Pay0013885.1 (mRNA) Melon (Payzawat) v1

Overview


Name	Pay0013885.1
Type	mRNA
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	transcriptional corepressor LEUNIG_HOMOLOG isoform X1
Location	chr02: 17266776 .. 17270247 (-)
Sequence length	1453
RNA-Seq Expression	Pay0013885.1
Synteny	Pay0013885.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTGTTTTGCCTCCCTACACATCACGCTGTGCAAACCCTTGTTTCCTTGGTCTCCGTCGATTTTTCCATGTTGTATTTCCATTTTGTGTGGTGTGGTTGCGCCGTATTTCCGCTGAACTTCATCTTCGTTGGAAAACGATATCTCTCACATCTCTTCTCCCATCTCTGACTCCCAAAACCCCATCTTCTAACAAACTTCCTTTTCCTTCCAGATCCTCTGCTTTCCAATTTCATAGAGCTCAAAGTTCTTATCACATTCTCCTGTCATCTCTTCCTTCATCTTCTTCTTCTTTCAAATTTACCATCTCCTCTAAGGTACCCCCCATCCCCTTTTAGTGGGATTTTTAGTGTTACACTTTGGTTCTTTATTCATTTATTTTTGTGTTGCATTTTGGTTTCGGTTTTGTTGATGTGTAGGTGAATGAGGGCTAAACGCCTCCTCTTTTCACTTTGAAAGATCAGGATGGAAGGAATGTGAGTTTTTCTAAATTTAAAGGGAGGCATGTGGTTGTCTATTTCTATCATGTTGAAACTTTTGGTTGCACAAAACAGGTACTTTTTCTATGTTCTAAAATGTTGTTCATATTTTCTTCGTTTAAAATTGACTAATTTGATGCTAGTATATTTCGGGACTCTTTCTTGCTTGAAATAACAACACTTTGAGAAAATGTTGGAGTTTTGTTCTATCTGGATAACCCAAATTTGTTTGGATTGAACAAAACTATTTTTGGTTTAGTTGATTTACATTCAAAATTCTAACAATCCAATATTTGTTAACATAAGACACAGGTATTGTTTGTTCTTTGGTGTGGATTCTTGAAGATAAGAATCGAGCAACTTCAAGTATAGCAGCTAATGTTGCTATAAAGTTGGTCAGTGCTATACCAAATGCACTATTAAAAACCTTTTATTTTGGATCTTTCTCATGCTCTTTCATGTTTGCTAACTTCTCATCAAATACAAATATCTGTAGCATGTACTATAACACTGAATTTGATTATTTCAAATGTACCAAGTAAAAGCGAGGAAGCATTTTGGGAGATCCTTAACAAGTCAGAAGTTGTTCTTCATTTGATTGGCATTATTAGATACTTTTCTGGAGCTATGAACCTAATTGAAGGTATTTAACCTCTTTTTTCTTTTTTAAGTACATTACTCTGTCACTGGTTTGCATCCTTAGCAAGTACAACAAGTTTTGCCAATTCTTGTGACACTACAACTTATTTTCTTTTCCTTTCAGTTCTTAAGTTCAACGAAATAAATCTTTGAGTTACTAACCCATCTGAGTACTGTTTAAAGCGTTCTTTTAGATTTCACAGCTAACTTCCTTTCCATACATTATCAACCTAATAATTGTTTATTGAATTTGGGCCACAAAACCAGAAAAGGAAGGGACCTTTATCATCTGGAGCTGCTAACAATACTGGAACAGGGAATACCATTGGACCTAACTCCCAATCATCAACTCCATTAACTCACAGCTTGCTGATGGAGCTGTTATTGCCCCCAATATGTAGAATGTTAATAGCATGCCAAAGAATATGTTGTTGTATGTTGTTCTTTACGAATGATGGAACAGAGGGTCTTGCATCGTCCACAAACCAGCTGGTAAAGGAACTTATTACCTCAACAACATATTATGTGCATCAACAGAGAGACAAAAATTCTAACCAGTTCTATTGCATGAACATTTGCTTGTATCACAACCCATGCATCGGTCTGGTATAGAATAATTCTAGGGATCTTTGGTTAAAATTCCTGATGGCTAGTGAAGTATACATGTGTTATCAGTTTGATACTTAGTTTGATACTTAGAATAATATCTTTTAGCTTTCTTTCTTTTTAATTCCCAATGTTCTAGAATTTAGATTCCAATGGATACCAGTCTCTTTCTTATGACCATGTATGTGTGATAGATATGGATTAGCTGTGATGGCGGCGACAATTATTCTTGCATGTTTATTGTTTTACATGTTTGGCTATGTCTTCTTAACATGATATAAAATATCCTTTATTTTGTGCTGAAATATCATTTTCGATAGCTCTTCTGTGTCATTTACTTGATTAAACCGGTAATTATAATATTTAATTATTTCCCATTTTAGGAAGACATAGAACATCTTGGAGATATTGCCTCCTTGGATGACAATGTGGAATCTTTTCTCTCACATGATGATGGAGATAGAAGGGATTTGTTTAGCACATTGAAGCAGATCCCTTCTGAGCATGTTGCAGAAAATTCAAAGGGTAATCCATGATTGCTTCATTCAAACAGTGGTCATGGATGTCCTACTTCATTCAATTGAATGATAGAAAATATAATTTAGCTTTTAATTCCTTAACTGAACTTACGGTTCACTGTTCTAGTTCCTATATTTTAGTCTATTTAATTGTTTGCTAATGCATTTGATCGAGTTAATTGTTTTTAATATCACAAGGGTTGTCTTTTTATTTCCTTCCATACTTATGTTGTAACTTTGTTTTTACAGGATTGATAATGGCAAGGAGTATTATCCTTACTCCAACAAGAAAAGATCCCACATTGAGTGCATTAAGGAACTTTGCAGCAATTAGAAGAAAAGAACTTGGTTAGCTTTCTCTTTTGGTTTTCAAGAGATGTAATTATACTCTTAGTTTCTCTTTGAGTAAGCTTAACAGGGGGATGGTTTTATGAATAAAAGTATTGTCAATTTGTTTAACTTGTTTTTGGTTAGTTTTGGACATCTCTACACGTAGTGATACATTTGACTTATCCATGAATTGTTAATTAATTGCAGTTGGTTAGGCAATTGCAAGGTAAATCAATGTTTAGAAATCTTGAAATCTTGAGGTTGTGAAGTATGTTTTTCACATCTAATCAATGTTTAGTTTTTAGATTGGTTTAAATTTATCGTTTTAATCATTTATTTCAATCAATGCTTTAAATTTTGAGGACTTTGTATGCTTGTCATTGTGGAAAATTATTGAGTCTGGTTTATGTAAATATTTCAATTGGTTGGCATCTGAAGTATAATTCAATATCAAAATGAAGTCTCTTTTCAATCGGGTTTATGTTTGCAGGGAAGAGATATCCTTGATATAAACAAACTTGTTGGTCCTTTTGGCACTAAGGTTGGTATATTTTACTGTTTACATGTTAATTTTATTTTTGTACACTAAAGTTGGTATTGCATGCTATCTTTAGTTCAAGAAGGCTTGTATAACATGTTCTTCACTCTTTTTATATAAAGTAGGCACTTTTAGGCAAAATATAGGGTAGAAAGTTCTTTGAGCCACACCATATGTGTTGATCCTTTGAGGAAAAATTGACCTACGATACACCAAGTTCTTTGAGCCACACCGTATGTATTGATTCTATTCGAATTTTTTTAGTCATGTATCAAATTATTTCTTTTGTGGGTATAATAATTTTTATGAATACTAATTCATTTATTTTGCATGTATACAGATCGATACATGAAAATCATAC

mRNA sequence

ATGCGTGTTTTGCCTCCCTACACATCACGCTGTGCAAACCCTTGTTTCCTTGGTCTCCGTCGATTTTTCCATGTTGTATTTCCATTTTGTGTGGTGTGGTTGCGCCGTATTTCCGCTGAACTTCATCTTCGTTGGAAAACGATATCTCTCACATCTCTTCTCCCATCTCTGACTCCCAAAACCCCATCTTCTAACAAACTTCCTTTTCCTTCCAGATCCTCTGCTTTCCAATTTCATAGAGCTCAAAGTTCTTATCACATTCTCCTGTCATCTCTTCCTTCATCTTCTTCTTCTTTCAAATTTACCATCTCCTCTAAGTACATTACTCTGTCACTGAAAAGGAAGGGACCTTTATCATCTGGAGCTGCTAACAATACTGGAACAGGGAATACCATTGGACCTAACTCCCAATCATCAACTCCATTAACTCACAGCTTGCTGATGGAGCTGTTATTGCCCCCAATATGTAGAATGTTAATAGCATGCCAAAGAATATGTTGTTGTATGTTGTTCTTTACGAATGATGGAACAGAGGGTCTTGCATCGTCCACAAACCAGCTGGAAGACATAGAACATCTTGGAGATATTGCCTCCTTGGATGACAATGTGGAATCTTTTCTCTCACATGATGATGGAGATAGAAGGGATTTGTTTAGCACATTGAAGCAGATCCCTTCTGAGCATGTTGCAGAAAATTCAAAGGGTAATCCATGATTGCTTCATTCAAACAGTGGTCATGGATGTCCTACTTCATTCAATTGAATGATAGAAAATATAATTTAGCTTTTAATTCCTTAACTGAACTTACGGTTCACTGTTCTAGTTCCTATATTTTAGTCTATTTAATTGTTTGCTAATGCATTTGATCGAGTTAATTGTTTTTAATATCACAAGGGTTGTCTTTTTATTTCCTTCCATACTTATGTTGTAACTTTGTTTTTACAGGATTGATAATGGCAAGGAGTATTATCCTTACTCCAACAAGAAAAGATCCCACATTGAGTGCATTAAGGAACTTTGCAGCAATTAGAAGAAAAGAACTTGGGAAGAGATATCCTTGATATAAACAAACTTGTTGGTCCTTTTGGCACTAAGGTTGGTATATTTTACTGTTTACATGTTAATTTTATTTTTGTACACTAAAGTTGGTATTGCATGCTATCTTTAGTTCAAGAAGGCTTGTATAACATGTTCTTCACTCTTTTTATATAAAGTAGGCACTTTTAGGCAAAATATAGGGTAGAAAGTTCTTTGAGCCACACCATATGTGTTGATCCTTTGAGGAAAAATTGACCTACGATACACCAAGTTCTTTGAGCCACACCGTATGTATTGATTCTATTCGAATTTTTTTAGTCATGTATCAAATTATTTCTTTTGTGGGTATAATAATTTTTATGAATACTAATTCATTTATTTTGCATGTATACAGATCGATACATGAAAATCATAC

Coding sequence (CDS)

ATGCGTGTTTTGCCTCCCTACACATCACGCTGTGCAAACCCTTGTTTCCTTGGTCTCCGTCGATTTTTCCATGTTGTATTTCCATTTTGTGTGGTGTGGTTGCGCCGTATTTCCGCTGAACTTCATCTTCGTTGGAAAACGATATCTCTCACATCTCTTCTCCCATCTCTGACTCCCAAAACCCCATCTTCTAACAAACTTCCTTTTCCTTCCAGATCCTCTGCTTTCCAATTTCATAGAGCTCAAAGTTCTTATCACATTCTCCTGTCATCTCTTCCTTCATCTTCTTCTTCTTTCAAATTTACCATCTCCTCTAAGTACATTACTCTGTCACTGAAAAGGAAGGGACCTTTATCATCTGGAGCTGCTAACAATACTGGAACAGGGAATACCATTGGACCTAACTCCCAATCATCAACTCCATTAACTCACAGCTTGCTGATGGAGCTGTTATTGCCCCCAATATGTAGAATGTTAATAGCATGCCAAAGAATATGTTGTTGTATGTTGTTCTTTACGAATGATGGAACAGAGGGTCTTGCATCGTCCACAAACCAGCTGGAAGACATAGAACATCTTGGAGATATTGCCTCCTTGGATGACAATGTGGAATCTTTTCTCTCACATGATGATGGAGATAGAAGGGATTTGTTTAGCACATTGAAGCAGATCCCTTCTGAGCATGTTGCAGAAAATTCAAAGGGTAATCCATGA

Protein sequence

MRVLPPYTSRCANPCFLGLRRFFHVVFPFCVVWLRRISAELHLRWKTISLTSLLPSLTPKTPSSNKLPFPSRSSAFQFHRAQSSYHILLSSLPSSSSSFKFTISSKYITLSLKRKGPLSSGAANNTGTGNTIGPNSQSSTPLTHSLLMELLLPPICRMLIACQRICCCMLFFTNDGTEGLASSTNQLEDIEHLGDIASLDDNVESFLSHDDGDRRDLFSTLKQIPSEHVAENSKGNP

Homology

[Close]

BLAST of Pay0013885.1 vs. ExPASy Swiss-Prot
Match: O48847 (Transcriptional corepressor LEUNIG_HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=LUH PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.9e-19
Identity = 73/164 (44.51%), Postives = 97/164 (59.15%), Query Frame = 0


Query: 80  RAQSSYHILLSSLPSSSSSFK-FTISSKYITLSLKRKGPLSSGAANNTGTGNTIGP-NSQ 139
           ++ SS HI +  +  SSS  +   +S +    + KRKGP SSG AN+TGTGNT+GP NSQ
Sbjct: 342 QSSSSKHISMPPVQQSSSQQQDHLLSQQSQQNNRKRKGPSSSGPANSTGTGNTVGPSNSQ 401

Query: 140 SSTPLTHSLLMELLLPPICRMLIA-----CQRICCCMLFFTNDGTEGLASSTNQL--EDI 199
            STP TH+        P+  + IA        +    + + +DG  GLASS NQL  +D+
Sbjct: 402 PSTPSTHT--------PVDGVAIAGNMHHVNSMPKGPMMYGSDGIGGLASSANQLLQDDM 461

Query: 200 EHLGDIASLDDNVESFLSHDDGDRRDLFSTLKQIPSEHVAENSK 235
           +  GD+ +L+DNVESFLS DDGD   LF TLK+  S H  E SK
Sbjct: 462 DQFGDVGALEDNVESFLSQDDGDGGSLFGTLKRNSSVH-TETSK 496

[Close]

BLAST of Pay0013885.1 vs. ExPASy Swiss-Prot
Match: Q9FUY2 (Transcriptional corepressor LEUNIG OS=Arabidopsis thaliana OX=3702 GN=LUG PE=1 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 5.0e-11
Identity = 48/107 (44.86%), Postives = 66/107 (61.68%), Query Frame = 0


Query: 113 KRKGPL-SSGAANNTGTGNTIGPNSQS--STPLTHSLLMELLLPPICRMLIACQRICCCM 172
           KRK P+ SSG AN++GT NT GP+  S  STP TH+    + +P +     + +     M
Sbjct: 525 KRKQPVSSSGPANSSGTANTAGPSPSSAPSTPSTHTPGDVISMPNLPHSGGSSK----SM 584

Query: 173 LFFTNDGTEGLASSTNQLEDIEHLGDIASLDDNVESFLSHDDGDRRD 217
           + F  +GT  L S +NQL D++   +  SLDDNVESFLS +DGD+RD
Sbjct: 585 MMFGTEGTGTLTSPSNQLADMDRFVEDGSLDDNVESFLSQEDGDQRD 627

[Close]

BLAST of Pay0013885.1 vs. ExPASy TrEMBL
Match: A0A5D3D2A1 (Transcriptional corepressor LEUNIG-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002640 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 2.1e-36
Identity = 92/147 (62.59%), Postives = 109/147 (74.15%), Query Frame = 0


Query: 89  LSSLPSSSSSFKFTISSKYITLSLKRKGPLSSGAANNTGTGNTIGPNSQSSTPLTHSLLM 148
           +  +  SSS  +  +  + +  + KRKGP SSGAAN+TGTGNTIGPNSQ STP TH+   
Sbjct: 343 IPQMQQSSSQQQDGLHPQQVQQNRKRKGPSSSGAANSTGTGNTIGPNSQPSTPSTHTPGD 402

Query: 149 ELLLPPICRMLIACQRICCCMLFFTNDGTEGLASSTNQLEDIEHLGDIASLDDNVESFLS 208
             ++ P  + + +  +    ML +TNDGT GLASSTNQLEDIEHLGDIASLDDNVESFLS
Sbjct: 403 GAVIAPNMQNVNSMPK---NMLLYTNDGTGGLASSTNQLEDIEHLGDIASLDDNVESFLS 462

Query: 209 HDDGDRRDLFSTLKQIPSEHVAENSKG 236
           HDDGD RDLF TLK+IPSEH AENSKG
Sbjct: 463 HDDGDGRDLFGTLKRIPSEHAAENSKG 486

[Close]

BLAST of Pay0013885.1 vs. ExPASy TrEMBL
Match: A0A1S3AVV7 (transcriptional corepressor LEUNIG_HOMOLOG isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483487 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 2.1e-36
Identity = 92/147 (62.59%), Postives = 109/147 (74.15%), Query Frame = 0


Query: 89  LSSLPSSSSSFKFTISSKYITLSLKRKGPLSSGAANNTGTGNTIGPNSQSSTPLTHSLLM 148
           +  +  SSS  +  +  + +  + KRKGP SSGAAN+TGTGNTIGPNSQ STP TH+   
Sbjct: 343 IPQMQQSSSQQQDGLHPQQVQQNRKRKGPSSSGAANSTGTGNTIGPNSQPSTPSTHTPGD 402

Query: 149 ELLLPPICRMLIACQRICCCMLFFTNDGTEGLASSTNQLEDIEHLGDIASLDDNVESFLS 208
             ++ P  + + +  +    ML +TNDGT GLASSTNQLEDIEHLGDIASLDDNVESFLS
Sbjct: 403 GAVIAPNMQNVNSMPK---NMLLYTNDGTGGLASSTNQLEDIEHLGDIASLDDNVESFLS 462

Query: 209 HDDGDRRDLFSTLKQIPSEHVAENSKG 236
           HDDGD RDLF TLK+IPSEH AENSKG
Sbjct: 463 HDDGDGRDLFGTLKRIPSEHAAENSKG 486

[Close]

BLAST of Pay0013885.1 vs. ExPASy TrEMBL
Match: A0A1S4DSY1 (transcriptional corepressor LEUNIG_HOMOLOG isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483487 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 2.1e-36
Identity = 92/147 (62.59%), Postives = 109/147 (74.15%), Query Frame = 0


Query: 89  LSSLPSSSSSFKFTISSKYITLSLKRKGPLSSGAANNTGTGNTIGPNSQSSTPLTHSLLM 148
           +  +  SSS  +  +  + +  + KRKGP SSGAAN+TGTGNTIGPNSQ STP TH+   
Sbjct: 313 IPQMQQSSSQQQDGLHPQQVQQNRKRKGPSSSGAANSTGTGNTIGPNSQPSTPSTHTPGD 372

Query: 149 ELLLPPICRMLIACQRICCCMLFFTNDGTEGLASSTNQLEDIEHLGDIASLDDNVESFLS 208
             ++ P  + + +  +    ML +TNDGT GLASSTNQLEDIEHLGDIASLDDNVESFLS
Sbjct: 373 GAVIAPNMQNVNSMPK---NMLLYTNDGTGGLASSTNQLEDIEHLGDIASLDDNVESFLS 432

Query: 209 HDDGDRRDLFSTLKQIPSEHVAENSKG 236
           HDDGD RDLF TLK+IPSEH AENSKG
Sbjct: 433 HDDGDGRDLFGTLKRIPSEHAAENSKG 456

[Close]

BLAST of Pay0013885.1 vs. ExPASy TrEMBL
Match: A0A1S3AWA6 (transcriptional corepressor LEUNIG_HOMOLOG isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483487 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 2.1e-36
Identity = 92/147 (62.59%), Postives = 109/147 (74.15%), Query Frame = 0


Query: 89  LSSLPSSSSSFKFTISSKYITLSLKRKGPLSSGAANNTGTGNTIGPNSQSSTPLTHSLLM 148
           +  +  SSS  +  +  + +  + KRKGP SSGAAN+TGTGNTIGPNSQ STP TH+   
Sbjct: 314 IPQMQQSSSQQQDGLHPQQVQQNRKRKGPSSSGAANSTGTGNTIGPNSQPSTPSTHTPGD 373

Query: 149 ELLLPPICRMLIACQRICCCMLFFTNDGTEGLASSTNQLEDIEHLGDIASLDDNVESFLS 208
             ++ P  + + +  +    ML +TNDGT GLASSTNQLEDIEHLGDIASLDDNVESFLS
Sbjct: 374 GAVIAPNMQNVNSMPK---NMLLYTNDGTGGLASSTNQLEDIEHLGDIASLDDNVESFLS 433

Query: 209 HDDGDRRDLFSTLKQIPSEHVAENSKG 236
           HDDGD RDLF TLK+IPSEH AENSKG
Sbjct: 434 HDDGDGRDLFGTLKRIPSEHAAENSKG 457

[Close]

BLAST of Pay0013885.1 vs. ExPASy TrEMBL
Match: A0A0A0L6S5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G131970 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 8.0e-36
Identity = 91/147 (61.90%), Postives = 108/147 (73.47%), Query Frame = 0


Query: 89  LSSLPSSSSSFKFTISSKYITLSLKRKGPLSSGAANNTGTGNTIGPNSQSSTPLTHSLLM 148
           +  +  SSS  +  +  + +  + KRKGP SSGAAN+TGTGNTIGPNSQ STP TH+   
Sbjct: 343 IPQMQQSSSQQQDGLHPQQVQQNRKRKGPSSSGAANSTGTGNTIGPNSQPSTPSTHTPGD 402

Query: 149 ELLLPPICRMLIACQRICCCMLFFTNDGTEGLASSTNQLEDIEHLGDIASLDDNVESFLS 208
             ++ P  + + +  +    ML + NDGT GLASSTNQLEDIEHLGDIASLDDNVESFLS
Sbjct: 403 GAVIAPNMQNVTSMPK---NMLLYGNDGTGGLASSTNQLEDIEHLGDIASLDDNVESFLS 462

Query: 209 HDDGDRRDLFSTLKQIPSEHVAENSKG 236
           HDDGD RDLF TLK+IPSEH AENSKG
Sbjct: 463 HDDGDGRDLFGTLKRIPSEHAAENSKG 486

[Close]

BLAST of Pay0013885.1 vs. NCBI nr
Match: KAA0049157.1 (transcriptional corepressor LEUNIG_HOMOLOG isoform X1 [Cucumis melo var. makuwa] >TYK17404.1 transcriptional corepressor LEUNIG-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 162.5 bits (410), Expect = 4.3e-36
Identity = 92/147 (62.59%), Postives = 109/147 (74.15%), Query Frame = 0


Query: 89  LSSLPSSSSSFKFTISSKYITLSLKRKGPLSSGAANNTGTGNTIGPNSQSSTPLTHSLLM 148
           +  +  SSS  +  +  + +  + KRKGP SSGAAN+TGTGNTIGPNSQ STP TH+   
Sbjct: 343 IPQMQQSSSQQQDGLHPQQVQQNRKRKGPSSSGAANSTGTGNTIGPNSQPSTPSTHTPGD 402

Query: 149 ELLLPPICRMLIACQRICCCMLFFTNDGTEGLASSTNQLEDIEHLGDIASLDDNVESFLS 208
             ++ P  + + +  +    ML +TNDGT GLASSTNQLEDIEHLGDIASLDDNVESFLS
Sbjct: 403 GAVIAPNMQNVNSMPK---NMLLYTNDGTGGLASSTNQLEDIEHLGDIASLDDNVESFLS 462

Query: 209 HDDGDRRDLFSTLKQIPSEHVAENSKG 236
           HDDGD RDLF TLK+IPSEH AENSKG
Sbjct: 463 HDDGDGRDLFGTLKRIPSEHAAENSKG 486

[Close]

BLAST of Pay0013885.1 vs. NCBI nr
Match: XP_008438369.1 (PREDICTED: transcriptional corepressor LEUNIG_HOMOLOG isoform X1 [Cucumis melo])

HSP 1 Score: 162.5 bits (410), Expect = 4.3e-36
Identity = 92/147 (62.59%), Postives = 109/147 (74.15%), Query Frame = 0


Query: 89  LSSLPSSSSSFKFTISSKYITLSLKRKGPLSSGAANNTGTGNTIGPNSQSSTPLTHSLLM 148
           +  +  SSS  +  +  + +  + KRKGP SSGAAN+TGTGNTIGPNSQ STP TH+   
Sbjct: 343 IPQMQQSSSQQQDGLHPQQVQQNRKRKGPSSSGAANSTGTGNTIGPNSQPSTPSTHTPGD 402

Query: 149 ELLLPPICRMLIACQRICCCMLFFTNDGTEGLASSTNQLEDIEHLGDIASLDDNVESFLS 208
             ++ P  + + +  +    ML +TNDGT GLASSTNQLEDIEHLGDIASLDDNVESFLS
Sbjct: 403 GAVIAPNMQNVNSMPK---NMLLYTNDGTGGLASSTNQLEDIEHLGDIASLDDNVESFLS 462

Query: 209 HDDGDRRDLFSTLKQIPSEHVAENSKG 236
           HDDGD RDLF TLK+IPSEH AENSKG
Sbjct: 463 HDDGDGRDLFGTLKRIPSEHAAENSKG 486

[Close]

BLAST of Pay0013885.1 vs. NCBI nr
Match: XP_008438370.1 (PREDICTED: transcriptional corepressor LEUNIG_HOMOLOG isoform X2 [Cucumis melo])

HSP 1 Score: 162.5 bits (410), Expect = 4.3e-36
Identity = 92/147 (62.59%), Postives = 109/147 (74.15%), Query Frame = 0


Query: 89  LSSLPSSSSSFKFTISSKYITLSLKRKGPLSSGAANNTGTGNTIGPNSQSSTPLTHSLLM 148
           +  +  SSS  +  +  + +  + KRKGP SSGAAN+TGTGNTIGPNSQ STP TH+   
Sbjct: 314 IPQMQQSSSQQQDGLHPQQVQQNRKRKGPSSSGAANSTGTGNTIGPNSQPSTPSTHTPGD 373

Query: 149 ELLLPPICRMLIACQRICCCMLFFTNDGTEGLASSTNQLEDIEHLGDIASLDDNVESFLS 208
             ++ P  + + +  +    ML +TNDGT GLASSTNQLEDIEHLGDIASLDDNVESFLS
Sbjct: 374 GAVIAPNMQNVNSMPK---NMLLYTNDGTGGLASSTNQLEDIEHLGDIASLDDNVESFLS 433

Query: 209 HDDGDRRDLFSTLKQIPSEHVAENSKG 236
           HDDGD RDLF TLK+IPSEH AENSKG
Sbjct: 434 HDDGDGRDLFGTLKRIPSEHAAENSKG 457

[Close]

BLAST of Pay0013885.1 vs. NCBI nr
Match: XP_016899063.1 (PREDICTED: transcriptional corepressor LEUNIG_HOMOLOG isoform X3 [Cucumis melo])

HSP 1 Score: 162.5 bits (410), Expect = 4.3e-36
Identity = 92/147 (62.59%), Postives = 109/147 (74.15%), Query Frame = 0


Query: 89  LSSLPSSSSSFKFTISSKYITLSLKRKGPLSSGAANNTGTGNTIGPNSQSSTPLTHSLLM 148
           +  +  SSS  +  +  + +  + KRKGP SSGAAN+TGTGNTIGPNSQ STP TH+   
Sbjct: 313 IPQMQQSSSQQQDGLHPQQVQQNRKRKGPSSSGAANSTGTGNTIGPNSQPSTPSTHTPGD 372

Query: 149 ELLLPPICRMLIACQRICCCMLFFTNDGTEGLASSTNQLEDIEHLGDIASLDDNVESFLS 208
             ++ P  + + +  +    ML +TNDGT GLASSTNQLEDIEHLGDIASLDDNVESFLS
Sbjct: 373 GAVIAPNMQNVNSMPK---NMLLYTNDGTGGLASSTNQLEDIEHLGDIASLDDNVESFLS 432

Query: 209 HDDGDRRDLFSTLKQIPSEHVAENSKG 236
           HDDGD RDLF TLK+IPSEH AENSKG
Sbjct: 433 HDDGDGRDLFGTLKRIPSEHAAENSKG 456

[Close]

BLAST of Pay0013885.1 vs. NCBI nr
Match: XP_011650879.1 (transcriptional corepressor LEUNIG_HOMOLOG isoform X1 [Cucumis sativus])

HSP 1 Score: 160.6 bits (405), Expect = 1.6e-35
Identity = 91/147 (61.90%), Postives = 108/147 (73.47%), Query Frame = 0


Query: 89  LSSLPSSSSSFKFTISSKYITLSLKRKGPLSSGAANNTGTGNTIGPNSQSSTPLTHSLLM 148
           +  +  SSS  +  +  + +  + KRKGP SSGAAN+TGTGNTIGPNSQ STP TH+   
Sbjct: 343 IPQMQQSSSQQQDGLHPQQVQQNRKRKGPSSSGAANSTGTGNTIGPNSQPSTPSTHTPGD 402

Query: 149 ELLLPPICRMLIACQRICCCMLFFTNDGTEGLASSTNQLEDIEHLGDIASLDDNVESFLS 208
             ++ P  + + +  +    ML + NDGT GLASSTNQLEDIEHLGDIASLDDNVESFLS
Sbjct: 403 GAVIAPNMQNVTSMPK---NMLLYGNDGTGGLASSTNQLEDIEHLGDIASLDDNVESFLS 462

Query: 209 HDDGDRRDLFSTLKQIPSEHVAENSKG 236
           HDDGD RDLF TLK+IPSEH AENSKG
Sbjct: 463 HDDGDGRDLFGTLKRIPSEHAAENSKG 486

[Close]

BLAST of Pay0013885.1 vs. TAIR 10
Match: AT2G32700.6 (LEUNIG_homolog )

HSP 1 Score: 102.1 bits (253), Expect = 6.5e-22
Identity = 73/162 (45.06%), Postives = 97/162 (59.88%), Query Frame = 0


Query: 80  RAQSSYHILLSSLPSSSSSFK-FTISSKYITLSLKRKGPLSSGAANNTGTGNTIGP-NSQ 139
           ++ SS HI +  +  SSS  +   +S +    + KRKGP SSG AN+TGTGNT+GP NSQ
Sbjct: 342 QSSSSKHISMPPVQQSSSQQQDHLLSQQSQQNNRKRKGPSSSGPANSTGTGNTVGPSNSQ 401

Query: 140 SSTPLTHSLLMELLLPPICRMLIA-----CQRICCCMLFFTNDGTEGLASSTNQLEDIEH 199
            STP TH+        P+  + IA        +    + + +DG  GLASS NQL+D++ 
Sbjct: 402 PSTPSTHT--------PVDGVAIAGNMHHVNSMPKGPMMYGSDGIGGLASSANQLDDMDQ 461

Query: 200 LGDIASLDDNVESFLSHDDGDRRDLFSTLKQIPSEHVAENSK 235
            GD+ +L+DNVESFLS DDGD   LF TLK+  S H  E SK
Sbjct: 462 FGDVGALEDNVESFLSQDDGDGGSLFGTLKRNSSVH-TETSK 494

[Close]

BLAST of Pay0013885.1 vs. TAIR 10
Match: AT2G32700.3 (LEUNIG_homolog )

HSP 1 Score: 97.1 bits (240), Expect = 2.1e-20
Identity = 73/164 (44.51%), Postives = 97/164 (59.15%), Query Frame = 0


Query: 80  RAQSSYHILLSSLPSSSSSFK-FTISSKYITLSLKRKGPLSSGAANNTGTGNTIGP-NSQ 139
           ++ SS HI +  +  SSS  +   +S +    + KRKGP SSG AN+TGTGNT+GP NSQ
Sbjct: 342 QSSSSKHISMPPVQQSSSQQQDHLLSQQSQQNNRKRKGPSSSGPANSTGTGNTVGPSNSQ 401

Query: 140 SSTPLTHSLLMELLLPPICRMLIA-----CQRICCCMLFFTNDGTEGLASSTNQL--EDI 199
            STP TH+        P+  + IA        +    + + +DG  GLASS NQL  +D+
Sbjct: 402 PSTPSTHT--------PVDGVAIAGNMHHVNSMPKGPMMYGSDGIGGLASSANQLLQDDM 461

Query: 200 EHLGDIASLDDNVESFLSHDDGDRRDLFSTLKQIPSEHVAENSK 235
           +  GD+ +L+DNVESFLS DDGD   LF TLK+  S H  E SK
Sbjct: 462 DQFGDVGALEDNVESFLSQDDGDGGSLFGTLKRNSSVH-TETSK 496

[Close]

BLAST of Pay0013885.1 vs. TAIR 10
Match: AT2G32700.5 (LEUNIG_homolog )

HSP 1 Score: 97.1 bits (240), Expect = 2.1e-20
Identity = 73/164 (44.51%), Postives = 97/164 (59.15%), Query Frame = 0


Query: 80  RAQSSYHILLSSLPSSSSSFK-FTISSKYITLSLKRKGPLSSGAANNTGTGNTIGP-NSQ 139
           ++ SS HI +  +  SSS  +   +S +    + KRKGP SSG AN+TGTGNT+GP NSQ
Sbjct: 342 QSSSSKHISMPPVQQSSSQQQDHLLSQQSQQNNRKRKGPSSSGPANSTGTGNTVGPSNSQ 401

Query: 140 SSTPLTHSLLMELLLPPICRMLIA-----CQRICCCMLFFTNDGTEGLASSTNQL--EDI 199
            STP TH+        P+  + IA        +    + + +DG  GLASS NQL  +D+
Sbjct: 402 PSTPSTHT--------PVDGVAIAGNMHHVNSMPKGPMMYGSDGIGGLASSANQLLQDDM 461

Query: 200 EHLGDIASLDDNVESFLSHDDGDRRDLFSTLKQIPSEHVAENSK 235
           +  GD+ +L+DNVESFLS DDGD   LF TLK+  S H  E SK
Sbjct: 462 DQFGDVGALEDNVESFLSQDDGDGGSLFGTLKRNSSVH-TETSK 496

[Close]

BLAST of Pay0013885.1 vs. TAIR 10
Match: AT2G32700.4 (LEUNIG_homolog )

HSP 1 Score: 97.1 bits (240), Expect = 2.1e-20
Identity = 73/164 (44.51%), Postives = 97/164 (59.15%), Query Frame = 0


Query: 80  RAQSSYHILLSSLPSSSSSFK-FTISSKYITLSLKRKGPLSSGAANNTGTGNTIGP-NSQ 139
           ++ SS HI +  +  SSS  +   +S +    + KRKGP SSG AN+TGTGNT+GP NSQ
Sbjct: 342 QSSSSKHISMPPVQQSSSQQQDHLLSQQSQQNNRKRKGPSSSGPANSTGTGNTVGPSNSQ 401

Query: 140 SSTPLTHSLLMELLLPPICRMLIA-----CQRICCCMLFFTNDGTEGLASSTNQL--EDI 199
            STP TH+        P+  + IA        +    + + +DG  GLASS NQL  +D+
Sbjct: 402 PSTPSTHT--------PVDGVAIAGNMHHVNSMPKGPMMYGSDGIGGLASSANQLLQDDM 461

Query: 200 EHLGDIASLDDNVESFLSHDDGDRRDLFSTLKQIPSEHVAENSK 235
           +  GD+ +L+DNVESFLS DDGD   LF TLK+  S H  E SK
Sbjct: 462 DQFGDVGALEDNVESFLSQDDGDGGSLFGTLKRNSSVH-TETSK 496

[Close]

BLAST of Pay0013885.1 vs. TAIR 10
Match: AT2G32700.1 (LEUNIG_homolog )

HSP 1 Score: 97.1 bits (240), Expect = 2.1e-20
Identity = 73/164 (44.51%), Postives = 97/164 (59.15%), Query Frame = 0


Query: 80  RAQSSYHILLSSLPSSSSSFK-FTISSKYITLSLKRKGPLSSGAANNTGTGNTIGP-NSQ 139
           ++ SS HI +  +  SSS  +   +S +    + KRKGP SSG AN+TGTGNT+GP NSQ
Sbjct: 342 QSSSSKHISMPPVQQSSSQQQDHLLSQQSQQNNRKRKGPSSSGPANSTGTGNTVGPSNSQ 401

Query: 140 SSTPLTHSLLMELLLPPICRMLIA-----CQRICCCMLFFTNDGTEGLASSTNQL--EDI 199
            STP TH+        P+  + IA        +    + + +DG  GLASS NQL  +D+
Sbjct: 402 PSTPSTHT--------PVDGVAIAGNMHHVNSMPKGPMMYGSDGIGGLASSANQLLQDDM 461

Query: 200 EHLGDIASLDDNVESFLSHDDGDRRDLFSTLKQIPSEHVAENSK 235
           +  GD+ +L+DNVESFLS DDGD   LF TLK+  S H  E SK
Sbjct: 462 DQFGDVGALEDNVESFLSQDDGDGGSLFGTLKRNSSVH-TETSK 496

The following BLAST results are available for this feature:

BLAST of Pay0013885.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48847	2.9e-19	44.51	Transcriptional corepressor LEUNIG_HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=LU...	[more]
Q9FUY2	5.0e-11	44.86	Transcriptional corepressor LEUNIG OS=Arabidopsis thaliana OX=3702 GN=LUG PE=1 S...	[more]

BLAST of Pay0013885.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D2A1	2.1e-36	62.59	Transcriptional corepressor LEUNIG-like protein isoform X1 OS=Cucumis melo var. ...	[more]
A0A1S3AVV7	2.1e-36	62.59	transcriptional corepressor LEUNIG_HOMOLOG isoform X1 OS=Cucumis melo OX=3656 GN...	[more]
A0A1S4DSY1	2.1e-36	62.59	transcriptional corepressor LEUNIG_HOMOLOG isoform X3 OS=Cucumis melo OX=3656 GN...	[more]
A0A1S3AWA6	2.1e-36	62.59	transcriptional corepressor LEUNIG_HOMOLOG isoform X2 OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0L6S5	8.0e-36	61.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G131970 PE=4 SV=1	[more]

BLAST of Pay0013885.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0049157.1	4.3e-36	62.59	transcriptional corepressor LEUNIG_HOMOLOG isoform X1 [Cucumis melo var. makuwa]...	[more]
XP_008438369.1	4.3e-36	62.59	PREDICTED: transcriptional corepressor LEUNIG_HOMOLOG isoform X1 [Cucumis melo]	[more]
XP_008438370.1	4.3e-36	62.59	PREDICTED: transcriptional corepressor LEUNIG_HOMOLOG isoform X2 [Cucumis melo]	[more]
XP_016899063.1	4.3e-36	62.59	PREDICTED: transcriptional corepressor LEUNIG_HOMOLOG isoform X3 [Cucumis melo]	[more]
XP_011650879.1	1.6e-35	61.90	transcriptional corepressor LEUNIG_HOMOLOG isoform X1 [Cucumis sativus]	[more]

BLAST of Pay0013885.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32700.6	6.5e-22	45.06	LEUNIG_homolog	[more]
AT2G32700.3	2.1e-20	44.51	LEUNIG_homolog	[more]
AT2G32700.5	2.1e-20	44.51	LEUNIG_homolog	[more]
AT2G32700.4	2.1e-20	44.51	LEUNIG_homolog	[more]
AT2G32700.1	2.1e-20	44.51	LEUNIG_homolog	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..138
None	No IPR available	PANTHER	PTHR44376:SF9	TRANSCRIPTIONAL COREPRESSOR LEUNIG_HOMOLOG	coord: 110..235
IPR044716	Transcriptional corepressor LEUNIG-like	PANTHER	PTHR44376	TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8	coord: 110..235

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Pay0013885	Pay0013885	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0013885.1-three_prime_utr	Pay0013885.1-three_prime_utr-chr02:17266776..17267184	three_prime_UTR
Pay0013885.1-three_prime_utr	Pay0013885.1-three_prime_utr-chr02:17267657..17267986	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0013885.1-exon	Pay0013885.1-exon-chr02:17266776..17267184	exon
Pay0013885.1-exon	Pay0013885.1-exon-chr02:17267657..17268139	exon
Pay0013885.1-exon	Pay0013885.1-exon-chr02:17268637..17268861	exon
Pay0013885.1-exon	Pay0013885.1-exon-chr02:17269079..17269096	exon
Pay0013885.1-exon	Pay0013885.1-exon-chr02:17269930..17270247	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0013885.1-cds	Pay0013885.1-cds-chr02:17267987..17268139	CDS
Pay0013885.1-cds	Pay0013885.1-cds-chr02:17268637..17268861	CDS
Pay0013885.1-cds	Pay0013885.1-cds-chr02:17269079..17269096	CDS
Pay0013885.1-cds	Pay0013885.1-cds-chr02:17269930..17270247	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Pay0013885.1	Pay0013885.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003714	transcription corepressor activity