Pay0016141.1 (mRNA) Melon (Payzawat) v1

Overview


Name	Pay0016141.1
Type	mRNA
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Poly(A)-specific ribonuclease
Location	chr11: 2531580 .. 2532599 (+)
Sequence length	1020
RNA-Seq Expression	Pay0016141.1
Synteny	Pay0016141.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTAATTACTTTCTATAAATTAACACTTCATACGTACAACTCTCATACCTTTCTAAACACCAACATTTAAATTCAAACAATCCCAGCTATTTCAATTTACCAACAACATCAGCAAATGGGTGGAAGAAATCAAACTCGATCAAGAAGATCAAAAAAGCCTTTCATTCGGCAAGTTTGGGCTTCCAACTTCAATTCAGAAATAACAAAATTTGATGAATGTCTTCGATTTCACACAATTCTTACCATCGATACTGAATTCCCTGGCTTTATCATACAATCTCCACGGGATTCCATTGATGAAGAGATTTACAAAAATTTTCGTTTCAACGTAAACCAAATGAAACTCATTCAACTTGGTATCACTGCTTCAAATGATTTTGGTCAAATTGGCGGTTCATGGGAGTTTAATTTTTCTGATTTCGACTTCCAAGTTGATGCTCATTCTCCTTCTGCCATTCCATTTTTAGAAAAGAATGGTTTGGATTTTAAAAAACTGAAGAAATATGGAATACCCATTGCTTCATTCACTAAAAAATTCTTACCTATCATTCAAAAACGTGACATCTTTCGATGGGTCACTTTCCATGGCTTGTATGACATAGGGTATCTCATCAAAGCAATGGGGTTAATCACAGTGTTGCCAAAATCAATGGAAGAATTTGCAACGTTGGTTGTTAACGAAGTTGGAATTGTAAGAGATTTGAAGCATATGGCTAGATTCTGTGAAGGACTAGAAGATGGAAGACTTGGACTTGAAAGATTAGGAAAAATATTGAATAAAAAACGATTCGGAATGAAACATAACGCTGGATCAGATAGCTTGCTTACAGCATCTGCACATTTTGAGATGGTGAAAAGATTCAGAATGACTTATGAAGTTTGTAATGGATTTTTGTATGGTTTTTCAGAATCGCTTGAATCCATGAAGATGAAGATGAAGATTTATCATCACAACATTCTTAGGTTAGGTCAAATTCCACATTTTCCTTATACACCTTCTTGTATTATTTCCCATTAA

mRNA sequence

CTTCTAATTACTTTCTATAAATTAACACTTCATACGTACAACTCTCATACCTTTCTAAACACCAACATTTAAATTCAAACAATCCCAGCTATTTCAATTTACCAACAACATCAGCAAATGGGTGGAAGAAATCAAACTCGATCAAGAAGATCAAAAAAGCCTTTCATTCGGCAAGTTTGGGCTTCCAACTTCAATTCAGAAATAACAAAATTTGATGAATGTCTTCGATTTCACACAATTCTTACCATCGATACTGAATTCCCTGGCTTTATCATACAATCTCCACGGGATTCCATTGATGAAGAGATTTACAAAAATTTTCGTTTCAACGTAAACCAAATGAAACTCATTCAACTTGGTATCACTGCTTCAAATGATTTTGGTCAAATTGGCGGTTCATGGGAGTTTAATTTTTCTGATTTCGACTTCCAAGTTGATGCTCATTCTCCTTCTGCCATTCCATTTTTAGAAAAGAATGGTTTGGATTTTAAAAAACTGAAGAAATATGGAATACCCATTGCTTCATTCACTAAAAAATTCTTACCTATCATTCAAAAACGTGACATCTTTCGATGGGTCACTTTCCATGGCTTGTATGACATAGGGTATCTCATCAAAGCAATGGGGTTAATCACAGTGTTGCCAAAATCAATGGAAGAATTTGCAACGTTGGTTGTTAACGAAGTTGGAATTGTAAGAGATTTGAAGCATATGGCTAGATTCTGTGAAGGACTAGAAGATGGAAGACTTGGACTTGAAAGATTAGGAAAAATATTGAATAAAAAACGATTCGGAATGAAACATAACGCTGGATCAGATAGCTTGCTTACAGCATCTGCACATTTTGAGATGGTGAAAAGATTCAGAATGACTTATGAAGTTTGTAATGGATTTTTGTATGGTTTTTCAGAATCGCTTGAATCCATGAAGATGAAGATGAAGATTTATCATCACAACATTCTTAGGTTAGGTCAAATTCCACATTTTCCTTATACACCTTCTTGTATTATTTCCCATTAA

Coding sequence (CDS)

ATGGGTGGAAGAAATCAAACTCGATCAAGAAGATCAAAAAAGCCTTTCATTCGGCAAGTTTGGGCTTCCAACTTCAATTCAGAAATAACAAAATTTGATGAATGTCTTCGATTTCACACAATTCTTACCATCGATACTGAATTCCCTGGCTTTATCATACAATCTCCACGGGATTCCATTGATGAAGAGATTTACAAAAATTTTCGTTTCAACGTAAACCAAATGAAACTCATTCAACTTGGTATCACTGCTTCAAATGATTTTGGTCAAATTGGCGGTTCATGGGAGTTTAATTTTTCTGATTTCGACTTCCAAGTTGATGCTCATTCTCCTTCTGCCATTCCATTTTTAGAAAAGAATGGTTTGGATTTTAAAAAACTGAAGAAATATGGAATACCCATTGCTTCATTCACTAAAAAATTCTTACCTATCATTCAAAAACGTGACATCTTTCGATGGGTCACTTTCCATGGCTTGTATGACATAGGGTATCTCATCAAAGCAATGGGGTTAATCACAGTGTTGCCAAAATCAATGGAAGAATTTGCAACGTTGGTTGTTAACGAAGTTGGAATTGTAAGAGATTTGAAGCATATGGCTAGATTCTGTGAAGGACTAGAAGATGGAAGACTTGGACTTGAAAGATTAGGAAAAATATTGAATAAAAAACGATTCGGAATGAAACATAACGCTGGATCAGATAGCTTGCTTACAGCATCTGCACATTTTGAGATGGTGAAAAGATTCAGAATGACTTATGAAGTTTGTAATGGATTTTTGTATGGTTTTTCAGAATCGCTTGAATCCATGAAGATGAAGATGAAGATTTATCATCACAACATTCTTAGGTTAGGTCAAATTCCACATTTTCCTTATACACCTTCTTGTATTATTTCCCATTAA

Protein sequence

MGGRNQTRSRRSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSESLESMKMKMKIYHHNILRLGQIPHFPYTPSCIISH

Homology

[Close]

BLAST of Pay0016141.1 vs. ExPASy Swiss-Prot
Match: Q9SHJ0 (Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=CAF1-1 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.8e-42
Identity = 98/255 (38.43%), Postives = 141/255 (55.29%), Query Frame = 0


Query: 14  KPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVN 73
           +P  R+VW SN + E+ +  ECL+   ++  DTE+PG I ++  DS  +E Y+  + NV 
Sbjct: 6   QPLARRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFRTYFDSSSDECYRAMKGNVE 65

Query: 74  QMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIP 133
             KLIQ G T  N  G+IGG WE NFS+F    D  +  +I FL ++GLD +K++  G+ 
Sbjct: 66  NTKLIQCGFTLFNAKGEIGGVWEINFSNFGDPSDTRNELSIEFLRRHGLDLQKIRDEGVD 125

Query: 134 I--ASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVG 193
           +    F  K + + + +    +VTF G YD  Y +  +     LP++  EFAT VV   G
Sbjct: 126 MFGYGFFPKLMTVFRSQKHVEFVTFQGAYDFAYFLSILN-HGKLPETHGEFATEVVKVFG 185

Query: 194 IVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRM 253
            V D K MA FCEGL +  LGL +L ++L   R G  H+AGSDSL+TA   F  +K    
Sbjct: 186 QVYDTKVMAGFCEGLGE-HLGLSKLAQLLQITRVGRAHHAGSDSLMTALV-FIKLKHVYE 245

Query: 254 TYEVCNGFLYGFSES 267
                 G +YG  +S
Sbjct: 246 DSRFARGLIYGIGKS 257

[Close]

BLAST of Pay0016141.1 vs. ExPASy Swiss-Prot
Match: Q9LXM4 (Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana OX=3702 GN=CAF1-8 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.9e-39
Identity = 93/218 (42.66%), Postives = 131/218 (60.09%), Query Frame = 0


Query: 33  DECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIG 92
           ++CLR +  + IDTEFP  + ++ + + DEE Y +  F+V++ KLIQLG+T  +  G+IG
Sbjct: 5   EDCLRSYRFIAIDTEFPSTLRETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDINGRIG 64

Query: 93  GSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQK-RDIF 152
           G+WE NFSDF    DA +  +I FL +NGLD +K+++ GI I  F  +   +++K R   
Sbjct: 65  GTWEINFSDFGVD-DARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKTRRNI 124

Query: 153 RWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMARFCEGLEDGRL 212
            WVTFHG YDI YL+K       LP + E F+  V   +G V DLK MA  CEGL   RL
Sbjct: 125 TWVTFHGSYDIAYLLKGF-TGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEGL-SSRL 184

Query: 213 GLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRF 250
           GLE L       R G  H+AGS++ LTA    +++  F
Sbjct: 185 GLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKVLSPF 219

[Close]

BLAST of Pay0016141.1 vs. ExPASy Swiss-Prot
Match: O64773 (Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=CAF1-5 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 8.0e-38
Identity = 92/231 (39.83%), Postives = 134/231 (58.01%), Query Frame = 0


Query: 19  QVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLI 78
           +VW  N  +E+    +CL+    + IDTEFPG + ++P D+ DE  Y++ +FNV+   LI
Sbjct: 4   EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPGCLKETPMDASDEIRYRDMKFNVDNTHLI 63

Query: 79  QLGITASNDFGQ-IGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASF 138
           QLG+T    FG+ I  +WE N SDF+      +  +I FL+ NGLD  K+++ GI I  F
Sbjct: 64  QLGLTL---FGKGITKTWEINLSDFNESKSLKNDKSIAFLKNNGLDLDKIREEGIGIEEF 123

Query: 139 TKKFLPII-QKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVG-IVRD 198
             +F  I+ +K    RWVTF G YD  YL+K +     LP++ +EF   V   +G  V D
Sbjct: 124 FMEFSQILNEKHGKMRWVTFQGSYDKAYLLKGL-TRKPLPETSKEFDETVQQLLGRFVYD 183

Query: 199 LKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMV 247
           +K MA  C GL   R GL+R+  +L  +R G  H+AGSDS LTA    +++
Sbjct: 184 VKKMAGLCSGL-SSRFGLQRIADVLQMRRVGKAHHAGSDSELTARVFTKLI 229

[Close]

BLAST of Pay0016141.1 vs. ExPASy Swiss-Prot
Match: Q9SKZ2 (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 142.1 bits (357), Expect = 1.0e-32
Identity = 86/258 (33.33%), Postives = 138/258 (53.49%), Query Frame = 0


Query: 17  IRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQ--SPRDSIDEEIYKNFRFNVNQ 76
           IR+VW  N  SE+    E +     + +DTEFPG + +      +  E  Y+  + NVN 
Sbjct: 12  IREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEYHYETLKTNVNI 71

Query: 77  MKLIQLGITASNDFGQIGGS--------WEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKK 136
           +K+IQLG+T S++ G +           W+FNF +FD + D ++  +I  L ++G+DF K
Sbjct: 72  LKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQSGIDFVK 131

Query: 137 LKKYGIPIASFTKKFLPI-IQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATL 196
             ++GI    F +  +   I   +   WVTFH  YD GYL+K +     LP++   F  +
Sbjct: 132 NNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLL-TCQNLPETQTGFFEM 191

Query: 197 VVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEM 256
           +      V D+KH+ +FC  L     GL +L ++L+ +R G+ H AGSDSLLT+    ++
Sbjct: 192 ISVYFPRVYDIKHLMKFCNSLHG---GLNKLAELLDVERVGICHQAGSDSLLTSCTFRKL 251

Query: 257 VKRFRM-TYEVCNGFLYG 263
            + F + + E  +G LYG
Sbjct: 252 QENFFIGSMEKYSGVLYG 265

[Close]

BLAST of Pay0016141.1 vs. ExPASy Swiss-Prot
Match: Q9LXM2 (Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana OX=3702 GN=CAF1-9 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 5.0e-32
Identity = 92/255 (36.08%), Postives = 138/255 (54.12%), Query Frame = 0


Query: 18  RQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSP-RDSIDEEIYKNFRFNVNQMK 77
           R+VWA N  SE     E +  +  +++DTEFPG I +S  R +  +++Y   + NV+ + 
Sbjct: 20  REVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRFTNPDDLYTLLKANVDALS 79

Query: 78  LIQLGITASNDFGQI---------GGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKL 137
           LIQ+G+T S+  G +         G  WEFNF DFD   DAH+P +I  L + G+DF++ 
Sbjct: 80  LIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLRRQGIDFERN 139

Query: 138 KKYGIPIASFTKKFLP--IIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATL 197
            + G+    F +  +   ++   ++  WVTFH  YD GYL+K +     LP ++ EF  +
Sbjct: 140 CRDGVESERFAELMMSSGLVCNEEV-SWVTFHSAYDFGYLMKIL-TRRELPGALGEFKRV 199

Query: 198 VVNEVG-IVRDLKHMARFCEGLEDGRLGLERLGKILNKKR-FGMKHNAGSDSLLTASAHF 257
           +    G  V D+KHM +FCE    G  GL+R+ + L   R  G  H AGSDSLLT    +
Sbjct: 200 MRVLFGERVYDVKHMMKFCERRLFG--GLDRVARTLEVNRAVGKCHQAGSDSLLT----W 259

Query: 258 EMVKRFRMTYEVCNG 259
              +R R  Y V +G
Sbjct: 260 HAFQRMRDLYFVQDG 266

[Close]

BLAST of Pay0016141.1 vs. ExPASy TrEMBL
Match: A0A5A7TRG1 (Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001200 PE=3 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 8.5e-168
Identity = 294/300 (98.00%), Postives = 296/300 (98.67%), Query Frame = 0


Query: 1   MGGRNQTRSRRSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSI 60
           MGGRNQTRSRRSKKPFIRQVWASNFNSEIT+FDECLRFHTILTIDTEFPGFIIQSPRDSI
Sbjct: 1   MGGRNQTRSRRSKKPFIRQVWASNFNSEITQFDECLRFHTILTIDTEFPGFIIQSPRDSI 60

Query: 61  DEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKN 120
           DEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVD+HSPSAIPFLEKN
Sbjct: 61  DEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDSHSPSAIPFLEKN 120

Query: 121 GLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSME 180
           GLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSME
Sbjct: 121 GLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSME 180

Query: 181 EFATLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTAS 240
           EFATLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTAS
Sbjct: 181 EFATLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTAS 240

Query: 241 AHFEMVKRFRMTYEVCNGFLYGFSESLESMKMKMKIYHHNILRLGQIPHFPYTPSCIISH 300
           AHFEMVKRF MTYEVCNGFLYGFSESLES  MKM IYHHNILRLGQIPHFPYTPSCIISH
Sbjct: 241 AHFEMVKRFGMTYEVCNGFLYGFSESLES--MKMIIYHHNILRLGQIPHFPYTPSCIISH 298

[Close]

BLAST of Pay0016141.1 vs. ExPASy TrEMBL
Match: A0A0A0LPP0 (Poly(A)-specific ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_2G270190 PE=3 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 3.3e-135
Identity = 245/286 (85.66%), Postives = 263/286 (91.96%), Query Frame = 0


Query: 1   MGGRNQTRSRRSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSI 60
           MGGRNQTRS R +KP IRQVWASNF+SEI +FDECLRFHTILTIDTEFPGFI QSPR SI
Sbjct: 1   MGGRNQTRSTR-EKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSI 60

Query: 61  DEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKN 120
           D+E+YK+F FNVNQ KLIQLGITAS+D GQIGGSWEFNFSDFDF+ DAHSP AIPFLE N
Sbjct: 61  DDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHN 120

Query: 121 GLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSME 180
           GLD KK+KK GIPIASFTKKFLPI++KRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSME
Sbjct: 121 GLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSME 180

Query: 181 EFATLVVNEVGIVRDLKHMARFCEGLED-GRLGLERLGKILNKKRFGMKHNAGSDSLLTA 240
           EFAT+VVNEVGIVRDLKHMA+FCEGL+D GRLGLERLGK+LN KRFGMKHNAGSDSLLTA
Sbjct: 181 EFATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTA 240

Query: 241 SAHFEMVKRFRMTYEVCNGFLYGFSESLES--MKMKMKIYHHNILR 284
           SAH EMV+RF M  +VCNGFLYGFSE+LES  MKMKMKI HHNILR
Sbjct: 241 SAHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILR 285

[Close]

BLAST of Pay0016141.1 vs. ExPASy TrEMBL
Match: A0A5A7TRF3 (Putative CCR4-associated factor 1-like protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001300 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 5.1e-120
Identity = 218/228 (95.61%), Postives = 221/228 (96.93%), Query Frame = 0


Query: 75  MKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPI 134
           MKLIQLGITASND GQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKK GIPI
Sbjct: 1   MKLIQLGITASNDLGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGIPI 60

Query: 135 ASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVR 194
           ASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLIT+LP+SMEEFA LVVNEVGIVR
Sbjct: 61  ASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVR 120

Query: 195 DLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYE 254
           DLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMT E
Sbjct: 121 DLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSE 180

Query: 255 VCNGFLYGFSESLESMKMKM--KIYHHNILRLGQIPHFPYTPSCIISH 301
           VCNGFLYGFS+SLESMKMKM  KIY HNILRLGQIPHFPYTPSCIISH
Sbjct: 181 VCNGFLYGFSKSLESMKMKMKIKIYLHNILRLGQIPHFPYTPSCIISH 228

[Close]

BLAST of Pay0016141.1 vs. ExPASy TrEMBL
Match: A0A6J1G7L2 (Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111451625 PE=3 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 2.7e-89
Identity = 164/270 (60.74%), Postives = 209/270 (77.41%), Query Frame = 0


Query: 1   MGGRNQTRSRRSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSI 60
           MG RN+ R RR + P I++VWASNF+ EI + + CL+ + IL+IDTEFPG I  +P  SI
Sbjct: 1   MGRRNRERPRR-RTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSI 60

Query: 61  DEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKN 120
           DE +Y++ RFNVNQ KLIQLG+TAS++ GQ+ GSWEFNFSDFD Q+D  +PS+I FLE+N
Sbjct: 61  DERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSIAFLEQN 120

Query: 121 GLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSME 180
           GLDF KLKK GIP++ FT  F  II++  + +WVTFHGLYDIGYL+KAMG+   LP+SME
Sbjct: 121 GLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESME 180

Query: 181 EFATLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTAS 240
           EFA +V   VG+VRDLK +AR+CEGLE GR+GLERLG++L +KRFGMKH+AGSDSLLTA 
Sbjct: 181 EFAEMVARGVGVVRDLKEVARWCEGLEQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAF 240

Query: 241 AHFEMVKRFRMTYEVCNGFLYGFSESLESM 271
            H +M + FR+  E  +G LYG    L+ M
Sbjct: 241 VHAKMARWFRLESEAYDGHLYGLRNKLQYM 269

[Close]

BLAST of Pay0016141.1 vs. ExPASy TrEMBL
Match: A0A6J1CXP9 (Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111015407 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 8.7e-88
Identity = 164/289 (56.75%), Postives = 216/289 (74.74%), Query Frame = 0


Query: 1   MGGRNQTRSRRSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSI 60
           MG   +  SRR     IR+VW+ NF+ E+   ++CL  + ILTIDTEFPGFI  +P  +I
Sbjct: 1   MGRGKRGHSRRGNAQ-IREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAI 60

Query: 61  DEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKN 120
           +E++Y +FRFNVN+ KLIQLG+TAS++ G IG +WEFNFSDFD Q+D H+ S++ FL++N
Sbjct: 61  EEKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLKQN 120

Query: 121 GLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSME 180
           GLDF KLK++GIPI  FT K   + +K  I RWVTFHGLYDIGYL+KAMG+   +P+SME
Sbjct: 121 GLDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESME 180

Query: 181 EFATLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTAS 240
           EFA LV   +G V DLKHMA+FCEGLEDG+LGLE+L +++N+KRFG KH+AGSDSLLTAS
Sbjct: 181 EFAELVERALGNVSDLKHMAQFCEGLEDGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTAS 240

Query: 241 AHFEMVKRFRMTYEVCNGFLYGFSESLESMKMKMKIYHHNILRLGQIPH 290
            + +M  +F +  EVC+GFLYG    L +   K+K+Y +  L  GQIP+
Sbjct: 241 LYAKMKNQFELGSEVCDGFLYGLRIKLHA---KIKLYQN--LMFGQIPY 283

[Close]

BLAST of Pay0016141.1 vs. NCBI nr
Match: KAA0045730.1 (putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa] >TYJ99550.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa])

HSP 1 Score: 599.4 bits (1544), Expect = 1.8e-167
Identity = 294/300 (98.00%), Postives = 296/300 (98.67%), Query Frame = 0


Query: 1   MGGRNQTRSRRSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSI 60
           MGGRNQTRSRRSKKPFIRQVWASNFNSEIT+FDECLRFHTILTIDTEFPGFIIQSPRDSI
Sbjct: 1   MGGRNQTRSRRSKKPFIRQVWASNFNSEITQFDECLRFHTILTIDTEFPGFIIQSPRDSI 60

Query: 61  DEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKN 120
           DEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVD+HSPSAIPFLEKN
Sbjct: 61  DEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDSHSPSAIPFLEKN 120

Query: 121 GLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSME 180
           GLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSME
Sbjct: 121 GLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSME 180

Query: 181 EFATLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTAS 240
           EFATLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTAS
Sbjct: 181 EFATLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTAS 240

Query: 241 AHFEMVKRFRMTYEVCNGFLYGFSESLESMKMKMKIYHHNILRLGQIPHFPYTPSCIISH 300
           AHFEMVKRF MTYEVCNGFLYGFSESLES  MKM IYHHNILRLGQIPHFPYTPSCIISH
Sbjct: 241 AHFEMVKRFGMTYEVCNGFLYGFSESLES--MKMIIYHHNILRLGQIPHFPYTPSCIISH 298

[Close]

BLAST of Pay0016141.1 vs. NCBI nr
Match: XP_031736916.1 (putative CCR4-associated factor 1 homolog 8 [Cucumis sativus] >KGN61926.1 hypothetical protein Csa_006644 [Cucumis sativus])

HSP 1 Score: 491.1 bits (1263), Expect = 6.7e-135
Identity = 245/286 (85.66%), Postives = 263/286 (91.96%), Query Frame = 0


Query: 1   MGGRNQTRSRRSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSI 60
           MGGRNQTRS R +KP IRQVWASNF+SEI +FDECLRFHTILTIDTEFPGFI QSPR SI
Sbjct: 1   MGGRNQTRSTR-EKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSI 60

Query: 61  DEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKN 120
           D+E+YK+F FNVNQ KLIQLGITAS+D GQIGGSWEFNFSDFDF+ DAHSP AIPFLE N
Sbjct: 61  DDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHN 120

Query: 121 GLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSME 180
           GLD KK+KK GIPIASFTKKFLPI++KRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSME
Sbjct: 121 GLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSME 180

Query: 181 EFATLVVNEVGIVRDLKHMARFCEGLED-GRLGLERLGKILNKKRFGMKHNAGSDSLLTA 240
           EFAT+VVNEVGIVRDLKHMA+FCEGL+D GRLGLERLGK+LN KRFGMKHNAGSDSLLTA
Sbjct: 181 EFATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTA 240

Query: 241 SAHFEMVKRFRMTYEVCNGFLYGFSESLES--MKMKMKIYHHNILR 284
           SAH EMV+RF M  +VCNGFLYGFSE+LES  MKMKMKI HHNILR
Sbjct: 241 SAHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILR 285

[Close]

BLAST of Pay0016141.1 vs. NCBI nr
Match: KAA0045720.1 (putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa] >TYJ99560.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa])

HSP 1 Score: 440.7 bits (1132), Expect = 1.0e-119
Identity = 218/228 (95.61%), Postives = 221/228 (96.93%), Query Frame = 0


Query: 75  MKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPI 134
           MKLIQLGITASND GQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKK GIPI
Sbjct: 1   MKLIQLGITASNDLGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKDGIPI 60

Query: 135 ASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVR 194
           ASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLIT+LP+SMEEFA LVVNEVGIVR
Sbjct: 61  ASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITMLPESMEEFAMLVVNEVGIVR 120

Query: 195 DLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYE 254
           DLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMT E
Sbjct: 121 DLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTSE 180

Query: 255 VCNGFLYGFSESLESMKMKM--KIYHHNILRLGQIPHFPYTPSCIISH 301
           VCNGFLYGFS+SLESMKMKM  KIY HNILRLGQIPHFPYTPSCIISH
Sbjct: 181 VCNGFLYGFSKSLESMKMKMKIKIYLHNILRLGQIPHFPYTPSCIISH 228

[Close]

BLAST of Pay0016141.1 vs. NCBI nr
Match: XP_038895744.1 (putative CCR4-associated factor 1 homolog 8 [Benincasa hispida])

HSP 1 Score: 421.8 bits (1083), Expect = 5.0e-114
Identity = 199/291 (68.38%), Postives = 244/291 (83.85%), Query Frame = 0


Query: 11  RSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRF 70
           R +K  I +VWASNF++EI+K +ECL FHTI++IDTEFPGFI  SP  SIDE +Y++FRF
Sbjct: 5   RIRKSLIHKVWASNFDAEISKLEECLEFHTIVSIDTEFPGFIRNSPWGSIDETLYEDFRF 64

Query: 71  NVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKY 130
           NVNQ KLIQLG+TA +D G+IGGSWEFNFSDFD ++DA SPS+  FLE+NGLDF KLKKY
Sbjct: 65  NVNQTKLIQLGLTACDDSGKIGGSWEFNFSDFDPEIDAQSPSSASFLEQNGLDFNKLKKY 124

Query: 131 GIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEV 190
           GIPI  FT KF+ II+K ++FRWVTFHGLYDIGYLIKAMG+  VLP++MEEFAT+VV  +
Sbjct: 125 GIPINLFTAKFVHIIRKHNVFRWVTFHGLYDIGYLIKAMGITEVLPETMEEFATVVVRRL 184

Query: 191 GIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFR 250
           GIVRDLKHMARFCEGLEDG+LGLERLGK+L++KR+G+KHNAGSDSLLTASAHFEM++RF 
Sbjct: 185 GIVRDLKHMARFCEGLEDGKLGLERLGKLLDQKRYGLKHNAGSDSLLTASAHFEMIQRFD 244

Query: 251 MTYEVCNGFLYGFSESLESMKMKMKIYHHNILRLGQIPH----FPYTPSCI 298
           M  E+C+G+LYGFS  L+SM + M ++H  I+  GQIP+    + Y PS I
Sbjct: 245 MDAEICDGYLYGFSNKLQSMDINMNMFHRKIITFGQIPYAIPLYCYVPSYI 295

[Close]

BLAST of Pay0016141.1 vs. NCBI nr
Match: KAG6604931.1 (putative CCR4-associated factor 1-like 8, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027010.1 putative CCR4-associated factor 1-like 8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 340.5 bits (872), Expect = 1.5e-89
Identity = 166/276 (60.14%), Postives = 211/276 (76.45%), Query Frame = 0


Query: 1   MGGRNQTRSRRSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSI 60
           MG RN+ R RR + P I++VWASNF+ EI + + CL+ + IL+IDTEFPG I  +P  SI
Sbjct: 1   MGRRNRARPRR-RTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSI 60

Query: 61  DEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKN 120
           DE +Y++ RFNVNQ KLIQLG+TAS++ GQ+ GSWEFNFSDFD Q+D  +PS+I FLE+N
Sbjct: 61  DERVYEDLRFNVNQTKLIQLGLTASDESGQVVGSWEFNFSDFDHQIDTQNPSSISFLEQN 120

Query: 121 GLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSME 180
           GLDF KLKK GIP++ FT  F  II++  + +WVTFHGLYDIGYL+KAMG+   LP+SME
Sbjct: 121 GLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESME 180

Query: 181 EFATLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTAS 240
           EFA +V   VG+VRDLK +AR+CEGLE GR+GLERLG++L +KRFGMKH+AGSDSLLTA 
Sbjct: 181 EFAEMVARGVGVVRDLKEVARWCEGLEQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAF 240

Query: 241 AHFEMVKRFRMTYEVCNGFLYGFSESLESMKMKMKI 277
            H +M + FR+     +G LYG    LE MK+   I
Sbjct: 241 VHAKMARWFRLESGAYDGHLYGLQNKLEHMKVNQTI 275

[Close]

BLAST of Pay0016141.1 vs. TAIR 10
Match: AT1G06450.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 174.5 bits (441), Expect = 1.3e-43
Identity = 98/255 (38.43%), Postives = 141/255 (55.29%), Query Frame = 0


Query: 14  KPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVN 73
           +P  R+VW SN + E+ +  ECL+   ++  DTE+PG I ++  DS  +E Y+  + NV 
Sbjct: 6   QPLARRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFRTYFDSSSDECYRAMKGNVE 65

Query: 74  QMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIP 133
             KLIQ G T  N  G+IGG WE NFS+F    D  +  +I FL ++GLD +K++  G+ 
Sbjct: 66  NTKLIQCGFTLFNAKGEIGGVWEINFSNFGDPSDTRNELSIEFLRRHGLDLQKIRDEGVD 125

Query: 134 I--ASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVG 193
           +    F  K + + + +    +VTF G YD  Y +  +     LP++  EFAT VV   G
Sbjct: 126 MFGYGFFPKLMTVFRSQKHVEFVTFQGAYDFAYFLSILN-HGKLPETHGEFATEVVKVFG 185

Query: 194 IVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRM 253
            V D K MA FCEGL +  LGL +L ++L   R G  H+AGSDSL+TA   F  +K    
Sbjct: 186 QVYDTKVMAGFCEGLGE-HLGLSKLAQLLQITRVGRAHHAGSDSLMTALV-FIKLKHVYE 245

Query: 254 TYEVCNGFLYGFSES 267
                 G +YG  +S
Sbjct: 246 DSRFARGLIYGIGKS 257

[Close]

BLAST of Pay0016141.1 vs. TAIR 10
Match: AT3G44240.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 164.5 bits (415), Expect = 1.3e-40
Identity = 93/218 (42.66%), Postives = 131/218 (60.09%), Query Frame = 0


Query: 33  DECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIG 92
           ++CLR +  + IDTEFP  + ++ + + DEE Y +  F+V++ KLIQLG+T  +  G+IG
Sbjct: 5   EDCLRSYRFIAIDTEFPSTLRETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDINGRIG 64

Query: 93  GSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQK-RDIF 152
           G+WE NFSDF    DA +  +I FL +NGLD +K+++ GI I  F  +   +++K R   
Sbjct: 65  GTWEINFSDFGVD-DARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKTRRNI 124

Query: 153 RWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMARFCEGLEDGRL 212
            WVTFHG YDI YL+K       LP + E F+  V   +G V DLK MA  CEGL   RL
Sbjct: 125 TWVTFHGSYDIAYLLKGF-TGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEGL-SSRL 184

Query: 213 GLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRF 250
           GLE L       R G  H+AGS++ LTA    +++  F
Sbjct: 185 GLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKVLSPF 219

[Close]

BLAST of Pay0016141.1 vs. TAIR 10
Match: AT1G61470.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 159.1 bits (401), Expect = 5.7e-39
Identity = 92/231 (39.83%), Postives = 134/231 (58.01%), Query Frame = 0


Query: 19  QVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLI 78
           +VW  N  +E+    +CL+    + IDTEFPG + ++P D+ DE  Y++ +FNV+   LI
Sbjct: 4   EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPGCLKETPMDASDEIRYRDMKFNVDNTHLI 63

Query: 79  QLGITASNDFGQ-IGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASF 138
           QLG+T    FG+ I  +WE N SDF+      +  +I FL+ NGLD  K+++ GI I  F
Sbjct: 64  QLGLTL---FGKGITKTWEINLSDFNESKSLKNDKSIAFLKNNGLDLDKIREEGIGIEEF 123

Query: 139 TKKFLPII-QKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVG-IVRD 198
             +F  I+ +K    RWVTF G YD  YL+K +     LP++ +EF   V   +G  V D
Sbjct: 124 FMEFSQILNEKHGKMRWVTFQGSYDKAYLLKGL-TRKPLPETSKEFDETVQQLLGRFVYD 183

Query: 199 LKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMV 247
           +K MA  C GL   R GL+R+  +L  +R G  H+AGSDS LTA    +++
Sbjct: 184 VKKMAGLCSGL-SSRFGLQRIADVLQMRRVGKAHHAGSDSELTARVFTKLI 229

[Close]

BLAST of Pay0016141.1 vs. TAIR 10
Match: AT1G27890.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 152.1 bits (383), Expect = 6.9e-37
Identity = 88/223 (39.46%), Postives = 128/223 (57.40%), Query Frame = 0


Query: 19  QVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLI 78
           +VW  N   E+    +CL+  + + IDTEFPG + ++P D+ +E  Y++ +FNV+   LI
Sbjct: 3   EVWRWNKEVEMDSIRDCLKHFSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 62

Query: 79  QLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASFT 138
           QLG T  +  G I  +WE N SDF+      +  +I FL+ NGL+  K+ + GI I  F 
Sbjct: 63  QLGFTLFDRRG-ITKTWEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIGEEGIGIEEFF 122

Query: 139 KKFLPIIQKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVG-IVRDL 198
           + F  I++++D    WV F G YD  YL+K +     LP++ EEF   V   +G  V D+
Sbjct: 123 RDFSQILKEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDV 182

Query: 199 KHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTA 240
           K +A  C GL   R GL+R+  +L  KR G  H+AGSDS LTA
Sbjct: 183 KKIAESCSGL-SSRFGLQRIADVLQMKRVGKAHHAGSDSELTA 223

[Close]

BLAST of Pay0016141.1 vs. TAIR 10
Match: AT1G27820.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 151.8 bits (382), Expect = 9.0e-37
Identity = 87/223 (39.01%), Postives = 127/223 (56.95%), Query Frame = 0


Query: 19  QVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLI 78
           +VW  N   E+    +CL+  + + IDTEFPG + ++P D+ +E  Y++ +FNV+   LI
Sbjct: 8   EVWRWNKEVEMNSIRDCLKHCSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 67

Query: 79  QLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASFT 138
           QLG T  +  G    +WE N SDFD      +  +I FL+ NGL+  K+++ GI I  F 
Sbjct: 68  QLGFTLFDRRG-FAKTWEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIREEGIGIDEFF 127

Query: 139 KKFLPIIQKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVG-IVRDL 198
           + F  I+ ++D    WV F G YD  YL+K +     LP++ EEF   V   +G  V D+
Sbjct: 128 RDFSQILTEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVQQLLGKFVFDV 187

Query: 199 KHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTA 240
           K +A  C GL   + GL+R+  +L  KR G  H+AGSDS LTA
Sbjct: 188 KKIAESCSGL-SSQFGLQRIADVLQMKRVGKAHHAGSDSELTA 228

The following BLAST results are available for this feature:

BLAST of Pay0016141.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHJ0	1.8e-42	38.43	Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9LXM4	1.9e-39	42.66	Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
O64773	8.0e-38	39.83	Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9SKZ2	1.0e-32	33.33	Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9LXM2	5.0e-32	36.08	Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]

BLAST of Pay0016141.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TRG1	8.5e-168	98.00	Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A0A0LPP0	3.3e-135	85.66	Poly(A)-specific ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_2G270190 PE=3 SV...	[more]
A0A5A7TRF3	5.1e-120	95.61	Putative CCR4-associated factor 1-like protein 8 OS=Cucumis melo var. makuwa OX=...	[more]
A0A6J1G7L2	2.7e-89	60.74	Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111451625 PE=3...	[more]
A0A6J1CXP9	8.7e-88	56.75	Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111015407 PE=...	[more]

BLAST of Pay0016141.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0045730.1	1.8e-167	98.00	putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa] >TYJ...	[more]
XP_031736916.1	6.7e-135	85.66	putative CCR4-associated factor 1 homolog 8 [Cucumis sativus] >KGN61926.1 hypoth...	[more]
KAA0045720.1	1.0e-119	95.61	putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa] >TYJ...	[more]
XP_038895744.1	5.0e-114	68.38	putative CCR4-associated factor 1 homolog 8 [Benincasa hispida]	[more]
KAG6604931.1	1.5e-89	60.14	putative CCR4-associated factor 1-like 8, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of Pay0016141.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06450.1	1.3e-43	38.43	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G44240.1	1.3e-40	42.66	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G61470.1	5.7e-39	39.83	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G27890.1	6.9e-37	39.46	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G27820.1	9.0e-37	39.01	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 20..134 e-value: 1.4E-8 score: 34.4
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 4..267 e-value: 1.4E-63 score: 216.5
None	No IPR available	PANTHER	PTHR10797:SF57	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 3-RELATED	coord: 15..287
IPR039637	CCR4-NOT transcription complex subunit 7/8/Pop2	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 15..287
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 14..250

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Pay0016141	Pay0016141	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0016141.1-five_prime_utr	Pay0016141.1-five_prime_utr-chr11:2531580..2531696	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0016141.1-exon	Pay0016141.1-exon-chr11:2531580..2532599	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0016141.1-cds	Pay0016141.1-cds-chr11:2531697..2532599	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Pay0016141.1	Pay0016141.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006402	mRNA catabolic process
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component	GO:0030014	CCR4-NOT complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity