Pay0009924.1 (mRNA) Melon (Payzawat) v1

Overview


Name	Pay0009924.1
Type	mRNA
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	TPR_REGION domain-containing protein
Location	chr05: 2570929 .. 2572069 (-)
Sequence length	492
RNA-Seq Expression	Pay0009924.1
Synteny	Pay0009924.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCGGTGGTTTTGTTGATGGTAAATTCAATTGCAATGGCAATGGCAATGACAATGGTGGTGATGGTGGTTGTTTTGGTTCTTGGGATGGGGATCATACTGAAGAGGACATGGCAGAAATGCATTTTCAGAGAATGATAAAGACGAACCCGAAGGATTCGTTGTTACTAAGCAATTATGCTCAGTTCTTGAAGGAGGTACATTATATGAGAATTGAAATTACTATCTTCTTTAATTTGATTCAAACTTTTTAACTTTGACATTTGGTTCTGATCATTCATTTTATTCTTCTCTGTTAAATGGAGAATGGAAATCTTGTTGTCTCAAATAGAAGTTCTTGCAAAATCTTAGTTCTGATCCTTTACCACTGTCCATTCCTTTTCTAGGTGTTTGTATGGATCTTGATCTTGAGTGCCTGAACTGAATCTTTTCACAAATTGGGACTAAACCATTACAAAATTGGTTTTTCTATGAAGTTGCTACAAGAATGTAAAATGTCTTAAGGGGGAAAAGTTTGAACTATTGTTTTACTATTGAAAAAACTTGTGTGGTTAGTCGTAGAGTTTCATTCTCAAGCAATAATTTGTTGTTTTTATCTGCTGCTAATAAACAGGTTCGTGGAGATCTTATAAAAGCTGAAGAGTATTGTGGAAGAGCAATGTTAGCACGAGGCAATAATGGAAGTGTGATATCAATGTATGCCGAATTGATATGGAGTAATCATATGGATGCCTCCCGAGCTGAAAGTTACCATCTTCAAGCTACTAAAACTTCCCCTGATAATAGGTACGGAGAATGAGATATCCTGCTTTTTCATTAACTATATAAATCCAACACATAGCTTAATAATGTGAATAAAGAACACCAATTATCGAGCTTTTGTAGGAATCTGAAATTTTGATATACAAGGGAAAGAAAGAGAGCTCTTTCTCTCCCACACACATGCTAGCTAATTTTTGCTATAATTGGGACATTGGTAATTGATTTGTGGGGTTGTTTTGTTTGTTTAACTGGTGCAGTTTTGTTTTTGCTGCTTATGCACGGTTTCTTTGGGAAGTTGACAAAGAAGTACTCGACGGAGAAGCTCTAATGGACATCTTTGGTGGCAACCCATTCTCATCCCAGTCCTCCTCTAACTAA

mRNA sequence

ATGGTCGGTGGTTTTGTTGATGGTAAATTCAATTGCAATGGCAATGGCAATGACAATGGTGGTGATGGTGGTTGTTTTGGTTCTTGGGATGGGGATCATACTGAAGAGGACATGGCAGAAATGCATTTTCAGAGAATGATAAAGACGAACCCGAAGGATTCGTTGTTACTAAGCAATTATGCTCAGTTCTTGAAGGAGGTTCGTGGAGATCTTATAAAAGCTGAAGAGTATTGTGGAAGAGCAATGTTAGCACGAGGCAATAATGGAAGTGTGATATCAATGTATGCCGAATTGATATGGAGTAATCATATGGATGCCTCCCGAGCTGAAAGTTACCATCTTCAAGCTACTAAAACTTCCCCTGATAATAGTTTTGTTTTTGCTGCTTATGCACGGTTTCTTTGGGAAGTTGACAAAGAAGTACTCGACGGAGAAGCTCTAATGGACATCTTTGGTGGCAACCCATTCTCATCCCAGTCCTCCTCTAACTAA

Coding sequence (CDS)

ATGGTCGGTGGTTTTGTTGATGGTAAATTCAATTGCAATGGCAATGGCAATGACAATGGTGGTGATGGTGGTTGTTTTGGTTCTTGGGATGGGGATCATACTGAAGAGGACATGGCAGAAATGCATTTTCAGAGAATGATAAAGACGAACCCGAAGGATTCGTTGTTACTAAGCAATTATGCTCAGTTCTTGAAGGAGGTTCGTGGAGATCTTATAAAAGCTGAAGAGTATTGTGGAAGAGCAATGTTAGCACGAGGCAATAATGGAAGTGTGATATCAATGTATGCCGAATTGATATGGAGTAATCATATGGATGCCTCCCGAGCTGAAAGTTACCATCTTCAAGCTACTAAAACTTCCCCTGATAATAGTTTTGTTTTTGCTGCTTATGCACGGTTTCTTTGGGAAGTTGACAAAGAAGTACTCGACGGAGAAGCTCTAATGGACATCTTTGGTGGCAACCCATTCTCATCCCAGTCCTCCTCTAACTAA

Protein sequence

MVGGFVDGKFNCNGNGNDNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEVLDGEALMDIFGGNPFSSQSSSN

Homology

[Close]

BLAST of Pay0009924.1 vs. ExPASy TrEMBL
Match: A0A5D3BDH3 (Putative Tetratricopeptide repeat-like superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00320 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.2e-86
Identity = 163/165 (98.79%), Postives = 163/165 (98.79%), Query Frame = 0


Query: 1   MVGGFVDGKFNCNGNG--NDNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLS 60
           MVGGFVDGKFNCNGNG  NDNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLS
Sbjct: 80  MVGGFVDGKFNCNGNGNDNDNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLS 139

Query: 61  NYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATK 120
           NYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATK
Sbjct: 140 NYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATK 199

Query: 121 TSPDNSFVFAAYARFLWEVDKEVLDGEALMDIFGGNPFSSQSSSN 164
           TSPDNSFVFAAYARFLWEVDKEVLDGEALMDIFGGNPFSSQSSSN
Sbjct: 200 TSPDNSFVFAAYARFLWEVDKEVLDGEALMDIFGGNPFSSQSSSN 244

[Close]

BLAST of Pay0009924.1 vs. ExPASy TrEMBL
Match: A0A5A7V554 (EIN3-binding F-box protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001810 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 7.3e-73
Identity = 140/145 (96.55%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MVGGFVDGKFN---CNGNGNDNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLL 60
           MVGGFVDGKFN   CNGNGN NGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLL
Sbjct: 80  MVGGFVDGKFNRDSCNGNGNGNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLL 139

Query: 61  SNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQAT 120
           SNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQAT
Sbjct: 140 SNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQAT 199

Query: 121 KTSPDNSFVFAAYARFLWEVDKEVL 143
           KTSPDNSFVFAAYARFLWEVDKE L
Sbjct: 200 KTSPDNSFVFAAYARFLWEVDKECL 224

[Close]

BLAST of Pay0009924.1 vs. ExPASy TrEMBL
Match: A0A0A0LL02 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006810 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 5.8e-70
Identity = 142/158 (89.87%), Postives = 147/158 (93.04%), Query Frame = 0


Query: 1   MVGGFVDGKFNCNG-NGNDNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSN 60
           MVGGFVDGK N +G NGNDN G+GGCF SWDGD TEEDMAEMHFQRMIKTNPKDSLLLSN
Sbjct: 98  MVGGFVDGKVNRDGCNGNDN-GNGGCFVSWDGD-TEEDMAEMHFQRMIKTNPKDSLLLSN 157

Query: 61  YAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATKT 120
           YAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYA+LIWSN+MDASRAESYHLQATKT
Sbjct: 158 YAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYADLIWSNYMDASRAESYHLQATKT 217

Query: 121 SPDNSFVFAAYARFLWEVDKEVLDGEALMDIFGGNPFS 158
           SPDNSFVFAAYARFLWEV+KEV  GEA  D FGGNPFS
Sbjct: 218 SPDNSFVFAAYARFLWEVEKEVDKGEAETDSFGGNPFS 253

[Close]

BLAST of Pay0009924.1 vs. ExPASy TrEMBL
Match: A0A6J1KEK4 (uncharacterized protein LOC111493633 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493633 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.4e-44
Identity = 97/157 (61.78%), Postives = 121/157 (77.07%), Query Frame = 0


Query: 6   VDGKFNCNGN-GNDNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFL 65
           V G  +C G+ G  +GGD GCFGSWD D  E D A++++Q+MI+ NP++SLLLSNYA+FL
Sbjct: 92  VRGSSDCGGDGGGSDGGDDGCFGSWDADR-ENDWADLYYQKMIEANPENSLLLSNYARFL 151

Query: 66  KEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATKTSPDNS 125
            EVRGDL+KAEEYCGR++ A  N+G+VISMYA+LIW NH DASRAESYHLQA KTSPD+S
Sbjct: 152 MEVRGDLLKAEEYCGRSISANPNDGNVISMYADLIWKNHKDASRAESYHLQAAKTSPDDS 211

Query: 126 FVFAAYARFLWEVDKEVLDGEALMDIFG--GNPFSSQ 160
           FV A+YA+FLW+  +EV D     D F   G P SS+
Sbjct: 212 FVLASYAQFLWDAGEEVKDDNDEEDGFDSFGKPCSSR 247

[Close]

BLAST of Pay0009924.1 vs. ExPASy TrEMBL
Match: A0A6J1KGA4 (uncharacterized protein LOC111493633 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493633 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.9e-44
Identity = 100/165 (60.61%), Postives = 124/165 (75.15%), Query Frame = 0


Query: 1   MVGGFVDGKFNCNGNGND----NGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLL 60
           +VG  VDG    +G G D    +GGD GCFGSWD D  E D A++++Q+MI+ NP++SLL
Sbjct: 102 VVGVSVDGGIGRDGCGGDGGGSDGGDDGCFGSWDADR-ENDWADLYYQKMIEANPENSLL 161

Query: 61  LSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQA 120
           LSNYA+FL EVRGDL+KAEEYCGR++ A  N+G+VISMYA+LIW NH DASRAESYHLQA
Sbjct: 162 LSNYARFLMEVRGDLLKAEEYCGRSISANPNDGNVISMYADLIWKNHKDASRAESYHLQA 221

Query: 121 TKTSPDNSFVFAAYARFLWEVDKEVLDGEALMDIFG--GNPFSSQ 160
            KTSPD+SFV A+YA+FLW+  +EV D     D F   G P SS+
Sbjct: 222 AKTSPDDSFVLASYAQFLWDAGEEVKDDNDEEDGFDSFGKPCSSR 265

[Close]

BLAST of Pay0009924.1 vs. NCBI nr
Match: TYJ97822.1 (putative Tetratricopeptide repeat-like superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 328.9 bits (842), Expect = 2.4e-86
Identity = 163/165 (98.79%), Postives = 163/165 (98.79%), Query Frame = 0


Query: 1   MVGGFVDGKFNCNGNG--NDNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLS 60
           MVGGFVDGKFNCNGNG  NDNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLS
Sbjct: 80  MVGGFVDGKFNCNGNGNDNDNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLS 139

Query: 61  NYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATK 120
           NYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATK
Sbjct: 140 NYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATK 199

Query: 121 TSPDNSFVFAAYARFLWEVDKEVLDGEALMDIFGGNPFSSQSSSN 164
           TSPDNSFVFAAYARFLWEVDKEVLDGEALMDIFGGNPFSSQSSSN
Sbjct: 200 TSPDNSFVFAAYARFLWEVDKEVLDGEALMDIFGGNPFSSQSSSN 244

[Close]

BLAST of Pay0009924.1 vs. NCBI nr
Match: KAA0061616.1 (EIN3-binding F-box protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 283.1 bits (723), Expect = 1.5e-72
Identity = 140/145 (96.55%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MVGGFVDGKFN---CNGNGNDNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLL 60
           MVGGFVDGKFN   CNGNGN NGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLL
Sbjct: 80  MVGGFVDGKFNRDSCNGNGNGNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLL 139

Query: 61  SNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQAT 120
           SNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQAT
Sbjct: 140 SNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQAT 199

Query: 121 KTSPDNSFVFAAYARFLWEVDKEVL 143
           KTSPDNSFVFAAYARFLWEVDKE L
Sbjct: 200 KTSPDNSFVFAAYARFLWEVDKECL 224

[Close]

BLAST of Pay0009924.1 vs. NCBI nr
Match: XP_011648683.2 (uncharacterized protein LOC105434540 [Cucumis sativus] >KGN60686.1 hypothetical protein Csa_019377 [Cucumis sativus])

HSP 1 Score: 273.5 bits (698), Expect = 1.2e-69
Identity = 142/158 (89.87%), Postives = 147/158 (93.04%), Query Frame = 0


Query: 1   MVGGFVDGKFNCNG-NGNDNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSN 60
           MVGGFVDGK N +G NGNDN G+GGCF SWDGD TEEDMAEMHFQRMIKTNPKDSLLLSN
Sbjct: 98  MVGGFVDGKVNRDGCNGNDN-GNGGCFVSWDGD-TEEDMAEMHFQRMIKTNPKDSLLLSN 157

Query: 61  YAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATKT 120
           YAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYA+LIWSN+MDASRAESYHLQATKT
Sbjct: 158 YAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYADLIWSNYMDASRAESYHLQATKT 217

Query: 121 SPDNSFVFAAYARFLWEVDKEVLDGEALMDIFGGNPFS 158
           SPDNSFVFAAYARFLWEV+KEV  GEA  D FGGNPFS
Sbjct: 218 SPDNSFVFAAYARFLWEVEKEVDKGEAETDSFGGNPFS 253

[Close]

BLAST of Pay0009924.1 vs. NCBI nr
Match: KAG6599396.1 (hypothetical protein SDJN03_09174, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030381.1 hypothetical protein SDJN02_08728 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 194.5 bits (493), Expect = 7.1e-46
Identity = 103/167 (61.68%), Postives = 127/167 (76.05%), Query Frame = 0


Query: 1   MVGGFVDGKFNCNGNGND----NGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLL 60
           MVG  VDG   C+G G D    +GGD GCFGSWD D  E D A++++Q+MI+ NP++SLL
Sbjct: 102 MVGVSVDGGIGCDGCGGDGGGSDGGDDGCFGSWDADR-ENDWADLYYQKMIEANPENSLL 161

Query: 61  LSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQA 120
           LSNYA+FL EVRGDL+KAEEYCGR++ A  N+G+VIS+YA+LIW NH DASRAESYHLQA
Sbjct: 162 LSNYARFLMEVRGDLLKAEEYCGRSISANPNDGNVISIYADLIWKNHKDASRAESYHLQA 221

Query: 121 TKTSPDNSFVFAAYARFLWEVDKEVLDG----EALMDIFGGNPFSSQ 160
            KTSPD+SFV A+YARFLW+  +EV D     E   D F G P+SS+
Sbjct: 222 AKTSPDDSFVLASYARFLWDAGEEVEDDDDNEEDGFDSF-GEPYSSR 266

[Close]

BLAST of Pay0009924.1 vs. NCBI nr
Match: XP_023545630.1 (uncharacterized protein LOC111805006 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 190.7 bits (483), Expect = 1.0e-44
Identity = 103/169 (60.95%), Postives = 126/169 (74.56%), Query Frame = 0


Query: 1   MVGGFVDGKFNCNGNGND----NGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLL 60
           MVG  VDG    +G G D    +GGD GCFGSWD D  E D A++++Q+MI+ NP++SLL
Sbjct: 102 MVGVSVDGGIGRDGCGGDGGGSDGGDDGCFGSWDADR-ENDWADLYYQKMIEANPENSLL 161

Query: 61  LSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQA 120
           LSNYA+FL EVRGDL+KAEEYCGR++ A  N+G+VISMYA+LIW NH DASRAESYHLQA
Sbjct: 162 LSNYARFLMEVRGDLLKAEEYCGRSISANPNDGNVISMYADLIWKNHKDASRAESYHLQA 221

Query: 121 TKTSPDNSFVFAAYARFLWEVDKEVLDG------EALMDIFGGNPFSSQ 160
            KTSPD+SFV A+YARFLW+  +EV D       E   D F G P+SS+
Sbjct: 222 AKTSPDDSFVLASYARFLWDAGEEVEDDDDDDDKEDGFDSF-GEPYSSR 268

[Close]

BLAST of Pay0009924.1 vs. TAIR 10
Match: AT5G20190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 131.7 bits (330), Expect = 5.2e-31
Identity = 65/138 (47.10%), Postives = 93/138 (67.39%), Query Frame = 0


Query: 3   GGFVDGKFNCNGNGNDNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSNYAQ 62
           GG   G       G  +GGDGG           +D  ++H+++MI+ NP + + LSNYA+
Sbjct: 131 GGMFHGGGKGRSGGRSDGGDGG-----------DDNTDVHYRKMIEANPGNGIFLSNYAK 190

Query: 63  FLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATKTSPD 122
           FLKEVR D +KAEEYCGRA+L   N+G+V++MYAEL+W  H D+SRAE+Y  QA   +P+
Sbjct: 191 FLKEVRKDYLKAEEYCGRAILVSPNDGNVLAMYAELVWKIHKDSSRAENYFNQAVAAAPE 250

Query: 123 NSFVFAAYARFLWEVDKE 141
           + +V A+YARFLW+ ++E
Sbjct: 251 DCYVQASYARFLWDAEEE 257

[Close]

BLAST of Pay0009924.1 vs. TAIR 10
Match: AT1G80130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 131.0 bits (328), Expect = 9.0e-31
Identity = 69/132 (52.27%), Postives = 92/132 (69.70%), Query Frame = 0


Query: 16  GNDNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAE 75
           GN   G GG  GS       ED  + +++ MI +NP +SLL  NYA+FLKEV+GD+ KAE
Sbjct: 142 GNICNGGGGVGGSGVDGGRSEDATDTYYREMIDSNPGNSLLTGNYAKFLKEVKGDMKKAE 201

Query: 76  EYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLW 135
           EYC RA+L   N+G+V+S+YA+LI  NH D  RA SY+ QA K SP++ +V A+YARFLW
Sbjct: 202 EYCERAILGNTNDGNVLSLYADLILHNHQDRQRAHSYYKQAVKMSPEDCYVQASYARFLW 261

Query: 136 EVDKEVLDGEAL 148
           +VD++  D EAL
Sbjct: 262 DVDEDEED-EAL 272

[Close]

BLAST of Pay0009924.1 vs. TAIR 10
Match: AT4G32340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 126.3 bits (316), Expect = 2.2e-29
Identity = 71/144 (49.31%), Postives = 95/144 (65.97%), Query Frame = 0


Query: 4   GFVDGKFNCNGNGNDNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSNYAQF 63
           G  +G F   G     GG GG  GS DG          +++ MI+  P D+LLLSNYA+F
Sbjct: 85  GGSNGGFGGRGGDGAGGGGGGGGGSVDG----------YYEEMIQRYPGDTLLLSNYARF 144

Query: 64  LKEVRGDLIKAEEYCGRAMLAR-GNNGSVISMYAELIWSNHMDASRAESYHLQATKTSPD 123
           LKEV+GD  KAEEYC RAML+  G +G ++SMY +LIW NH D  RA+SY+ QA ++SPD
Sbjct: 145 LKEVKGDGRKAEEYCERAMLSESGRDGELLSMYGDLIWKNHGDGVRAQSYYDQAVQSSPD 204

Query: 124 NSFVFAAYARFLWEVDKEVLDGEA 147
           +  V A+YARFLW+ ++EV + E+
Sbjct: 205 DCNVLASYARFLWDAEEEVEEEES 218

[Close]

BLAST of Pay0009924.1 vs. TAIR 10
Match: AT4G17940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 2.9e-21
Identity = 53/136 (38.97%), Postives = 75/136 (55.15%), Query Frame = 0


Query: 10  FNCNGNGNDNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRG 69
           F   G G  +G  GG      G + ++     +++ M+++NP +SLLL NY +FL EV  
Sbjct: 121 FTGGGVGGGSGYSGGYGNGGGGGYEDKSKIGDYYREMLRSNPNNSLLLMNYGKFLYEVEK 180

Query: 70  DLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATKTSPDNSFVFAA 129
           D   AEEY GRA+L    +G  +SMY  LIW    D  RA+ Y  QA   SP++  V  +
Sbjct: 181 DAEGAEEYYGRAILENPGDGEALSMYGRLIWETKRDEKRAQGYFDQAVNASPNDCMVLGS 240

Query: 130 YARFLWEVDKEVLDGE 146
           YARF+WE + +  D E
Sbjct: 241 YARFMWEAEDDDDDDE 256

[Close]

BLAST of Pay0009924.1 vs. TAIR 10
Match: AT1G04530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 81.6 bits (200), Expect = 6.2e-16
Identity = 40/99 (40.40%), Postives = 62/99 (62.63%), Query Frame = 0


Query: 42  HFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWS 101
           +++ M++  P   LLL NYA+FL E +GDL  AEEY  +  +   ++G  ++ Y  L+  
Sbjct: 124 YYKGMLEEYPLHPLLLKNYAKFL-EYKGDLSGAEEYYHKCTVVEPSDGVALANYGRLVMK 183

Query: 102 NHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKE 141
            H D ++A SY  +A + SPD+S V AAYA FLWE++ +
Sbjct: 184 LHQDEAKAMSYFERAVQASPDDSIVLAAYASFLWEINAD 221

The following BLAST results are available for this feature:

BLAST of Pay0009924.1 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0009924.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BDH3	1.2e-86	98.79	Putative Tetratricopeptide repeat-like superfamily protein OS=Cucumis melo var. ...	[more]
A0A5A7V554	7.3e-73	96.55	EIN3-binding F-box protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A0A0LL02	5.8e-70	89.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006810 PE=4 SV=1	[more]
A0A6J1KEK4	1.4e-44	61.78	uncharacterized protein LOC111493633 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KGA4	1.9e-44	60.61	uncharacterized protein LOC111493633 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Pay0009924.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ97822.1	2.4e-86	98.79	putative Tetratricopeptide repeat-like superfamily protein [Cucumis melo var. ma...	[more]
KAA0061616.1	1.5e-72	96.55	EIN3-binding F-box protein 1 [Cucumis melo var. makuwa]	[more]
XP_011648683.2	1.2e-69	89.87	uncharacterized protein LOC105434540 [Cucumis sativus] >KGN60686.1 hypothetical ...	[more]
KAG6599396.1	7.1e-46	61.68	hypothetical protein SDJN03_09174, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023545630.1	1.0e-44	60.95	uncharacterized protein LOC111805006 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Pay0009924.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20190.1	5.2e-31	47.10	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G80130.1	9.0e-31	52.27	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G32340.1	2.2e-29	49.31	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G17940.1	2.9e-21	38.97	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G04530.1	6.2e-16	40.40	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 27..148 e-value: 4.1E-10 score: 41.3
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 37..138
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 10..140
None	No IPR available	PANTHER	PTHR26312:SF73	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN	coord: 10..140

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Pay0009924	Pay0009924	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0009924.1-cds	Pay0009924.1-cds-chr05:2570929..2571049	CDS
Pay0009924.1-cds	Pay0009924.1-cds-chr05:2571283..2571455	CDS
Pay0009924.1-cds	Pay0009924.1-cds-chr05:2571872..2572069	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0009924.1-exon	Pay0009924.1-exon-chr05:2570929..2571049	exon
Pay0009924.1-exon	Pay0009924.1-exon-chr05:2571283..2571455	exon
Pay0009924.1-exon	Pay0009924.1-exon-chr05:2571872..2572069	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Pay0009924.1	Pay0009924.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding