALNLFLNMNKSGVYATEITLASVLGSCGSVLALHLSR 180

Query: 181 QIHGRIVKSGFVGNVILESSLVDVYGKCRVMKDARRMFDEMQSRNDVSWNVIVRRYLEVD 240
           Q+HG IVKSGFVGNVILESSLVDVYGKCR+M DAR MFDE+Q+RNDVSWNVIVRRYLEVD
Sbjct: 181 QVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQNRNDVSWNVIVRRYLEVD 240

Query: 241 NGKEAVSMFFQMFREAMMPLSFTFSNALIACSSMTALIEGRQIHGVVVKVGFAEDEVISS 300
           +GK AVSMFFQMFREA+MPLSFTFSNALIACSSM ALIEGRQIHG+VVKVG   DEVISS
Sbjct: 241 DGKLAVSMFFQMFREAVMPLSFTFSNALIACSSMAALIEGRQIHGIVVKVGLEGDEVISS 300

Query: 301 SLIDMYIKCGRLENAHQVFNQPSSRNLISWTSMVYGYAMSWEVLKARELFNEMPERNVIS 360
           SLIDMY+KCG LENAHQVF QPSSRNLISWTSMVYGYAMS EVLKARELFNEMPERNVIS
Sbjct: 301 SLIDMYVKCGTLENAHQVFIQPSSRNLISWTSMVYGYAMSGEVLKARELFNEMPERNVIS 360

Query: 361 WNAMLAGYIHSAQWEEALDFVHLMRSSIKDTDHVTIRLILNVCTGLLDVERGKQVHGFVY 420
           WNAMLAGYIHS QWEEALDFVHLM +SIKD DHVT+RLILNVCTGLLDVERGKQVHGF+Y
Sbjct: 361 WNAMLAGYIHSGQWEEALDFVHLMHNSIKDVDHVTLRLILNVCTGLLDVERGKQVHGFIY 420

Query: 421 RIGFYSNLFIGNGLLDMYGKCGNLKSARVWFYQMSQWRDGVSWNAILTTYARHGMSEQAM 480
           RIGFY+NL+IGN LLDMYGKCGNLKSARVWFYQMSQWRD VSWNA+LTTYARHGMSEQAM
Sbjct: 421 RIGFYANLYIGNALLDMYGKCGNLKSARVWFYQMSQWRDEVSWNALLTTYARHGMSEQAM 480

Query: 481 TIFSEMQWETAPSKYTFATLLGACANTLALGQGKQIHGFMIRNNYEIDIVVNGALVDMYC 540
           TIFSEMQWE APSK+TFATLL ACANT AL QGKQIHGFM+RNNYEIDI V+GALVDMYC
Sbjct: 481 TIFSEMQWEAAPSKFTFATLLAACANTFALDQGKQIHGFMVRNNYEIDIAVSGALVDMYC 540

Query: 541 KCRELEYALKIFENAASRDVILWNSIILGCCHNRRSSIVIELFQWMTMEEDIRPDHVTFQ 600
           KCR+LEYALK+FENAASRDV+LWNSIILGCCHNRR  IVIELFQ M ME+ I PDHVTFQ
Sbjct: 541 KCRQLEYALKVFENAASRDVVLWNSIILGCCHNRRGMIVIELFQMMMMEKGINPDHVTFQ 600

Query: 601 GILLACVYENLVELGRQCFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFVNNMPF 660
           GILLACVYENLVELGRQ FDSMSDKFCIIPRLEHYECMIELYGRHGNMDELE F+ NMPF
Sbjct: 601 GILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELEKFIINMPF 660

Query: 661 DPTVPMLERILDACRKHGNSRLEERVAVKLDEQTI 696
           DPTVPMLE++LDACRKHG+SRL E VA++L+EQ +
Sbjct: 661 DPTVPMLEKVLDACRKHGHSRLGEWVAIRLNEQNL 695

[Close]
BLAST of Sed0003350.1 vs. ExPASy TrEMBL
Match: A0A6J1FD79 (pentatricopeptide repeat-containing protein At3g26540 OS=Cucurbita moschata OX=3662 GN=LOC111444693 PE=4 SV=1)

HSP 1 Score: 1245.7 bits (3222), Expect = 0.0e+00
Identity = 598/695 (86.04%), Postives = 643/695 (92.52%), Query Frame = 0 

Query: 1   MAVTAASILNRLISRKNLTAGAQPDGAGAATTAILKYLKAGRLRKAVSVLFDSPFPFPHP 60
           M V+AASILNRL+S KNL+A  QP GA AA T ILKYL+ GRLRKAVSVLFDSPFPFPHP
Sbjct: 1   MGVSAASILNRLLSHKNLSARTQPTGAKAAATTILKYLEEGRLRKAVSVLFDSPFPFPHP 60

Query: 61  LYARLFQICSSNRALLEARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLVDARELFDEM 120
           LYARLFQICSS RAL+EARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCL DARELF+EM
Sbjct: 61  LYARLFQICSSTRALVEARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLEDARELFEEM 120

Query: 121 PHRDGGSWNAMLTAYSQNGYGFEALNLFLVMNRFGVYATKITLASVLGSCGAALALHFSR 180
           P RDGGSWNAMLTAY+QNG+  E+LNLFL MN+ GVYAT+ITLASVLGSCG+ LALH SR
Sbjct: 121 PQRDGGSWNAMLTAYTQNGFALESLNLFLNMNKSGVYATEITLASVLGSCGSVLALHLSR 180

Query: 181 QIHGRIVKSGFVGNVILESSLVDVYGKCRVMKDARRMFDEMQSRNDVSWNVIVRRYLEVD 240
           Q+HG IVKSGFVGNVILESSLVDVYGKCR+M DAR MFDE+Q+RNDVSWNVIVRRYLEV 
Sbjct: 181 QVHGHIVKSGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQNRNDVSWNVIVRRYLEVG 240

Query: 241 NGKEAVSMFFQMFREAMMPLSFTFSNALIACSSMTALIEGRQIHGVVVKVGFAEDEVISS 300
           +GK AVSMFFQMFREA+MPLSFTFSNALIACSSM ALIEGRQIHG+VVKVG  EDEVISS
Sbjct: 241 DGKMAVSMFFQMFREAVMPLSFTFSNALIACSSMAALIEGRQIHGIVVKVGLEEDEVISS 300

Query: 301 SLIDMYIKCGRLENAHQVFNQPSSRNLISWTSMVYGYAMSWEVLKARELFNEMPERNVIS 360
           SLIDMY+KCG L+NAHQVF QPSSRNLISWTSMVYGYAMS EVLKARELFNEMPERNVIS
Sbjct: 301 SLIDMYVKCGTLDNAHQVFTQPSSRNLISWTSMVYGYAMSGEVLKARELFNEMPERNVIS 360

Query: 361 WNAMLAGYIHSAQWEEALDFVHLMRSSIKDTDHVTIRLILNVCTGLLDVERGKQVHGFVY 420
           WNAMLAGYIHS QW+EALDFVHLM +SIKD DHVT+RLILNVCTGLLDVERGKQVHGF+Y
Sbjct: 361 WNAMLAGYIHSGQWKEALDFVHLMHNSIKDVDHVTLRLILNVCTGLLDVERGKQVHGFIY 420

Query: 421 RIGFYSNLFIGNGLLDMYGKCGNLKSARVWFYQMSQWRDGVSWNAILTTYARHGMSEQAM 480
           RIGFY+NL+IGN LLDMYGKCGNLKSARVWFYQMSQWRD VSWNA+LTTYARHGMSEQAM
Sbjct: 421 RIGFYANLYIGNALLDMYGKCGNLKSARVWFYQMSQWRDKVSWNALLTTYARHGMSEQAM 480

Query: 481 TIFSEMQWETAPSKYTFATLLGACANTLALGQGKQIHGFMIRNNYEIDIVVNGALVDMYC 540
           TIFSEMQWE APSK+TFATLL ACANT AL QGKQIHGFM+RNNYEID+ V+GALVDMYC
Sbjct: 481 TIFSEMQWEAAPSKFTFATLLAACANTFALDQGKQIHGFMVRNNYEIDVAVSGALVDMYC 540

Query: 541 KCRELEYALKIFENAASRDVILWNSIILGCCHNRRSSIVIELFQWMTMEEDIRPDHVTFQ 600
           KCR+LEYALK+FENAASRDV+LWNSIILGCCHNRR  IVIELF+ M ME+ I PDHVTFQ
Sbjct: 541 KCRQLEYALKVFENAASRDVVLWNSIILGCCHNRRGMIVIELFEMMMMEKGINPDHVTFQ 600

Query: 601 GILLACVYENLVELGRQCFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFVNNMPF 660
           GILLACVYENLVELGRQ FDSM DKFCIIPRLEHYEC+IELYGRHGNMDELE F+NNMPF
Sbjct: 601 GILLACVYENLVELGRQYFDSMIDKFCIIPRLEHYECVIELYGRHGNMDELEKFINNMPF 660

Query: 661 DPTVPMLERILDACRKHGNSRLEERVAVKLDEQTI 696
           DPTVPMLE++LDACRKHG+SRL E VA++L EQ +
Sbjct: 661 DPTVPMLEKVLDACRKHGHSRLGEWVAIRLKEQNL 695

[Close]
BLAST of Sed0003350.1 vs. ExPASy TrEMBL
Match: A0A6J1CJX1 (pentatricopeptide repeat-containing protein At3g26540-like OS=Momordica charantia OX=3673 GN=LOC111011852 PE=4 SV=1)

HSP 1 Score: 1234.6 bits (3193), Expect = 0.0e+00
Identity = 595/695 (85.61%), Postives = 645/695 (92.81%), Query Frame = 0 

Query: 1   MAVTAASILNRLISRKNLTAGAQPDGAGAATTAILKYLKAGRLRKAVSVLFDSPFPFPHP 60
           M VTAASILNRL+SRKNL+A  +P G   ATT IL +LK GRLRKAVS LFDSPFPFPHP
Sbjct: 1   MGVTAASILNRLLSRKNLSAKIEPTG-DEATTTILNHLKEGRLRKAVSFLFDSPFPFPHP 60

Query: 61  LYARLFQICSSNRALLEARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLVDARELFDEM 120
           LYARLFQICSS RAL+EARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCL DARELF+EM
Sbjct: 61  LYARLFQICSSTRALVEARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLEDARELFEEM 120

Query: 121 PHRDGGSWNAMLTAYSQNGYGFEALNLFLVMNRFGVYATKITLASVLGSCGAALALHFSR 180
           P RDGGSWNAM+TAY+QNGY  EAL LF  MN+ GV AT+ITLAS+LGSCG ALALHFSR
Sbjct: 121 PQRDGGSWNAMITAYTQNGYALEALYLFSDMNKSGVRATEITLASILGSCGVALALHFSR 180

Query: 181 QIHGRIVKSGFVGNVILESSLVDVYGKCRVMKDARRMFDEMQSRNDVSWNVIVRRYLEVD 240
           QIHG IVKSGF+GNVILESSLVDVYGKCR+M DAR MFDE+Q+RNDVSWNVIVRRYLEV 
Sbjct: 181 QIHGHIVKSGFLGNVILESSLVDVYGKCRLMNDARSMFDEIQNRNDVSWNVIVRRYLEVG 240

Query: 241 NGKEAVSMFFQMFREAMMPLSFTFSNALIACSSMTALIEGRQIHGVVVKVGFAEDEVISS 300
           NGKEAVSMF+QMFREA+MPLSFTFSNALIACSSM AL++G QIHGVVVKVGF ED+VISS
Sbjct: 241 NGKEAVSMFYQMFREAVMPLSFTFSNALIACSSMAALVQGMQIHGVVVKVGFEEDDVISS 300

Query: 301 SLIDMYIKCGRLENAHQVFNQPSSRNLISWTSMVYGYAMSWEVLKARELFNEMPERNVIS 360
           SLIDMY+KCG LENAHQVFNQP+S NLISWTSM+YGYAMS EV KARELFNEMPERNVIS
Sbjct: 301 SLIDMYVKCGTLENAHQVFNQPNSSNLISWTSMLYGYAMSGEVPKARELFNEMPERNVIS 360

Query: 361 WNAMLAGYIHSAQWEEALDFVHLMRSSIKDTDHVTIRLILNVCTGLLDVERGKQVHGFVY 420
           WNAMLAGY+HSAQWEEALDFVHLMRSSIK+ DHVT+RLILNVCTGLLDV RGKQVHGFVY
Sbjct: 361 WNAMLAGYVHSAQWEEALDFVHLMRSSIKEIDHVTLRLILNVCTGLLDVARGKQVHGFVY 420

Query: 421 RIGFYSNLFIGNGLLDMYGKCGNLKSARVWFYQMSQWRDGVSWNAILTTYARHGMSEQAM 480
           RIGFY+NL+IGN LLDMYGKCG+LKSAR+WFYQMSQWRD VSWNA+LT+YARHGMSEQAM
Sbjct: 421 RIGFYANLYIGNALLDMYGKCGSLKSARLWFYQMSQWRDDVSWNALLTSYARHGMSEQAM 480

Query: 481 TIFSEMQWETAPSKYTFATLLGACANTLALGQGKQIHGFMIRNNYEIDIVVNGALVDMYC 540
           TIF+EMQWETAPSK+TFATLLGACANT A+ QGKQIHGFM+RNNYEIDIVV+GALVDMYC
Sbjct: 481 TIFAEMQWETAPSKFTFATLLGACANTFAIEQGKQIHGFMVRNNYEIDIVVSGALVDMYC 540

Query: 541 KCRELEYALKIFENAASRDVILWNSIILGCCHNRRSSIVIELFQWMTMEEDIRPDHVTFQ 600
           KCR++EYALK+FEN ASRDVILWNSIILGCCHNRR  IVIELF+ M MEE ++PDHVTFQ
Sbjct: 541 KCRKVEYALKVFENVASRDVILWNSIILGCCHNRRGMIVIELFRLMVMEEGLKPDHVTFQ 600

Query: 601 GILLACVYENLVELGRQCFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFVNNMPF 660
           GILLACVYENLVELGRQ FDSMSDKFCIIPRLEHYECMIELYGRHG MDELENF+NNMPF
Sbjct: 601 GILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGTMDELENFINNMPF 660

Query: 661 DPTVPMLERILDACRKHGNSRLEERVAVKLDEQTI 696
           DPTVPMLERIL+ACRKHGNS+L E VAV+L+E+ +
Sbjct: 661 DPTVPMLERILEACRKHGNSKLGEWVAVRLNERNL 694

[Close]
BLAST of Sed0003350.1 vs. ExPASy TrEMBL
Match: A0A5D3DJG9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G001110 PE=4 SV=1)

HSP 1 Score: 1175.6 bits (3040), Expect = 0.0e+00
Identity = 565/693 (81.53%), Postives = 622/693 (89.75%), Query Frame = 0 

Query: 1   MAVTAASILNRLISRKNLTAGAQPDGAGAATTAILKYLKAGRLRKAVSVLFDSPFPFPHP 60
           M V+AASILNRL+S KNLTA  +   A AAT+ IL+YL+ GRL KAV +LF+SPFPFPH 
Sbjct: 1   MGVSAASILNRLLSAKNLTARREFTDANAATSTILRYLEKGRLGKAVLILFNSPFPFPHT 60

Query: 61  LYARLFQICSSNRALLEARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLVDARELFDEM 120
           LY RLFQ+CSS RAL+EARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCL DARELFDEM
Sbjct: 61  LYTRLFQLCSSTRALVEARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLKDARELFDEM 120

Query: 121 PHRDGGSWNAMLTAYSQNGYGFEALNLFLVMNRFGVYATKITLASVLGSCGAALALHFSR 180
           P RDGGSWNAM+TAY+QNGY  EALNL+L + + GVYAT+ITLAS+L SCG+ LALHFSR
Sbjct: 121 PQRDGGSWNAMITAYTQNGYALEALNLYLDLKKSGVYATEITLASILRSCGSVLALHFSR 180

Query: 181 QIHGRIVKSGFVGNVILESSLVDVYGKCRVMKDARRMFDEMQSRNDVSWNVIVRRYLEVD 240
           QIHG IVK GFVGNVILESSLVDVYGKC +M DAR MFDE+Q+RNDVSWNVIVRRYLEV 
Sbjct: 181 QIHGHIVKCGFVGNVILESSLVDVYGKCGLMNDARSMFDEIQNRNDVSWNVIVRRYLEVG 240

Query: 241 NGKEAVSMFFQMFREAMMPLSFTFSNALIACSSMTALIEGRQIHGVVVKVGFAEDEVISS 300
           NGKEAVSMFFQMFREA+MP SFTFSNALIACS M ALIEGRQIHG+VVKVG  E+EVISS
Sbjct: 241 NGKEAVSMFFQMFREALMPSSFTFSNALIACSRMAALIEGRQIHGIVVKVGLEENEVISS 300

Query: 301 SLIDMYIKCGRLENAHQVFNQPSSRNLISWTSMVYGYAMSWEVLKARELFNEMPERNVIS 360
           SLIDMY+KCG L NAHQVF QPSSRNLISWTSMVY YA S +VLKARELFNEMPERNVIS
Sbjct: 301 SLIDMYVKCGTLANAHQVFTQPSSRNLISWTSMVYAYATSGDVLKARELFNEMPERNVIS 360

Query: 361 WNAMLAGYIHSAQWEEALDFVHLMRSSIKDTDHVTIRLILNVCTGLLDVERGKQVHGFVY 420
           WNAMLAGYIHS+QWEEAL+FVHLMRSSIKD D  T+ LILNVCTG+ DVERGKQVHGFVY
Sbjct: 361 WNAMLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGISDVERGKQVHGFVY 420

Query: 421 RIGFYSNLFIGNGLLDMYGKCGNLKSARVWFYQMSQWRDGVSWNAILTTYARHGMSEQAM 480
           R GFY+NL+IGN LLDMYGKCGNLKSA+VWFYQMSQWRD VSWNA+LT YARHGMSEQAM
Sbjct: 421 RTGFYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAYARHGMSEQAM 480

Query: 481 TIFSEMQWETAPSKYTFATLLGACANTLALGQGKQIHGFMIRNNYEIDIVVNGALVDMYC 540
           T FSEMQ ET P+ +TFATLLGACAN  AL QGKQIHGFM+RNNY IDIV+ GALVDMYC
Sbjct: 481 TSFSEMQLETDPNSFTFATLLGACANMFALEQGKQIHGFMVRNNYAIDIVLTGALVDMYC 540

Query: 541 KCRELEYALKIFENAASRDVILWNSIILGCCHNRRSSIVIELFQWMTMEEDIRPDHVTFQ 600
           KCRELEYALK+FE+ ASRDV+LWNSIILGCCHNRR  + IELFQ MTMEE I+PDHVTFQ
Sbjct: 541 KCRELEYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIELFQSMTMEEGIKPDHVTFQ 600

Query: 601 GILLACVYENLVELGRQCFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFVNNMPF 660
           G+LLAC++ENL+ELGR+ FDSMS+KFCIIPRLEHYECM+ELYG+HGNMDELE F+NNMPF
Sbjct: 601 GVLLACLHENLIELGRKYFDSMSEKFCIIPRLEHYECMVELYGQHGNMDELEKFINNMPF 660

Query: 661 DPTVPMLERILDACRKHGNSRLEERVAVKLDEQ 694
           DPTVPMLERI +ACR+HG+S L E VAV+L+EQ
Sbjct: 661 DPTVPMLERIFNACREHGHSSLAEWVAVRLNEQ 693

[Close]
BLAST of Sed0003350.1 vs. ExPASy TrEMBL
Match: A0A1S3B4H5 (pentatricopeptide repeat-containing protein At3g26540 OS=Cucumis melo OX=3656 GN=LOC103485666 PE=4 SV=1)

HSP 1 Score: 1175.6 bits (3040), Expect = 0.0e+00
Identity = 565/693 (81.53%), Postives = 622/693 (89.75%), Query Frame = 0 

Query: 1   MAVTAASILNRLISRKNLTAGAQPDGAGAATTAILKYLKAGRLRKAVSVLFDSPFPFPHP 60
           M V+AASILNRL+S KNLTA  +   A AAT+ IL+YL+ GRL KAV +LF+SPFPFPH 
Sbjct: 1   MGVSAASILNRLLSAKNLTARREFTDANAATSTILRYLEKGRLGKAVLILFNSPFPFPHT 60

Query: 61  LYARLFQICSSNRALLEARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLVDARELFDEM 120
           LY RLFQ+CSS RAL+EARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCL DARELFDEM
Sbjct: 61  LYTRLFQLCSSTRALVEARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLKDARELFDEM 120

Query: 121 PHRDGGSWNAMLTAYSQNGYGFEALNLFLVMNRFGVYATKITLASVLGSCGAALALHFSR 180
           P RDGGSWNAM+TAY+QNGY  EALNL+L + + GVYAT+ITLAS+L SCG+ LALHFSR
Sbjct: 121 PQRDGGSWNAMITAYTQNGYALEALNLYLDLKKSGVYATEITLASILRSCGSVLALHFSR 180

Query: 181 QIHGRIVKSGFVGNVILESSLVDVYGKCRVMKDARRMFDEMQSRNDVSWNVIVRRYLEVD 240
           QIHG IVK GFVGNVILESSLVDVYGKC +M DAR MFDE+Q+RNDVSWNVIVRRYLEV 
Sbjct: 181 QIHGHIVKCGFVGNVILESSLVDVYGKCGLMNDARSMFDEIQNRNDVSWNVIVRRYLEVG 240

Query: 241 NGKEAVSMFFQMFREAMMPLSFTFSNALIACSSMTALIEGRQIHGVVVKVGFAEDEVISS 300
           NGKEAVSMFFQMFREA+MP SFTFSNALIACS M ALIEGRQIHG+VVKVG  E+EVISS
Sbjct: 241 NGKEAVSMFFQMFREALMPSSFTFSNALIACSRMAALIEGRQIHGIVVKVGLEENEVISS 300

Query: 301 SLIDMYIKCGRLENAHQVFNQPSSRNLISWTSMVYGYAMSWEVLKARELFNEMPERNVIS 360
           SLIDMY+KCG L NAHQVF QPSSRNLISWTSMVY YA S +VLKARELFNEMPERNVIS
Sbjct: 301 SLIDMYVKCGTLANAHQVFTQPSSRNLISWTSMVYAYATSGDVLKARELFNEMPERNVIS 360

Query: 361 WNAMLAGYIHSAQWEEALDFVHLMRSSIKDTDHVTIRLILNVCTGLLDVERGKQVHGFVY 420
           WNAMLAGYIHS+QWEEAL+FVHLMRSSIKD D  T+ LILNVCTG+ DVERGKQVHGFVY
Sbjct: 361 WNAMLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGISDVERGKQVHGFVY 420

Query: 421 RIGFYSNLFIGNGLLDMYGKCGNLKSARVWFYQMSQWRDGVSWNAILTTYARHGMSEQAM 480
           R GFY+NL+IGN LLDMYGKCGNLKSA+VWFYQMSQWRD VSWNA+LT YARHGMSEQAM
Sbjct: 421 RTGFYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAYARHGMSEQAM 480

Query: 481 TIFSEMQWETAPSKYTFATLLGACANTLALGQGKQIHGFMIRNNYEIDIVVNGALVDMYC 540
           T FSEMQ ET P+ +TFATLLGACAN  AL QGKQIHGFM+RNNY IDIV+ GALVDMYC
Sbjct: 481 TSFSEMQLETDPNSFTFATLLGACANMFALEQGKQIHGFMVRNNYAIDIVLTGALVDMYC 540

Query: 541 KCRELEYALKIFENAASRDVILWNSIILGCCHNRRSSIVIELFQWMTMEEDIRPDHVTFQ 600
           KCRELEYALK+FE+ ASRDV+LWNSIILGCCHNRR  + IELFQ MTMEE I+PDHVTFQ
Sbjct: 541 KCRELEYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIELFQSMTMEEGIKPDHVTFQ 600

Query: 601 GILLACVYENLVELGRQCFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFVNNMPF 660
           G+LLAC++ENL+ELGR+ FDSMS+KFCIIPRLEHYECM+ELYG+HGNMDELE F+NNMPF
Sbjct: 601 GVLLACLHENLIELGRKYFDSMSEKFCIIPRLEHYECMVELYGQHGNMDELEKFINNMPF 660

Query: 661 DPTVPMLERILDACRKHGNSRLEERVAVKLDEQ 694
           DPTVPMLERI +ACR+HG+S L E VAV+L+EQ
Sbjct: 661 DPTVPMLERIFNACREHGHSSLAEWVAVRLNEQ 693

[Close]
BLAST of Sed0003350.1 vs. TAIR 10
Match: AT3G26540.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 779.2 bits (2011), Expect = 2.7e-225
Identity = 382/660 (57.88%), Postives = 488/660 (73.94%), Query Frame = 0 

Query: 31  TTAILKYLKAGRLRKAVSVLFDSPFPFPHPLYARLFQICSSNRALLEARKVESHLVTFCP 90
           T  IL++L+ G + KAVSVLF SP P  + LY RLF+ CSS   +++ARKV+SHLVTF P
Sbjct: 33  TRQILEHLEGGNVSKAVSVLFASPEPVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSP 92

Query: 91  TPPIFLLNRAIEAYGKCGCLVDARELFDEMPHRDGGSWNAMLTAYSQNGYGFEALNLFLV 150
            PPIFLLNRAIEAYGKCGC+ DARELF+EMP RDGGSWNA++TA +QNG   E   +F  
Sbjct: 93  LPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRR 152

Query: 151 MNRFGVYATKITLASVLGSCGAALALHFSRQIHGRIVKSGFVGNVILESSLVDVYGKCRV 210
           MNR GV AT+ + A VL SCG  L L   RQ+H  +VK G+ GNV LE+S+VDVYGKCRV
Sbjct: 153 MNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRV 212

Query: 211 MKDARRMFDEMQSRNDVSWNVIVRRYLEVDNGKEAVSMFFQMFREAMMPLSFTFSNALIA 270
           M DARR+FDE+ + +DVSWNVIVRRYLE+    EAV MFF+M    + PL+ T S+ ++A
Sbjct: 213 MSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLA 272

Query: 271 CSSMTALIEGRQIHGVVVKVGFAEDEVISSSLIDMYIKCGRLENAHQVFNQPSSRNLISW 330
           CS   AL  G+ IH + VK+    D V+S+S+ DMY+KC RLE+A +VF+Q  S++L SW
Sbjct: 273 CSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSW 332

Query: 331 TSMVYGYAMSWEVLKARELFNEMPERNVISWNAMLAGYIHSAQWEEALDFVHLMRSSIKD 390
           TS + GYAMS    +ARELF+ MPERN++SWNAML GY+H+ +W+EALDF+ LMR  I++
Sbjct: 333 TSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIEN 392

Query: 391 TDHVTIRLILNVCTGLLDVERGKQVHGFVYRIGFYSNLFIGNGLLDMYGKCGNLKSARVW 450
            D+VT+  ILNVC+G+ DV+ GKQ HGF+YR G+ +N+ + N LLDMYGKCG L+SA +W
Sbjct: 393 IDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIW 452

Query: 451 FYQMSQWRDGVSWNAILTTYARHGMSEQAMTIFSEMQWETAPSKYTFATLLGACANTLAL 510
           F QMS+ RD VSWNA+LT  AR G SEQA++ F  MQ E  PSKYT ATLL  CAN  AL
Sbjct: 453 FRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPSKYTLATLLAGCANIPAL 512

Query: 511 GQGKQIHGFMIRNNYEIDIVVNGALVDMYCKCRELEYALKIFENAASRDVILWNSIILGC 570
             GK IHGF+IR+ Y+ID+V+ GA+VDMY KCR  +YA+++F+ AA+RD+ILWNSII GC
Sbjct: 513 NLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGC 572

Query: 571 CHNRRSSIVIELFQWMTMEEDIRPDHVTFQGILLACVYENLVELGRQCFDSMSDKFCIIP 630
           C N RS  V ELF  +   E ++PDHVTF GIL AC+ E  VELG Q F SMS K+ I P
Sbjct: 573 CRNGRSKEVFELFM-LLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISP 632

Query: 631 RLEHYECMIELYGRHGNMDELENFVNNMPFDPTVPMLERILDACRKHGNSRLEERVAVKL 690
           ++EHY+CMIELY ++G + +LE F+  MPFDP + ML RI DAC+++  S+L    A +L
Sbjct: 633 QVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRL 691

[Close]
BLAST of Sed0003350.1 vs. TAIR 10
Match: AT3G03580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 340.9 bits (873), Expect = 2.4e-93
Identity = 190/600 (31.67%), Postives = 312/600 (52.00%), Query Frame = 0 

Query: 94  IFLLNRAIEAYGKCGCLVDARELFDEMPHRDGGSWNAMLTAYSQNGYGFEALNLFLVMNR 153
           +F+ N  ++ Y + G L  AR++FDEMP RD  SWN++++ YS +GY  EAL ++  +  
Sbjct: 141 LFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKN 200

Query: 154 FGVYATKITLASVLGSCGAALALHFSRQIHGRIVKSGFVGNVILESSLVDVYGKCRVMKD 213
             +     T++SVL + G  L +   + +HG  +KSG    V++ + LV +Y K R   D
Sbjct: 201 SWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTD 260

Query: 214 ARRMFDEMQSRNDVSWNVIVRRYLEVDNGKEAVSMFFQMFREAMMPLSFTFSNALIACSS 273
           ARR+FDEM  R+ VS+N ++  YL+++  +E+V MF +   +   P   T S+ L AC  
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGH 320

Query: 274 MTALIEGRQIHGVVVKVGFAEDEVISSSLIDMYIKCGRLENAHQVFNQPSSRNLISWTSM 333
           +  L   + I+  ++K GF  +  + + LID+Y KCG                       
Sbjct: 321 LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCG----------------------- 380

Query: 334 VYGYAMSWEVLKARELFNEMPERNVISWNAMLAGYIHSAQWEEALDFVHLMRSSIKDTDH 393
                   +++ AR++FN M  ++ +SWN++++GYI S    EA+    +M    +  DH
Sbjct: 381 --------DMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADH 440

Query: 394 VTIRLILNVCTGLLDVERGKQVHGFVYRIGFYSNLFIGNGLLDMYGKCGNLKSARVWFYQ 453
           +T  ++++V T L D++ GK +H    + G   +L + N L+DMY KCG +  +   F  
Sbjct: 441 ITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSS 500

Query: 454 MSQWRDGVSWNAILTTYARHGMSEQAMTIFSEM-QWETAPSKYTFATLLGACANTLALGQ 513
           M    D V+WN +++   R G     + + ++M + E  P   TF   L  CA+  A   
Sbjct: 501 MGT-GDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRL 560

Query: 514 GKQIHGFMIRNNYEIDIVVNGALVDMYCKCRELEYALKIFENAASRDVILWNSIILGCCH 573
           GK+IH  ++R  YE ++ +  AL++MY KC  LE + ++FE  + RDV+ W  +I     
Sbjct: 561 GKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGM 620

Query: 574 NRRSSIVIELFQWMTMEEDIRPDHVTFQGILLACVYENLVELGRQCFDSMSDKFCIIPRL 633
                  +E F  M  +  I PD V F  I+ AC +  LV+ G  CF+ M   + I P +
Sbjct: 621 YGEGEKALETFADME-KSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMI 680

Query: 634 EHYECMIELYGRHGNMDELENFVNNMPFDPTVPMLERILDACRKHGNSRLEERVAVKLDE 693
           EHY C+++L  R   + + E F+  MP  P   +   +L ACR  G+    ERV+ ++ E
Sbjct: 681 EHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIE 706

[Close]
BLAST of Sed0003350.1 vs. TAIR 10
Match: AT3G53360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 339.3 bits (869), Expect = 7.1e-93
Identity = 193/638 (30.25%), Postives = 324/638 (50.78%), Query Frame = 0 

Query: 52  DSPFPFPHPLYARLFQICSSNRALLEARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLV 111
           +S F      Y  L   CSS+R+L + RK+  H++         L N  +  YGKCG L 
Sbjct: 60  NSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLR 119

Query: 112 DARELFDEMPHRDGGSWNAMLTAYSQNGYGFEALNLFLVMNRFGVYATKITLASVLGSCG 171
           DARE+FD MP R+  S+ +++T YSQNG G EA+ L+L M +  +   +    S++ +C 
Sbjct: 120 DAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACA 179

Query: 172 AALALHFSRQIHGRIVKSGFVGNVILESSLVDVYGKCRVMKDARRMFDEMQSRNDVSWNV 231
           ++  +   +Q+H +++K     ++I +++L+ +Y +   M DA R+F  +  ++ +SW+ 
Sbjct: 180 SSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSS 239

Query: 232 IVRRYLEVDNGKEAVSMFFQMFREAMM-PLSFTFSNALIACSSMTALIEGRQIHGVVVKV 291
           I+  + ++    EA+S   +M    +  P  + F ++L ACSS+     G QIHG+ +K 
Sbjct: 240 IIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS 299

Query: 292 GFAEDEVISSSLIDMYIKCGRLENAHQVFNQPSSRNLISWTSMVYGYAMSWEVLKARELF 351
             A + +   SL DMY +CG L +A +VF+Q                             
Sbjct: 300 ELAGNAIAGCSLCDMYARCGFLNSARRVFDQ----------------------------- 359

Query: 352 NEMPERNVISWNAMLAGYIHSAQWEEALDFVHLMRSSIKDTDHVTIRLILNVCTGLLDVE 411
             +   +  SWN ++AG  ++   +EA+     MRSS    D +++R +L   T  + + 
Sbjct: 360 --IERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALS 419

Query: 412 RGKQVHGFVYRIGFYSNLFIGNGLLDMYGKCGNLKSARVWFYQMSQWRDGVSWNAILTTY 471
           +G Q+H ++ + GF ++L + N LL MY  C +L      F       D VSWN ILT  
Sbjct: 420 QGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTAC 479

Query: 472 ARHGMSEQAMTIFSEM-QWETAPSKYTFATLLGACANTLALGQGKQIHGFMIRNNYEIDI 531
            +H    + + +F  M   E  P   T   LL  C    +L  G Q+H + ++     + 
Sbjct: 480 LQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQ 539

Query: 532 VVNGALVDMYCKCRELEYALKIFENAASRDVILWNSIILGCCHNRRSSIVIELFQWMTME 591
            +   L+DMY KC  L  A +IF++  +RDV+ W+++I+G   +      + LF+ M   
Sbjct: 540 FIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEM-KS 599

Query: 592 EDIRPDHVTFQGILLACVYENLVELGRQCFDSMSDKFCIIPRLEHYECMIELYGRHGNMD 651
             I P+HVTF G+L AC +  LVE G + + +M  +  I P  EH  C+++L  R G ++
Sbjct: 600 AGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLN 659

Query: 652 ELENFVNNMPFDPTVPMLERILDACRKHGNSRLEERVA 688
           E E F++ M  +P V + + +L AC+  GN  L ++ A
Sbjct: 660 EAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAA 665

[Close]
BLAST of Sed0003350.1 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 329.7 bits (844), Expect = 5.6e-90
Identity = 196/666 (29.43%), Postives = 343/666 (51.50%), Query Frame = 0 

Query: 30  ATTAILKYLKAGRLRKAVSVL-FDSPFPFPHPLYARLFQICSSNRALLEARKVESHLVTF 89
           A T + ++ ++G L  AV +L     +         + Q+C+ +++L + ++V++ +   
Sbjct: 64  ANTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGN 123

Query: 90  CPTPPIFLLNRAIEAYGKCGCLVDARELFDEMPHRDGGSWNAMLTAYSQNGYGFEALNLF 149
                  L ++    Y  CG L +A  +FDE+       WN ++   +++G    ++ LF
Sbjct: 124 GFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLF 183

Query: 150 LVMNRFGVYATKITLASVLGSCGAALALHFSRQIHGRIVKSGFVGNVILESSLVDVYGKC 209
             M   GV     T + V  S  +  ++H   Q+HG I+KSGF     + +SLV  Y K 
Sbjct: 184 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 243

Query: 210 RVMKDARRMFDEMQSRNDVSWNVIVRRYLEVDNGKEAVSMFFQMFREAMMPLSFTFSNAL 269
           + +  AR++FDEM  R+ +SWN I+  Y+     ++ +S+F QM    +     T  +  
Sbjct: 244 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 303

Query: 270 IACSSMTALIEGRQIHGVVVKVGFAEDEVISSSLIDMYIKCGRLENAHQVFNQPSSRNLI 329
             C+    +  GR +H + VK  F+ ++   ++L+DMY KCG L++A  VF + S R+++
Sbjct: 304 AGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVV 363

Query: 330 SWTSMVYGYAMSWEVLKARELFNEMPERNVISWNAMLAGYIHSAQWEEALDFVHLMRSSI 389
           S+TSM+ GYA      +A +LF EM E  +                              
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGI------------------------------ 423

Query: 390 KDTDHVTIRLILNVCTGLLDVERGKQVHGFVYRIGFYSNLFIGNGLLDMYGKCGNLKSAR 449
              D  T+  +LN C     ++ GK+VH ++       ++F+ N L+DMY KCG+++ A 
Sbjct: 424 -SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 483

Query: 450 VWFYQMSQWRDGVSWNAILTTYARHGMSEQAMTIFSEMQWET--APSKYTFATLLGACAN 509
           + F +M + +D +SWN I+  Y+++  + +A+++F+ +  E   +P + T A +L ACA+
Sbjct: 484 LVFSEM-RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 543

Query: 510 TLALGQGKQIHGFMIRNNYEIDIVVNGALVDMYCKCRELEYALKIFENAASRDVILWNSI 569
             A  +G++IHG+++RN Y  D  V  +LVDMY KC  L  A  +F++ AS+D++ W  +
Sbjct: 544 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVM 603

Query: 570 ILGCCHNRRSSIVIELFQWMTMEEDIRPDHVTFQGILLACVYENLVELGRQCFDSMSDKF 629
           I G   +      I LF  M  +  I  D ++F  +L AC +  LV+ G + F+ M  + 
Sbjct: 604 IAGYGMHGFGKEAIALFNQM-RQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 663

Query: 630 CIIPRLEHYECMIELYGRHGNMDELENFVNNMPFDPTVPMLERILDACRKHGNSRLEERV 689
            I P +EHY C++++  R G++ +   F+ NMP  P   +   +L  CR H + +L E+V
Sbjct: 664 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKV 696

Query: 690 AVKLDE 693
           A K+ E
Sbjct: 724 AEKVFE 696

[Close]
BLAST of Sed0003350.1 vs. TAIR 10
Match: AT2G33680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 328.6 bits (841), Expect = 1.3e-89
Identity = 190/627 (30.30%), Postives = 320/627 (51.04%), Query Frame = 0 

Query: 70  SSNRALLEARKVESHLVTFCPTPPIFLLNRAIEAYGKCGCLVDARELFDEMPHRDGGSWN 129
           S  R L+  R V   ++    +  I   N  +  Y KCG L  A  +F+ +  +D  SWN
Sbjct: 25  SQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWN 84

Query: 130 AMLTAYSQNG---YGFEALNLFLVMNRFGVYATKITLASVLGSCGAALALHFSRQIHGRI 189
           +++T YSQNG     +  + LF  M    +     TLA +  +  +  +    RQ H  +
Sbjct: 85  SLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALV 144

Query: 190 VKSGFVGNVILESSLVDVYGKCRVMKDARRMFDEMQSRNDVSWNVIVRRYLEVDNGKEAV 249
           VK    G++ +++SLV +Y K  +++D  ++F  M  RN  +W+ +V  Y      +EA+
Sbjct: 145 VKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAI 204

Query: 250 SMF--FQMFREAMMPLSFTFSNALIACSSMTALIEGRQIHGVVVKVGFAEDEVISSSLID 309
            +F  F   +E      + F+  L + ++   +  GRQIH + +K G      +S++L+ 
Sbjct: 205 KVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVT 264

Query: 310 MYIKCGRLENAHQVFNQPSSRNLISWTSMVYGYAMSWEVLKARELFNEMPERNVISWNAM 369
           MY KC  L  A ++F+    RN I+W++MV GY+ + E L+A +LF+ M           
Sbjct: 265 MYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRM----------- 324

Query: 370 LAGYIHSAQWEEALDFVHLMRSSIKDTDHVTIRLILNVCTGLLDVERGKQVHGFVYRIGF 429
                                + IK +++ TI  +LN C+ +  +E GKQ+H F+ ++GF
Sbjct: 325 -------------------FSAGIKPSEY-TIVGVLNACSDICYLEEGKQLHSFLLKLGF 384

Query: 430 YSNLFIGNGLLDMYGKCGNLKSARVWFYQMSQWRDGVSWNAILTTYARHGMSEQAMTIFS 489
             +LF    L+DMY K G L  AR  F    Q RD   W ++++ Y ++  +E+A+ ++ 
Sbjct: 385 ERHLFATTALVDMYAKAGCLADARKGF-DCLQERDVALWTSLISGYVQNSDNEEALILYR 444

Query: 490 EMQWE-TAPSKYTFATLLGACANTLALGQGKQIHGFMIRNNYEIDIVVNGALVDMYCKCR 549
            M+     P+  T A++L AC++   L  GKQ+HG  I++ + +++ +  AL  MY KC 
Sbjct: 445 RMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCG 504

Query: 550 ELEYALKIFENAASRDVILWNSIILGCCHNRRSSIVIELFQWMTMEEDIRPDHVTFQGIL 609
            LE    +F    ++DV+ WN++I G  HN +    +ELF+ M + E + PD VTF  I+
Sbjct: 505 SLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEM-LAEGMEPDDVTFVNII 564

Query: 610 LACVYENLVELGRQCFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFVNNMPFDPT 669
            AC ++  VE G   F+ MSD+  + P+++HY CM++L  R G + E + F+ +   D  
Sbjct: 565 SACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHG 618

Query: 670 VPMLERILDACRKHGNSRLEERVAVKL 691
           + +   +L AC+ HG   L      KL
Sbjct: 625 LCLWRILLSACKNHGKCELGVYAGEKL 618

The following BLAST results are available for this feature:
BLAST of Sed0003350.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022993859.10.0e+0086.62pentatricopeptide repeat-containing protein At3g26540 [Cucurbita maxima][more]
XP_023550069.10.0e+0086.62pentatricopeptide repeat-containing protein At3g26540 [Cucurbita pepo subsp. pep... [more]
XP_022938461.10.0e+0086.04pentatricopeptide repeat-containing protein At3g26540 [Cucurbita moschata][more]
KAG7016451.10.0e+0085.76Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_038884263.10.0e+0086.15pentatricopeptide repeat-containing protein At3g26540 [Benincasa hispida][more]
BLAST of Sed0003350.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LRV23.8e-22457.88Pentatricopeptide repeat-containing protein At3g26540 OS=Arabidopsis thaliana OX... [more]
Q9SS603.4e-9231.67Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX... [more]
Q9LFI11.0e-9130.25Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidop... [more]
Q9SN397.9e-8929.43Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
P930051.8e-8830.30Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX... [more]
BLAST of Sed0003350.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1K1B70.0e+0086.62pentatricopeptide repeat-containing protein At3g26540 OS=Cucurbita maxima OX=366... [more]
A0A6J1FD790.0e+0086.04pentatricopeptide repeat-containing protein At3g26540 OS=Cucurbita moschata OX=3... [more]
A0A6J1CJX10.0e+0085.61pentatricopeptide repeat-containing protein At3g26540-like OS=Momordica charanti... [more]
A0A5D3DJG90.0e+0081.53Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3B4H50.0e+0081.53pentatricopeptide repeat-containing protein At3g26540 OS=Cucumis melo OX=3656 GN... [more]
BLAST of Sed0003350.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G26540.12.7e-22557.88Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G03580.12.4e-9331.67Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G53360.17.1e-9330.25Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G18750.15.6e-9029.43Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G33680.11.3e-8930.30Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 635..658
e-value: 0.84
score: 10.0
coord: 300..320
e-value: 0.073
score: 13.3
coord: 100..122
e-value: 0.0029
score: 17.8
coord: 534..553
e-value: 0.36
score: 11.2
coord: 432..455
e-value: 0.25
score: 11.7
coord: 127..156
e-value: 1.4E-5
score: 25.0
coord: 328..358
e-value: 1.6E-5
score: 24.8
coord: 359..386
e-value: 0.0019
score: 18.4
coord: 227..254
e-value: 0.12
score: 12.6
coord: 199..225
e-value: 0.0061
score: 16.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 200..224
e-value: 0.0015
score: 16.6
coord: 461..487
e-value: 2.1E-4
score: 19.2
coord: 359..387
e-value: 1.6E-4
score: 19.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 460..506
e-value: 1.9E-9
score: 37.6
coord: 559..606
e-value: 3.0E-7
score: 30.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 295..329
score: 8.506026
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 357..387
score: 9.45966
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 459..493
score: 9.624079
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 225..259
score: 8.834866
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 124..158
score: 9.152743
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 508..625
e-value: 1.2E-18
score: 69.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 29..174
e-value: 7.0E-18
score: 67.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 409..507
e-value: 5.0E-18
score: 67.1
coord: 281..408
e-value: 2.9E-22
score: 80.9
coord: 175..280
e-value: 2.4E-14
score: 55.1
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 473..565
NoneNo IPR availablePANTHERPTHR47928:SF119PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 473..565
NoneNo IPR availablePANTHERPTHR47928:SF119PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 4..473
coord: 560..694
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 4..473
coord: 560..694

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Sed0003350Sed0003350gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0003350.1-five_prime_utrSed0003350.1-five_prime_utr-LG03:2665047..2665101five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0003350.1-exonSed0003350.1-exon-LG03:2665047..2667521exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0003350.1-cdsSed0003350.1-cds-LG03:2665102..2667195CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0003350.1-three_prime_utrSed0003350.1-three_prime_utr-LG03:2667196..2667521three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Sed0003350.1Sed0003350.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009451 RNA modification
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding