Pay0019985.1 (mRNA) Melon (Payzawat) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAATATATAAAAAGAAAAACACCCTTCACCTTCACTGTCAAAAGCTGCAAAATTTCCGACATCTTCTTCCTTATCTCCGCCGTGATGTCCACCGCCGACCGCCGTAGCAGACCGCACAAACTTTCAGAATAACACGTCAATCTGTCAGAGGCTGACTGGGCCGAAGAGTACCCTCAGGGTGAGACACTCCCACAGAATATTCAGACACATCACCTCTCCTCCACCGGTACTTCCGGTTGCCTCTCTCTGTCTATATATTATTTTGATTTTTCTTTTCTCTTGCTCTTTTTCCCCCCTCAAATTATTTCCTCTTTTACAAGGAAATTAAATTTTGCTTAATTGCTTTCCATTTTAGATTCCAATATTTGCCATAAAGGAAAAAAGATAAAAAAAAAATCAAATCCAAGGTGGATTTGATAGTGTCCTCTTTCTATTTTGTTAAGTAAAGTATTTTTCTTATTAGTATATACTTAAAAAAAAATTGTTGTATTGTAGGAGTCATATAAGTTAATATGACTATATTTTCTGACTAATAAATTTACTTGTACGTTATTAATGAATAAATTAGGGTAGGGATTAACAAGTGTGAAAGGACAAATTATAGGAATAATCATGAAATATTTTAATCTACATATAAAAGAAAAGGAGAGAGAGAATTGGTTTTATTAAAAGTAGATTAAAATAATAATTGATTAATTAATTTAGGTTTAAAGATAAAGAAAAATAATATTAAAAATTGATTTGGGAGTGTTTTCCTTTCCCGCATATTTGTCTGTTTCTTTACTTTCCCGTTAACCGTCCGCTTTTGTGAATTACAATTTCCTCTTTTCTTTAATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTCGTTCTCTCTCAAATTAAAGCGATTATGATGGAGTGGGAAAAGCCTGAGCAGCAAAATCCTTACCACCACCACCACAACCCTCCTCTTTGTGACGATCATCTCCATCACCTCACTGGAACAACGGCCGCCGGGGCTCTCTACGTCAAAGTCATGACCGACGACCAATTGGAGACTCTTCGCAAACAAATTGCTGTTTACGCCACCATTTGCGAGCAGCTTGTTGAGATGCACAAGACCCTTACTGCTCACCAGGATCTCACAGGTACCTTACTCTAAATTAATTAAAATGCTCTTTCATTAATTTCTTCTACTTCTTCTTTCAATCCAATCCCCCTAATTAATTGTTTAAGCCTTACACACCTACTACCCCCTGTATTGTTGGTTATACTGCTGTTTGATTTTTTGGAATTGCCTCTTTTTAGTTTCCACTCGATTCATAGATTATTGAATTTTGATTCCTAGTATTTTATTGTATCATTGCATGTGTTTATGGTGCAACCTCTCGAGGTCTTGTTCTTGTTCATGATTTTTTTAAATTTTGGAAATGCGTGCAAATATTTGGTGATTTCGAGCAGCTAACAGTTACCTCAAAAAAAGGGCAAATATCTAAGTCTGTAACTAAGACTACTACCGGTTTCCCTTTTCTTGATGGCTATCCAACTTTTTTGTGGTCCTTTTGGCTCTGGTATCCATCCCTGCCGTAAAGTAACCATTTCCCCTCTCCTTCATTGTTTGCAGCATGTGTGTCTTTATTAAGAGGCGCTTTAGTAACCATTTAGTAATCCACTTTATATAAATATATGTGTATGTTTTCAGAACCAATTCATGAGTATTCTTGGAAGAAGTGAAAATTTTCAATTTAAAATGAAAAGAAAAAAGTAATTGAGAGATTTATTTTCTTTAGCAATTGATTAAGGGGTTCAATACTAAACAATTATTTGTAAATTGAATAAGCCAGTTGAAGATCGGAGAGTTTTGATAATGTGATCTTAATGGATTTTGGATTACGATGGTTGTAAAAGTATGCCTTTGACTTGAAACTTGCTTTCTACTCCACCTGTATGATCTTGGAGACAATCTGATGAATCTCCCTCTATGCACTCGCTTAAAGCTTGTGTCTTGCTGCTTTTCAGGAATGAGGTTGGGTAATATGTACTGTGAACCATTGATGACATCTTCCAGCCACAAAATCACTTCTAGACAGAGGTGGACTCCGACACCTGTGCAGCTTCAGATCTTAGAGCGTATATTCGACCAAGGGAATGGGACTCCCAGCAAGCAAAAGATCAAAGAGATAACCGCTGAACTGGGGCAGCATGGCCAAATTTCTGAATCTAATGTCTATAACTGGTTCCAAAACAGGCGTGCTCGATCGAAGAGAAAGCAGCAAAGTGCCCCACCTGCCTATGGCGAATCAGAAGTGGAGACAGAAGTTGAATCACCAAAAGATAAGAAGACGAAACCTGTGGATTTTCAAACTAATCAATCCTCTGCACCTTTAGGGGACGACATGTGCTTTCAGAGTCCGGAGATGAGTTCTGAACTGCATTTCCTGGATCCAAACACCAACAAAGCTGATACTTTGTTTCCTTCAAATGGAAGTTTAAAAACGGCAAGAAGCTTCGGCCAGATGTCTTTTTATGAGGGTATGCCATAAGAGTTTTTTGTCACTCTTTCATATGTTCTATTACTCATCTTTTTGCCTGATTTAACCTTGTCTTGTCATATTACGTGGAGGATTGAGGGAAGTATTAAACTCGTCGATTTCTCAAAAACTTACTGATTAGAGCATACAAACGTAAACTTCTGAATCCTGTTTTGCTAGGGATCACCTTCTTTTTCTTTTGATATCCCCAAAATGACAAGAATGTTCAAGTAAAAAATGATTTGCTAACTTTCTACCTCTTGGTGCATATAAATTAAGAAGATCCTCATTTGACTATTGTTTGCTTGGATCTCCATCTCTTTCACACAGAGGATATAAAATTGAATATGTGCTTTTCTTTTTGAAATGGATTTCAGCTGGGAATGAGCAGCTGACAGGAAAGATTGAAACGCCAGAGAACTATAGTATCTACCAGCAAGCAGAAGGCTACAACATGACGGGACGACCATGAATTCTTACACAATTAACACGAGGTGTAGTTGTGATATTACGAATGTGCTGGACTTCTGGCTCTCGTGTGAATGCACTTAGTCTAACATTGAAGGAGACGGTGATGACGATGACGAATGATGCTGACTTGTGTGCTCGTATCTTGTCGTGGATTGTCGGAGTATACAGTTTTGAGTGATGTATTTTGGTTGGATTGTGTTTGGAAGCATTGGGAGTTTTGATTGGTTGATTTGATTGAGCAATTCAGAGTCTTGTGAGTTAGTTAAACGTGACCCCTTAAGAGGAGAGAATGTATGGTATCCATTTGTAAGTGTTTGTATTAAAAAGATGATTGCTTAAATGATCCTAATTGATAGTAGAATGGGCACACCCTCGTTCTCTCTAGTATTAACCGTTAAAAAAGAAAAAGTTAAGCATAGGCATTTTAACTTACTTAGTCGACCAGTTAAACAAACTAATTTAGCTAATGCCAATAATGATTAAATTTAAGAGGGTTAAATAAACTATTTAATCATCCTTTATTGGCTTTAACTATTTCACAACTACTACTAGTAGGTAGGATTATTTGGTACAGCTGTTAATATATTTAGTTCAAAGGCCATGAATATTGTTATATATTTGATCTTATTTTTAACTTTTTCCTTCTTACTTAATTTGATTGAAAC CAAATATATAAAAAGAAAAACACCCTTCACCTTCACTGTCAAAAGCTGCAAAATTTCCGACATCTTCTTCCTTATCTCCGCCGTGATGTCCACCGCCGACCGCCGTAGCAGACCGCACAAACTTTCAGAATAACACGTCAATCTGTCAGAGGCTGACTGGGCCGAAGAGTACCCTCAGGGTGAGACACTCCCACAGAATATTCAGACACATCACCTCTCCTCCACCGCGATTATGATGGAGTGGGAAAAGCCTGAGCAGCAAAATCCTTACCACCACCACCACAACCCTCCTCTTTGTGACGATCATCTCCATCACCTCACTGGAACAACGGCCGCCGGGGCTCTCTACGTCAAAGTCATGACCGACGACCAATTGGAGACTCTTCGCAAACAAATTGCTGTTTACGCCACCATTTGCGAGCAGCTTGTTGAGATGCACAAGACCCTTACTGCTCACCAGGATCTCACAGGAATGAGGTTGGGTAATATGTACTGTGAACCATTGATGACATCTTCCAGCCACAAAATCACTTCTAGACAGAGGTGGACTCCGACACCTGTGCAGCTTCAGATCTTAGAGCGTATATTCGACCAAGGGAATGGGACTCCCAGCAAGCAAAAGATCAAAGAGATAACCGCTGAACTGGGGCAGCATGGCCAAATTTCTGAATCTAATGTCTATAACTGGTTCCAAAACAGGCGTGCTCGATCGAAGAGAAAGCAGCAAAGTGCCCCACCTGCCTATGGCGAATCAGAAGTGGAGACAGAAGTTGAATCACCAAAAGATAAGAAGACGAAACCTGTGGATTTTCAAACTAATCAATCCTCTGCACCTTTAGGGGACGACATGTGCTTTCAGAGTCCGGAGATGAGTTCTGAACTGCATTTCCTGGATCCAAACACCAACAAAGCTGATACTTTGTTTCCTTCAAATGGAAGTTTAAAAACGGCAAGAAGCTTCGGCCAGATGTCTTTTTATGAGGCTGGGAATGAGCAGCTGACAGGAAAGATTGAAACGCCAGAGAACTATAGTATCTACCAGCAAGCAGAAGGCTACAACATGACGGGACGACCATGAATTCTTACACAATTAACACGAGGTGTAGTTGTGATATTACGAATGTGCTGGACTTCTGGCTCTCGTGTGAATGCACTTAGTCTAACATTGAAGGAGACGGTGATGACGATGACGAATGATGCTGACTTGTGTGCTCGTATCTTGTCGTGGATTGTCGGAGTATACAGTTTTGAGTGATGTATTTTGGTTGGATTGTGTTTGGAAGCATTGGGAGTTTTGATTGGTTGATTTGATTGAGCAATTCAGAGTCTTGTGAGTTAGTTAAACGTGACCCCTTAAGAGGAGAGAATGTATGGTATCCATTTGTAAGTGTTTGTATTAAAAAGATGATTGCTTAAATGATCCTAATTGATAGTAGAATGGGCACACCCTCGTTCTCTCTAGTATTAACCGTTAAAAAAGAAAAAGTTAAGCATAGGCATTTTAACTTACTTAGTCGACCAGTTAAACAAACTAATTTAGCTAATGCCAATAATGATTAAATTTAAGAGGGTTAAATAAACTATTTAATCATCCTTTATTGGCTTTAACTATTTCACAACTACTACTAGTAGGTAGGATTATTTGGTACAGCTGTTAATATATTTAGTTCAAAGGCCATGAATATTGTTATATATTTGATCTTATTTTTAACTTTTTCCTTCTTACTTAATTTGATTGAAAC ATGATGGAGTGGGAAAAGCCTGAGCAGCAAAATCCTTACCACCACCACCACAACCCTCCTCTTTGTGACGATCATCTCCATCACCTCACTGGAACAACGGCCGCCGGGGCTCTCTACGTCAAAGTCATGACCGACGACCAATTGGAGACTCTTCGCAAACAAATTGCTGTTTACGCCACCATTTGCGAGCAGCTTGTTGAGATGCACAAGACCCTTACTGCTCACCAGGATCTCACAGGAATGAGGTTGGGTAATATGTACTGTGAACCATTGATGACATCTTCCAGCCACAAAATCACTTCTAGACAGAGGTGGACTCCGACACCTGTGCAGCTTCAGATCTTAGAGCGTATATTCGACCAAGGGAATGGGACTCCCAGCAAGCAAAAGATCAAAGAGATAACCGCTGAACTGGGGCAGCATGGCCAAATTTCTGAATCTAATGTCTATAACTGGTTCCAAAACAGGCGTGCTCGATCGAAGAGAAAGCAGCAAAGTGCCCCACCTGCCTATGGCGAATCAGAAGTGGAGACAGAAGTTGAATCACCAAAAGATAAGAAGACGAAACCTGTGGATTTTCAAACTAATCAATCCTCTGCACCTTTAGGGGACGACATGTGCTTTCAGAGTCCGGAGATGAGTTCTGAACTGCATTTCCTGGATCCAAACACCAACAAAGCTGATACTTTGTTTCCTTCAAATGGAAGTTTAAAAACGGCAAGAAGCTTCGGCCAGATGTCTTTTTATGAGGCTGGGAATGAGCAGCTGACAGGAAAGATTGAAACGCCAGAGAACTATAGTATCTACCAGCAAGCAGAAGGCTACAACATGACGGGACGACCATGA MMEWEKPEQQNPYHHHHNPPLCDDHLHHLTGTTAAGALYVKVMTDDQLETLRKQIAVYATICEQLVEMHKTLTAHQDLTGMRLGNMYCEPLMTSSSHKITSRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITAELGQHGQISESNVYNWFQNRRARSKRKQQSAPPAYGESEVETEVESPKDKKTKPVDFQTNQSSAPLGDDMCFQSPEMSSELHFLDPNTNKADTLFPSNGSLKTARSFGQMSFYEAGNEQLTGKIETPENYSIYQQAEGYNMTGRP Homology
BLAST of Pay0019985.1 vs. ExPASy Swiss-Prot
Match: O81788 (WUSCHEL-related homeobox 13 OS=Arabidopsis thaliana OX=3702 GN=WOX13 PE=2 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 5.1e-71 Identity = 154/298 (51.68%), Postives = 190/298 (63.76%), Query Frame = 0
BLAST of Pay0019985.1 vs. ExPASy Swiss-Prot
Match: Q5QMM3 (WUSCHEL-related homeobox 8 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX8 PE=2 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 5.8e-67 Identity = 146/286 (51.05%), Postives = 184/286 (64.34%), Query Frame = 0
BLAST of Pay0019985.1 vs. ExPASy Swiss-Prot
Match: Q9LM84 (WUSCHEL-related homeobox 14 OS=Arabidopsis thaliana OX=3702 GN=WOX14 PE=1 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 7.5e-38 Identity = 80/143 (55.94%), Postives = 113/143 (79.02%), Query Frame = 0
BLAST of Pay0019985.1 vs. ExPASy Swiss-Prot
Match: Q9LM83 (Putative WUSCHEL-related homeobox 10 OS=Arabidopsis thaliana OX=3702 GN=WOX10 PE=3 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.7e-34 Identity = 75/127 (59.06%), Postives = 101/127 (79.53%), Query Frame = 0
BLAST of Pay0019985.1 vs. ExPASy Swiss-Prot
Match: Q6X7K0 (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2) HSP 1 Score: 70.1 bits (170), Expect = 4.6e-11 Identity = 51/160 (31.87%), Postives = 80/160 (50.00%), Query Frame = 0
BLAST of Pay0019985.1 vs. ExPASy TrEMBL
Match: A0A5A7UHA8 (WUSCHEL-related homeobox 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00270 PE=4 SV=1) HSP 1 Score: 567.8 bits (1462), Expect = 2.6e-158 Identity = 281/285 (98.60%), Postives = 281/285 (98.60%), Query Frame = 0
BLAST of Pay0019985.1 vs. ExPASy TrEMBL
Match: A0A1S3BJS3 (WUSCHEL-related homeobox 13 OS=Cucumis melo OX=3656 GN=LOC103490652 PE=4 SV=1) HSP 1 Score: 567.8 bits (1462), Expect = 2.6e-158 Identity = 281/285 (98.60%), Postives = 281/285 (98.60%), Query Frame = 0
BLAST of Pay0019985.1 vs. ExPASy TrEMBL
Match: A0A0A0L4U3 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002330 PE=4 SV=1) HSP 1 Score: 562.4 bits (1448), Expect = 1.1e-156 Identity = 278/282 (98.58%), Postives = 279/282 (98.94%), Query Frame = 0
BLAST of Pay0019985.1 vs. ExPASy TrEMBL
Match: A0A6J1E6T1 (WUSCHEL-related homeobox 13-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431127 PE=4 SV=1) HSP 1 Score: 515.0 bits (1325), Expect = 2.0e-142 Identity = 260/281 (92.53%), Postives = 269/281 (95.73%), Query Frame = 0
BLAST of Pay0019985.1 vs. ExPASy TrEMBL
Match: A0A6J1L5H6 (WUSCHEL-related homeobox 13-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111500199 PE=4 SV=1) HSP 1 Score: 512.3 bits (1318), Expect = 1.3e-141 Identity = 260/281 (92.53%), Postives = 268/281 (95.37%), Query Frame = 0
BLAST of Pay0019985.1 vs. NCBI nr
Match: XP_008448483.1 (PREDICTED: WUSCHEL-related homeobox 13 [Cucumis melo] >KAA0052921.1 WUSCHEL-related homeobox 13 [Cucumis melo var. makuwa] >TYK11375.1 WUSCHEL-related homeobox 13 [Cucumis melo var. makuwa]) HSP 1 Score: 567.8 bits (1462), Expect = 5.3e-158 Identity = 281/285 (98.60%), Postives = 281/285 (98.60%), Query Frame = 0
BLAST of Pay0019985.1 vs. NCBI nr
Match: XP_004146172.1 (WUSCHEL-related homeobox 13 [Cucumis sativus] >XP_031739458.1 WUSCHEL-related homeobox 13 [Cucumis sativus] >XP_031739459.1 WUSCHEL-related homeobox 13 [Cucumis sativus]) HSP 1 Score: 562.4 bits (1448), Expect = 2.2e-156 Identity = 278/282 (98.58%), Postives = 279/282 (98.94%), Query Frame = 0
BLAST of Pay0019985.1 vs. NCBI nr
Match: XP_038904713.1 (WUSCHEL-related homeobox 13 isoform X1 [Benincasa hispida] >XP_038904714.1 WUSCHEL-related homeobox 13 isoform X1 [Benincasa hispida]) HSP 1 Score: 527.7 bits (1358), Expect = 6.1e-146 Identity = 265/281 (94.31%), Postives = 271/281 (96.44%), Query Frame = 0
BLAST of Pay0019985.1 vs. NCBI nr
Match: XP_038904716.1 (WUSCHEL-related homeobox 13 isoform X2 [Benincasa hispida]) HSP 1 Score: 521.5 bits (1342), Expect = 4.4e-144 Identity = 264/281 (93.95%), Postives = 270/281 (96.09%), Query Frame = 0
BLAST of Pay0019985.1 vs. NCBI nr
Match: KAG7015849.1 (WUSCHEL-related homeobox 13, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 516.5 bits (1329), Expect = 1.4e-142 Identity = 261/281 (92.88%), Postives = 269/281 (95.73%), Query Frame = 0
BLAST of Pay0019985.1 vs. TAIR 10
Match: AT4G35550.1 (WUSCHEL related homeobox 13 ) HSP 1 Score: 269.2 bits (687), Expect = 3.6e-72 Identity = 154/298 (51.68%), Postives = 190/298 (63.76%), Query Frame = 0
BLAST of Pay0019985.1 vs. TAIR 10
Match: AT1G20700.1 (WUSCHEL related homeobox 14 ) HSP 1 Score: 159.1 bits (401), Expect = 5.3e-39 Identity = 80/143 (55.94%), Postives = 113/143 (79.02%), Query Frame = 0
BLAST of Pay0019985.1 vs. TAIR 10
Match: AT1G20710.1 (WUSCHEL related homeobox 10 ) HSP 1 Score: 147.9 bits (372), Expect = 1.2e-35 Identity = 75/127 (59.06%), Postives = 101/127 (79.53%), Query Frame = 0
BLAST of Pay0019985.1 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 ) HSP 1 Score: 70.1 bits (170), Expect = 3.2e-12 Identity = 51/160 (31.87%), Postives = 80/160 (50.00%), Query Frame = 0
BLAST of Pay0019985.1 vs. TAIR 10
Match: AT2G33880.1 (homeobox-3 ) HSP 1 Score: 68.9 bits (167), Expect = 7.2e-12 Identity = 41/128 (32.03%), Postives = 64/128 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|