Sed0000618.1 (mRNA) Chayote v1

Overview


Name	Sed0000618.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	15-cis-phytoene desaturase, chloroplastic/chromoplastic
Location	LG12: 7322860 .. 7325791 (+)
Sequence length	2932
RNA-Seq Expression	Sed0000618.1
Synteny	Sed0000618.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCCCCAAACCACAGGTTGGAAGGTGGCCACCTAAAGAAAAGAAACCAGAGAAAAAAAACCCACATCAACTGAGAATTTGCTCGAACCAACGTCTTCATAAGCATGGAATAAAGGAATCCCATTAAAGAAGACCAGCTAACCTTCATCAATCCAATAATGGTTGAATTTCGAAGAACTTTGGGGGATAACCCGGGGAACATATAGTCTACTGAGGTACAAGACCCCACCAAAGTTAAAGAGGGGAGAGCCAGTTCCATAAAGGATCGATCTTTGCCTCGAAACGAACACACGAGCTGTTGTCTAAGAAGGCCTTTATCGACTAGTTCTCCTAAAGAACGCACCAACACAAAACACCTACCTTTAAGACTAATAAACAAACACAACAAAAACAATAATGAAAAGCAACTAAAAAAGTGCAAGACTACAATCTCAACCCATATGACCAACAGAGAGCCCAAGAGAAACAGCCACATAAGCAGAAGCAAAGTCCAAAACATTATAAAAAAAACTTGTCATTTAATCTGAATATGGAGATGCATCGAACCAGAAGAATGAATTAAGAACTGGACCATGGATCCAATGGGTTTGGTTGAACCATCCATTTGGTCTAAAGACCGAGCCGGTTCAAGAGAACCATACATTGGTTCACTCACAACCCAAAGACCAGATGGACTTACTCTGACCTCACCAGCTATCTTTGTGTGAAGACCACGTGCAACCTTCTCGAGCCCATCAAACGCCAGCTGCGCCATCTCCATCTCTGACCACTAACGCAACTTTTTACTGTTTCCATCGTGGCCCTTCTGACTTCTGCGACGACCATCTTCTCCGACGGGATTTCTCCATAAGATTTTTCCATCTCCGGCGAGCTCTACTTTCTCCGTCACCATCTTATTCTTATGCTTTTTGCTCCAATCACCCTTTCCCCTATCAAATGGCGTTTTTCCCCCTTCTAACCCCTTCTCTTTTCTTTGTTTCTCTCCTTCATCTTCTCTTAGCTTTTCTTCACCCATTCCAACGGCCACTCTCGCTCTCCTCTTTCTCACCTCACCAGAGCCGAAACTCTGCACCCACCTTTTGACCCCGCCAACAGAGACTCTAATCTTCTCCCACACACAAATTTCCACACTGGCTCCATACCTCTTGCTCTTCATCGAGCCCAAAGAACGCCTTCTCTCGGAGAGAAGGACCTAGAAACGCACAAAGATGTGCCCACAAACGCTCGTTGGACGATCTCCGGGGAGATCTTCCCTAAGCCCATTGAGAGTGCATCTCTCTCTAGAAGTTAGAGAGAGAGAGCCTCATTTAATATTCTCTTCACCATCTCATTTAATGGCAATTTCAAATTAAATTGTTTTTTTTTCTAAAATTATATTTAAATAAAGAGAGCCAAATCTATCCACATGAGACACGTGGCAATTGTAGAAACCCAACCAAATCCCAAACGGATAACCAACCAACGATGACCACCGTCGCCACCAACAAACACCAACCAAATCGGAAAACTCAACCATGAGTCTCACCGCCGGCACATTCCTCCCCTACCACCGCCACTCCAAAACCCCTTTCCCAAACACTCCCAAATTCAAACCTCGAGCCTCATCCCCATTCCCCCCTTCACAAACCACCACCACCACCACCGGAGTCGTCGTCATCGGCGCCGGCCTCGCCGGACTCGCCGCCGCCACCCACCTCAAGGCCCGAAACATCCCATTCCTCCTCCTCGAAGCCTCCGACGCCGTAGGCGGCCGCGTCCGCACCGACGCCGTCGACGGCTTCCTCCTCGACCGCGGCTTCCAAATCTTCATCACCGCTTACCCAGAAGCCCAATCCCTTCTCAATTACAAATCCCTCAACTTAAACAAATTCTACTCCGGCGCCAAAATCTATTACGACCGCCAATTCCACACCGTCGCCGACCCATTACGCCATTTTTCCGATTCCCTTTCCTCTCTCTCAAACCCAATCGGCTCTGTTTTCGACAAATTTCTAATCGGTTTAACCAGAGCCAGAGTCATTGGCCGCTCCGATGAAGAAATTCTCACCGAAAATGAAGCCTCCACCATGGATTTCTTGACCGGAATCGGCTTCTCCGATTCGATTATCACCCGTTTCTTCCGACCCTTTTTCGGTGGGATTTTCTTTGACACGGATCTAGAAACTTCGTCTCGATTGTTCAATTTCGTTTTCAAATGTCTCGCTCTGGGTGAAAATACTCTCCCGGCGAACGGAATCGGCGCAATTCCTCTCCAACTAGCCGCGAATCTCCCGCCGGAGACCATTCTGCTTAACTCCAGAGTGGTCGATTTGGATTCCGATTCGAAATCGAAATCGTGGGTTGTGAAATTACAGAATGGGGGGATTATAAGGAGCGAAATGGGGGTGATCGTAGCGGTGGAGGAGCCGGCGGCGGAGAGGCTGTTAGCCGGGAGAAGAAAGTTCGGGGTTCGCCGGAAACCGCCGCGGAGCACGACGTGTTTGTATTTCGCGGCGGATCGGGGGAGGATTCCGGTGACGGAACCGGTGTTGTTTTTGAATGGGTCAGGGAAGGGGATTGTGAATAATATGTTCTTTGCGACGAACGTGGCGCCGTCGTACGGGCCGCCGGAGAAGGTGCTGGTTTCGGTGTCGTTGATCGGAAAGTTTGAGGATATCGGCGATGAGGATCTGACGGCTCAGGTTGTTCGGGAGATGGGGGATTGGTTTGGGGAATCGACGGTTGTGGGGTGGAAGCATTTACGGACGTACAGGATTGGGTTTGCACAGCCGGATCAATCTCCACCGTCGGATTCGATGAAGGATCCGACGGTGGAGAGGGGGCTTTACGTGTGTGGGGATTATTTGACTTCTGCGACTTTTGATGGCGCTTTGGTCTCCGGCCGGAAGGCCGTTGAAGCCTTGGTGAGAGATAGAGCCGTCGCTTTGGTATAA

mRNA sequence

GGCCCCAAACCACAGGTTGGAAGGTGGCCACCTAAAGAAAAGAAACCAGAGAAAAAAAACCCACATCAACTGAGAATTTGCTCGAACCAACGTCTTCATAAGCATGGAATAAAGGAATCCCATTAAAGAAGACCAGCTAACCTTCATCAATCCAATAATGGTTGAATTTCGAAGAACTTTGGGGGATAACCCGGGGAACATATAGTCTACTGAGGTACAAGACCCCACCAAAGTTAAAGAGGGGAGAGCCAGTTCCATAAAGGATCGATCTTTGCCTCGAAACGAACACACGAGCTGTTGTCTAAGAAGGCCTTTATCGACTAGTTCTCCTAAAGAACGCACCAACACAAAACACCTACCTTTAAGACTAATAAACAAACACAACAAAAACAATAATGAAAAGCAACTAAAAAAGTGCAAGACTACAATCTCAACCCATATGACCAACAGAGAGCCCAAGAGAAACAGCCACATAAGCAGAAGCAAAGTCCAAAACATTATAAAAAAAACTTGTCATTTAATCTGAATATGGAGATGCATCGAACCAGAAGAATGAATTAAGAACTGGACCATGGATCCAATGGGTTTGGTTGAACCATCCATTTGGTCTAAAGACCGAGCCGGTTCAAGAGAACCATACATTGGTTCACTCACAACCCAAAGACCAGATGGACTTACTCTGACCTCACCAGCTATCTTTGTGTGAAGACCACGTGCAACCTTCTCGAGCCCATCAAACGCCAGCTGCGCCATCTCCATCTCTGACCACTAACGCAACTTTTTACTGTTTCCATCGTGGCCCTTCTGACTTCTGCGACGACCATCTTCTCCGACGGGATTTCTCCATAAGATTTTTCCATCTCCGGCGAGCTCTACTTTCTCCGTCACCATCTTATTCTTATGCTTTTTGCTCCAATCACCCTTTCCCCTATCAAATGGCGTTTTTCCCCCTTCTAACCCCTTCTCTTTTCTTTGTTTCTCTCCTTCATCTTCTCTTAGCTTTTCTTCACCCATTCCAACGGCCACTCTCGCTCTCCTCTTTCTCACCTCACCAGAGCCGAAACTCTGCACCCACCTTTTGACCCCGCCAACAGAGACTCTAATCTTCTCCCACACACAAATTTCCACACTGGCTCCATACCTCTTGCTCTTCATCGAGCCCAAAGAACGCCTTCTCTCGGAGAGAAGGACCTAGAAACGCACAAAGATGTGCCCACAAACGCTCGTTGGACGATCTCCGGGGAGATCTTCCCTAAGCCCATTGAGAGTGCATCTCTCTCTAGAAGTTAGAGAGAGAGAGCCTCATTTAATATTCTCTTCACCATCTCATTTAATGGCAATTTCAAATTAAATTGTTTTTTTTTCTAAAATTATATTTAAATAAAGAGAGCCAAATCTATCCACATGAGACACGTGGCAATTGTAGAAACCCAACCAAATCCCAAACGGATAACCAACCAACGATGACCACCGTCGCCACCAACAAACACCAACCAAATCGGAAAACTCAACCATGAGTCTCACCGCCGGCACATTCCTCCCCTACCACCGCCACTCCAAAACCCCTTTCCCAAACACTCCCAAATTCAAACCTCGAGCCTCATCCCCATTCCCCCCTTCACAAACCACCACCACCACCACCGGAGTCGTCGTCATCGGCGCCGGCCTCGCCGGACTCGCCGCCGCCACCCACCTCAAGGCCCGAAACATCCCATTCCTCCTCCTCGAAGCCTCCGACGCCGTAGGCGGCCGCGTCCGCACCGACGCCGTCGACGGCTTCCTCCTCGACCGCGGCTTCCAAATCTTCATCACCGCTTACCCAGAAGCCCAATCCCTTCTCAATTACAAATCCCTCAACTTAAACAAATTCTACTCCGGCGCCAAAATCTATTACGACCGCCAATTCCACACCGTCGCCGACCCATTACGCCATTTTTCCGATTCCCTTTCCTCTCTCTCAAACCCAATCGGCTCTGTTTTCGACAAATTTCTAATCGGTTTAACCAGAGCCAGAGTCATTGGCCGCTCCGATGAAGAAATTCTCACCGAAAATGAAGCCTCCACCATGGATTTCTTGACCGGAATCGGCTTCTCCGATTCGATTATCACCCGTTTCTTCCGACCCTTTTTCGGTGGGATTTTCTTTGACACGGATCTAGAAACTTCGTCTCGATTGTTCAATTTCGTTTTCAAATGTCTCGCTCTGGGTGAAAATACTCTCCCGGCGAACGGAATCGGCGCAATTCCTCTCCAACTAGCCGCGAATCTCCCGCCGGAGACCATTCTGCTTAACTCCAGAGTGGTCGATTTGGATTCCGATTCGAAATCGAAATCGTGGGTTGTGAAATTACAGAATGGGGGGATTATAAGGAGCGAAATGGGGGTGATCGTAGCGGTGGAGGAGCCGGCGGCGGAGAGGCTGTTAGCCGGGAGAAGAAAGTTCGGGGTTCGCCGGAAACCGCCGCGGAGCACGACGTGTTTGTATTTCGCGGCGGATCGGGGGAGGATTCCGGTGACGGAACCGGTGTTGTTTTTGAATGGGTCAGGGAAGGGGATTGTGAATAATATGTTCTTTGCGACGAACGTGGCGCCGTCGTACGGGCCGCCGGAGAAGGTGCTGGTTTCGGTGTCGTTGATCGGAAAGTTTGAGGATATCGGCGATGAGGATCTGACGGCTCAGGTTGTTCGGGAGATGGGGGATTGGTTTGGGGAATCGACGGTTGTGGGGTGGAAGCATTTACGGACGTACAGGATTGGGTTTGCACAGCCGGATCAATCTCCACCGTCGGATTCGATGAAGGATCCGACGGTGGAGAGGGGGCTTTACGTGTGTGGGGATTATTTGACTTCTGCGACTTTTGATGGCGCTTTGGTCTCCGGCCGGAAGGCCGTTGAAGCCTTGGTGAGAGATAGAGCCGTCGCTTTGGTATAA

Coding sequence (CDS)

ATGAGTCTCACCGCCGGCACATTCCTCCCCTACCACCGCCACTCCAAAACCCCTTTCCCAAACACTCCCAAATTCAAACCTCGAGCCTCATCCCCATTCCCCCCTTCACAAACCACCACCACCACCACCGGAGTCGTCGTCATCGGCGCCGGCCTCGCCGGACTCGCCGCCGCCACCCACCTCAAGGCCCGAAACATCCCATTCCTCCTCCTCGAAGCCTCCGACGCCGTAGGCGGCCGCGTCCGCACCGACGCCGTCGACGGCTTCCTCCTCGACCGCGGCTTCCAAATCTTCATCACCGCTTACCCAGAAGCCCAATCCCTTCTCAATTACAAATCCCTCAACTTAAACAAATTCTACTCCGGCGCCAAAATCTATTACGACCGCCAATTCCACACCGTCGCCGACCCATTACGCCATTTTTCCGATTCCCTTTCCTCTCTCTCAAACCCAATCGGCTCTGTTTTCGACAAATTTCTAATCGGTTTAACCAGAGCCAGAGTCATTGGCCGCTCCGATGAAGAAATTCTCACCGAAAATGAAGCCTCCACCATGGATTTCTTGACCGGAATCGGCTTCTCCGATTCGATTATCACCCGTTTCTTCCGACCCTTTTTCGGTGGGATTTTCTTTGACACGGATCTAGAAACTTCGTCTCGATTGTTCAATTTCGTTTTCAAATGTCTCGCTCTGGGTGAAAATACTCTCCCGGCGAACGGAATCGGCGCAATTCCTCTCCAACTAGCCGCGAATCTCCCGCCGGAGACCATTCTGCTTAACTCCAGAGTGGTCGATTTGGATTCCGATTCGAAATCGAAATCGTGGGTTGTGAAATTACAGAATGGGGGGATTATAAGGAGCGAAATGGGGGTGATCGTAGCGGTGGAGGAGCCGGCGGCGGAGAGGCTGTTAGCCGGGAGAAGAAAGTTCGGGGTTCGCCGGAAACCGCCGCGGAGCACGACGTGTTTGTATTTCGCGGCGGATCGGGGGAGGATTCCGGTGACGGAACCGGTGTTGTTTTTGAATGGGTCAGGGAAGGGGATTGTGAATAATATGTTCTTTGCGACGAACGTGGCGCCGTCGTACGGGCCGCCGGAGAAGGTGCTGGTTTCGGTGTCGTTGATCGGAAAGTTTGAGGATATCGGCGATGAGGATCTGACGGCTCAGGTTGTTCGGGAGATGGGGGATTGGTTTGGGGAATCGACGGTTGTGGGGTGGAAGCATTTACGGACGTACAGGATTGGGTTTGCACAGCCGGATCAATCTCCACCGTCGGATTCGATGAAGGATCCGACGGTGGAGAGGGGGCTTTACGTGTGTGGGGATTATTTGACTTCTGCGACTTTTGATGGCGCTTTGGTCTCCGGCCGGAAGGCCGTTGAAGCCTTGGTGAGAGATAGAGCCGTCGCTTTGGTATAA

Protein sequence

MSLTAGTFLPYHRHSKTPFPNTPKFKPRASSPFPPSQTTTTTTGVVVIGAGLAGLAAATHLKARNIPFLLLEASDAVGGRVRTDAVDGFLLDRGFQIFITAYPEAQSLLNYKSLNLNKFYSGAKIYYDRQFHTVADPLRHFSDSLSSLSNPIGSVFDKFLIGLTRARVIGRSDEEILTENEASTMDFLTGIGFSDSIITRFFRPFFGGIFFDTDLETSSRLFNFVFKCLALGENTLPANGIGAIPLQLAANLPPETILLNSRVVDLDSDSKSKSWVVKLQNGGIIRSEMGVIVAVEEPAAERLLAGRRKFGVRRKPPRSTTCLYFAADRGRIPVTEPVLFLNGSGKGIVNNMFFATNVAPSYGPPEKVLVSVSLIGKFEDIGDEDLTAQVVREMGDWFGESTVVGWKHLRTYRIGFAQPDQSPPSDSMKDPTVERGLYVCGDYLTSATFDGALVSGRKAVEALVRDRAVALV

Homology

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BLAST of Sed0000618.1 vs. NCBI nr
Match: XP_038905808.1 (15-cis-phytoene desaturase, chloroplastic/chromoplastic [Benincasa hispida])

HSP 1 Score: 730.3 bits (1884), Expect = 1.0e-206
Identity = 376/451 (83.37%), Postives = 400/451 (88.69%), Query Frame = 0


Query: 25  FKPRASS-PFPPSQTTTTTTGVVVIGAGLAGLAAATHLKARNIPFLLLEASDAVGGRVRT 84
           FKP+ SS     S    T TGV++IGAGLAGLAAATHL+++NIPFLLLEASD VGGRVRT
Sbjct: 44  FKPKPSSISLSISPPKPTQTGVIIIGAGLAGLAAATHLRSKNIPFLLLEASDGVGGRVRT 103

Query: 85  DAVDGFLLDRGFQIFITAYPEAQSLLNYKSLNLNKFYSGAKIYYDRQFHTVADPLRHFSD 144
           D VDGFLLDRGFQIFITAYPEAQSLLNYKSL L KFYSGA +YYDRQFHTVADPLRHF D
Sbjct: 104 DLVDGFLLDRGFQIFITAYPEAQSLLNYKSLRLQKFYSGALVYYDRQFHTVADPLRHFID 163

Query: 145 SLSSLSNPIGSVFDKFLIGLTRARVIGRSDEEILTENEASTMDFLTGIGFSDSIITRFFR 204
           SL SLSNPIGSV DK LIGLTRARV+ +SDEEI T +EASTM+FL   GFSDSII+RFFR
Sbjct: 164 SLGSLSNPIGSVSDKLLIGLTRARVLAKSDEEIFTADEASTMNFLRERGFSDSIISRFFR 223

Query: 205 PFFGGIFFDTDLETSSRLFNFVFKCLALGENTLPANGIGAIPLQLAANLPPETILLNSRV 264
           PFFGGIFFDT LETSSRLFNF+FKCLALG+NTLPA+GIGAIP QLAANLPPETILLNSRV
Sbjct: 224 PFFGGIFFDTQLETSSRLFNFIFKCLALGDNTLPADGIGAIPQQLAANLPPETILLNSRV 283

Query: 265 --VDLDSDSKSKSWVVKLQNGGIIRSEMGVIVAVEEPAAERLLAGRRKFGVRRKPPRSTT 324
             VD D +SKSKS +VKLQ+G IIR EMGVIVAVEEP AERLLAG+RK G  RKPPRST 
Sbjct: 284 VSVDFDENSKSKSPIVKLQSGEIIRCEMGVIVAVEEPEAERLLAGKRKMG-NRKPPRSTV 343

Query: 325 CLYFAADRGRIPVTEPVLFLNGSGKGIVNNMFFATNVAPSYGPPEKVLVSVSLIGKFEDI 384
           C+YF ADR RIPV EPVLFLNGSGKGIVNNMFFATNVAPSYGPPEKVLVSVSLIGKFE +
Sbjct: 344 CVYFTADRDRIPVKEPVLFLNGSGKGIVNNMFFATNVAPSYGPPEKVLVSVSLIGKFEGV 403

Query: 385 GDEDLTAQVVREMGDWFGESTVVGWKHLRTYRIGFAQPDQSPPSDSMKDPTVERGLYVCG 444
            DEDLTA+V+REM DWFGESTV GWKHLRTYRIGFAQP+QSPPSD MKDPTVE GLYVCG
Sbjct: 404 EDEDLTAEVIREMSDWFGESTVEGWKHLRTYRIGFAQPNQSPPSDLMKDPTVESGLYVCG 463

Query: 445 DYLTSATFDGALVSGRKAVEALVRDRAVALV 473
           DYLTSATFDGALVSGRKAVEALVRDRAV  V
Sbjct: 464 DYLTSATFDGALVSGRKAVEALVRDRAVIYV 493

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BLAST of Sed0000618.1 vs. NCBI nr
Match: XP_023528974.1 (15-cis-phytoene desaturase, chloroplastic/chromoplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 726.9 bits (1875), Expect = 1.1e-205
Identity = 381/476 (80.04%), Postives = 413/476 (86.76%), Query Frame = 0


Query: 1   MSLTA-GTFLPYHRHSKTPFP-NTPKFKP--RASSPFPPSQTTTTTTGVVVIGAGLAGLA 60
           MS +A GT LP H  S   +P  +  FKP   +SS    S      TGV+V+GAGLAGLA
Sbjct: 1   MSFSAVGTCLPCHSIS---YPRGSLVFKPPHASSSSLSLSPAPPAKTGVIVVGAGLAGLA 60

Query: 61  AATHLKARNIPFLLLEASDAVGGRVRTDAVDGFLLDRGFQIFITAYPEAQSLLNYKSLNL 120
           AATHL+++NIPFLLLEASD VGGRVRTD VDGFLLDRGFQIFITAYPEAQ+LL+Y+SL L
Sbjct: 61  AATHLRSKNIPFLLLEASDGVGGRVRTDFVDGFLLDRGFQIFITAYPEAQALLDYQSLRL 120

Query: 121 NKFYSGAKIYYDRQFHTVADPLRHFSDSLSSLSNPIGSVFDKFLIGLTRARVIGRSDEEI 180
            KFYSGA +Y+D QFHTVADPLRHF+DSL+SL+NPIGSV DK LIGLTRARV+G+SD EI
Sbjct: 121 QKFYSGALVYFDGQFHTVADPLRHFTDSLASLTNPIGSVIDKLLIGLTRARVLGKSDREI 180

Query: 181 LTENEASTMDFLTGIGFSDSIITRFFRPFFGGIFFDTDLETSSRLFNFVFKCLALGENTL 240
            T  EASTM+ L  IGFSDSIITRFFRPFFGGIFFD +LETSSRLFNF+FKCLALGENTL
Sbjct: 181 FTAGEASTMELLKEIGFSDSIITRFFRPFFGGIFFDPELETSSRLFNFIFKCLALGENTL 240

Query: 241 PANGIGAIPLQLAANLPPETILLNSRVVDLDSDSKSKSWVVKLQNGGIIRSEMGVIVAVE 300
           PANGIGAIP QLAANLPPETILLNSRVV +D +SKS   +VKLQ+G II SEMGVIVAVE
Sbjct: 241 PANGIGAIPQQLAANLPPETILLNSRVVSVDFESKSP--IVKLQSGEIIASEMGVIVAVE 300

Query: 301 EPAAERLLAGRRKFGVRRKPPRSTTCLYFAADRGRIPVTEPVLFLNGSGKGIVNNMFFAT 360
           EP AERLLAGRRK G  RKPPRST CLYFAADR RIPV EPVLFLNGSGKGIVNNMFFAT
Sbjct: 301 EPEAERLLAGRRKIG-SRKPPRSTVCLYFAADRDRIPVREPVLFLNGSGKGIVNNMFFAT 360

Query: 361 NVAPSYGPPEKVLVSVSLIGKFEDIGDEDLTAQVVREMGDWFGESTVVGWKHLRTYRIGF 420
           NVAPSYGP EKVLVSVSLIGKFED+GDEDLTA+V+REM DWFGEST+ GWKHLRTYRIGF
Sbjct: 361 NVAPSYGPAEKVLVSVSLIGKFEDVGDEDLTAEVIREMSDWFGESTIEGWKHLRTYRIGF 420

Query: 421 AQPDQSPPSDSMKDPTVERGLYVCGDYLTSATFDGALVSGRKAVEALVRDRAVALV 473
           AQP+QSPPSD MKDPTVE GLYVCGDYLTSATFDGALVSGRKAVEALVR+RAVA V
Sbjct: 421 AQPNQSPPSDLMKDPTVESGLYVCGDYLTSATFDGALVSGRKAVEALVRERAVAYV 470

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BLAST of Sed0000618.1 vs. NCBI nr
Match: XP_008443300.1 (PREDICTED: 15-cis-phytoene desaturase, chloroplastic/chromoplastic [Cucumis melo] >KAA0053850.1 15-cis-phytoene desaturase [Cucumis melo var. makuwa] >TYK25552.1 15-cis-phytoene desaturase [Cucumis melo var. makuwa])

HSP 1 Score: 722.2 bits (1863), Expect = 2.8e-204
Identity = 373/455 (81.98%), Postives = 400/455 (87.91%), Query Frame = 0


Query: 25  FKPRAS-----SPFPPSQTTTTTTGVVVIGAGLAGLAAATHLKARNIPFLLLEASDAVGG 84
           FKPR+S     S  PP  T T+   VV+IGAGLAGLAAATHL+++NIPFLLLEASD VGG
Sbjct: 50  FKPRSSFSISLSLSPPKPTQTS---VVIIGAGLAGLAAATHLRSKNIPFLLLEASDGVGG 109

Query: 85  RVRTDAVDGFLLDRGFQIFITAYPEAQSLLNYKSLNLNKFYSGAKIYYDRQFHTVADPLR 144
           RVRTD VDGFLLDRGFQIFITAYPEAQSLLNY+SL L KFYSGA +YYDRQFHTVADPLR
Sbjct: 110 RVRTDLVDGFLLDRGFQIFITAYPEAQSLLNYQSLRLQKFYSGAFVYYDRQFHTVADPLR 169

Query: 145 HFSDSLSSLSNPIGSVFDKFLIGLTRARVIGRSDEEILTENEASTMDFLTGIGFSDSIIT 204
           HF DSL SLSNPIGSVFDK LIGLTRARV+ ++DEEI T +EAST+DFL  IGFSDSII+
Sbjct: 170 HFIDSLGSLSNPIGSVFDKLLIGLTRARVLAKADEEIFTADEASTIDFLQQIGFSDSIIS 229

Query: 205 RFFRPFFGGIFFDTDLETSSRLFNFVFKCLALGENTLPANGIGAIPLQLAANLPPETILL 264
           RFFRPFFGGIFFDT LETSSRLFNF+FKCLALG+NTLPA+GI AIP QLA NLPPETILL
Sbjct: 230 RFFRPFFGGIFFDTQLETSSRLFNFIFKCLALGDNTLPADGISAIPQQLAFNLPPETILL 289

Query: 265 NSRV--VDLDSDSKSKSWVVKLQNGGIIRSEMGVIVAVEEPAAERLLAGRRKFGVRRKPP 324
           NS+V  VD D  SKSKS +VKLQ+G IIRSEMGVIVAVEEP AERLLAGRRK G  RKPP
Sbjct: 290 NSKVVSVDFDDSSKSKSPIVKLQSGEIIRSEMGVIVAVEEPEAERLLAGRRKIG-NRKPP 349

Query: 325 RSTTCLYFAADRGRIPVTEPVLFLNGSGKGIVNNMFFATNVAPSYGPPEKVLVSVSLIGK 384
           RST C+YF ADR RIPV EPVLFLNGSGKGIVNNMFFATNVAPSYGPP+K LVSVSLIGK
Sbjct: 350 RSTVCVYFTADRDRIPVKEPVLFLNGSGKGIVNNMFFATNVAPSYGPPDKALVSVSLIGK 409

Query: 385 FEDIGDEDLTAQVVREMGDWFGESTVVGWKHLRTYRIGFAQPDQSPPSDSMKDPTVERGL 444
           FE + DEDLTA+V+REMGDWFGESTV GWKHLRTYRI FAQP+QSPP D MKDPTVE GL
Sbjct: 410 FEGVEDEDLTAEVIREMGDWFGESTVEGWKHLRTYRIEFAQPNQSPPWDLMKDPTVENGL 469

Query: 445 YVCGDYLTSATFDGALVSGRKAVEALVRDRAVALV 473
           YVCGDYLTSATFDGALV+GRKAVEALVRDRAV  V
Sbjct: 470 YVCGDYLTSATFDGALVAGRKAVEALVRDRAVIYV 500

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BLAST of Sed0000618.1 vs. NCBI nr
Match: KAG6580911.1 (Protoporphyrinogen oxidase 2, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 721.8 bits (1862), Expect = 3.7e-204
Identity = 371/473 (78.44%), Postives = 409/473 (86.47%), Query Frame = 0


Query: 1   MSLTA-GTFLPYHRHSKTPFPNTPKFKPRASSPFPPSQTTTTTTGVVVIGAGLAGLAAAT 60
           MS +A GT LP H +    +    +    +SS    S    T TGV+V+GAGLAGLAAAT
Sbjct: 1   MSFSAVGTCLPCHYYFLPTWQPRVQASQASSSSLSLSPPVPTKTGVIVVGAGLAGLAAAT 60

Query: 61  HLKARNIPFLLLEASDAVGGRVRTDAVDGFLLDRGFQIFITAYPEAQSLLNYKSLNLNKF 120
           HL+++NIPFLLLEASD VGGRVRTD VDGFLLDRGFQIFITAYPEAQ+LL+Y+SL L KF
Sbjct: 61  HLRSKNIPFLLLEASDGVGGRVRTDLVDGFLLDRGFQIFITAYPEAQALLDYESLRLQKF 120

Query: 121 YSGAKIYYDRQFHTVADPLRHFSDSLSSLSNPIGSVFDKFLIGLTRARVIGRSDEEILTE 180
           YSGA +Y+D +FHTVADPLRHF+DSL+SL+NPIGS+ DK LIGLTRARV+G+SD EI T 
Sbjct: 121 YSGALVYFDGKFHTVADPLRHFTDSLASLTNPIGSLIDKLLIGLTRARVLGKSDREIFTA 180

Query: 181 NEASTMDFLTGIGFSDSIITRFFRPFFGGIFFDTDLETSSRLFNFVFKCLALGENTLPAN 240
            EASTM+ L  IGFSDSIITRFFRPFFGGIFFD +LETSSRLFNF+FKCLALGENTLPAN
Sbjct: 181 GEASTMELLKEIGFSDSIITRFFRPFFGGIFFDPELETSSRLFNFIFKCLALGENTLPAN 240

Query: 241 GIGAIPLQLAANLPPETILLNSRVVDLDSDSKSKSWVVKLQNGGIIRSEMGVIVAVEEPA 300
           GIGAIP QLAANLPPETILLNSRVV +D +SKS   +VKLQ+G II SEMGVIVAVEEP 
Sbjct: 241 GIGAIPQQLAANLPPETILLNSRVVSVDFESKSP--IVKLQSGEIIASEMGVIVAVEEPE 300

Query: 301 AERLLAGRRKFGVRRKPPRSTTCLYFAADRGRIPVTEPVLFLNGSGKGIVNNMFFATNVA 360
           AE+LL GRRK G  RKPPRST CLYFAADR RIPV EPVLFLNGSGKGIVNNMFFATNVA
Sbjct: 301 AEKLLTGRRKIG-SRKPPRSTVCLYFAADRDRIPVREPVLFLNGSGKGIVNNMFFATNVA 360

Query: 361 PSYGPPEKVLVSVSLIGKFEDIGDEDLTAQVVREMGDWFGESTVVGWKHLRTYRIGFAQP 420
           PSYGP EKVLVSVSLIGKFED+GDEDLTA+V+REM DWFGEST+ GWKHLRTYRIGFAQP
Sbjct: 361 PSYGPAEKVLVSVSLIGKFEDVGDEDLTAEVIREMSDWFGESTIEGWKHLRTYRIGFAQP 420

Query: 421 DQSPPSDSMKDPTVERGLYVCGDYLTSATFDGALVSGRKAVEALVRDRAVALV 473
           +QSPPSD MKDPTV+ GLYVCGDYLTSATFDGALVSGR+AVEALVR+RAVA V
Sbjct: 421 NQSPPSDLMKDPTVQSGLYVCGDYLTSATFDGALVSGRRAVEALVRERAVAYV 470

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BLAST of Sed0000618.1 vs. NCBI nr
Match: XP_022934281.1 (15-cis-phytoene desaturase, chloroplastic/chromoplastic [Cucurbita moschata])

HSP 1 Score: 721.1 bits (1860), Expect = 6.3e-204
Identity = 376/476 (78.99%), Postives = 412/476 (86.55%), Query Frame = 0


Query: 1   MSLTA-GTFLPYHRHSKTPFP-NTPKFKP--RASSPFPPSQTTTTTTGVVVIGAGLAGLA 60
           MS +A GT LP H  S   +P  +  FKP   +SS    S    T TGV+V+GAGLAGLA
Sbjct: 1   MSFSAVGTCLPCHSIS---YPRGSLVFKPPQASSSSLSLSPPVPTKTGVIVVGAGLAGLA 60

Query: 61  AATHLKARNIPFLLLEASDAVGGRVRTDAVDGFLLDRGFQIFITAYPEAQSLLNYKSLNL 120
           AATHL++ NIPFLLLEASD VGGRVRTD VDGFLLDRGFQIFITAYPEAQ+LL+Y+SL L
Sbjct: 61  AATHLRSENIPFLLLEASDGVGGRVRTDLVDGFLLDRGFQIFITAYPEAQALLDYESLRL 120

Query: 121 NKFYSGAKIYYDRQFHTVADPLRHFSDSLSSLSNPIGSVFDKFLIGLTRARVIGRSDEEI 180
            KFYSGA +Y+D +FHTVADPLRHF+DSL+SL+NPIGS+ DK LIGLTRARV+G+SD EI
Sbjct: 121 QKFYSGALVYFDGKFHTVADPLRHFTDSLASLTNPIGSLIDKLLIGLTRARVLGKSDREI 180

Query: 181 LTENEASTMDFLTGIGFSDSIITRFFRPFFGGIFFDTDLETSSRLFNFVFKCLALGENTL 240
            T  EASTM+ L  IGFSDSIITRFFRPFFGGIFFD +LETSSRLFNF+FKCLALGENTL
Sbjct: 181 FTAGEASTMELLKEIGFSDSIITRFFRPFFGGIFFDPELETSSRLFNFIFKCLALGENTL 240

Query: 241 PANGIGAIPLQLAANLPPETILLNSRVVDLDSDSKSKSWVVKLQNGGIIRSEMGVIVAVE 300
           PANGIGAIP QLAANLPPETILLNSRVV +D +SKS   +VKLQ+G II SEMGVIVAVE
Sbjct: 241 PANGIGAIPQQLAANLPPETILLNSRVVSVDFESKSP--IVKLQSGEIIASEMGVIVAVE 300

Query: 301 EPAAERLLAGRRKFGVRRKPPRSTTCLYFAADRGRIPVTEPVLFLNGSGKGIVNNMFFAT 360
           EP AE+LL GRRK G  RKPPRST CLYFAADR RIPV EPVLFLNGSGKGIVNNMFFAT
Sbjct: 301 EPEAEKLLTGRRKIG-SRKPPRSTVCLYFAADRDRIPVREPVLFLNGSGKGIVNNMFFAT 360

Query: 361 NVAPSYGPPEKVLVSVSLIGKFEDIGDEDLTAQVVREMGDWFGESTVVGWKHLRTYRIGF 420
           NVAPSYGP EKVLVSVSLIGKFED+GDEDLTA+V+REM DWFGEST+ GWKHLRTYRIGF
Sbjct: 361 NVAPSYGPAEKVLVSVSLIGKFEDVGDEDLTAEVIREMSDWFGESTIEGWKHLRTYRIGF 420

Query: 421 AQPDQSPPSDSMKDPTVERGLYVCGDYLTSATFDGALVSGRKAVEALVRDRAVALV 473
           AQP+QSPPSD MKDPTV+ GLYVCGDYLTSATFDGALVSGR+AVEALVR+RAVA V
Sbjct: 421 AQPNQSPPSDLMKDPTVQSGLYVCGDYLTSATFDGALVSGRRAVEALVRERAVAFV 470

[Close]

BLAST of Sed0000618.1 vs. ExPASy Swiss-Prot
Match: P28554 (15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Solanum lycopersicum OX=4081 GN=PDS PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.0e-10
Identity = 110/484 (22.73%), Postives = 190/484 (39.26%), Query Frame = 0


Query: 30  SSPFPPSQTTTTTTGVVVIGAGLAGLAAATHLKARNIPFLLLEASDAVGGRVRT-DAVDG 89
           SS F  S   T    +V+ GAGL GL+ A +L       +LLEA D +GG+V      DG
Sbjct: 99  SSTFRASPRPTKPLEIVIAGAGLGGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDDDG 158

Query: 90  FLLDRGFQIFITAYPEAQSLLNYKSLNLNKFYSGAKIYYDRQFHTVADPLRHFSDSLSSL 149
              + G  IF  AYP  Q+L     +N    +    + +             FS++L + 
Sbjct: 159 DWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPSKPGEFSRFDFSEALPAP 218

Query: 150 SNPIGSVFD-----------KFLIGLTRARVIGRSDEEILTENEASTMDFLTGIGFSDSI 209
            N I ++             KF IGL  A + G+S  E   ++  S  D++   G  D +
Sbjct: 219 LNGILAILKNNEMLTWPEKVKFAIGLLPAMLGGQSYVE--AQDGISVKDWMRKQGVPDRV 278

Query: 210 ITRFFRPFFGGIFFDTDLETSSRLFNFVFKCLALGENTLPANGIGAIPLQLAANLPPE-- 269
               F      + F    E S        +C+ +  N       G+    L  N PPE  
Sbjct: 279 TDEVFIAMSKALNFINPDELS-------MQCILIALNRFLQEKHGSKMAFLDGN-PPERL 338

Query: 270 -------------TILLNSRV--VDLDSDSKSKSWVVKLQNGGIIRSEMGVIVAVEE--- 329
                         + LNSR+  ++L+ D   KS++  L +G  I  +  V  A  +   
Sbjct: 339 CMPIVEHIESKGGQVRLNSRIKKIELNEDGSVKSFI--LSDGSAIEGDAFVFAAPVDIFK 398

Query: 330 ---PAAERLLAGRRKFGVRRKPPRSTTCLYFAADRGRIPVTEPVLFLNGSGKGIVNNMFF 389
              P   + +   +K       P     ++F  DR      + +LF   S   +  +M  
Sbjct: 399 LLLPEDWKEIPYFQKLEKLVGVPVINVHIWF--DRKLKNTYDHLLFSRSSLLSVYADM-- 458

Query: 390 ATNVAPSYGPPEKVLVSV-SLIGKFEDIGDEDLTAQVVREMGDWF--------GESTVVG 449
           +      Y P + +L  V +   ++    D ++    ++E+   F         ++ ++ 
Sbjct: 459 SVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMKELATLFPDEISADQSKAKILK 518

Query: 450 WKHLRTYRIGFAQPDQSPPSDSMKDPTVERGLYVCGDYLTS---ATFDGALVSGRKAVEA 467
           +  ++T R  +       P   ++   +E G Y+ GDY      A+ +GA++SG+   +A
Sbjct: 519 YHVVKTPRSVYKTVPGCEPCRPLQRSPIE-GFYLAGDYTKQKYLASMEGAVLSGKLCAQA 565

[Close]

BLAST of Sed0000618.1 vs. ExPASy Swiss-Prot
Match: Q8S9J1 (Protoporphyrinogen oxidase 2, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PPOX2 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.3e-07
Identity = 49/169 (28.99%), Postives = 76/169 (44.97%), Query Frame = 0


Query: 45  VVVIGAGLAGLAAATHLKARNIPFLLLEASDAVGGRVRTDAVDGFLLDRGFQIFITAYPE 104
           V V+GAG++GLAAA  LK+R +   + EA   VGG++R+   +G + D G      A PE
Sbjct: 19  VAVVGAGVSGLAAAYKLKSRGLNVTVFEADGRVGGKLRSVMQNGLIWDEGANTMTEAEPE 78

Query: 105 AQSLLNYKSLNLNKFY--SGAKIYYDRQFHTV---ADPLRHFSDSLSSLSNPIGSVFDKF 164
             SLL+   L   + +  S  K Y  R    V    +P+   + S+ S  +    + + F
Sbjct: 79  VGSLLDDLGLREKQQFPISQKKRYIVRNGVPVMLPTNPIELVTSSVLSTQSKFQILLEPF 138

Query: 165 LIGLTRARVIGRSDEEILTENEASTMDFLTGIGFSDSIITRFFRPFFGG 209
           L     ++V   S EE ++E             F   ++     PF GG
Sbjct: 139 LWKKKSSKVSDASAEESVSE--------FFQRHFGQEVVDYLIDPFVGG 179

[Close]

BLAST of Sed0000618.1 vs. ExPASy Swiss-Prot
Match: P56601 (Coproporphyrinogen III oxidase OS=Myxococcus xanthus OX=34 GN=cgoX PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.5e-06
Identity = 28/69 (40.58%), Postives = 44/69 (63.77%), Query Frame = 0


Query: 40  TTTTGVVVIGAGLAGLAAATHLKARNIPFLLLEASDAVGGRVRTDAVDGFLLDRGFQIFI 99
           TT   V V+G G++GLA A HL++R    +LLE+S  +GG V T A+ G+L+++G   F+
Sbjct: 7   TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFL 66

Query: 100 TAYPEAQSL 109
              P  ++L
Sbjct: 67  DREPATRAL 75

[Close]

BLAST of Sed0000618.1 vs. ExPASy Swiss-Prot
Match: A2XDA1 (15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Oryza sativa subsp. indica OX=39946 GN=PDS1 PE=1 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 2.8e-05
Identity = 38/103 (36.89%), Postives = 51/103 (49.51%), Query Frame = 0


Query: 16  KTPFPNTPKF--KPRASSPFPPSQTTTTTTGVVVIGAGLAGLAAATHLKARNIPFLLLEA 75
           + P  NT  F    + SS F  S+  T    VV+ GAGLAGL+ A +L       +LLEA
Sbjct: 76  RPPLENTINFLEAGQLSSFFRNSEQPTKPLQVVIAGAGLAGLSTAKYLADAGHKPILLEA 135

Query: 76  SDAVGGRVRT-DAVDGFLLDRGFQIFITAYPEAQSLLNYKSLN 116
            D +GG++      DG   + G  IF  AYP  Q+L     +N
Sbjct: 136 RDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNIQNLFGELGIN 178

[Close]

BLAST of Sed0000618.1 vs. ExPASy Swiss-Prot
Match: Q0DUI8 (15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PDS PE=3 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 2.8e-05
Identity = 38/103 (36.89%), Postives = 51/103 (49.51%), Query Frame = 0


Query: 16  KTPFPNTPKF--KPRASSPFPPSQTTTTTTGVVVIGAGLAGLAAATHLKARNIPFLLLEA 75
           + P  NT  F    + SS F  S+  T    VV+ GAGLAGL+ A +L       +LLEA
Sbjct: 76  RPPLENTINFLEAGQLSSFFRNSEQPTKPLQVVIAGAGLAGLSTAKYLADAGHKPILLEA 135

Query: 76  SDAVGGRVRT-DAVDGFLLDRGFQIFITAYPEAQSLLNYKSLN 116
            D +GG++      DG   + G  IF  AYP  Q+L     +N
Sbjct: 136 RDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNIQNLFGELGIN 178

[Close]

BLAST of Sed0000618.1 vs. ExPASy TrEMBL
Match: A0A5D3DPT8 (15-cis-phytoene desaturase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007040 PE=4 SV=1)

HSP 1 Score: 722.2 bits (1863), Expect = 1.4e-204
Identity = 373/455 (81.98%), Postives = 400/455 (87.91%), Query Frame = 0


Query: 25  FKPRAS-----SPFPPSQTTTTTTGVVVIGAGLAGLAAATHLKARNIPFLLLEASDAVGG 84
           FKPR+S     S  PP  T T+   VV+IGAGLAGLAAATHL+++NIPFLLLEASD VGG
Sbjct: 50  FKPRSSFSISLSLSPPKPTQTS---VVIIGAGLAGLAAATHLRSKNIPFLLLEASDGVGG 109

Query: 85  RVRTDAVDGFLLDRGFQIFITAYPEAQSLLNYKSLNLNKFYSGAKIYYDRQFHTVADPLR 144
           RVRTD VDGFLLDRGFQIFITAYPEAQSLLNY+SL L KFYSGA +YYDRQFHTVADPLR
Sbjct: 110 RVRTDLVDGFLLDRGFQIFITAYPEAQSLLNYQSLRLQKFYSGAFVYYDRQFHTVADPLR 169

Query: 145 HFSDSLSSLSNPIGSVFDKFLIGLTRARVIGRSDEEILTENEASTMDFLTGIGFSDSIIT 204
           HF DSL SLSNPIGSVFDK LIGLTRARV+ ++DEEI T +EAST+DFL  IGFSDSII+
Sbjct: 170 HFIDSLGSLSNPIGSVFDKLLIGLTRARVLAKADEEIFTADEASTIDFLQQIGFSDSIIS 229

Query: 205 RFFRPFFGGIFFDTDLETSSRLFNFVFKCLALGENTLPANGIGAIPLQLAANLPPETILL 264
           RFFRPFFGGIFFDT LETSSRLFNF+FKCLALG+NTLPA+GI AIP QLA NLPPETILL
Sbjct: 230 RFFRPFFGGIFFDTQLETSSRLFNFIFKCLALGDNTLPADGISAIPQQLAFNLPPETILL 289

Query: 265 NSRV--VDLDSDSKSKSWVVKLQNGGIIRSEMGVIVAVEEPAAERLLAGRRKFGVRRKPP 324
           NS+V  VD D  SKSKS +VKLQ+G IIRSEMGVIVAVEEP AERLLAGRRK G  RKPP
Sbjct: 290 NSKVVSVDFDDSSKSKSPIVKLQSGEIIRSEMGVIVAVEEPEAERLLAGRRKIG-NRKPP 349

Query: 325 RSTTCLYFAADRGRIPVTEPVLFLNGSGKGIVNNMFFATNVAPSYGPPEKVLVSVSLIGK 384
           RST C+YF ADR RIPV EPVLFLNGSGKGIVNNMFFATNVAPSYGPP+K LVSVSLIGK
Sbjct: 350 RSTVCVYFTADRDRIPVKEPVLFLNGSGKGIVNNMFFATNVAPSYGPPDKALVSVSLIGK 409

Query: 385 FEDIGDEDLTAQVVREMGDWFGESTVVGWKHLRTYRIGFAQPDQSPPSDSMKDPTVERGL 444
           FE + DEDLTA+V+REMGDWFGESTV GWKHLRTYRI FAQP+QSPP D MKDPTVE GL
Sbjct: 410 FEGVEDEDLTAEVIREMGDWFGESTVEGWKHLRTYRIEFAQPNQSPPWDLMKDPTVENGL 469

Query: 445 YVCGDYLTSATFDGALVSGRKAVEALVRDRAVALV 473
           YVCGDYLTSATFDGALV+GRKAVEALVRDRAV  V
Sbjct: 470 YVCGDYLTSATFDGALVAGRKAVEALVRDRAVIYV 500

[Close]

BLAST of Sed0000618.1 vs. ExPASy TrEMBL
Match: A0A1S3B8E8 (15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Cucumis melo OX=3656 GN=LOC103486921 PE=4 SV=1)

HSP 1 Score: 722.2 bits (1863), Expect = 1.4e-204
Identity = 373/455 (81.98%), Postives = 400/455 (87.91%), Query Frame = 0


Query: 25  FKPRAS-----SPFPPSQTTTTTTGVVVIGAGLAGLAAATHLKARNIPFLLLEASDAVGG 84
           FKPR+S     S  PP  T T+   VV+IGAGLAGLAAATHL+++NIPFLLLEASD VGG
Sbjct: 50  FKPRSSFSISLSLSPPKPTQTS---VVIIGAGLAGLAAATHLRSKNIPFLLLEASDGVGG 109

Query: 85  RVRTDAVDGFLLDRGFQIFITAYPEAQSLLNYKSLNLNKFYSGAKIYYDRQFHTVADPLR 144
           RVRTD VDGFLLDRGFQIFITAYPEAQSLLNY+SL L KFYSGA +YYDRQFHTVADPLR
Sbjct: 110 RVRTDLVDGFLLDRGFQIFITAYPEAQSLLNYQSLRLQKFYSGAFVYYDRQFHTVADPLR 169

Query: 145 HFSDSLSSLSNPIGSVFDKFLIGLTRARVIGRSDEEILTENEASTMDFLTGIGFSDSIIT 204
           HF DSL SLSNPIGSVFDK LIGLTRARV+ ++DEEI T +EAST+DFL  IGFSDSII+
Sbjct: 170 HFIDSLGSLSNPIGSVFDKLLIGLTRARVLAKADEEIFTADEASTIDFLQQIGFSDSIIS 229

Query: 205 RFFRPFFGGIFFDTDLETSSRLFNFVFKCLALGENTLPANGIGAIPLQLAANLPPETILL 264
           RFFRPFFGGIFFDT LETSSRLFNF+FKCLALG+NTLPA+GI AIP QLA NLPPETILL
Sbjct: 230 RFFRPFFGGIFFDTQLETSSRLFNFIFKCLALGDNTLPADGISAIPQQLAFNLPPETILL 289

Query: 265 NSRV--VDLDSDSKSKSWVVKLQNGGIIRSEMGVIVAVEEPAAERLLAGRRKFGVRRKPP 324
           NS+V  VD D  SKSKS +VKLQ+G IIRSEMGVIVAVEEP AERLLAGRRK G  RKPP
Sbjct: 290 NSKVVSVDFDDSSKSKSPIVKLQSGEIIRSEMGVIVAVEEPEAERLLAGRRKIG-NRKPP 349

Query: 325 RSTTCLYFAADRGRIPVTEPVLFLNGSGKGIVNNMFFATNVAPSYGPPEKVLVSVSLIGK 384
           RST C+YF ADR RIPV EPVLFLNGSGKGIVNNMFFATNVAPSYGPP+K LVSVSLIGK
Sbjct: 350 RSTVCVYFTADRDRIPVKEPVLFLNGSGKGIVNNMFFATNVAPSYGPPDKALVSVSLIGK 409

Query: 385 FEDIGDEDLTAQVVREMGDWFGESTVVGWKHLRTYRIGFAQPDQSPPSDSMKDPTVERGL 444
           FE + DEDLTA+V+REMGDWFGESTV GWKHLRTYRI FAQP+QSPP D MKDPTVE GL
Sbjct: 410 FEGVEDEDLTAEVIREMGDWFGESTVEGWKHLRTYRIEFAQPNQSPPWDLMKDPTVENGL 469

Query: 445 YVCGDYLTSATFDGALVSGRKAVEALVRDRAVALV 473
           YVCGDYLTSATFDGALV+GRKAVEALVRDRAV  V
Sbjct: 470 YVCGDYLTSATFDGALVAGRKAVEALVRDRAVIYV 500

[Close]

BLAST of Sed0000618.1 vs. ExPASy TrEMBL
Match: A0A6J1F1E0 (15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Cucurbita moschata OX=3662 GN=LOC111441491 PE=4 SV=1)

HSP 1 Score: 721.1 bits (1860), Expect = 3.0e-204
Identity = 376/476 (78.99%), Postives = 412/476 (86.55%), Query Frame = 0


Query: 1   MSLTA-GTFLPYHRHSKTPFP-NTPKFKP--RASSPFPPSQTTTTTTGVVVIGAGLAGLA 60
           MS +A GT LP H  S   +P  +  FKP   +SS    S    T TGV+V+GAGLAGLA
Sbjct: 1   MSFSAVGTCLPCHSIS---YPRGSLVFKPPQASSSSLSLSPPVPTKTGVIVVGAGLAGLA 60

Query: 61  AATHLKARNIPFLLLEASDAVGGRVRTDAVDGFLLDRGFQIFITAYPEAQSLLNYKSLNL 120
           AATHL++ NIPFLLLEASD VGGRVRTD VDGFLLDRGFQIFITAYPEAQ+LL+Y+SL L
Sbjct: 61  AATHLRSENIPFLLLEASDGVGGRVRTDLVDGFLLDRGFQIFITAYPEAQALLDYESLRL 120

Query: 121 NKFYSGAKIYYDRQFHTVADPLRHFSDSLSSLSNPIGSVFDKFLIGLTRARVIGRSDEEI 180
            KFYSGA +Y+D +FHTVADPLRHF+DSL+SL+NPIGS+ DK LIGLTRARV+G+SD EI
Sbjct: 121 QKFYSGALVYFDGKFHTVADPLRHFTDSLASLTNPIGSLIDKLLIGLTRARVLGKSDREI 180

Query: 181 LTENEASTMDFLTGIGFSDSIITRFFRPFFGGIFFDTDLETSSRLFNFVFKCLALGENTL 240
            T  EASTM+ L  IGFSDSIITRFFRPFFGGIFFD +LETSSRLFNF+FKCLALGENTL
Sbjct: 181 FTAGEASTMELLKEIGFSDSIITRFFRPFFGGIFFDPELETSSRLFNFIFKCLALGENTL 240

Query: 241 PANGIGAIPLQLAANLPPETILLNSRVVDLDSDSKSKSWVVKLQNGGIIRSEMGVIVAVE 300
           PANGIGAIP QLAANLPPETILLNSRVV +D +SKS   +VKLQ+G II SEMGVIVAVE
Sbjct: 241 PANGIGAIPQQLAANLPPETILLNSRVVSVDFESKSP--IVKLQSGEIIASEMGVIVAVE 300

Query: 301 EPAAERLLAGRRKFGVRRKPPRSTTCLYFAADRGRIPVTEPVLFLNGSGKGIVNNMFFAT 360
           EP AE+LL GRRK G  RKPPRST CLYFAADR RIPV EPVLFLNGSGKGIVNNMFFAT
Sbjct: 301 EPEAEKLLTGRRKIG-SRKPPRSTVCLYFAADRDRIPVREPVLFLNGSGKGIVNNMFFAT 360

Query: 361 NVAPSYGPPEKVLVSVSLIGKFEDIGDEDLTAQVVREMGDWFGESTVVGWKHLRTYRIGF 420
           NVAPSYGP EKVLVSVSLIGKFED+GDEDLTA+V+REM DWFGEST+ GWKHLRTYRIGF
Sbjct: 361 NVAPSYGPAEKVLVSVSLIGKFEDVGDEDLTAEVIREMSDWFGESTIEGWKHLRTYRIGF 420

Query: 421 AQPDQSPPSDSMKDPTVERGLYVCGDYLTSATFDGALVSGRKAVEALVRDRAVALV 473
           AQP+QSPPSD MKDPTV+ GLYVCGDYLTSATFDGALVSGR+AVEALVR+RAVA V
Sbjct: 421 AQPNQSPPSDLMKDPTVQSGLYVCGDYLTSATFDGALVSGRRAVEALVRERAVAFV 470

[Close]

BLAST of Sed0000618.1 vs. ExPASy TrEMBL
Match: A0A6J1J6U4 (phytoene dehydrogenase, chloroplastic/chromoplastic OS=Cucurbita maxima OX=3661 GN=LOC111482288 PE=4 SV=1)

HSP 1 Score: 720.3 bits (1858), Expect = 5.2e-204
Identity = 376/476 (78.99%), Postives = 411/476 (86.34%), Query Frame = 0


Query: 1   MSLTA-GTFLPYHRHSKTPFP-NTPKFKP--RASSPFPPSQTTTTTTGVVVIGAGLAGLA 60
           MS +A GT LP H      +P  +  FKP   +SS    S    T TGV+V+GAGLAGLA
Sbjct: 1   MSFSAVGTCLPCH---SIAYPRGSLGFKPPQASSSSLSLSPPVPTKTGVIVVGAGLAGLA 60

Query: 61  AATHLKARNIPFLLLEASDAVGGRVRTDAVDGFLLDRGFQIFITAYPEAQSLLNYKSLNL 120
           AATHL+++NIPFLLLEASD VGGRVRTD VDGFLLDRGFQIFITAYPEA++LL+Y+SL L
Sbjct: 61  AATHLRSKNIPFLLLEASDGVGGRVRTDLVDGFLLDRGFQIFITAYPEAKALLDYQSLRL 120

Query: 121 NKFYSGAKIYYDRQFHTVADPLRHFSDSLSSLSNPIGSVFDKFLIGLTRARVIGRSDEEI 180
            KFYSGA +Y+D QFHTVADPLRHF+DSL+SL+NPIGS+ DK LIGLTRARV+G+SD EI
Sbjct: 121 QKFYSGALVYFDGQFHTVADPLRHFTDSLASLTNPIGSLIDKLLIGLTRARVLGKSDREI 180

Query: 181 LTENEASTMDFLTGIGFSDSIITRFFRPFFGGIFFDTDLETSSRLFNFVFKCLALGENTL 240
            T  EASTM+ L  IGFSDSIITRFFRPFFGGIFFD +LETSSRLFNF+FKCLALGENTL
Sbjct: 181 FTAGEASTMELLKEIGFSDSIITRFFRPFFGGIFFDPELETSSRLFNFIFKCLALGENTL 240

Query: 241 PANGIGAIPLQLAANLPPETILLNSRVVDLDSDSKSKSWVVKLQNGGIIRSEMGVIVAVE 300
           PANGI AIP QLAANLPPETILLNSRVV +D +SKS   +VKLQ+G II SEMGVIVAVE
Sbjct: 241 PANGISAIPQQLAANLPPETILLNSRVVSVDFESKSP--IVKLQSGEIIASEMGVIVAVE 300

Query: 301 EPAAERLLAGRRKFGVRRKPPRSTTCLYFAADRGRIPVTEPVLFLNGSGKGIVNNMFFAT 360
           EP AERLL GRRK G  RKPPRST CLYFAADR RIPV EPVLFLNGSGKGIVNNMFFAT
Sbjct: 301 EPEAERLLTGRRKIG-SRKPPRSTVCLYFAADRDRIPVREPVLFLNGSGKGIVNNMFFAT 360

Query: 361 NVAPSYGPPEKVLVSVSLIGKFEDIGDEDLTAQVVREMGDWFGESTVVGWKHLRTYRIGF 420
           NVAPSYGP EKVLVSVSLIGKFED+GDEDLTA+V+REM DWFG+ST+ GWKHLRTYRIGF
Sbjct: 361 NVAPSYGPAEKVLVSVSLIGKFEDVGDEDLTAEVIREMADWFGQSTIEGWKHLRTYRIGF 420

Query: 421 AQPDQSPPSDSMKDPTVERGLYVCGDYLTSATFDGALVSGRKAVEALVRDRAVALV 473
           AQP+QSPPSD MKDPTVE GLYVCGDYLTSATFDGALVSGRKAVEALVR+RAVA V
Sbjct: 421 AQPNQSPPSDLMKDPTVESGLYVCGDYLTSATFDGALVSGRKAVEALVRERAVAYV 470

[Close]

BLAST of Sed0000618.1 vs. ExPASy TrEMBL
Match: A0A0A0LCJ0 (Amino_oxidase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G822340 PE=4 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 1.4e-201
Identity = 374/477 (78.41%), Postives = 403/477 (84.49%), Query Frame = 0


Query: 1   MSLTAGT-FLPYHRHSKTPFPNTPKFKPRASSPFPPSQT--TTTTTGVVVIGAGLAGLAA 60
           MS+ A T  L Y  HS         FKP++SS    S +    T T VVVIGAGLAGLAA
Sbjct: 1   MSVAAPTSMLSYSIHSHR---RLHLFKPKSSSSISLSLSPPKPTQTSVVVIGAGLAGLAA 60

Query: 61  ATHLKARNIPFLLLEASDAVGGRVRTDAVDGFLLDRGFQIFITAYPEAQSLLNYKSLNLN 120
           ATHL+++NIPF+LLEASD VGGRVRTD VDGFLLDRGFQIFITAYPEAQSLLNY+SL L 
Sbjct: 61  ATHLRSKNIPFILLEASDGVGGRVRTDLVDGFLLDRGFQIFITAYPEAQSLLNYQSLRLQ 120

Query: 121 KFYSGAKIYYDRQFHTVADPLRHFSDSLSSLSNPIGSVFDKFLIGLTRARVIGRSDEEIL 180
           KFYSGA +Y+DRQFHTVADPLRHF DSL SLSNPIGSV DK LIGLTRARV+ +SDEEI 
Sbjct: 121 KFYSGALVYHDRQFHTVADPLRHFIDSLGSLSNPIGSVLDKLLIGLTRARVLAKSDEEIF 180

Query: 181 TENEASTMDFLTGIGFSDSIITRFFRPFFGGIFFDTDLETSSRLFNFVFKCLALGENTLP 240
           T +E ST+D L  IGFSDSII+RFFRPFFGGIFFDT LETSSRLFNF+FKCLALG NTLP
Sbjct: 181 TADEVSTIDLLKQIGFSDSIISRFFRPFFGGIFFDTQLETSSRLFNFIFKCLALGNNTLP 240

Query: 241 ANGIGAIPLQLAANLPPETILLNSRV--VDLDSDSKSKSWVVKLQNGGIIRSEMGVIVAV 300
            +GIGAIP QLA+NLPPETILLNS+V  VD D  SKSKS +VKLQ+G IIRSEMGVIVAV
Sbjct: 241 VDGIGAIPQQLASNLPPETILLNSKVVSVDFDDSSKSKSPIVKLQSGEIIRSEMGVIVAV 300

Query: 301 EEPAAERLLAGRRKFGVRRKPPRSTTCLYFAADRGRIPVTEPVLFLNGSGKGIVNNMFFA 360
           EEP A RLLAGR+K G  RKPPRST C+YF  DR RIPV EPVLFLNGSGKGIVNNMFFA
Sbjct: 301 EEPEAGRLLAGRKKIG-NRKPPRSTVCVYFTTDRERIPVKEPVLFLNGSGKGIVNNMFFA 360

Query: 361 TNVAPSYGPPEKVLVSVSLIGKFEDIGDEDLTAQVVREMGDWFGESTVVGWKHLRTYRIG 420
           TNVAPSYGPPEK LVSVSLIGKFE + DEDLTA+V+REMGDWFGESTV GWKHLRTYRI 
Sbjct: 361 TNVAPSYGPPEKALVSVSLIGKFEGVEDEDLTAEVIREMGDWFGESTVEGWKHLRTYRIE 420

Query: 421 FAQPDQSPPSDSMKDPTVERGLYVCGDYLTSATFDGALVSGRKAVEALVRDRAVALV 473
           FAQP+QSPP D MKDPTVE GLYVCGDYLTSATFDGALV+GRKAVEALVRDRAV  V
Sbjct: 421 FAQPNQSPPWDVMKDPTVENGLYVCGDYLTSATFDGALVAGRKAVEALVRDRAVIYV 473

[Close]

BLAST of Sed0000618.1 vs. TAIR 10
Match: AT3G09580.1 (FAD/NAD(P)-binding oxidoreductase family protein )

HSP 1 Score: 558.9 bits (1439), Expect = 3.9e-159
Identity = 282/427 (66.04%), Postives = 346/427 (81.03%), Query Frame = 0


Query: 43  TGVVVIGAGLAGLAAATHLKARNIPFLLLEASDAVGGRVRTDAVDGFLLDRGFQIFITAY 102
           TGV++IGAGLAGLAAA  L ++ IPFLLLEASD VGGRVRTD VDGF LDRGFQIFITAY
Sbjct: 47  TGVIIIGAGLAGLAAANQLTSKRIPFLLLEASDGVGGRVRTDIVDGFFLDRGFQIFITAY 106

Query: 103 PEAQSLLNYKSLNLNKFYSGAKIYYDRQFHTVADPLRHFSDSLSSLSNPIGSVFDKFLIG 162
           PEA+ LL+Y++L+L +FY+GAK++Y  +FHTVADPLRHF DS++SL+NPIGSV DK LI 
Sbjct: 107 PEAKKLLDYEALDLQRFYAGAKVFYGGKFHTVADPLRHFWDSVASLANPIGSVVDKGLIA 166

Query: 163 LTRARVIGRSDEEILT-ENEASTMDFLTGIGFSDSIITRFFRPFFGGIFFDTDLETSSRL 222
           LTRARV+ +SDEEILT  +E  T+D L  IGFS++I+ RFFRPFFGGIFFD DLET+S+L
Sbjct: 167 LTRARVLIKSDEEILTAADEVPTIDLLRKIGFSETILDRFFRPFFGGIFFDRDLETTSKL 226

Query: 223 FNFVFKCLALGENTLPANGIGAIPLQLAANLPPETILLNSRVVDLD--SDSKSKSWVVKL 282
           F+FVF+CLALGENTLPA GIG I  QLAA LP +++LLN+RV  ++  + S S    V+L
Sbjct: 227 FDFVFRCLALGENTLPAMGIGEISNQLAAKLPAKSVLLNTRVASIEYPNGSGSDPPSVRL 286

Query: 283 QNGGIIRSEMGVIVAVEEPAAERLLAGRRKFGVRRKPPRSTTCLYFAADRGRIPVTEPVL 342
           Q+G ++++E+GVI+AVE+P   +LL G R   V  KP RST CLYF A+  +IPV +PVL
Sbjct: 287 QDGSVMKAELGVIIAVEQPEVNKLLDGIRD-PVITKPARSTICLYFTAEPNQIPVQDPVL 346

Query: 343 FLNGSGKGIVNNMFFATNVAPSYGPPEKVLVSVSLIGKFEDIGDEDLTAQVVREMGDWFG 402
           FLNGS  GI+NNMFFATNVA +Y PP K LVSVSLIG FED  D+DL A+V+RE+  WFG
Sbjct: 347 FLNGSNSGIINNMFFATNVARTYAPPGKALVSVSLIGLFEDRTDDDLAAEVLRELSGWFG 406

Query: 403 ESTVVGWKHLRTYRIGFAQPDQSPPSDSMKDPTVERGLYVCGDYLTSATFDGALVSGRKA 462
           ES V+ WKHL+TYRI FAQP+Q PP+D +K P V  GLY+ GDY+TSATFDGALVSGR+A
Sbjct: 407 ESPVMSWKHLKTYRIQFAQPNQCPPTDLVKSPRVGSGLYLSGDYMTSATFDGALVSGRRA 466

Query: 463 VEALVRD 467
           VE L+R+
Sbjct: 467 VEVLLRE 472

[Close]

BLAST of Sed0000618.1 vs. TAIR 10
Match: AT5G14220.1 (Flavin containing amine oxidoreductase family )

HSP 1 Score: 58.5 bits (140), Expect = 1.6e-08
Identity = 49/169 (28.99%), Postives = 76/169 (44.97%), Query Frame = 0


Query: 45  VVVIGAGLAGLAAATHLKARNIPFLLLEASDAVGGRVRTDAVDGFLLDRGFQIFITAYPE 104
           V V+GAG++GLAAA  LK+R +   + EA   VGG++R+   +G + D G      A PE
Sbjct: 19  VAVVGAGVSGLAAAYKLKSRGLNVTVFEADGRVGGKLRSVMQNGLIWDEGANTMTEAEPE 78

Query: 105 AQSLLNYKSLNLNKFY--SGAKIYYDRQFHTV---ADPLRHFSDSLSSLSNPIGSVFDKF 164
             SLL+   L   + +  S  K Y  R    V    +P+   + S+ S  +    + + F
Sbjct: 79  VGSLLDDLGLREKQQFPISQKKRYIVRNGVPVMLPTNPIELVTSSVLSTQSKFQILLEPF 138

Query: 165 LIGLTRARVIGRSDEEILTENEASTMDFLTGIGFSDSIITRFFRPFFGG 209
           L     ++V   S EE ++E             F   ++     PF GG
Sbjct: 139 LWKKKSSKVSDASAEESVSE--------FFQRHFGQEVVDYLIDPFVGG 179

[Close]

BLAST of Sed0000618.1 vs. TAIR 10
Match: AT5G14220.2 (Flavin containing amine oxidoreductase family )

HSP 1 Score: 53.5 bits (127), Expect = 5.3e-07
Identity = 28/66 (42.42%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 45  VVVIGAGLAGLAAATHLKARNIPFLLLEASDAVGGRVRTDAVDGFLLDRGFQIFITAYPE 104
           V V+GAG++GLAAA  LK+R +   + EA   VGG++R+   +G + D G      A PE
Sbjct: 19  VAVVGAGVSGLAAAYKLKSRGLNVTVFEADGRVGGKLRSVMQNGLIWDEGANTMTEAEPE 78

Query: 105 AQSLLN 111
             SLL+
Sbjct: 79  VGSLLD 84

[Close]

BLAST of Sed0000618.1 vs. TAIR 10
Match: AT4G14210.1 (phytoene desaturase 3 )

HSP 1 Score: 48.5 bits (114), Expect = 1.7e-05
Identity = 73/303 (24.09%), Postives = 111/303 (36.63%), Query Frame = 0


Query: 21  NTPKFKPRA--SSPFPPSQTTTTTTGVVVIGAGLAGLAAATHLKARNIPFLLLEASDAVG 80
           NT  F   A  S+ F  +        VV+ GAGLAGL+ A +L       LLLEA D +G
Sbjct: 69  NTVNFLEAASLSASFRSAPRPAKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 128

Query: 81  GRVRT-DAVDGFLLDRGFQIFITAYPEAQSLLNYKSLNLNKFYSGAKIYYDRQFHTVADP 140
           G++      DG   + G  IF  AYP  Q+L     +N    +    + +          
Sbjct: 129 GKIAAWKDEDGDWYETGLHIFFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPSKPGEFS 188

Query: 141 LRHFSDSLSSLSNPIGSVFD-----------KFLIGLTRARVIGRSDEEILTENEASTMD 200
              F D L +  N I ++             KF IGL  A V G++  E   ++  S  +
Sbjct: 189 RFDFPDVLPAPLNGIWAILRNNEMLTWPEKIKFAIGLLPAMVGGQAYVE--AQDGLSVKE 248

Query: 201 FLTGIGFSDSIITRFFRPFFGGIFFDTDLETSSRLFNFVFKCLALGENTLPANGIGAIPL 260
           ++   G  + +    F      + F    E S        +C+ +  N       G+   
Sbjct: 249 WMEKQGVPERVTDEVFIAMSKALNFINPDELS-------MQCILIALNRFLQEKHGSKMA 308

Query: 261 QLAANLPPE---------------TILLNSRVVDLDSDSKSKSWVVKLQNGGIIRSEMGV 295
            L  N PPE                + LNSR+  ++ +         L NG  +  +  V
Sbjct: 309 FLDGN-PPERLCMPVVDHIRSLGGEVQLNSRIKKIELNDDGTVKSFLLTNGSTVEGDAYV 361

[Close]

BLAST of Sed0000618.1 vs. TAIR 10
Match: AT4G14210.2 (phytoene desaturase 3 )

HSP 1 Score: 48.5 bits (114), Expect = 1.7e-05
Identity = 36/98 (36.73%), Postives = 47/98 (47.96%), Query Frame = 0


Query: 21  NTPKFKPRA--SSPFPPSQTTTTTTGVVVIGAGLAGLAAATHLKARNIPFLLLEASDAVG 80
           NT  F   A  S+ F  +        VV+ GAGLAGL+ A +L       LLLEA D +G
Sbjct: 69  NTVNFLEAASLSASFRSAPRPAKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 128

Query: 81  GRVRT-DAVDGFLLDRGFQIFITAYPEAQSLLNYKSLN 116
           G++      DG   + G  IF  AYP  Q+L     +N
Sbjct: 129 GKIAAWKDEDGDWYETGLHIFFGAYPNVQNLFGELGIN 166

The following BLAST results are available for this feature:

BLAST of Sed0000618.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905808.1	1.0e-206	83.37	15-cis-phytoene desaturase, chloroplastic/chromoplastic [Benincasa hispida]	[more]
XP_023528974.1	1.1e-205	80.04	15-cis-phytoene desaturase, chloroplastic/chromoplastic [Cucurbita pepo subsp. p...	[more]
XP_008443300.1	2.8e-204	81.98	PREDICTED: 15-cis-phytoene desaturase, chloroplastic/chromoplastic [Cucumis melo...	[more]
KAG6580911.1	3.7e-204	78.44	Protoporphyrinogen oxidase 2, chloroplastic/mitochondrial, partial [Cucurbita ar...	[more]
XP_022934281.1	6.3e-204	78.99	15-cis-phytoene desaturase, chloroplastic/chromoplastic [Cucurbita moschata]	[more]

BLAST of Sed0000618.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P28554	1.0e-10	22.73	15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Solanum lycopersicum ...	[more]
Q8S9J1	2.3e-07	28.99	Protoporphyrinogen oxidase 2, chloroplastic/mitochondrial OS=Arabidopsis thalian...	[more]
P56601	1.5e-06	40.58	Coproporphyrinogen III oxidase OS=Myxococcus xanthus OX=34 GN=cgoX PE=1 SV=1	[more]
A2XDA1	2.8e-05	36.89	15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Oryza sativa subsp. i...	[more]
Q0DUI8	2.8e-05	36.89	15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Oryza sativa subsp. j...	[more]

BLAST of Sed0000618.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DPT8	1.4e-204	81.98	15-cis-phytoene desaturase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3B8E8	1.4e-204	81.98	15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Cucumis melo OX=3656 ...	[more]
A0A6J1F1E0	3.0e-204	78.99	15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Cucurbita moschata OX...	[more]
A0A6J1J6U4	5.2e-204	78.99	phytoene dehydrogenase, chloroplastic/chromoplastic OS=Cucurbita maxima OX=3661 ...	[more]
A0A0A0LCJ0	1.4e-201	78.41	Amino_oxidase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G8223...	[more]

BLAST of Sed0000618.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09580.1	3.9e-159	66.04	FAD/NAD(P)-binding oxidoreductase family protein	[more]
AT5G14220.1	1.6e-08	28.99	Flavin containing amine oxidoreductase family	[more]
AT5G14220.2	5.3e-07	42.42	Flavin containing amine oxidoreductase family	[more]
AT4G14210.1	1.7e-05	24.09	phytoene desaturase 3	[more]
AT4G14210.2	1.7e-05	36.73	phytoene desaturase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.660.10		coord: 317..424 e-value: 5.4E-8 score: 34.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..39
None	No IPR available	PANTHER	PTHR42841:SF5	FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN	coord: 41..470
None	No IPR available	PANTHER	PTHR42841	AMINE OXIDASE	coord: 41..470
IPR036188	FAD/NAD(P)-binding domain superfamily	GENE3D	3.50.50.60		coord: 36..206 e-value: 3.7E-19 score: 70.4
IPR036188	FAD/NAD(P)-binding domain superfamily	GENE3D	3.50.50.60		coord: 255..462 e-value: 5.4E-8 score: 34.9
IPR036188	FAD/NAD(P)-binding domain superfamily	SUPERFAMILY	51905	FAD/NAD(P)-binding domain	coord: 41..465
IPR002937	Amine oxidase	PFAM	PF01593	Amino_oxidase	coord: 52..463 e-value: 3.4E-39 score: 135.4

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0000618	Sed0000618	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0000618.1-five_prime_utr	Sed0000618.1-five_prime_utr-LG12:7322860..7324372	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0000618.1-exon	Sed0000618.1-exon-LG12:7322860..7325791	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0000618.1-cds	Sed0000618.1-cds-LG12:7324373..7325791	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0000618.1	Sed0000618.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding