Sed0001764.1 (mRNA) Chayote v1

Overview


Name	Sed0001764.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	RAB GTPase homolog A1F
Location	LG01: 3979230 .. 3980872 (-)
Sequence length	828
RNA-Seq Expression	Sed0001764.1
Synteny	Sed0001764.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTCCGACAGCCTCCTCTCGACTGTCGGGATCTCTGAGTGTGTATTTAGAATAATTCAGATCCCAGAATTGTAAAAGAAAATGGGTGCGTACAGAGCCGATGACGATTACGATTATTTGTTCAAGGTGGTGCTGATCGGCGACTCGGGCGTTGGAAAGTCGAATCTGTTGTCACGTTTCACTAGAAATGATTTCAGCCTGGAAACCAAATCAACCATCGGCGTTGAGTTTGCAACCCGTAGTATTCGGGTTGATGATAAAATCGTCAAGGCTCAGATTTGGGACACTGCCGGCCAAGAAAGGTCCATTTTTCTCTCTTCTTCTGTTTTTTTATTTAATTTTGTTTATCAAATTTTGTCTCTCTTTTGAATTTTGTTCTAAATCATGTCTTATTATGTTATTCATTAGCAAATAATAGTTTGTAAACAATGATAACGTCTTATCTAAGATTCAAATGAGAGATCTTTGAAGATATACATAATTCATAGCTACTATTTATATCAACAAGACAAGAGGTTTCACCGAATGGGCGGTGGCGCGATTTGTTATCCTGGTTTGATGTTAATTCATTTTCACTCCACGGTCACGGGTTCCATCTCTGGAATCGGTATTTGTATTCCCCTCCTCCCTACTTATACTAAAAAAAAACAAGACAAGGGGTTTCTTTTTCTCAAGTTTTAATTTGGAAGGTATTACTACTTTCAAATAAAATGAGAACCGCCATAAGGATTTTGCATAATCAAACCTATAATCGTGGAATTGAATTGGATTATAATCAATTAACCAAGCCACAATTCCACCAACCCTTTCGGTAGACGCACATTCTTGTTTAGTTGTTCAATCGTAAGTATATCAAAATTAAATGTGTTTGACTTAGAGCAATCCTACAACAGAATAATTTTCTGAGGATTGTATTAGGAAGTAGGTAAATGAAGACAAAAACATGTTGAAATGACATGCACAATGTGTTAAAAGCAAAAGCAAGTATGTAGCATTGTTAGGCCAAGGGAATGAGTCGTTAAGTACTCGATTTGCATTCTAAATTCTCATGTTAAAGAGAGTCCCCAAATGGCGATATTATTTTAGTCTCTCAAATAATTTGTTTTTCATGACATAGGTACAGAGCAATCACGAGTGCGTACTACAGAGGAGCGGTAGGTGCATTGATAGTGTATGACGTGACACGACACGTGACATTCGAGAACGTGGAGAGATGGCTGAAGGAGCTAAGAGGGCACACAGATCACAACATAGTGATAATGCTGGTAGGGAACAAGGCAGATTTGCGGCACTTGAGGGCAGTGTCAACCGAGGACGCACAAGCGTTCGCAGAGAAGGAGAGAATCTATTTCATGGAAACATCAGCACTAGAGTCGTTTAATGTCGAGAACTCATTCACCGAAGTTCTCACGCAAACATACCGAGTCGTCAACAAGAAAATGCTCGACATTGGTGACGACCCTACCGTCCTCCCCAAGGGACAGACCATTGACATTGGCTCCAAAGATGATGTTTCTGCCATGAAGAAGGGTGGCTGCTGTTCTTCATAACAAACTCAGCATGTTTCAAATTGAAACATTCAAATGGGGTATGTTTGTTAAGGATGTGAGTTTGGTGGTTTTTTCTGTTGTGATCTGATTTGTG

mRNA sequence

ACTCCGACAGCCTCCTCTCGACTGTCGGGATCTCTGAGTGTGTATTTAGAATAATTCAGATCCCAGAATTGTAAAAGAAAATGGGTGCGTACAGAGCCGATGACGATTACGATTATTTGTTCAAGGTGGTGCTGATCGGCGACTCGGGCGTTGGAAAGTCGAATCTGTTGTCACGTTTCACTAGAAATGATTTCAGCCTGGAAACCAAATCAACCATCGGCGTTGAGTTTGCAACCCGTAGTATTCGGGTTGATGATAAAATCGTCAAGGCTCAGATTTGGGACACTGCCGGCCAAGAAAGGTACAGAGCAATCACGAGTGCGTACTACAGAGGAGCGGTAGGTGCATTGATAGTGTATGACGTGACACGACACGTGACATTCGAGAACGTGGAGAGATGGCTGAAGGAGCTAAGAGGGCACACAGATCACAACATAGTGATAATGCTGGTAGGGAACAAGGCAGATTTGCGGCACTTGAGGGCAGTGTCAACCGAGGACGCACAAGCGTTCGCAGAGAAGGAGAGAATCTATTTCATGGAAACATCAGCACTAGAGTCGTTTAATGTCGAGAACTCATTCACCGAAGTTCTCACGCAAACATACCGAGTCGTCAACAAGAAAATGCTCGACATTGGTGACGACCCTACCGTCCTCCCCAAGGGACAGACCATTGACATTGGCTCCAAAGATGATGTTTCTGCCATGAAGAAGGGTGGCTGCTGTTCTTCATAACAAACTCAGCATGTTTCAAATTGAAACATTCAAATGGGGTATGTTTGTTAAGGATGTGAGTTTGGTGGTTTTTTCTGTTGTGATCTGATTTGTG

Coding sequence (CDS)

ATGGGTGCGTACAGAGCCGATGACGATTACGATTATTTGTTCAAGGTGGTGCTGATCGGCGACTCGGGCGTTGGAAAGTCGAATCTGTTGTCACGTTTCACTAGAAATGATTTCAGCCTGGAAACCAAATCAACCATCGGCGTTGAGTTTGCAACCCGTAGTATTCGGGTTGATGATAAAATCGTCAAGGCTCAGATTTGGGACACTGCCGGCCAAGAAAGGTACAGAGCAATCACGAGTGCGTACTACAGAGGAGCGGTAGGTGCATTGATAGTGTATGACGTGACACGACACGTGACATTCGAGAACGTGGAGAGATGGCTGAAGGAGCTAAGAGGGCACACAGATCACAACATAGTGATAATGCTGGTAGGGAACAAGGCAGATTTGCGGCACTTGAGGGCAGTGTCAACCGAGGACGCACAAGCGTTCGCAGAGAAGGAGAGAATCTATTTCATGGAAACATCAGCACTAGAGTCGTTTAATGTCGAGAACTCATTCACCGAAGTTCTCACGCAAACATACCGAGTCGTCAACAAGAAAATGCTCGACATTGGTGACGACCCTACCGTCCTCCCCAAGGGACAGACCATTGACATTGGCTCCAAAGATGATGTTTCTGCCATGAAGAAGGGTGGCTGCTGTTCTTCATAA

Protein sequence

MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNDFSLETKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIVIMLVGNKADLRHLRAVSTEDAQAFAEKERIYFMETSALESFNVENSFTEVLTQTYRVVNKKMLDIGDDPTVLPKGQTIDIGSKDDVSAMKKGGCCSS

Homology

[Close]

BLAST of Sed0001764.1 vs. NCBI nr
Match: XP_022944131.1 (ras-related protein RABA1f-like [Cucurbita moschata] >XP_022947170.1 ras-related protein RABA1f-like [Cucurbita moschata] >XP_022971100.1 ras-related protein RABA1f-like [Cucurbita maxima] >XP_023512680.1 ras-related protein RABA1f-like [Cucurbita pepo subsp. pepo] >XP_023533793.1 ras-related protein RABA1f-like [Cucurbita pepo subsp. pepo] >XP_038900910.1 ras-related protein RABA1f-like [Benincasa hispida] >KAG6570909.1 Ras-related protein RABA1f, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010754.1 Ras-related protein RABA1f, partial [Cucurbita argyrosperma subsp. argyrosperma] >KAG6604881.1 Ras-related protein RABA1f, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026962.1 Ras-related protein RABA1f, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 417.9 bits (1073), Expect = 5.2e-113
Identity = 209/217 (96.31%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNDFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRN+FSLETKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKERIYFMETSALESFNVENSFTEVLTQTYRVVNK 180
           IMLVGNKADLRHLRAVSTEDAQAFAE+ER YFMETSALESFNVENSFTEVLTQTYRVV++
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180

Query: 181 KMLDIGDDPTVLPKGQTIDIGSKDDVSAMKKGGCCSS 218
           K+LDIGDDPTVLPKGQTIDIGSKDDVSA+KK GCCSS
Sbjct: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 217

[Close]

BLAST of Sed0001764.1 vs. NCBI nr
Match: XP_031736627.1 (ras-related protein RABA1f [Cucumis sativus] >KGN63213.1 hypothetical protein Csa_022290 [Cucumis sativus])

HSP 1 Score: 415.6 bits (1067), Expect = 2.6e-112
Identity = 208/217 (95.85%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNDFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRN+FSLETKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELR HTDHNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRSHTDHNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKERIYFMETSALESFNVENSFTEVLTQTYRVVNK 180
           IMLVGNKADLRHLRAVSTEDAQAFAE+ER YFMETSALESFNVENSFTEVLTQTYRVV++
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180

Query: 181 KMLDIGDDPTVLPKGQTIDIGSKDDVSAMKKGGCCSS 218
           K+LDIGDDPTVLPKGQTIDIGSKDDVSA+KK GCCSS
Sbjct: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 217

[Close]

BLAST of Sed0001764.1 vs. NCBI nr
Match: XP_022986376.1 (ras-related protein RABA1f-like [Cucurbita maxima])

HSP 1 Score: 415.6 bits (1067), Expect = 2.6e-112
Identity = 208/217 (95.85%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNDFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRN+FSLETKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKERIYFMETSALESFNVENSFTEVLTQTYRVVNK 180
           IMLVGNKADLRHLRAVS EDAQAFAE+ER YFMETSALESFNVENSFTEVLTQTYRVV++
Sbjct: 121 IMLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180

Query: 181 KMLDIGDDPTVLPKGQTIDIGSKDDVSAMKKGGCCSS 218
           K+LDIGDDPTVLPKGQTIDIGSKDDVSA+KK GCCSS
Sbjct: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 217

[Close]

BLAST of Sed0001764.1 vs. NCBI nr
Match: XP_008455938.1 (PREDICTED: ras-related protein RABA1f [Cucumis melo] >KAA0067439.1 ras-related protein RABA1f [Cucumis melo var. makuwa] >TYK09544.1 ras-related protein RABA1f [Cucumis melo var. makuwa])

HSP 1 Score: 412.9 bits (1060), Expect = 1.7e-111
Identity = 207/217 (95.39%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNDFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRN+FSLETKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELR HTDHNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRSHTDHNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKERIYFMETSALESFNVENSFTEVLTQTYRVVNK 180
           IMLVGNKADLRHLRAVSTEDAQAFAE+ER YFMETSALESFNVENSFTEVLTQTYRVV++
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180

Query: 181 KMLDIGDDPTVLPKGQTIDIGSKDDVSAMKKGGCCSS 218
           K+LDIGDDPTV PKGQTIDIGSKDDVSA+KK GCCSS
Sbjct: 181 KILDIGDDPTVPPKGQTIDIGSKDDVSAVKKAGCCSS 217

[Close]

BLAST of Sed0001764.1 vs. NCBI nr
Match: XP_022140351.1 (ras-related protein RABA1f-like [Momordica charantia])

HSP 1 Score: 411.4 bits (1056), Expect = 4.9e-111
Identity = 206/217 (94.93%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNDFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRN+FSLETKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTD NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDQNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKERIYFMETSALESFNVENSFTEVLTQTYRVVNK 180
           IMLVGNKADLRHLRAVSTEDAQAFAE+ER YFMETSALESFNVENSFTEVLTQTYRVV++
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180

Query: 181 KMLDIGDDPTVLPKGQTIDIGSKDDVSAMKKGGCCSS 218
           K+LDIG+DPTVLPKG TIDIGSKDDVSA+KK GCCSS
Sbjct: 181 KILDIGEDPTVLPKGHTIDIGSKDDVSAVKKAGCCSS 217

[Close]

BLAST of Sed0001764.1 vs. ExPASy Swiss-Prot
Match: Q9FJH0 (Ras-related protein RABA1f OS=Arabidopsis thaliana OX=3702 GN=RABA1F PE=2 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 1.2e-104
Identity = 189/217 (87.10%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNDFSLETKSTIGVEFATRSIRVDDK 60
           M AYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTRN+FSLE+KSTIGVEFATRSI VDDK
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKERIYFMETSALESFNVENSFTEVLTQTYRVVNK 180
           IM VGNKADLRHLRAVSTEDA+AFAE+E  +FMETSALES NVEN+FTEVL+Q YRVV++
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KMLDIGDDPTVLPKGQTIDIGSKDDVSAMKKGGCCSS 218
           K LDIGDDP  LPKGQTI++GSKDDVSA+KK GCCS+
Sbjct: 181 KALDIGDDPAALPKGQTINVGSKDDVSAVKKVGCCSN 217

[Close]

BLAST of Sed0001764.1 vs. ExPASy Swiss-Prot
Match: Q9LK99 (Ras-related protein RABA1g OS=Arabidopsis thaliana OX=3702 GN=RABA1G PE=2 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 3.3e-102
Identity = 185/217 (85.25%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNDFSLETKSTIGVEFATRSIRVDDK 60
           M AYRADDDYD+L+KVVLIGDSGVGKSNLLSRFTRN+FSLE+KSTIGVEFATRSI VD+K
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HT+ NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKERIYFMETSALESFNVENSFTEVLTQTYRVVNK 180
           IMLVGNKADLRHLRAVSTEDA+AFAE+E  +FMETSALE+ NVEN+FTEVL+Q YRV +K
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180

Query: 181 KMLDIGDDPTVLPKGQTIDIGSKDDVSAMKKGGCCSS 218
           K LDIGDD T LPKGQ+I++GSKDDVS +KK GCCSS
Sbjct: 181 KALDIGDDHTTLPKGQSINVGSKDDVSEVKKVGCCSS 217

[Close]

BLAST of Sed0001764.1 vs. ExPASy Swiss-Prot
Match: Q40521 (Ras-related protein Rab11B OS=Nicotiana tabacum OX=4097 GN=RAB11B PE=2 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.3e-101
Identity = 183/216 (84.72%), Postives = 203/216 (93.98%), Query Frame = 0


Query: 2   GAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNDFSLETKSTIGVEFATRSIRVDDKI 61
           G YRA+DDYDYLFK+VLIGDSGVGKSNLLSRF+RN+F+LE+KSTIGVEFATRSIRVDDKI
Sbjct: 3   GGYRAEDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKI 62

Query: 62  VKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIVI 121
           VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+TRHVTFENVERWLKELR HTD NIVI
Sbjct: 63  VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVI 122

Query: 122 MLVGNKADLRHLRAVSTEDAQAFAEKERIYFMETSALESFNVENSFTEVLTQTYRVVNKK 181
           MLVGNKADLRHLRAVSTEDA+AFAE+E  +FMETSALES NVEN+FTEVLT+ Y+VV +K
Sbjct: 123 MLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRK 182

Query: 182 MLDIGDDPTVLPKGQTIDIGSKDDVSAMKKGGCCSS 218
            L++GDDP  LPKGQTI++G KDDVSA+KK GCCSS
Sbjct: 183 ALEVGDDPAALPKGQTINVG-KDDVSAVKKVGCCSS 217

[Close]

BLAST of Sed0001764.1 vs. ExPASy Swiss-Prot
Match: Q9S810 (Ras-related protein RABA1i OS=Arabidopsis thaliana OX=3702 GN=RABA1I PE=2 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 2.0e-99
Identity = 179/218 (82.11%), Postives = 202/218 (92.66%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNDFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRA+DDYDYLFKVVL GDSGVGKSNLLSRFTRNDFS ++++TIGVEFATRSI+ DDK
Sbjct: 1   MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKERIYFMETSALESFNVENSFTEVLTQTYRVVNK 180
           IMLVGNKADLRHLRA+STE+A+AFAE+E  +FMETSALE+ NV+N+FTEVLTQ YRVV+K
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180

Query: 181 KMLDIGDDP-TVLPKGQTIDIGSKDDVSAMKKGGCCSS 218
           K L+ GDDP T LPKGQ I++G +DD+SA+KK GCCS+
Sbjct: 181 KALEAGDDPTTALPKGQMINVGGRDDISAVKKPGCCSA 218

[Close]

BLAST of Sed0001764.1 vs. ExPASy Swiss-Prot
Match: Q1PEX3 (Ras-related protein RABA1h OS=Arabidopsis thaliana OX=3702 GN=RABA1H PE=2 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 1.3e-98
Identity = 178/218 (81.65%), Postives = 199/218 (91.28%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNDFSLETKSTIGVEFATRSIRVDDK 60
           MG Y+A+DDYDYLFKVVL GDSGVGKSNLLSRFTRNDFS +++STIGVEFATRSI+VDDK
Sbjct: 1   MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD N V
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKERIYFMETSALESFNVENSFTEVLTQTYRVVNK 180
           IMLVGNKADL HLRA+STE+ + FAE+E  +FMETSALE+ NVEN+FTEVLTQ YRVV+K
Sbjct: 121 IMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSK 180

Query: 181 KMLDIGDDP-TVLPKGQTIDIGSKDDVSAMKKGGCCSS 218
           K LD GDDP T LPKGQ I++GS+DDVSA+KK GCC++
Sbjct: 181 KALDAGDDPTTALPKGQMINVGSRDDVSAVKKSGCCAT 218

[Close]

BLAST of Sed0001764.1 vs. ExPASy TrEMBL
Match: A0A6J1G637 (ras-related protein RABA1f-like OS=Cucurbita moschata OX=3662 GN=LOC111451118 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 2.5e-113
Identity = 209/217 (96.31%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNDFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRN+FSLETKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKERIYFMETSALESFNVENSFTEVLTQTYRVVNK 180
           IMLVGNKADLRHLRAVSTEDAQAFAE+ER YFMETSALESFNVENSFTEVLTQTYRVV++
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180

Query: 181 KMLDIGDDPTVLPKGQTIDIGSKDDVSAMKKGGCCSS 218
           K+LDIGDDPTVLPKGQTIDIGSKDDVSA+KK GCCSS
Sbjct: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 217

[Close]

BLAST of Sed0001764.1 vs. ExPASy TrEMBL
Match: A0A6J1I4T0 (ras-related protein RABA1f-like OS=Cucurbita maxima OX=3661 GN=LOC111469871 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 2.5e-113
Identity = 209/217 (96.31%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNDFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRN+FSLETKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKERIYFMETSALESFNVENSFTEVLTQTYRVVNK 180
           IMLVGNKADLRHLRAVSTEDAQAFAE+ER YFMETSALESFNVENSFTEVLTQTYRVV++
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180

Query: 181 KMLDIGDDPTVLPKGQTIDIGSKDDVSAMKKGGCCSS 218
           K+LDIGDDPTVLPKGQTIDIGSKDDVSA+KK GCCSS
Sbjct: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 217

[Close]

BLAST of Sed0001764.1 vs. ExPASy TrEMBL
Match: A0A6J1JAX5 (ras-related protein RABA1f-like OS=Cucurbita maxima OX=3661 GN=LOC111484133 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.3e-112
Identity = 208/217 (95.85%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNDFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRN+FSLETKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKERIYFMETSALESFNVENSFTEVLTQTYRVVNK 180
           IMLVGNKADLRHLRAVS EDAQAFAE+ER YFMETSALESFNVENSFTEVLTQTYRVV++
Sbjct: 121 IMLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180

Query: 181 KMLDIGDDPTVLPKGQTIDIGSKDDVSAMKKGGCCSS 218
           K+LDIGDDPTVLPKGQTIDIGSKDDVSA+KK GCCSS
Sbjct: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 217

[Close]

BLAST of Sed0001764.1 vs. ExPASy TrEMBL
Match: A0A0A0LN26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G415550 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.3e-112
Identity = 208/217 (95.85%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNDFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRN+FSLETKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELR HTDHNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRSHTDHNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKERIYFMETSALESFNVENSFTEVLTQTYRVVNK 180
           IMLVGNKADLRHLRAVSTEDAQAFAE+ER YFMETSALESFNVENSFTEVLTQTYRVV++
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180

Query: 181 KMLDIGDDPTVLPKGQTIDIGSKDDVSAMKKGGCCSS 218
           K+LDIGDDPTVLPKGQTIDIGSKDDVSA+KK GCCSS
Sbjct: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 217

[Close]

BLAST of Sed0001764.1 vs. ExPASy TrEMBL
Match: A0A5D3CEB7 (Ras-related protein RABA1f OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757G00260 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 8.2e-112
Identity = 207/217 (95.39%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNDFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRN+FSLETKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELR HTDHNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRSHTDHNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKERIYFMETSALESFNVENSFTEVLTQTYRVVNK 180
           IMLVGNKADLRHLRAVSTEDAQAFAE+ER YFMETSALESFNVENSFTEVLTQTYRVV++
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180

Query: 181 KMLDIGDDPTVLPKGQTIDIGSKDDVSAMKKGGCCSS 218
           K+LDIGDDPTV PKGQTIDIGSKDDVSA+KK GCCSS
Sbjct: 181 KILDIGDDPTVPPKGQTIDIGSKDDVSAVKKAGCCSS 217

[Close]

BLAST of Sed0001764.1 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 380.6 bits (976), Expect = 8.6e-106
Identity = 189/217 (87.10%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNDFSLETKSTIGVEFATRSIRVDDK 60
           M AYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTRN+FSLE+KSTIGVEFATRSI VDDK
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKERIYFMETSALESFNVENSFTEVLTQTYRVVNK 180
           IM VGNKADLRHLRAVSTEDA+AFAE+E  +FMETSALES NVEN+FTEVL+Q YRVV++
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KMLDIGDDPTVLPKGQTIDIGSKDDVSAMKKGGCCSS 218
           K LDIGDDP  LPKGQTI++GSKDDVSA+KK GCCS+
Sbjct: 181 KALDIGDDPAALPKGQTINVGSKDDVSAVKKVGCCSN 217

[Close]

BLAST of Sed0001764.1 vs. TAIR 10
Match: AT3G15060.1 (RAB GTPase homolog A1G )

HSP 1 Score: 372.5 bits (955), Expect = 2.4e-103
Identity = 185/217 (85.25%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNDFSLETKSTIGVEFATRSIRVDDK 60
           M AYRADDDYD+L+KVVLIGDSGVGKSNLLSRFTRN+FSLE+KSTIGVEFATRSI VD+K
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HT+ NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKERIYFMETSALESFNVENSFTEVLTQTYRVVNK 180
           IMLVGNKADLRHLRAVSTEDA+AFAE+E  +FMETSALE+ NVEN+FTEVL+Q YRV +K
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180

Query: 181 KMLDIGDDPTVLPKGQTIDIGSKDDVSAMKKGGCCSS 218
           K LDIGDD T LPKGQ+I++GSKDDVS +KK GCCSS
Sbjct: 181 KALDIGDDHTTLPKGQSINVGSKDDVSEVKKVGCCSS 217

[Close]

BLAST of Sed0001764.1 vs. TAIR 10
Match: AT1G28550.1 (RAB GTPase homolog A1I )

HSP 1 Score: 363.2 bits (931), Expect = 1.4e-100
Identity = 179/218 (82.11%), Postives = 202/218 (92.66%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNDFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRA+DDYDYLFKVVL GDSGVGKSNLLSRFTRNDFS ++++TIGVEFATRSI+ DDK
Sbjct: 1   MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKERIYFMETSALESFNVENSFTEVLTQTYRVVNK 180
           IMLVGNKADLRHLRA+STE+A+AFAE+E  +FMETSALE+ NV+N+FTEVLTQ YRVV+K
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180

Query: 181 KMLDIGDDP-TVLPKGQTIDIGSKDDVSAMKKGGCCSS 218
           K L+ GDDP T LPKGQ I++G +DD+SA+KK GCCS+
Sbjct: 181 KALEAGDDPTTALPKGQMINVGGRDDISAVKKPGCCSA 218

[Close]

BLAST of Sed0001764.1 vs. TAIR 10
Match: AT2G33870.1 (RAB GTPase homolog A1H )

HSP 1 Score: 360.5 bits (924), Expect = 9.3e-100
Identity = 178/218 (81.65%), Postives = 199/218 (91.28%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNDFSLETKSTIGVEFATRSIRVDDK 60
           MG Y+A+DDYDYLFKVVL GDSGVGKSNLLSRFTRNDFS +++STIGVEFATRSI+VDDK
Sbjct: 1   MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD N V
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKERIYFMETSALESFNVENSFTEVLTQTYRVVNK 180
           IMLVGNKADL HLRA+STE+ + FAE+E  +FMETSALE+ NVEN+FTEVLTQ YRVV+K
Sbjct: 121 IMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSK 180

Query: 181 KMLDIGDDP-TVLPKGQTIDIGSKDDVSAMKKGGCCSS 218
           K LD GDDP T LPKGQ I++GS+DDVSA+KK GCC++
Sbjct: 181 KALDAGDDPTTALPKGQMINVGSRDDVSAVKKSGCCAT 218

[Close]

BLAST of Sed0001764.1 vs. TAIR 10
Match: AT4G18430.1 (RAB GTPase homolog A1E )

HSP 1 Score: 357.1 bits (915), Expect = 1.0e-98
Identity = 171/216 (79.17%), Postives = 199/216 (92.13%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNDFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFK+VLIGDSGVGKSNLLSRFTRN+FS+E+KSTIGVEFATRS+ VD+K
Sbjct: 1   MGAYRADDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           I+KAQ+WDTAGQERYRAITSAYYRGAVGAL+VYD+TRH+TFENVERWLKELR HTD N+V
Sbjct: 61  IIKAQLWDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKERIYFMETSALESFNVENSFTEVLTQTYRVVNK 180
           IMLVGNKADLRHLRAV TE+A++F+E+E ++FMETSAL++ NVE +FT VLTQ YRV+++
Sbjct: 121 IMLVGNKADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSR 180

Query: 181 KMLDIGDDPTVLPKGQTIDIGSKDDVSAMKKGGCCS 217
           K LD   DP  LPKGQTIDIG+KDDV+A+K  GCCS
Sbjct: 181 KALDGTGDPMSLPKGQTIDIGNKDDVTAVKSSGCCS 216

The following BLAST results are available for this feature:

BLAST of Sed0001764.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944131.1	5.2e-113	96.31	ras-related protein RABA1f-like [Cucurbita moschata] >XP_022947170.1 ras-related...	[more]
XP_031736627.1	2.6e-112	95.85	ras-related protein RABA1f [Cucumis sativus] >KGN63213.1 hypothetical protein Cs...	[more]
XP_022986376.1	2.6e-112	95.85	ras-related protein RABA1f-like [Cucurbita maxima]	[more]
XP_008455938.1	1.7e-111	95.39	PREDICTED: ras-related protein RABA1f [Cucumis melo] >KAA0067439.1 ras-related p...	[more]
XP_022140351.1	4.9e-111	94.93	ras-related protein RABA1f-like [Momordica charantia]	[more]

BLAST of Sed0001764.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJH0	1.2e-104	87.10	Ras-related protein RABA1f OS=Arabidopsis thaliana OX=3702 GN=RABA1F PE=2 SV=1	[more]
Q9LK99	3.3e-102	85.25	Ras-related protein RABA1g OS=Arabidopsis thaliana OX=3702 GN=RABA1G PE=2 SV=1	[more]
Q40521	1.3e-101	84.72	Ras-related protein Rab11B OS=Nicotiana tabacum OX=4097 GN=RAB11B PE=2 SV=1	[more]
Q9S810	2.0e-99	82.11	Ras-related protein RABA1i OS=Arabidopsis thaliana OX=3702 GN=RABA1I PE=2 SV=1	[more]
Q1PEX3	1.3e-98	81.65	Ras-related protein RABA1h OS=Arabidopsis thaliana OX=3702 GN=RABA1H PE=2 SV=1	[more]

BLAST of Sed0001764.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G637	2.5e-113	96.31	ras-related protein RABA1f-like OS=Cucurbita moschata OX=3662 GN=LOC111451118 PE...	[more]
A0A6J1I4T0	2.5e-113	96.31	ras-related protein RABA1f-like OS=Cucurbita maxima OX=3661 GN=LOC111469871 PE=4...	[more]
A0A6J1JAX5	1.3e-112	95.85	ras-related protein RABA1f-like OS=Cucurbita maxima OX=3661 GN=LOC111484133 PE=4...	[more]
A0A0A0LN26	1.3e-112	95.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G415550 PE=4 SV=1	[more]
A0A5D3CEB7	8.2e-112	95.39	Ras-related protein RABA1f OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]

BLAST of Sed0001764.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60860.1	8.6e-106	87.10	RAB GTPase homolog A1F	[more]
AT3G15060.1	2.4e-103	85.25	RAB GTPase homolog A1G	[more]
AT1G28550.1	1.4e-100	82.11	RAB GTPase homolog A1I	[more]
AT2G33870.1	9.3e-100	81.65	RAB GTPase homolog A1H	[more]
AT4G18430.1	1.0e-98	79.17	RAB GTPase homolog A1E	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 14..35 score: 55.2 coord: 37..53 score: 35.03 coord: 55..77 score: 53.32 coord: 117..130 score: 54.55 coord: 152..174 score: 36.34
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..216 e-value: 4.8E-9 score: 46.1
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 4.8E-108 score: 374.9
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 3.1E-25 score: 99.8
None	No IPR available	PANTHER	PTHR47979:SF21	RAS-RELATED PROTEIN RABA1F-LIKE	coord: 1..215
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..215
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..215 score: 35.484829
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..178 score: 9.599043
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..175 e-value: 6.93784E-127 score: 353.018
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..173 e-value: 1.0E-12 score: 42.7
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..174 e-value: 1.6E-61 score: 206.7
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 8..217 score: 16.280527
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..215 e-value: 3.2E-70 score: 237.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..181
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 3.8E-38 score: 128.8

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0001764	Sed0001764	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0001764.1-exon	Sed0001764.1-exon-LG01:3979230..3979756	exon
Sed0001764.1-exon	Sed0001764.1-exon-LG01:3980572..3980872	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0001764.1-three_prime_utr	Sed0001764.1-three_prime_utr-LG01:3979230..3979323	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0001764.1-cds	Sed0001764.1-cds-LG01:3979324..3979756	CDS
Sed0001764.1-cds	Sed0001764.1-cds-LG01:3980572..3980792	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0001764.1-five_prime_utr	Sed0001764.1-five_prime_utr-LG01:3980793..3980872	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0001764.1	Sed0001764.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005768	endosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding