Pay0013339.1 (mRNA) Melon (Payzawat) v1

Overview


Name	Pay0013339.1
Type	mRNA
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Ribonuclease H
Location	chr02: 17370143 .. 17371931 (-)
Sequence length	1395
RNA-Seq Expression	Pay0013339.1
Synteny	Pay0013339.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCAATTAGGTATCTCAGTAGAAGAGTTATCAAATAGTAAACTGTTGATTCAAGGCTTTAATCAAGGAGCACAACGGGCAATAGGCACTGTTCGTTTGTAGATCATCAAAGGGGATTTGCAGGCAAGCACAATATTCCATGTGATCGATTCGAGGACTACTTATAAAATGTTATTGGGACGTCCATGGATACATGAAAATGGAATAGTAACCTCTACGCTTCATCAATGCTTCAAATTTTATAAACAGGGAATTTGGAAGGTTGATGCTGACTCTAGGCCATTTACAAAGGCTGAGTCTCACTTCGCTGATGCAAAATTTTATACAAAAAGTGAAGACGTGAGTGAAATCATATCAACTGAAGTTCCAGTGACTAAGGGCACTTTTAAGAACGAGCAAGAAATGATCACAAGCAAGAAAACAAATAAAGGGGATGCACTTAATAGTCAACAAAATGGTGAATTGACGACCGAAACTAAGTTAAGGGCGCCAGAGGCTGAAAAGATAGCAACCTTACAAAAGGAAGTCTCAAATCCCCCTGTTTTACGTTATATTCCTTTGTCTCGACGTAAGAAGGGAGAATCACCATTCGCAGAATGTTCGAAAAATCTGACGATAAAAAATACCGAGATATTAAAGGAAAATTTCACCACACCGCTTACCAAGATAGAGAAAGGAGAAGCGAAAAAAATTGAGAAAAAAGACTTAGAAGCATACCTTCCAGAAAGACGAACAGTGGAGGGATTCGACCCAAAGGCATATAAGTTGATGGCAAAGGCGGGTTATGACTTTACAACTCGTACTGAGCTTAAAAGCGTGAAAATATTTGACGAAAGGCCTGAGCTTTCCCCTACTCAAAAGAAGCTTCAAAAACAAGGATATTCTATACCTAATTCCAGAGCTGGAATTGGATATCAGTCTTCTGAACCAGTCCGAATAATTGGTAAAGGAAAAGCAAAAGTTCCTAATACATGCCACATTACAGTTGAAGAAAGCAAAGATTCTAAAGAGGGTAAAAAAGATAGATGTTAAAGAAGTTCAGTTTTTGATCGCATTGCTTTTTCTGTTATACGTCCACAGGGTGATTACATCGATAGCAAAAGACAGTAATCAAGTTTCAACCTGCAGCTCCACTCGACTTTCTGCCTTTCAAAGGCTAAACACAAATGCAAAGAAAGTACAATCTATAAGCCCAACTCCGACCACAAGAAAATCTGCCTTCAAAAGGTTAAGCGTGTCAGTAACAAGAGACCAAAAGAAAGCCTCCATATCCGTCTCAAACAAATCTAGCCTAGTGACAGAAGAGGAGGAAATTCGTAGTGCATTTCCATCAAGAATGAAAAGAAAGATGTTCGTCTCAGTAAATACAGAGGATTAATTGAAAGTAAAGCGACATGGTGTTGTTTTTACTCGACCTGAAGATAATGAACCAGAAGATGAAGTAGATGTGGCAGGTTGTTGCCATGTTACAATAGAAGAGACATCCGATCATGATATATTTGAAGAGGATGCCGAAGCGGCTCCGTTATTACTTGAGGATGGGGGTCAATCAACGATTGACGAGTTAAAAGAAGTCAATCTTAGTACGAAAGAAGAACCTCGTCCAACCTTCATAAGCACCCAACTTTCTGACAATGATGAAAATGAGTATGTAAACTTACTCAAAGCATATAAAGATGTCTTTGCATGGTCATATAAGGAAATTCCTGGACTCGATCCAAAGGTGGCCGTTCATCGCTTAGCGATCAAACCAGAGCATCGGCCAGTCAAGCAAGCCCAACGATGA

mRNA sequence

ATGAATCAATTAGGTATCTCAGTAGAAGAGTTATCAAATAGTAAACTGTTGATTCAAGGCTTTAATCAAGGAGCACAACGGGCAATAGGCACTGTTCGTTTCACAATATTCCATGTGATCGATTCGAGGACTACTTATAAAATGTTATTGGGACGTCCATGGATACATGAAAATGGAATAGTAACCTCTACGCTTCATCAATGCTTCAAATTTTATAAACAGGGAATTTGGAAGGTTGATGCTGACTCTAGGCCATTTACAAAGGCTGAGTCTCACTTCGCTGATGCAAAATTTTATACAAAAAGTGAAGACGTGAGTGAAATCATATCAACTGAAGTTCCAGTGACTAAGGGCACTTTTAAGAACGAGCAAGAAATGATCACAAGCAAGAAAACAAATAAAGGGGATGCACTTAATAGTCAACAAAATGGTGAATTGACGACCGAAACTAAGTTAAGGGCGCCAGAGGCTGAAAAGATAGCAACCTTACAAAAGGAAGTCTCAAATCCCCCTGTTTTACGTTATATTCCTTTGTCTCGACGTAAGAAGGGAGAATCACCATTCGCAGAATGTTCGAAAAATCTGACGATAAAAAATACCGAGATATTAAAGGAAAATTTCACCACACCGCTTACCAAGATAGAGAAAGGAGAAGCGAAAAAAATTGAGAAAAAAGACTTAGAAGCATACCTTCCAGAAAGACGAACAGTGGAGGGATTCGACCCAAAGGCATATAAGTTGATGGCAAAGGCGGGTTATGACTTTACAACTCGTACTGAGCTTAAAAGCGTGAAAATATTTGACGAAAGGCCTGAGCTTTCCCCTACTCAAAAGAAGCTTCAAAAACAAGGATATTCTATACCTAATTCCAGAGCTGGAATTGGATATCAGCTAAACACAAATGCAAAGAAAGTACAATCTATAAGCCCAACTCCGACCACAAGAAAATCTGCCTTCAAAAGGTTAAGCGTGTCAGTAACAAGAGACCAAAAGAAAGCCTCCATATCCGTCTCAAACAAATCTAGCCTAGTGACAGAAGAGGAGGAAATTCGTAGTGCATTTCCATCAAGAATGAAAAGAAAGATGTTCACATCCGATCATGATATATTTGAAGAGGATGCCGAAGCGGCTCCGTTATTACTTGAGGATGGGGGTCAATCAACGATTGACGAGTTAAAAGAAGTCAATCTTAGTACGAAAGAAGAACCTCGTCCAACCTTCATAAGCACCCAACTTTCTGACAATGATGAAAATGAGTATGTAAACTTACTCAAAGCATATAAAGATGTCTTTGCATGGTCATATAAGGAAATTCCTGGACTCGATCCAAAGGTGGCCGTTCATCGCTTAGCGATCAAACCAGAGCATCGGCCAGTCAAGCAAGCCCAACGATGA

Coding sequence (CDS)

ATGAATCAATTAGGTATCTCAGTAGAAGAGTTATCAAATAGTAAACTGTTGATTCAAGGCTTTAATCAAGGAGCACAACGGGCAATAGGCACTGTTCGTTTCACAATATTCCATGTGATCGATTCGAGGACTACTTATAAAATGTTATTGGGACGTCCATGGATACATGAAAATGGAATAGTAACCTCTACGCTTCATCAATGCTTCAAATTTTATAAACAGGGAATTTGGAAGGTTGATGCTGACTCTAGGCCATTTACAAAGGCTGAGTCTCACTTCGCTGATGCAAAATTTTATACAAAAAGTGAAGACGTGAGTGAAATCATATCAACTGAAGTTCCAGTGACTAAGGGCACTTTTAAGAACGAGCAAGAAATGATCACAAGCAAGAAAACAAATAAAGGGGATGCACTTAATAGTCAACAAAATGGTGAATTGACGACCGAAACTAAGTTAAGGGCGCCAGAGGCTGAAAAGATAGCAACCTTACAAAAGGAAGTCTCAAATCCCCCTGTTTTACGTTATATTCCTTTGTCTCGACGTAAGAAGGGAGAATCACCATTCGCAGAATGTTCGAAAAATCTGACGATAAAAAATACCGAGATATTAAAGGAAAATTTCACCACACCGCTTACCAAGATAGAGAAAGGAGAAGCGAAAAAAATTGAGAAAAAAGACTTAGAAGCATACCTTCCAGAAAGACGAACAGTGGAGGGATTCGACCCAAAGGCATATAAGTTGATGGCAAAGGCGGGTTATGACTTTACAACTCGTACTGAGCTTAAAAGCGTGAAAATATTTGACGAAAGGCCTGAGCTTTCCCCTACTCAAAAGAAGCTTCAAAAACAAGGATATTCTATACCTAATTCCAGAGCTGGAATTGGATATCAGCTAAACACAAATGCAAAGAAAGTACAATCTATAAGCCCAACTCCGACCACAAGAAAATCTGCCTTCAAAAGGTTAAGCGTGTCAGTAACAAGAGACCAAAAGAAAGCCTCCATATCCGTCTCAAACAAATCTAGCCTAGTGACAGAAGAGGAGGAAATTCGTAGTGCATTTCCATCAAGAATGAAAAGAAAGATGTTCACATCCGATCATGATATATTTGAAGAGGATGCCGAAGCGGCTCCGTTATTACTTGAGGATGGGGGTCAATCAACGATTGACGAGTTAAAAGAAGTCAATCTTAGTACGAAAGAAGAACCTCGTCCAACCTTCATAAGCACCCAACTTTCTGACAATGATGAAAATGAGTATGTAAACTTACTCAAAGCATATAAAGATGTCTTTGCATGGTCATATAAGGAAATTCCTGGACTCGATCCAAAGGTGGCCGTTCATCGCTTAGCGATCAAACCAGAGCATCGGCCAGTCAAGCAAGCCCAACGATGA

Protein sequence

MNQLGISVEELSNSKLLIQGFNQGAQRAIGTVRFTIFHVIDSRTTYKMLLGRPWIHENGIVTSTLHQCFKFYKQGIWKVDADSRPFTKAESHFADAKFYTKSEDVSEIISTEVPVTKGTFKNEQEMITSKKTNKGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNPPVLRYIPLSRRKKGESPFAECSKNLTIKNTEILKENFTTPLTKIEKGEAKKIEKKDLEAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNSRAGIGYQLNTNAKKVQSISPTPTTRKSAFKRLSVSVTRDQKKASISVSNKSSLVTEEEEIRSAFPSRMKRKMFTSDHDIFEEDAEAAPLLLEDGGQSTIDELKEVNLSTKEEPRPTFISTQLSDNDENEYVNLLKAYKDVFAWSYKEIPGLDPKVAVHRLAIKPEHRPVKQAQR

Homology

[Close]

BLAST of Pay0013339.1 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 802.7 bits (2072), Expect = 7.8e-229
Identity = 447/599 (74.62%), Postives = 457/599 (76.29%), Query Frame = 0


Query: 1    MNQLGISVEELSNSKLLIQGFNQGAQRAIGTVRF----------TIFHVIDSRTTYKMLL 60
            MNQLGISVEELSNSKL+IQGFNQGAQRAIGTVR           TIFHVIDSRTTYKMLL
Sbjct: 771  MNQLGISVEELSNSKLVIQGFNQGAQRAIGTVRLEVVIGDLQASTIFHVIDSRTTYKMLL 830

Query: 61   GRPWIHENGIVTSTLHQCFKFYKQGIWKVDADSRPFTKAESHFADAKFYTKSEDVSEIIS 120
            GRPWIHENGIVTSTLHQCFKFYKQGI KVDADSRPFTKAESHFADAKFYTKSEDVSEIIS
Sbjct: 831  GRPWIHENGIVTSTLHQCFKFYKQGIKKVDADSRPFTKAESHFADAKFYTKSEDVSEIIS 890

Query: 121  TEVPVTKGTFKNEQEMITSKKTNKGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNP 180
            TEVPVTKGTFKNEQEMITSKK++KGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNP
Sbjct: 891  TEVPVTKGTFKNEQEMITSKKSSKGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNP 950

Query: 181  PVLRYIPLSRRKKGESPFAECSKNLTIKNTEILKENFTTPLTKIEKGEAKKIEKKDLEAY 240
            PVLRYIPLSRRKKGESPF ECSKNLT+KNTEILKENFT PLTKIEKGEAKKIEKKDL+AY
Sbjct: 951  PVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEAKKIEKKDLQAY 1010

Query: 241  LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS 300
            LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS
Sbjct: 1011 LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS 1070

Query: 301  RAGIGYQ----------------------------------------------------- 360
            RAGIGYQ                                                     
Sbjct: 1071 RAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKKVRSQRSSVFDRIAFSAIRP 1130

Query: 361  ------------------------------LNTNAKKVQSISPTPTTRKSAFKRLSVSVT 420
                                          LNT+AKKV+SISPTPTTRKSAFKRLSVSVT
Sbjct: 1131 SVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRKSAFKRLSVSVT 1190

Query: 421  RDQKKASISVSNKSSLVTEEEEIRSAFPSRMKRKMF------------------------ 465
            RDQKKAS+SVSNKSSLVT +EEIRSAFPSRMKRKMF                        
Sbjct: 1191 RDQKKASMSVSNKSSLVTGDEEIRSAFPSRMKRKMFVSVNTEGSLKVKRHDVVFTRPEDN 1250

[Close]

BLAST of Pay0013339.1 vs. ExPASy TrEMBL
Match: A0A5D3BIH8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G001270 PE=4 SV=1)

HSP 1 Score: 802.7 bits (2072), Expect = 7.8e-229
Identity = 447/599 (74.62%), Postives = 457/599 (76.29%), Query Frame = 0


Query: 1    MNQLGISVEELSNSKLLIQGFNQGAQRAIGTVRF----------TIFHVIDSRTTYKMLL 60
            MNQLGISVEELSNSKL+IQGFNQGAQRAIGTVR           TIFHVIDSRTTYKMLL
Sbjct: 749  MNQLGISVEELSNSKLVIQGFNQGAQRAIGTVRLEVVIGDLQASTIFHVIDSRTTYKMLL 808

Query: 61   GRPWIHENGIVTSTLHQCFKFYKQGIWKVDADSRPFTKAESHFADAKFYTKSEDVSEIIS 120
            GRPWIHENGIVTSTLHQCFKFYKQGI KVDADSRPFTKAESHFADAKFYTKSEDVSEIIS
Sbjct: 809  GRPWIHENGIVTSTLHQCFKFYKQGIKKVDADSRPFTKAESHFADAKFYTKSEDVSEIIS 868

Query: 121  TEVPVTKGTFKNEQEMITSKKTNKGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNP 180
            TEVPVTKGTFKNEQEMITSKK++KGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNP
Sbjct: 869  TEVPVTKGTFKNEQEMITSKKSSKGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNP 928

Query: 181  PVLRYIPLSRRKKGESPFAECSKNLTIKNTEILKENFTTPLTKIEKGEAKKIEKKDLEAY 240
            PVLRYIPLSRRKKGESPF ECSKNLT+KNTEILKENFT PLTKIEKGEAKKIEKKDL+AY
Sbjct: 929  PVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEAKKIEKKDLQAY 988

Query: 241  LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS 300
            LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS
Sbjct: 989  LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS 1048

Query: 301  RAGIGYQ----------------------------------------------------- 360
            RAGIGYQ                                                     
Sbjct: 1049 RAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKKVRSQRSSVFDRIAFSAIRP 1108

Query: 361  ------------------------------LNTNAKKVQSISPTPTTRKSAFKRLSVSVT 420
                                          LNT+AKKV+SISPTPTTRKSAFKRLSVSVT
Sbjct: 1109 SVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRKSAFKRLSVSVT 1168

Query: 421  RDQKKASISVSNKSSLVTEEEEIRSAFPSRMKRKMF------------------------ 465
            RDQKKAS+SVSNKSSLVT +EEIRSAFPSRMKRKMF                        
Sbjct: 1169 RDQKKASMSVSNKSSLVTGDEEIRSAFPSRMKRKMFVSVNTEGSLKVKRHDVVFTRPEDN 1228

[Close]

BLAST of Pay0013339.1 vs. ExPASy TrEMBL
Match: A0A5D3D1E5 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G004020 PE=4 SV=1)

HSP 1 Score: 802.7 bits (2072), Expect = 7.8e-229
Identity = 447/599 (74.62%), Postives = 457/599 (76.29%), Query Frame = 0


Query: 1    MNQLGISVEELSNSKLLIQGFNQGAQRAIGTVRF----------TIFHVIDSRTTYKMLL 60
            MNQLGISVEELSNSKL+IQGFNQGAQRAIGTVR           TIFHVIDSRTTYKMLL
Sbjct: 701  MNQLGISVEELSNSKLVIQGFNQGAQRAIGTVRLEVVIGDLQASTIFHVIDSRTTYKMLL 760

Query: 61   GRPWIHENGIVTSTLHQCFKFYKQGIWKVDADSRPFTKAESHFADAKFYTKSEDVSEIIS 120
            GRPWIHENGIVTSTLHQCFKFYKQGI KVDADSRPFTKAESHFADAKFYTKSEDVSEIIS
Sbjct: 761  GRPWIHENGIVTSTLHQCFKFYKQGIKKVDADSRPFTKAESHFADAKFYTKSEDVSEIIS 820

Query: 121  TEVPVTKGTFKNEQEMITSKKTNKGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNP 180
            TEVPVTKGTFKNEQEMITSKK++KGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNP
Sbjct: 821  TEVPVTKGTFKNEQEMITSKKSSKGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNP 880

Query: 181  PVLRYIPLSRRKKGESPFAECSKNLTIKNTEILKENFTTPLTKIEKGEAKKIEKKDLEAY 240
            PVLRYIPLSRRKKGESPF ECSKNLT+KNTEILKENFT PLTKIEKGEAKKIEKKDL+AY
Sbjct: 881  PVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEAKKIEKKDLQAY 940

Query: 241  LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS 300
            LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS
Sbjct: 941  LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS 1000

Query: 301  RAGIGYQ----------------------------------------------------- 360
            RAGIGYQ                                                     
Sbjct: 1001 RAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKKVRSQRSSVFDRIAFSAIRP 1060

Query: 361  ------------------------------LNTNAKKVQSISPTPTTRKSAFKRLSVSVT 420
                                          LNT+AKKV+SISPTPTTRKSAFKRLSVSVT
Sbjct: 1061 SVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRKSAFKRLSVSVT 1120

Query: 421  RDQKKASISVSNKSSLVTEEEEIRSAFPSRMKRKMF------------------------ 465
            RDQKKAS+SVSNKSSLVT +EEIRSAFPSRMKRKMF                        
Sbjct: 1121 RDQKKASMSVSNKSSLVTGDEEIRSAFPSRMKRKMFVSVNTEGSLKVKRHDVVFTRPEDN 1180

[Close]

BLAST of Pay0013339.1 vs. ExPASy TrEMBL
Match: A0A5A7UQP2 (Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold438G00090 PE=4 SV=1)

HSP 1 Score: 785.8 bits (2028), Expect = 9.9e-224
Identity = 442/599 (73.79%), Postives = 449/599 (74.96%), Query Frame = 0


Query: 1   MNQLGISVEELSNSKLLIQGFNQGAQRAIGTVRF----------TIFHVIDSRTTYKMLL 60
           MNQLGISVEELSNSKL+IQGFNQGAQRAIGTVR           TIFHVIDSRTTYKMLL
Sbjct: 248 MNQLGISVEELSNSKLVIQGFNQGAQRAIGTVRLEIVIGDLKVSTIFHVIDSRTTYKMLL 307

Query: 61  GRPWIHENGIVTSTLHQCFKFYKQGIWKVDADSRPFTKAESHFADAKFYTKSEDVSEIIS 120
           GRPWIHENGIVTSTLHQCFKF+KQGI KVDADSRPFTKAESHFADAKFYTKSEDVSEIIS
Sbjct: 308 GRPWIHENGIVTSTLHQCFKFHKQGIRKVDADSRPFTKAESHFADAKFYTKSEDVSEIIS 367

Query: 121 TEVPVTKGTFKNEQEMITSKKTNKGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNP 180
           TEVPVTKGTFKNEQEMITSKK+NKGDALNSQQNGE TTETKLRAPEAEKIATLQKEVSN 
Sbjct: 368 TEVPVTKGTFKNEQEMITSKKSNKGDALNSQQNGESTTETKLRAPEAEKIATLQKEVSNL 427

Query: 181 PVLRYIPLSRRKKGESPFAECSKNLTIKNTEILKENFTTPLTKIEKGEAKKIEKKDLEAY 240
           PVL YI  SR KKGESPFAECSKNLT+KNTEILKENFT PLTKIEKGEAKKIEKKDLEAY
Sbjct: 428 PVLCYISFSRHKKGESPFAECSKNLTVKNTEILKENFTAPLTKIEKGEAKKIEKKDLEAY 487

Query: 241 LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS 300
           LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS
Sbjct: 488 LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS 547

Query: 301 RAGIGYQ----------------------------------------------------- 360
           RAGIGYQ                                                     
Sbjct: 548 RAGIGYQSSEPVRITGKRKVKVANTCHITVEESKDSEEGKNDRSQRSSVFDRIAFSAIRP 607

Query: 361 ------------------------------LNTNAKKVQSISPTPTTRKSAFKRLSVSVT 420
                                         LNTNAKKVQSISPTPTTRKSAFKRLSVSVT
Sbjct: 608 SVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTNAKKVQSISPTPTTRKSAFKRLSVSVT 667

Query: 421 RDQKKASISVSNKSSLVTEEEEIRSAFPSRMKRKMF------------------------ 465
           R QKKASISV NKSSLVTE+EEIRSAFPSRMKRKM                         
Sbjct: 668 RGQKKASISVLNKSSLVTEDEEIRSAFPSRMKRKMSVSVNTEGSLKVKRHDVVFTRPEDN 727

[Close]

BLAST of Pay0013339.1 vs. ExPASy TrEMBL
Match: A0A5A7U2B8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00950 PE=4 SV=1)

HSP 1 Score: 781.6 bits (2017), Expect = 1.9e-222
Identity = 432/554 (77.98%), Postives = 445/554 (80.32%), Query Frame = 0


Query: 1   MNQLGISVEELSNSKLLIQGFNQGAQRAIGTVRF--------TIFHVIDSRTTYKMLLGR 60
           MNQLGISVEELSNSKL+IQGFNQGAQ AI    +        TIFHVIDSRTTYKMLLGR
Sbjct: 125 MNQLGISVEELSNSKLVIQGFNQGAQWAIALFVWRSSYLQASTIFHVIDSRTTYKMLLGR 184

Query: 61  PWIHENGIVTSTLHQCFKFYKQGIWKVDADSRPFTKAESHFADAKFYTKSEDVSEIISTE 120
           PWIHENGIVTSTLHQCFKFYKQGI KVDADSRPFTKA+SHFADAKFYTKSE+VSEIISTE
Sbjct: 185 PWIHENGIVTSTLHQCFKFYKQGIRKVDADSRPFTKAKSHFADAKFYTKSENVSEIISTE 244

Query: 121 VPVTKGTFKNEQEMITSKKTNKGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNPPV 180
           VPV K TFKNEQEMITSKK+NKG+ALNSQQNGE TTETKLRAPEAEKIATLQKEVSN PV
Sbjct: 245 VPVIKDTFKNEQEMITSKKSNKGNALNSQQNGESTTETKLRAPEAEKIATLQKEVSNSPV 304

Query: 181 LRYIPLSRRKKGESPFAECSKNLTIKNTEILKENFTTPLTKIEKGEAKKIEKKDLEAYLP 240
           LRYIPLSRRKKGESPFAECSKNLT+KNTEILKENFT  LTKIEKGEAKKI+KKDLEAYLP
Sbjct: 305 LRYIPLSRRKKGESPFAECSKNLTVKNTEILKENFTASLTKIEKGEAKKIKKKDLEAYLP 364

Query: 241 ERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNSRA 300
           ERRTVEGFDPKAYKLMAKAGYD TTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNSRA
Sbjct: 365 ERRTVEGFDPKAYKLMAKAGYDSTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNSRA 424

Query: 301 GIGYQ----------------------------------------LNTNAKKVQSISPTP 360
           GIGYQ                                        LNTNAKKVQSISPTP
Sbjct: 425 GIGYQSSEPVRITDKGKIKRVSTSIAKDNNQVSTCSSTRLSAFQRLNTNAKKVQSISPTP 484

Query: 361 TTRKSAFKRLSVSVTRDQKKASISVSNKSSLVTEEEEIRSAFPSRMKRKMF--------- 420
           TTRKSAFKRLSVSVTR QKKASISVSNKSSLVT +EEIRSAFPSRMKRKMF         
Sbjct: 485 TTRKSAFKRLSVSVTRGQKKASISVSNKSSLVTGDEEIRSAFPSRMKRKMFVSVNTEGSL 544

Query: 421 ---------------------------------TSDHDIFEEDAEAAPLLLEDGGQSTID 465
                                            TS+HDIFEEDAEAAPL LEDGGQSTID
Sbjct: 545 KVMRHDVVFTRPEDNEPEDEVDVVGCCHVTIEETSEHDIFEEDAEAAPLSLEDGGQSTID 604

[Close]

BLAST of Pay0013339.1 vs. NCBI nr
Match: TYJ98225.1 (uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa])

HSP 1 Score: 802.7 bits (2072), Expect = 1.6e-228
Identity = 447/599 (74.62%), Postives = 457/599 (76.29%), Query Frame = 0


Query: 1    MNQLGISVEELSNSKLLIQGFNQGAQRAIGTVRF----------TIFHVIDSRTTYKMLL 60
            MNQLGISVEELSNSKL+IQGFNQGAQRAIGTVR           TIFHVIDSRTTYKMLL
Sbjct: 749  MNQLGISVEELSNSKLVIQGFNQGAQRAIGTVRLEVVIGDLQASTIFHVIDSRTTYKMLL 808

Query: 61   GRPWIHENGIVTSTLHQCFKFYKQGIWKVDADSRPFTKAESHFADAKFYTKSEDVSEIIS 120
            GRPWIHENGIVTSTLHQCFKFYKQGI KVDADSRPFTKAESHFADAKFYTKSEDVSEIIS
Sbjct: 809  GRPWIHENGIVTSTLHQCFKFYKQGIKKVDADSRPFTKAESHFADAKFYTKSEDVSEIIS 868

Query: 121  TEVPVTKGTFKNEQEMITSKKTNKGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNP 180
            TEVPVTKGTFKNEQEMITSKK++KGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNP
Sbjct: 869  TEVPVTKGTFKNEQEMITSKKSSKGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNP 928

Query: 181  PVLRYIPLSRRKKGESPFAECSKNLTIKNTEILKENFTTPLTKIEKGEAKKIEKKDLEAY 240
            PVLRYIPLSRRKKGESPF ECSKNLT+KNTEILKENFT PLTKIEKGEAKKIEKKDL+AY
Sbjct: 929  PVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEAKKIEKKDLQAY 988

Query: 241  LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS 300
            LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS
Sbjct: 989  LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS 1048

Query: 301  RAGIGYQ----------------------------------------------------- 360
            RAGIGYQ                                                     
Sbjct: 1049 RAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKKVRSQRSSVFDRIAFSAIRP 1108

Query: 361  ------------------------------LNTNAKKVQSISPTPTTRKSAFKRLSVSVT 420
                                          LNT+AKKV+SISPTPTTRKSAFKRLSVSVT
Sbjct: 1109 SVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRKSAFKRLSVSVT 1168

Query: 421  RDQKKASISVSNKSSLVTEEEEIRSAFPSRMKRKMF------------------------ 465
            RDQKKAS+SVSNKSSLVT +EEIRSAFPSRMKRKMF                        
Sbjct: 1169 RDQKKASMSVSNKSSLVTGDEEIRSAFPSRMKRKMFVSVNTEGSLKVKRHDVVFTRPEDN 1228

[Close]

BLAST of Pay0013339.1 vs. NCBI nr
Match: KAA0047477.1 (uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 802.7 bits (2072), Expect = 1.6e-228
Identity = 447/599 (74.62%), Postives = 457/599 (76.29%), Query Frame = 0


Query: 1    MNQLGISVEELSNSKLLIQGFNQGAQRAIGTVRF----------TIFHVIDSRTTYKMLL 60
            MNQLGISVEELSNSKL+IQGFNQGAQRAIGTVR           TIFHVIDSRTTYKMLL
Sbjct: 771  MNQLGISVEELSNSKLVIQGFNQGAQRAIGTVRLEVVIGDLQASTIFHVIDSRTTYKMLL 830

Query: 61   GRPWIHENGIVTSTLHQCFKFYKQGIWKVDADSRPFTKAESHFADAKFYTKSEDVSEIIS 120
            GRPWIHENGIVTSTLHQCFKFYKQGI KVDADSRPFTKAESHFADAKFYTKSEDVSEIIS
Sbjct: 831  GRPWIHENGIVTSTLHQCFKFYKQGIKKVDADSRPFTKAESHFADAKFYTKSEDVSEIIS 890

Query: 121  TEVPVTKGTFKNEQEMITSKKTNKGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNP 180
            TEVPVTKGTFKNEQEMITSKK++KGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNP
Sbjct: 891  TEVPVTKGTFKNEQEMITSKKSSKGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNP 950

Query: 181  PVLRYIPLSRRKKGESPFAECSKNLTIKNTEILKENFTTPLTKIEKGEAKKIEKKDLEAY 240
            PVLRYIPLSRRKKGESPF ECSKNLT+KNTEILKENFT PLTKIEKGEAKKIEKKDL+AY
Sbjct: 951  PVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEAKKIEKKDLQAY 1010

Query: 241  LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS 300
            LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS
Sbjct: 1011 LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS 1070

Query: 301  RAGIGYQ----------------------------------------------------- 360
            RAGIGYQ                                                     
Sbjct: 1071 RAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKKVRSQRSSVFDRIAFSAIRP 1130

Query: 361  ------------------------------LNTNAKKVQSISPTPTTRKSAFKRLSVSVT 420
                                          LNT+AKKV+SISPTPTTRKSAFKRLSVSVT
Sbjct: 1131 SVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRKSAFKRLSVSVT 1190

Query: 421  RDQKKASISVSNKSSLVTEEEEIRSAFPSRMKRKMF------------------------ 465
            RDQKKAS+SVSNKSSLVT +EEIRSAFPSRMKRKMF                        
Sbjct: 1191 RDQKKASMSVSNKSSLVTGDEEIRSAFPSRMKRKMFVSVNTEGSLKVKRHDVVFTRPEDN 1250

[Close]

BLAST of Pay0013339.1 vs. NCBI nr
Match: TYK18071.1 (uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa])

HSP 1 Score: 802.7 bits (2072), Expect = 1.6e-228
Identity = 447/599 (74.62%), Postives = 457/599 (76.29%), Query Frame = 0


Query: 1    MNQLGISVEELSNSKLLIQGFNQGAQRAIGTVRF----------TIFHVIDSRTTYKMLL 60
            MNQLGISVEELSNSKL+IQGFNQGAQRAIGTVR           TIFHVIDSRTTYKMLL
Sbjct: 701  MNQLGISVEELSNSKLVIQGFNQGAQRAIGTVRLEVVIGDLQASTIFHVIDSRTTYKMLL 760

Query: 61   GRPWIHENGIVTSTLHQCFKFYKQGIWKVDADSRPFTKAESHFADAKFYTKSEDVSEIIS 120
            GRPWIHENGIVTSTLHQCFKFYKQGI KVDADSRPFTKAESHFADAKFYTKSEDVSEIIS
Sbjct: 761  GRPWIHENGIVTSTLHQCFKFYKQGIKKVDADSRPFTKAESHFADAKFYTKSEDVSEIIS 820

Query: 121  TEVPVTKGTFKNEQEMITSKKTNKGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNP 180
            TEVPVTKGTFKNEQEMITSKK++KGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNP
Sbjct: 821  TEVPVTKGTFKNEQEMITSKKSSKGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNP 880

Query: 181  PVLRYIPLSRRKKGESPFAECSKNLTIKNTEILKENFTTPLTKIEKGEAKKIEKKDLEAY 240
            PVLRYIPLSRRKKGESPF ECSKNLT+KNTEILKENFT PLTKIEKGEAKKIEKKDL+AY
Sbjct: 881  PVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEAKKIEKKDLQAY 940

Query: 241  LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS 300
            LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS
Sbjct: 941  LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS 1000

Query: 301  RAGIGYQ----------------------------------------------------- 360
            RAGIGYQ                                                     
Sbjct: 1001 RAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKKVRSQRSSVFDRIAFSAIRP 1060

Query: 361  ------------------------------LNTNAKKVQSISPTPTTRKSAFKRLSVSVT 420
                                          LNT+AKKV+SISPTPTTRKSAFKRLSVSVT
Sbjct: 1061 SVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRKSAFKRLSVSVT 1120

Query: 421  RDQKKASISVSNKSSLVTEEEEIRSAFPSRMKRKMF------------------------ 465
            RDQKKAS+SVSNKSSLVT +EEIRSAFPSRMKRKMF                        
Sbjct: 1121 RDQKKASMSVSNKSSLVTGDEEIRSAFPSRMKRKMFVSVNTEGSLKVKRHDVVFTRPEDN 1180

[Close]

BLAST of Pay0013339.1 vs. NCBI nr
Match: KAA0055891.1 (uncharacterized protein E6C27_scaffold438G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 785.8 bits (2028), Expect = 2.0e-223
Identity = 442/599 (73.79%), Postives = 449/599 (74.96%), Query Frame = 0


Query: 1   MNQLGISVEELSNSKLLIQGFNQGAQRAIGTVRF----------TIFHVIDSRTTYKMLL 60
           MNQLGISVEELSNSKL+IQGFNQGAQRAIGTVR           TIFHVIDSRTTYKMLL
Sbjct: 248 MNQLGISVEELSNSKLVIQGFNQGAQRAIGTVRLEIVIGDLKVSTIFHVIDSRTTYKMLL 307

Query: 61  GRPWIHENGIVTSTLHQCFKFYKQGIWKVDADSRPFTKAESHFADAKFYTKSEDVSEIIS 120
           GRPWIHENGIVTSTLHQCFKF+KQGI KVDADSRPFTKAESHFADAKFYTKSEDVSEIIS
Sbjct: 308 GRPWIHENGIVTSTLHQCFKFHKQGIRKVDADSRPFTKAESHFADAKFYTKSEDVSEIIS 367

Query: 121 TEVPVTKGTFKNEQEMITSKKTNKGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNP 180
           TEVPVTKGTFKNEQEMITSKK+NKGDALNSQQNGE TTETKLRAPEAEKIATLQKEVSN 
Sbjct: 368 TEVPVTKGTFKNEQEMITSKKSNKGDALNSQQNGESTTETKLRAPEAEKIATLQKEVSNL 427

Query: 181 PVLRYIPLSRRKKGESPFAECSKNLTIKNTEILKENFTTPLTKIEKGEAKKIEKKDLEAY 240
           PVL YI  SR KKGESPFAECSKNLT+KNTEILKENFT PLTKIEKGEAKKIEKKDLEAY
Sbjct: 428 PVLCYISFSRHKKGESPFAECSKNLTVKNTEILKENFTAPLTKIEKGEAKKIEKKDLEAY 487

Query: 241 LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS 300
           LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS
Sbjct: 488 LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS 547

Query: 301 RAGIGYQ----------------------------------------------------- 360
           RAGIGYQ                                                     
Sbjct: 548 RAGIGYQSSEPVRITGKRKVKVANTCHITVEESKDSEEGKNDRSQRSSVFDRIAFSAIRP 607

Query: 361 ------------------------------LNTNAKKVQSISPTPTTRKSAFKRLSVSVT 420
                                         LNTNAKKVQSISPTPTTRKSAFKRLSVSVT
Sbjct: 608 SVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTNAKKVQSISPTPTTRKSAFKRLSVSVT 667

Query: 421 RDQKKASISVSNKSSLVTEEEEIRSAFPSRMKRKMF------------------------ 465
           R QKKASISV NKSSLVTE+EEIRSAFPSRMKRKM                         
Sbjct: 668 RGQKKASISVLNKSSLVTEDEEIRSAFPSRMKRKMSVSVNTEGSLKVKRHDVVFTRPEDN 727

[Close]

BLAST of Pay0013339.1 vs. NCBI nr
Match: TYK02262.1 (uncharacterized protein E5676_scaffold18G00630 [Cucumis melo var. makuwa])

HSP 1 Score: 781.6 bits (2017), Expect = 3.9e-222
Identity = 438/599 (73.12%), Postives = 450/599 (75.13%), Query Frame = 0


Query: 1   MNQLGISVEELSNSKLLIQGFNQGAQRAIGTVRF----------TIFHVIDSRTTYKMLL 60
           MNQLGISVE+LSNSKL+IQGFNQGAQ+AIGTVR           TIFHVIDSRTTYKMLL
Sbjct: 125 MNQLGISVEDLSNSKLVIQGFNQGAQQAIGTVRLEVVIGDLQASTIFHVIDSRTTYKMLL 184

Query: 61  GRPWIHENGIVTSTLHQCFKFYKQGIWKVDADSRPFTKAESHFADAKFYTKSEDVSEIIS 120
           GRPWIHENGIVTSTLHQCFKFYKQGI KVDADSRPFTKAE HFADAKFYTKSEDVSEIIS
Sbjct: 185 GRPWIHENGIVTSTLHQCFKFYKQGIRKVDADSRPFTKAEFHFADAKFYTKSEDVSEIIS 244

Query: 121 TEVPVTKGTFKNEQEMITSKKTNKGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNP 180
           TEVPVTKGTFKNEQEMITSKK+NKG+ LNSQQNGE TTETKLRAPEAEKIATLQKEVSNP
Sbjct: 245 TEVPVTKGTFKNEQEMITSKKSNKGNTLNSQQNGESTTETKLRAPEAEKIATLQKEVSNP 304

Query: 181 PVLRYIPLSRRKKGESPFAECSKNLTIKNTEILKENFTTPLTKIEKGEAKKIEKKDLEAY 240
           PVLRYIPLSRRKKGESPFAECSKN T+KNTEILKENFT PLTKIEKGEAKKIEKK+LEAY
Sbjct: 305 PVLRYIPLSRRKKGESPFAECSKNPTVKNTEILKENFTPPLTKIEKGEAKKIEKKELEAY 364

Query: 241 LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS 300
           LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS
Sbjct: 365 LPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSIPNS 424

Query: 301 RAGIGYQ----------------------------------------------------- 360
           RAGIGYQ                                                     
Sbjct: 425 RAGIGYQSSEPIRITGKGKAKVTNTCHITVEESKDSKEGKKDRSQRSSVFDRIAFSAIRP 484

Query: 361 ------------------------------LNTNAKKVQSISPTPTTRKSAFKRLSVSVT 420
                                         LNTNAKKVQSISPT TTRKSAFKRLSV VT
Sbjct: 485 SVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTNAKKVQSISPTSTTRKSAFKRLSVLVT 544

Query: 421 RDQKKASISVSNKSSLVTEEEEIRSAFPSRMKRKMF------------------------ 465
           + QKKASISVSNKSSLVT +EEIRSAFPSRMKRKMF                        
Sbjct: 545 KGQKKASISVSNKSSLVTGDEEIRSAFPSRMKRKMFVSVNTEGSLKVKRHDVVFTRPEDN 604

The following BLAST results are available for this feature:

BLAST of Pay0013339.1 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0013339.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZU9	7.8e-229	74.62	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940...	[more]
A0A5D3BIH8	7.8e-229	74.62	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3D1E5	7.8e-229	74.62	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00402...	[more]
A0A5A7UQP2	9.9e-224	73.79	Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7U2B8	1.9e-222	77.98	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold26...	[more]

BLAST of Pay0013339.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98225.1	1.6e-228	74.62	uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]	[more]
KAA0047477.1	1.6e-228	74.62	uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]	[more]
TYK18071.1	1.6e-228	74.62	uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]	[more]
KAA0055891.1	2.0e-223	73.79	uncharacterized protein E6C27_scaffold438G00090 [Cucumis melo var. makuwa]	[more]
TYK02262.1	3.9e-222	73.12	uncharacterized protein E5676_scaffold18G00630 [Cucumis melo var. makuwa]	[more]

BLAST of Pay0013339.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR24559:SF322	RNA-DIRECTED DNA POLYMERASE (REVERSE TRANSCRIPTASE), RIBONUCLEASE H-LIKE PROTEIN	coord: 24..74
None	No IPR available	PANTHER	PTHR24559:SF322	RNA-DIRECTED DNA POLYMERASE (REVERSE TRANSCRIPTASE), RIBONUCLEASE H-LIKE PROTEIN	coord: 393..461
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 24..74 coord: 393..461

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Pay0013339	Pay0013339	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0013339.1-cds	Pay0013339.1-cds-chr02:17370143..17370448	CDS
Pay0013339.1-cds	Pay0013339.1-cds-chr02:17370575..17370773	CDS
Pay0013339.1-cds	Pay0013339.1-cds-chr02:17371012..17371800	CDS
Pay0013339.1-cds	Pay0013339.1-cds-chr02:17371831..17371931	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0013339.1-exon	Pay0013339.1-exon-chr02:17370143..17370448	exon
Pay0013339.1-exon	Pay0013339.1-exon-chr02:17370575..17370773	exon
Pay0013339.1-exon	Pay0013339.1-exon-chr02:17371012..17371800	exon
Pay0013339.1-exon	Pay0013339.1-exon-chr02:17371831..17371931	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Pay0013339.1	Pay0013339.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006310	DNA recombination
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity