Sed0002444.1 (mRNA) Chayote v1

Overview


Name	Sed0002444.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Auxin-responsive protein
Location	LG12: 33948722 .. 33950885 (-)
Sequence length	838
RNA-Seq Expression	Sed0002444.1
Synteny	Sed0002444.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAACATTGAGAGAGACAAAGAAAAAACAAAACTTGTGTGCAGCCATGTCGTCGTCGGAGACAGTTCCTCAGTCGCCGGAATCTGATCTGACCCAAATCTTTTTTGATGAAACTGAGCTCACCTTGGGTCTTCCGGGATCCGAGTTTCGGTCAACCGACCGAAACAAGGTGTATCATAAATCGAATGCCAAACGGGGTTTTTGCGACACCGTCGACGCCGAAGACGGGAGCTCCACGAGTGAACATCGGGACCGTCGCGACAAGGCAGAACTCATCCCCTCCAGTGAAGGTGAGTTTAAATATATATCGTAATCTATCAACTTAAAAGTTTTGAGTATGATAATGATAATTTGACATGGTTTTTTTTTTCTTTTAATTATTAATATTAATTCCCTTGTTGTTGTGTTTACATGTTAACTTTCAAGCCCAAGAGAAGTCTTAATATTAATTAAATTCTATTCTCAAAAAAAAAAATTGATTAAATTCTTTTGGTATATAATTATATTTTAGCAAGCTCTTCAATTACTTCTATTCAAATGAGTAGTATTCTAATGACATCACATATTAAATATTTAATAAGTTGATTATTGCAGTTTTTTTTTCTTCTAAAACTTTCTTTCCTAAAATCAGAGAAAATGAAAAAAGGAAAAAAAACCTTAAGTCCACTACTAAGATTTTACAAAAATGAAACTTTTTTAATGATTTTAAAAGGGTTTGAATCACATATTTTTTAGTGATTTTAAAAGGGTTTGAATCACTTATCTCGAATCCAAAAACAATTCTTTTTTTTTTAGTACAATCCAAAAACAATTCTAAAACATGTTCTTATAAGTATCCAAAATCAATTTGTATGATATAAAAAAATATATTTAAAGTTGCAAAATCAAATGTTTGGAAATAATAATATTTATGGAGTGTGTTTTTTTATGTGAATTAGGGCAAAAGCGGGCAGTAATGGGTTGGCCGCCGGTGAGATCATACAGAAAAAAGACAATAGAAATTATTTACAATTACGTTAAAGTTGGTGCTGATGGGGCCCCATTTTTGCGCAAGCTTGATCTTCAACTGTTCAATGGCTATCACCAATTATTCAAGGCTTTCCATCAATTGTTCACCTCATTACCTATATGTTGTAAGTTTTCAATCGTCCACGAATCGAATCATCAACTTTTAAAATCAAACGTATTTTGTTGGAGACCATCACCTTGTCTCACATCTTTACAAAAATGCATGTCTGTTACTCCTTGCACTGCTAATTGGTTTGAGATCGAATCTCATACTATCTAATATTGTATCATAACAATAGTTGCTATTTGATCCAACTCAAGCGAGTATTCAGTTCACAGATTTGAATCCAACTAGATATAATTCAAATCTTAACGTAAAATTAGTGTTCCTAGAGTGATGTTATCTTGAAGAGACATGTTGGAGATCATCATCCTGCCTTGCACTTTTAGAAGAATTGTGAGCTAGGCTATGTTACTCTCTCGATTAATTTAAGATGAAATCTCATACTATAATACGTTCTTTATTGAAGATGTTGTAAATAACTTTATATATGTTATTTAGGTGATTACTTGGAAGAAGGAAACAATTTGAATCCAATGAAAAGAGGAGATGAATACTTGCCAACTTATGAAGATAAAGATGGAGATTGGATGTTAGTAGGAGATGTTCCTTGGAAGTAAGTTTAATTAATTAAATTGTTTTCCAATCACTTTTACTTTGGTTTGATTATGTTTAATTAATTCCATTTCAAAAAAAAAAATATATGTTTAATTAATTCAAATCCACTCTTCTAATTGAGTTGCAAATTGTGTAGATTGTTTGTTGAATCTTGCAAACGTATTCGTTTGATGAAAGGCTCAGATGTTATTGGCATAGGTAATTTAGAAATATAAAAAATAAGAATTCTATTTTGTTCCATTTTTTTATCATCCAAATAAAAAATATATATTTTTAATTAATTTTGTTTACTTTTATGCAGCTCCAAGAGCCCCATAGAAAGGAGGGAGCTGAAGCTTTTGGATGAGTATCTGTTTCTGTTTTTTTTTTCTTTCTTTAATTTGTTAAAGTTGGGTTCAAAATATGCTCATAGTTATGGCCTGGATGTGATTAGGCCTTTGCAGTTTTGTATAATAAAATGTCAGTTTCAAAAGTAA

mRNA sequence

GAAAAACATTGAGAGAGACAAAGAAAAAACAAAACTTGTGTGCAGCCATGTCGTCGTCGGAGACAGTTCCTCAGTCGCCGGAATCTGATCTGACCCAAATCTTTTTTGATGAAACTGAGCTCACCTTGGGTCTTCCGGGATCCGAGTTTCGGTCAACCGACCGAAACAAGGTGTATCATAAATCGAATGCCAAACGGGGTTTTTGCGACACCGTCGACGCCGAAGACGGGAGCTCCACGAGTGAACATCGGGACCGTCGCGACAAGGCAGAACTCATCCCCTCCAGTGAAGGGCAAAAGCGGGCAGTAATGGGTTGGCCGCCGGTGAGATCATACAGAAAAAAGACAATAGAAATTATTTACAATTACGTTAAAGTTGGTGCTGATGGGGCCCCATTTTTGCGCAAGCTTGATCTTCAACTGTTCAATGGCTATCACCAATTATTCAAGGCTTTCCATCAATTGTTCACCTCATTACCTATATGTTGTGATTACTTGGAAGAAGGAAACAATTTGAATCCAATGAAAAGAGGAGATGAATACTTGCCAACTTATGAAGATAAAGATGGAGATTGGATGTTAGTAGGAGATGTTCCTTGGAAATTGTTTGTTGAATCTTGCAAACGTATTCGTTTGATGAAAGGCTCAGATGTTATTGGCATAGCTCCAAGAGCCCCATAGAAAGGAGGGAGCTGAAGCTTTTGGATGAGTATCTGTTTCTGTTTTTTTTTTCTTTCTTTAATTTGTTAAAGTTGGGTTCAAAATATGCTCATAGTTATGGCCTGGATGTGATTAGGCCTTTGCAGTTTTGTATAATAAAATGTCAGTTTCAAAAGTAA

Coding sequence (CDS)

ATGTCGTCGTCGGAGACAGTTCCTCAGTCGCCGGAATCTGATCTGACCCAAATCTTTTTTGATGAAACTGAGCTCACCTTGGGTCTTCCGGGATCCGAGTTTCGGTCAACCGACCGAAACAAGGTGTATCATAAATCGAATGCCAAACGGGGTTTTTGCGACACCGTCGACGCCGAAGACGGGAGCTCCACGAGTGAACATCGGGACCGTCGCGACAAGGCAGAACTCATCCCCTCCAGTGAAGGGCAAAAGCGGGCAGTAATGGGTTGGCCGCCGGTGAGATCATACAGAAAAAAGACAATAGAAATTATTTACAATTACGTTAAAGTTGGTGCTGATGGGGCCCCATTTTTGCGCAAGCTTGATCTTCAACTGTTCAATGGCTATCACCAATTATTCAAGGCTTTCCATCAATTGTTCACCTCATTACCTATATGTTGTGATTACTTGGAAGAAGGAAACAATTTGAATCCAATGAAAAGAGGAGATGAATACTTGCCAACTTATGAAGATAAAGATGGAGATTGGATGTTAGTAGGAGATGTTCCTTGGAAATTGTTTGTTGAATCTTGCAAACGTATTCGTTTGATGAAAGGCTCAGATGTTATTGGCATAGCTCCAAGAGCCCCATAG

Protein sequence

MSSSETVPQSPESDLTQIFFDETELTLGLPGSEFRSTDRNKVYHKSNAKRGFCDTVDAEDGSSTSEHRDRRDKAELIPSSEGQKRAVMGWPPVRSYRKKTIEIIYNYVKVGADGAPFLRKLDLQLFNGYHQLFKAFHQLFTSLPICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVGDVPWKLFVESCKRIRLMKGSDVIGIAPRAP

Homology

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BLAST of Sed0002444.1 vs. NCBI nr
Match: XP_038880682.1 (auxin-responsive protein IAA1-like [Benincasa hispida])

HSP 1 Score: 341.3 bits (874), Expect = 6.0e-90
Identity = 168/210 (80.00%), Postives = 180/210 (85.71%), Query Frame = 0


Query: 1   MSSSETVPQSPESDLTQIFFDETELTLGLPGSEFRSTDRNKVYHKSNAKRGFCDTVDAED 60
           MSSSETVP+SPESDLTQI FDETELTLGLPG+EFR TD     HK NAKR F DTVDA  
Sbjct: 1   MSSSETVPESPESDLTQINFDETELTLGLPGAEFRPTD-----HKPNAKRCFLDTVDAGV 60

Query: 61  GSSTSEHRDRRDKAELIPSSEGQKRAVMGWPPVRSYRKKTIEIIYNYVKVGADGAPFLRK 120
           GSSTSE RD  D+ +LI S + QKRAVMGWPPVRSYRKKTIE+   YVKV ADGAP+LRK
Sbjct: 61  GSSTSEPRDGHDQPQLISSGDRQKRAVMGWPPVRSYRKKTIEMNSKYVKVAADGAPYLRK 120

Query: 121 LDLQLFNGYHQLFKAFHQLFTSLPICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVG 180
           LDL++F+GY QLF AF QLFTS PICCDYLEEGNNLNP+KR DEYLPTYEDKDGDWMLVG
Sbjct: 121 LDLEMFDGYQQLFIAFEQLFTSFPICCDYLEEGNNLNPVKRADEYLPTYEDKDGDWMLVG 180

Query: 181 DVPWKLFVESCKRIRLMKGSDVIGIAPRAP 211
           DVPWKLF+ESCKRIRLMKGSD IGIAPR P
Sbjct: 181 DVPWKLFIESCKRIRLMKGSDAIGIAPRTP 205

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BLAST of Sed0002444.1 vs. NCBI nr
Match: XP_023516646.1 (auxin-responsive protein IAA11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332.0 bits (850), Expect = 3.7e-87
Identity = 163/210 (77.62%), Postives = 177/210 (84.29%), Query Frame = 0


Query: 1   MSSSETVPQSPESDLTQIFFDETELTLGLPGSEFRSTDRNKVYHKSNAKRGFCDTVDAED 60
           MS+SETVPQSPESD+TQI FDETELTLGLPG            +K NAKRGF DTVDA  
Sbjct: 1   MSTSETVPQSPESDMTQISFDETELTLGLPG------------NKVNAKRGFHDTVDAGV 60

Query: 61  GSSTSEHRDRRDKAELIPSSEGQKRAVMGWPPVRSYRKKTIEIIYNYVKVGADGAPFLRK 120
           GSSTSE RD R++ ELI S++GQKRAVMGWPPVRSYR+KTIE+   YVKV ADGAP+LRK
Sbjct: 61  GSSTSEPRDGRNEPELIASADGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRK 120

Query: 121 LDLQLFNGYHQLFKAFHQLFTSLPICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVG 180
           LDL++FNGY  LF AF +LFTS PICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVG
Sbjct: 121 LDLEMFNGYQDLFIAFEELFTSFPICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVG 180

Query: 181 DVPWKLFVESCKRIRLMKGSDVIGIAPRAP 211
           DVPWKLF+ESCKRIRLMKGSD IG APR P
Sbjct: 181 DVPWKLFIESCKRIRLMKGSDTIGAAPRTP 198

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BLAST of Sed0002444.1 vs. NCBI nr
Match: XP_022961044.1 (auxin-responsive protein IAA11-like [Cucurbita moschata])

HSP 1 Score: 329.7 bits (844), Expect = 1.8e-86
Identity = 162/210 (77.14%), Postives = 175/210 (83.33%), Query Frame = 0


Query: 1   MSSSETVPQSPESDLTQIFFDETELTLGLPGSEFRSTDRNKVYHKSNAKRGFCDTVDAED 60
           MS+SETVPQSPESD+ QI FDETELTLGLPG            +K NAKRGF DTVDA  
Sbjct: 1   MSTSETVPQSPESDMAQISFDETELTLGLPG------------NKVNAKRGFHDTVDAGV 60

Query: 61  GSSTSEHRDRRDKAELIPSSEGQKRAVMGWPPVRSYRKKTIEIIYNYVKVGADGAPFLRK 120
           GSSTSE RD R++ ELI S +GQKRAVMGWPPVRSYR+KTIE+   YVKV ADGAP+LRK
Sbjct: 61  GSSTSEPRDGRNEPELISSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRK 120

Query: 121 LDLQLFNGYHQLFKAFHQLFTSLPICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVG 180
           LDL++FNGY  LF AF +LFTS PICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVG
Sbjct: 121 LDLEMFNGYRDLFIAFEELFTSFPICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVG 180

Query: 181 DVPWKLFVESCKRIRLMKGSDVIGIAPRAP 211
           DVPWKLF+ESCKRIRLMKGSD IG APR P
Sbjct: 181 DVPWKLFIESCKRIRLMKGSDTIGAAPRTP 198

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BLAST of Sed0002444.1 vs. NCBI nr
Match: KAG6589890.1 (Auxin-responsive protein IAA11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 329.3 bits (843), Expect = 2.4e-86
Identity = 161/210 (76.67%), Postives = 176/210 (83.81%), Query Frame = 0


Query: 1   MSSSETVPQSPESDLTQIFFDETELTLGLPGSEFRSTDRNKVYHKSNAKRGFCDTVDAED 60
           MS+SETVPQSPESD+TQI FDETELTLGLPG            +K NAKRGF +TVDA  
Sbjct: 1   MSTSETVPQSPESDMTQISFDETELTLGLPG------------NKVNAKRGFHNTVDAGV 60

Query: 61  GSSTSEHRDRRDKAELIPSSEGQKRAVMGWPPVRSYRKKTIEIIYNYVKVGADGAPFLRK 120
           GSSTSE RD R++ EL+ S +GQKRAVMGWPPVRSYR+KTIE+   YVKV ADGAP+LRK
Sbjct: 61  GSSTSEPRDGRNEPELVSSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRK 120

Query: 121 LDLQLFNGYHQLFKAFHQLFTSLPICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVG 180
           LDL++FNGY  LF AF +LFTS PICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVG
Sbjct: 121 LDLEMFNGYQDLFIAFEELFTSFPICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVG 180

Query: 181 DVPWKLFVESCKRIRLMKGSDVIGIAPRAP 211
           DVPWKLF+ESCKRIRLMKGSD IG APR P
Sbjct: 181 DVPWKLFIESCKRIRLMKGSDTIGAAPRTP 198

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BLAST of Sed0002444.1 vs. NCBI nr
Match: XP_022987877.1 (auxin-responsive protein IAA11-like [Cucurbita maxima])

HSP 1 Score: 326.6 bits (836), Expect = 1.5e-85
Identity = 160/210 (76.19%), Postives = 174/210 (82.86%), Query Frame = 0


Query: 1   MSSSETVPQSPESDLTQIFFDETELTLGLPGSEFRSTDRNKVYHKSNAKRGFCDTVDAED 60
           MS+SETVPQSPESD+TQI FDETELTLGLPG            +K NAKRGF DTVD   
Sbjct: 1   MSTSETVPQSPESDMTQISFDETELTLGLPG------------NKLNAKRGFHDTVDGGV 60

Query: 61  GSSTSEHRDRRDKAELIPSSEGQKRAVMGWPPVRSYRKKTIEIIYNYVKVGADGAPFLRK 120
            SSTSE RD R++ EL+ S +GQKRAVMGWPPVRSYR+KTIE+   YVKV ADGAP+LRK
Sbjct: 61  WSSTSEPRDGRNEPELVSSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRK 120

Query: 121 LDLQLFNGYHQLFKAFHQLFTSLPICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVG 180
           LDL++FNGY  LF AF +LFTS PICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVG
Sbjct: 121 LDLEMFNGYQDLFIAFEELFTSFPICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVG 180

Query: 181 DVPWKLFVESCKRIRLMKGSDVIGIAPRAP 211
           DVPWKLF+ESCKRIRLMKGSD IG APR P
Sbjct: 181 DVPWKLFIESCKRIRLMKGSDTIGAAPRTP 198

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BLAST of Sed0002444.1 vs. ExPASy Swiss-Prot
Match: Q75GK0 (Auxin-responsive protein IAA11 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA11 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 8.6e-39
Identity = 95/229 (41.48%), Postives = 126/229 (55.02%), Query Frame = 0


Query: 20  FDETELTLGLPGSEFRSTDRNKVYHKSNAKRGFCDTVD-------AEDGSSTSEHRDRRD 79
           FDETEL LGLPG+        ++  +S+ KRGF +T+D       A   + + E   + D
Sbjct: 6   FDETELRLGLPGA-------GELAARSSGKRGFAETIDLKLKLQPAAPAAVSGEEGAQED 65

Query: 80  K---------------------------AELIPSS-EGQKRAVMGWPPVRSYRKKTIE-- 139
           K                           AE  P      K  V+GWPPVRS+RK  +   
Sbjct: 66  KEDADAAAAAADEKMSMKRSASQSSVVTAEPDPDKPRAPKAQVVGWPPVRSFRKNVLAEK 125

Query: 140 -IIYNYVKVGADGAPFLRKLDLQLFNGYHQLFKAFHQLFTSLPI-CCDYLEEGNNLNPMK 199
                 VKV  DGAP+LRK+D+ ++  Y +L  AF  +FTS  I  C   ++    N ++
Sbjct: 126 CKAAALVKVSMDGAPYLRKIDVAMYKSYPELSMAFQNMFTSFTIGKCGSHQQLKESNKLR 185

Query: 200 RGDEYLPTYEDKDGDWMLVGDVPWKLFVESCKRIRLMKGSDVIGIAPRA 210
              EY+PTYEDKDGDWMLVGDVPW++FVESCKR+R+MKGS+ IG+APRA
Sbjct: 186 DDLEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRA 227

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BLAST of Sed0002444.1 vs. ExPASy Swiss-Prot
Match: O24407 (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 8.6e-39
Identity = 96/236 (40.68%), Postives = 128/236 (54.24%), Query Frame = 0


Query: 18  IFFDETELTLGLPGSEFRSTDRNKVYHKSNAKRGFCDTVD--------AEDGSSTSEHRD 77
           I F+ TEL LGLPG         ++  K+N KRGF +TVD        A D  S  +  +
Sbjct: 2   INFEATELRLGLPG----GNHGGEMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLEN 61

Query: 78  RRDKAELIPSSEGQKRAVMGWPPVRSYRKKTIE--------------------------- 137
            ++K    P+    K  V+GWPPVRS+RK  +                            
Sbjct: 62  MKEKVVKPPA----KAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSAS 121

Query: 138 --IIYNYVKVGADGAPFLRKLDLQLFNGYHQLFKAFHQLFTSLPI-------CCDYLEEG 197
                 YVKV  DGAP+LRK+DL+L+  Y  L  A  ++F+S  I         D++ E 
Sbjct: 122 ACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNE- 181

Query: 198 NNLNPMKRGDEYLPTYEDKDGDWMLVGDVPWKLFVESCKRIRLMKGSDVIGIAPRA 210
           + L  +  G +Y+PTYEDKDGDWMLVGDVPW++FV+SCKRIR+MKGS+ IG+APRA
Sbjct: 182 SKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRA 228

[Close]

BLAST of Sed0002444.1 vs. ExPASy Swiss-Prot
Match: Q5VRD1 (Auxin-responsive protein IAA1 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA1 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.3e-38
Identity = 90/208 (43.27%), Postives = 119/208 (57.21%), Query Frame = 0


Query: 3   SSETVPQSPESDLTQ-IFFDETELTLGLPGSEFRSTDRNKVYHKSNAKRGFCDTVDAEDG 62
           S ET   S ES     + F++T LTL LPGS   +   +    +S+      D  DA D 
Sbjct: 2   SVETERSSTESSAASGLDFEDTALTLRLPGSLAAAAAPDPDRKRSSPSSS--DAADAADN 61

Query: 63  SSTSEHRDRRDKAELIPSSEGQKRAVMGWPPVRSYRKKTIEIIYNYVKVGADGAPFLRKL 122
           SS          A    +    K  V+GWPPVRS+RK  +     +VKV  DGAP+LRK+
Sbjct: 62  SS--------PLAAAADAPPAPKARVVGWPPVRSFRKNALAA--KFVKVAVDGAPYLRKV 121

Query: 123 DLQLFNGYHQLFKAFHQLFTSLPICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVGD 182
           DL+ ++GY QL +A    F S      + ++   L     G EY+PTYEDKDGDWMLVGD
Sbjct: 122 DLEAYSGYDQLLRALQDKFFSHFTIRKFADDERKLVDAVNGTEYVPTYEDKDGDWMLVGD 181

Query: 183 VPWKLFVESCKRIRLMKGSDVIGIAPRA 210
           VPWK+FVE+C+R+RLMK S+ + +APRA
Sbjct: 182 VPWKMFVETCQRLRLMKSSEAVNLAPRA 197

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BLAST of Sed0002444.1 vs. ExPASy Swiss-Prot
Match: P93830 (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana OX=3702 GN=IAA17 PE=1 SV=2)

HSP 1 Score: 157.5 bits (397), Expect = 1.6e-37
Identity = 94/218 (43.12%), Postives = 127/218 (58.26%), Query Frame = 0


Query: 22  ETELTLGLPGSEFRSTDRNKVYHKSNAKRGFCDTVDA----------EDGSSTSE--HRD 81
           ETEL LGLPG +        V   +  KRGF +TVD           ++GS+T +    D
Sbjct: 11  ETELCLGLPGGD-------TVAPVTGNKRGFSETVDLKLNLNNEPANKEGSTTHDVVTFD 70

Query: 82  RRDKAEL--IPSSEGQKRAVMGWPPVRSYRKKTIEIIYN---------YVKVGADGAPFL 141
            ++K+     P+    K  V+GWPPVRSYRK  +              +VKV  DGAP+L
Sbjct: 71  SKEKSACPKDPAKPPAKAQVVGWPPVRSYRKNVMVSCQKSSGGPEAAAFVKVSMDGAPYL 130

Query: 142 RKLDLQLFNGYHQLFKAFHQLFTSLPICCDYLEEG--NNLNPMKRGD-----EYLPTYED 201
           RK+DL+++  Y +L  A   +F+S  +     EEG  + +N  K  D     +Y+P+YED
Sbjct: 131 RKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSWDYVPSYED 190

Query: 202 KDGDWMLVGDVPWKLFVESCKRIRLMKGSDVIGIAPRA 210
           KDGDWMLVGDVPW +FV++CKR+RLMKGSD IG+APRA
Sbjct: 191 KDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPRA 221

[Close]

BLAST of Sed0002444.1 vs. ExPASy Swiss-Prot
Match: P0C132 (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.6e-37
Identity = 96/263 (36.50%), Postives = 131/263 (49.81%), Query Frame = 0


Query: 20  FDETELTLGLPGSEFRSTDRNKVYHKSNAKRGFCDT-------------VDAEDGSSTSE 79
           F+ TEL LGLPG              S+ KRGF +T             VD +D    + 
Sbjct: 7   FEATELRLGLPGGGGDGDAAAAAARSSSGKRGFAETIDLKLKLEPAAAAVDDDDDKEEAA 66

Query: 80  HRDRRDKAELI------------PSSEGQKRA----------------------VMGWPP 139
             DR  K +++             ++ G KR+                      V+GWPP
Sbjct: 67  ADDREKKVDIVGADNDDASPPAAAAAGGMKRSPSQSSVVTAAADPEKPRAPKAQVVGWPP 126

Query: 140 VRSYRKKTIEIIYN---------------------YVKVGADGAPFLRKLDLQLFNGYHQ 199
           VRSYRK  + +  +                     +VKV  DGAP+LRK+DL+++  Y +
Sbjct: 127 VRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKVDLKMYKSYLE 186

Query: 200 LFKAFHQLFTSLPI--CCDYLEEGNN---LNPMKRGDEYLPTYEDKDGDWMLVGDVPWKL 210
           L KA  ++F+S  I  C  +   G N   +  +  G EY+PTYEDKDGDWMLVGDVPW++
Sbjct: 187 LSKALEKMFSSFTIGNCGSHGVNGMNESKIADLLNGSEYVPTYEDKDGDWMLVGDVPWEM 246

[Close]

BLAST of Sed0002444.1 vs. ExPASy TrEMBL
Match: A0A6J1HCV0 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111461669 PE=3 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 8.8e-87
Identity = 162/210 (77.14%), Postives = 175/210 (83.33%), Query Frame = 0


Query: 1   MSSSETVPQSPESDLTQIFFDETELTLGLPGSEFRSTDRNKVYHKSNAKRGFCDTVDAED 60
           MS+SETVPQSPESD+ QI FDETELTLGLPG            +K NAKRGF DTVDA  
Sbjct: 1   MSTSETVPQSPESDMAQISFDETELTLGLPG------------NKVNAKRGFHDTVDAGV 60

Query: 61  GSSTSEHRDRRDKAELIPSSEGQKRAVMGWPPVRSYRKKTIEIIYNYVKVGADGAPFLRK 120
           GSSTSE RD R++ ELI S +GQKRAVMGWPPVRSYR+KTIE+   YVKV ADGAP+LRK
Sbjct: 61  GSSTSEPRDGRNEPELISSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRK 120

Query: 121 LDLQLFNGYHQLFKAFHQLFTSLPICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVG 180
           LDL++FNGY  LF AF +LFTS PICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVG
Sbjct: 121 LDLEMFNGYRDLFIAFEELFTSFPICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVG 180

Query: 181 DVPWKLFVESCKRIRLMKGSDVIGIAPRAP 211
           DVPWKLF+ESCKRIRLMKGSD IG APR P
Sbjct: 181 DVPWKLFIESCKRIRLMKGSDTIGAAPRTP 198

[Close]

BLAST of Sed0002444.1 vs. ExPASy TrEMBL
Match: A0A6J1JBK2 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111485284 PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 7.4e-86
Identity = 160/210 (76.19%), Postives = 174/210 (82.86%), Query Frame = 0


Query: 1   MSSSETVPQSPESDLTQIFFDETELTLGLPGSEFRSTDRNKVYHKSNAKRGFCDTVDAED 60
           MS+SETVPQSPESD+TQI FDETELTLGLPG            +K NAKRGF DTVD   
Sbjct: 1   MSTSETVPQSPESDMTQISFDETELTLGLPG------------NKLNAKRGFHDTVDGGV 60

Query: 61  GSSTSEHRDRRDKAELIPSSEGQKRAVMGWPPVRSYRKKTIEIIYNYVKVGADGAPFLRK 120
            SSTSE RD R++ EL+ S +GQKRAVMGWPPVRSYR+KTIE+   YVKV ADGAP+LRK
Sbjct: 61  WSSTSEPRDGRNEPELVSSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRK 120

Query: 121 LDLQLFNGYHQLFKAFHQLFTSLPICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVG 180
           LDL++FNGY  LF AF +LFTS PICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVG
Sbjct: 121 LDLEMFNGYQDLFIAFEELFTSFPICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVG 180

Query: 181 DVPWKLFVESCKRIRLMKGSDVIGIAPRAP 211
           DVPWKLF+ESCKRIRLMKGSD IG APR P
Sbjct: 181 DVPWKLFIESCKRIRLMKGSDTIGAAPRTP 198

[Close]

BLAST of Sed0002444.1 vs. ExPASy TrEMBL
Match: A0A6J1CUS1 (Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111014532 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 9.1e-84
Identity = 155/209 (74.16%), Postives = 173/209 (82.78%), Query Frame = 0


Query: 4   SETVPQSPESDLTQIFFDETELTLGLPGSEFRSTDRNKVYHKSN-AKRGFCDTVDAEDGS 63
           SET PQSPESDLT + FDETELTLGLPG+EFR  + NKVYH+ N AKRGF DT+D+  GS
Sbjct: 3   SETAPQSPESDLTHVNFDETELTLGLPGAEFRPAEGNKVYHRPNAAKRGFHDTIDSSVGS 62

Query: 64  STSEHRDRRDKAELIPSSEGQKRAVMGWPPVRSYRKKTIEI-IYNYVKVGADGAPFLRKL 123
           S SE     DKA+LI S++GQKRAVMGWPPVRSYRKKTIE+    YVKV ADGAP+LRK+
Sbjct: 63  SISEQCGSCDKAKLISSADGQKRAVMGWPPVRSYRKKTIEMNNCKYVKVAADGAPYLRKI 122

Query: 124 DLQLFNGYHQLFKAFHQLFTSLPICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVGD 183
           DL++FN Y +LF  F +LF S PICCDYLEEGN LNPMKR DEYLPTYEDKDGDWMLVGD
Sbjct: 123 DLEMFNSYKELFNTFRKLFISFPICCDYLEEGNILNPMKRADEYLPTYEDKDGDWMLVGD 182

Query: 184 VPWKLFVESCKRIRLMKGSDVIGIAPRAP 211
           VPWKLF+ESC RIRLMKGS+  GIAPR P
Sbjct: 183 VPWKLFIESCNRIRLMKGSEANGIAPRTP 211

[Close]

BLAST of Sed0002444.1 vs. ExPASy TrEMBL
Match: A0A5D3BM61 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00180 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.6e-83
Identity = 165/217 (76.04%), Postives = 176/217 (81.11%), Query Frame = 0


Query: 1   MSSSETVPQSPESDLTQIFFDETELTLGLPGSEFRSTDRNKVYHKSNAKRGFCDTVDAED 60
           MSSSETVP SPESDLTQI FDETELTLGLPG+EFR T     +HKSNAKR F DTVDA  
Sbjct: 1   MSSSETVPDSPESDLTQINFDETELTLGLPGAEFRPT----THHKSNAKRCFHDTVDAGG 60

Query: 61  -GSSTSEHRD--RRDKAELIPSSEGQKRAVMGWPPVRSYRKKTIEI----IYNYVKVGAD 120
            GSSTS+ RD    D+ +   S  G+KRAVMGWPPVRSYRKKTIE+       YVKVGAD
Sbjct: 61  VGSSTSKPRDISLDDEPQHGSSGNGEKRAVMGWPPVRSYRKKTIEMNSTSATKYVKVGAD 120

Query: 121 GAPFLRKLDLQLFNGYHQLFKAFHQLFTSLPICCDYLEEGNNLNPMKRGDEYLPTYEDKD 180
           GAP+LRKLDLQ+FNGY QLF AFH LFTS PI CDYLEEGNNLNP+KR DEYLPTYEDKD
Sbjct: 121 GAPYLRKLDLQIFNGYQQLFDAFHHLFTSFPISCDYLEEGNNLNPVKRADEYLPTYEDKD 180

Query: 181 GDWMLVGDVPWKLFVESCKRIRLMKGSDVIGIAPRAP 211
           GDWMLVGDVPWKLF+ESCKRIRLMKGSD IG A R P
Sbjct: 181 GDWMLVGDVPWKLFIESCKRIRLMKGSDAIGTASRTP 213

[Close]

BLAST of Sed0002444.1 vs. ExPASy TrEMBL
Match: A0A5A7TIX8 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold588G00060 PE=3 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 7.7e-83
Identity = 164/217 (75.58%), Postives = 175/217 (80.65%), Query Frame = 0


Query: 1   MSSSETVPQSPESDLTQIFFDETELTLGLPGSEFRSTDRNKVYHKSNAKRGFCDTVDAE- 60
           MSSSETVP SPESD TQI FDETELTLGLPG+EFR T     +HKSNAKR F DTVDA  
Sbjct: 1   MSSSETVPDSPESDFTQINFDETELTLGLPGAEFRPT----THHKSNAKRCFHDTVDAGC 60

Query: 61  DGSSTSEHRD--RRDKAELIPSSEGQKRAVMGWPPVRSYRKKTIEI----IYNYVKVGAD 120
            GSSTS+ RD    D+ +   S  G+KRAVMGWPPVRSYRKKTIE+       YVKVGAD
Sbjct: 61  VGSSTSKPRDISLDDEPQHGSSGNGEKRAVMGWPPVRSYRKKTIEMNSTSATKYVKVGAD 120

Query: 121 GAPFLRKLDLQLFNGYHQLFKAFHQLFTSLPICCDYLEEGNNLNPMKRGDEYLPTYEDKD 180
           GAP+LRKLDLQ+FNGY QLF AFH LFTS PI CDYLEEGNNLNP+KR DEYLPTYEDKD
Sbjct: 121 GAPYLRKLDLQIFNGYQQLFDAFHHLFTSFPISCDYLEEGNNLNPVKRADEYLPTYEDKD 180

Query: 181 GDWMLVGDVPWKLFVESCKRIRLMKGSDVIGIAPRAP 211
           GDWMLVGDVPWKLF+ESCKRIRLMKGSD IG A R P
Sbjct: 181 GDWMLVGDVPWKLFIESCKRIRLMKGSDAIGTASRTP 213

[Close]

BLAST of Sed0002444.1 vs. TAIR 10
Match: AT3G04730.1 (indoleacetic acid-induced protein 16 )

HSP 1 Score: 161.8 bits (408), Expect = 6.1e-40
Identity = 96/236 (40.68%), Postives = 128/236 (54.24%), Query Frame = 0


Query: 18  IFFDETELTLGLPGSEFRSTDRNKVYHKSNAKRGFCDTVD--------AEDGSSTSEHRD 77
           I F+ TEL LGLPG         ++  K+N KRGF +TVD        A D  S  +  +
Sbjct: 2   INFEATELRLGLPG----GNHGGEMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLEN 61

Query: 78  RRDKAELIPSSEGQKRAVMGWPPVRSYRKKTIE--------------------------- 137
            ++K    P+    K  V+GWPPVRS+RK  +                            
Sbjct: 62  MKEKVVKPPA----KAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSAS 121

Query: 138 --IIYNYVKVGADGAPFLRKLDLQLFNGYHQLFKAFHQLFTSLPI-------CCDYLEEG 197
                 YVKV  DGAP+LRK+DL+L+  Y  L  A  ++F+S  I         D++ E 
Sbjct: 122 ACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNE- 181

Query: 198 NNLNPMKRGDEYLPTYEDKDGDWMLVGDVPWKLFVESCKRIRLMKGSDVIGIAPRA 210
           + L  +  G +Y+PTYEDKDGDWMLVGDVPW++FV+SCKRIR+MKGS+ IG+APRA
Sbjct: 182 SKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRA 228

[Close]

BLAST of Sed0002444.1 vs. TAIR 10
Match: AT1G04250.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-38
Identity = 94/218 (43.12%), Postives = 127/218 (58.26%), Query Frame = 0


Query: 22  ETELTLGLPGSEFRSTDRNKVYHKSNAKRGFCDTVDA----------EDGSSTSE--HRD 81
           ETEL LGLPG +        V   +  KRGF +TVD           ++GS+T +    D
Sbjct: 11  ETELCLGLPGGD-------TVAPVTGNKRGFSETVDLKLNLNNEPANKEGSTTHDVVTFD 70

Query: 82  RRDKAEL--IPSSEGQKRAVMGWPPVRSYRKKTIEIIYN---------YVKVGADGAPFL 141
            ++K+     P+    K  V+GWPPVRSYRK  +              +VKV  DGAP+L
Sbjct: 71  SKEKSACPKDPAKPPAKAQVVGWPPVRSYRKNVMVSCQKSSGGPEAAAFVKVSMDGAPYL 130

Query: 142 RKLDLQLFNGYHQLFKAFHQLFTSLPICCDYLEEG--NNLNPMKRGD-----EYLPTYED 201
           RK+DL+++  Y +L  A   +F+S  +     EEG  + +N  K  D     +Y+P+YED
Sbjct: 131 RKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSWDYVPSYED 190

Query: 202 KDGDWMLVGDVPWKLFVESCKRIRLMKGSDVIGIAPRA 210
           KDGDWMLVGDVPW +FV++CKR+RLMKGSD IG+APRA
Sbjct: 191 KDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPRA 221

[Close]

BLAST of Sed0002444.1 vs. TAIR 10
Match: AT4G14550.1 (indole-3-acetic acid inducible 14 )

HSP 1 Score: 152.1 bits (383), Expect = 4.8e-37
Identity = 92/219 (42.01%), Postives = 125/219 (57.08%), Query Frame = 0


Query: 22  ETELTLGLPGSEFRSTDRNKVYHKSNAKRGFCDTVDAEDG--SSTSEHRD------RRDK 81
           ETEL LGLPG     T  +        KRGF +TVD +    S+   H D       ++K
Sbjct: 5   ETELCLGLPGG--TETVESPAKSGVGNKRGFSETVDLKLNLQSNKQGHVDLNTNGAPKEK 64

Query: 82  AEL-IPSSEGQKRAVMGWPPVRSYRKKTI---------EIIYN------YVKVGADGAPF 141
             L  PS    K  V+GWPPVR+YRK  +         E + +      +VKV  DGAP+
Sbjct: 65  TFLKDPSKPPAKAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVAFVKVSMDGAPY 124

Query: 142 LRKLDLQLFNGYHQLFKAFHQLFTSLPI-------CCDYLEEGNNLNPMKRGDEYLPTYE 201
           LRK+DL+++  Y  L  A  ++F+S  +         D++ E   ++ +    EY+P+YE
Sbjct: 125 LRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMD-LLNSSEYVPSYE 184

Query: 202 DKDGDWMLVGDVPWKLFVESCKRIRLMKGSDVIGIAPRA 210
           DKDGDWMLVGDVPW +FVESCKR+R+MKGS+ IG+APRA
Sbjct: 185 DKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRA 220

[Close]

BLAST of Sed0002444.1 vs. TAIR 10
Match: AT3G23050.1 (indole-3-acetic acid 7 )

HSP 1 Score: 149.1 bits (375), Expect = 4.1e-36
Identity = 89/227 (39.21%), Postives = 123/227 (54.19%), Query Frame = 0


Query: 23  TELTLGLPGSEFRSTDRNKVYHKSNAKRGFCDTVDA-------EDGSSTSEHRDRRDKAE 82
           TEL LGLPG        +       +KRGF +TVD        ++GS   ++     K +
Sbjct: 11  TELCLGLPGG--AEAVESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVDLKNVSAVPKEK 70

Query: 83  LI---PSSEGQKRAVMGWPPVRSYRKKTI--------------EIIYNY---------VK 142
                PS    K  V+GWPPVR+YRK  +              E   N+         VK
Sbjct: 71  TTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGAGLVK 130

Query: 143 VGADGAPFLRKLDLQLFNGYHQLFKAFHQLFTSLPI-------CCDYLEEGNNLNPMKRG 202
           V  DGAP+LRK+DL+++  Y  L  A  ++F+S  +         D++ E   +N +   
Sbjct: 131 VSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKLMN-LLNS 190

Query: 203 DEYLPTYEDKDGDWMLVGDVPWKLFVESCKRIRLMKGSDVIGIAPRA 210
            EY+P+YEDKDGDWMLVGDVPW++FVESCKR+R+MKGS+ +G+APRA
Sbjct: 191 SEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRA 234

[Close]

BLAST of Sed0002444.1 vs. TAIR 10
Match: AT5G65670.2 (indole-3-acetic acid inducible 9 )

HSP 1 Score: 147.9 bits (372), Expect = 9.1e-36
Identity = 101/283 (35.69%), Postives = 138/283 (48.76%), Query Frame = 0


Query: 4   SETVPQSPESDLTQIFFDETELTLGLPGSE--FRSTDRNKV------------------- 63
           S T+    E D   I    TELTLGLPGS+   R T+ N +                   
Sbjct: 47  SSTLSPLAEDDKATISLKATELTLGLPGSQSPARDTELNLLSPAKLDEKPFFPLLPSKDE 106

Query: 64  ----YHKSNA---KRGFCDTVD--AEDGSSTSEHRD-------------RRDKAELIPSS 123
                 K+NA   KRGF DT+D  AE  SS    ++             ++D  + IP  
Sbjct: 107 ICSSSQKNNASGNKRGFSDTMDQFAEAKSSVYTEKNWMFPEAAATQSVTKKDVPQNIPKG 166

Query: 124 EGQ-----------KRAVMGWPPVRSYRKKTIEIIYN--------------YVKVGADGA 183
           +             K  ++GWPPVRSYRK T+                   +VKV  DGA
Sbjct: 167 QSSTTNNSSSPPAAKAQIVGWPPVRSYRKNTLATTCKNSDEVDGRPGSGALFVKVSMDGA 226

Query: 184 PFLRKLDLQLFNGYHQLFKAFHQLFTSLPI--C-------CDYLEEGNNLNPMKRGDEYL 210
           P+LRK+DL+ +  Y +L  A  ++FT+  +  C        D L E   L  +  G +Y+
Sbjct: 227 PYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSE-TKLKDLLNGKDYV 286

The following BLAST results are available for this feature:

BLAST of Sed0002444.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880682.1	6.0e-90	80.00	auxin-responsive protein IAA1-like [Benincasa hispida]	[more]
XP_023516646.1	3.7e-87	77.62	auxin-responsive protein IAA11-like [Cucurbita pepo subsp. pepo]	[more]
XP_022961044.1	1.8e-86	77.14	auxin-responsive protein IAA11-like [Cucurbita moschata]	[more]
KAG6589890.1	2.4e-86	76.67	Auxin-responsive protein IAA11, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022987877.1	1.5e-85	76.19	auxin-responsive protein IAA11-like [Cucurbita maxima]	[more]

BLAST of Sed0002444.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q75GK0	8.6e-39	41.48	Auxin-responsive protein IAA11 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA11...	[more]
O24407	8.6e-39	40.68	Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=...	[more]
Q5VRD1	3.3e-38	43.27	Auxin-responsive protein IAA1 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA1 P...	[more]
P93830	1.6e-37	43.12	Auxin-responsive protein IAA17 OS=Arabidopsis thaliana OX=3702 GN=IAA17 PE=1 SV=...	[more]
P0C132	1.6e-37	36.50	Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30...	[more]

BLAST of Sed0002444.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HCV0	8.8e-87	77.14	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111461669 PE=3 SV=1	[more]
A0A6J1JBK2	7.4e-86	76.19	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111485284 PE=3 SV=1	[more]
A0A6J1CUS1	9.1e-84	74.16	Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111014532 PE=3 SV=...	[more]
A0A5D3BM61	1.6e-83	76.04	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7TIX8	7.7e-83	75.58	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of Sed0002444.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04730.1	6.1e-40	40.68	indoleacetic acid-induced protein 16	[more]
AT1G04250.1	1.2e-38	43.12	AUX/IAA transcriptional regulator family protein	[more]
AT4G14550.1	4.8e-37	42.01	indole-3-acetic acid inducible 14	[more]
AT3G23050.1	4.1e-36	39.21	indole-3-acetic acid 7	[more]
AT5G65670.2	9.1e-36	35.69	indole-3-acetic acid inducible 9	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 102..208 e-value: 1.4E-32 score: 113.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..79
None	No IPR available	PANTHER	PTHR31734:SF34	AUXIN-RESPONSIVE PROTEIN IAA15	coord: 7..203
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 106..198
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 42..101 e-value: 8.3E-9 score: 35.7 coord: 106..208 e-value: 1.4E-39 score: 136.4
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 7..203
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 105..199 score: 16.187519

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0002444	Sed0002444	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0002444.1-exon	Sed0002444.1-exon-LG12:33948722..33948896	exon
Sed0002444.1-exon	Sed0002444.1-exon-LG12:33949000..33949061	exon
Sed0002444.1-exon	Sed0002444.1-exon-LG12:33949200..33949314	exon
Sed0002444.1-exon	Sed0002444.1-exon-LG12:33949752..33949946	exon
Sed0002444.1-exon	Sed0002444.1-exon-LG12:33950595..33950885	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0002444.1-three_prime_utr	Sed0002444.1-three_prime_utr-LG12:33948722..33948879	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0002444.1-cds	Sed0002444.1-cds-LG12:33948880..33948896	CDS
Sed0002444.1-cds	Sed0002444.1-cds-LG12:33949000..33949061	CDS
Sed0002444.1-cds	Sed0002444.1-cds-LG12:33949200..33949314	CDS
Sed0002444.1-cds	Sed0002444.1-cds-LG12:33949752..33949946	CDS
Sed0002444.1-cds	Sed0002444.1-cds-LG12:33950595..33950838	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0002444.1-five_prime_utr	Sed0002444.1-five_prime_utr-LG12:33950839..33950885	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0002444.1	Sed0002444.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009734	auxin-activated signaling pathway
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding