PI0029021.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0029021.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr09: 11179748 .. 11182047 (-)
Sequence length	780
RNA-Seq Expression	PI0029021.1
Synteny	PI0029021.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATGAGAGCCAAAACACAGGATGTAAGGTGGTATGAGGTAGATGCGCTGCGAAATGCAGAATGGGACATGCGAGGAGGACGCGGGATGATGCACGCGAGTTGGATGTGAGCTGCATTGGGTGAGGAGTTCGCATGCAAAAATATTTGAACTTCTTCTGAAATATTACCATTTTACCCCTCGATCTTTAATTTGCCCAATTTTCTTCGTTTGGGCTCTGTTTTAGGTGATTTTAATTGCGTTGGGTACGTATCGGAATCTAGTTTCATATTCTGCACAAAAATATTAAAATAGTGAATATATGAATGTTATGAATAGGGAATAAAGTATATTTAAAATGGTCAATAATTGCCCCAAGAATAATGATTCTTGCATATTAATCTTGAAGTGGATAATAATTTTGCTAAAGGTAGTGGCTATCCTCTCTTTAGCAAATCTTGAGTAGAATACAAATCTTGAATTGAATGTGTTTCGGTTGCTGAAATTAATCACTTTTTGTTTAAGATTGGACGATTTAATTGTAAAAATTCTATTCTTGTGTTTTCTTGAAAAGGTTAATTAATTTTCTTTTTCAATGATTAGAATCATATCAATTGCCCAAAAAGAATCCATTTACTAAAAATTGAGAGAAAACTTAATCTTGATTTCTTTTTGTTACCAATCCTCCATTGTTTCTTTCCTTTTGAAATTGCTACAAACCTTCCCTCTTTATATTTCTAATTCCTTTTAGATCTTGAAGTTACTAATCTTTTTGTTTGTGACTTTAAAGTGTTGAAATTCTAAAGTGCTCTCTTGGGTTCAACACCCTCTTCCATATACTACTCACATTATACAATTTGGTATCTCCAAACCCTTATCTTTTTTTATCTAGCTTTCTTAAATTCTTTTAAACTAGATAATTCTTTTTCTTGTATGCTTGTGATCTGCCACTTGGTTCTCAGTGTAACGACCGCAAGTTTGGGCTAAGCATTAAGGTAATTCTTCTCATCTAATTTGGTTAATTAAAAGAAAAAGAGTTGAATTTATTAAGGATGTATTTGAATTTTGAAGGAAATTTGACTAAAGTTGTGAAAATACCAACTTATTGGGTTTCAAGGGGTAATTTTGGTATTTTGGGCCTTAAAACCTTCTCCAGCCCTAAACCCCTCACTTTATTCTCTCTTCCTTGCGTGTAGTCTCCGAGCAGCCACCGTTTCTCCCCAGAAATCCTTCCGCCGCGCGTTGCCTCGCCGTCCAGAAGTTTTTCTCCGCCTGCTCGTACCGCCGGAAACCCTTGCCGCTTGCTTGGATGGCTTGGGTTGGTTCTTTTGCAAGGTGGTGCGATGTGAGGTCTCCTCGTGGTTATCTCGGTGTTCGTTGGTCCTCACTTCTGTAAGTGTTCTGAAAACTCTCCATCTAGCCAAGTTCCCTTTCGCGTTTTCGTTTGGTCTTTCCAGCTCCCCCGCGAAGTAACCCTTCTTCTTGGCAGTCCCCTTGTTCGCAAGCTGTGAAGCTCAGTCCGCGATCTAAGGTGTTAGTTCGCGAGCTTCCCTTGCCGCCAGCCGTGGTCCACGTTCGGTCTCGCGTTCCGTGGAGTTGCCTTTGTCCGCGAGCTGAGGAGTCTTGTCACGTTCTGAGTCCCTCTGCCTGCCTCTTCTTACAGCGAACTCCCTTGGTCTGCGAGGTAGGTCTTCATCCGTTGCAGTTTGGTTTGTTTCTTCTCCGAATTCTTGGGTCTAAGTCTTTTCACCTTATGTTTGGTCTTGCCGCGTAGAGTGTGGTCTCGCCAAGGAGTAAACGTTTGGAAGCTTGCCTTTCTCGCGTTTCAGACCCTTCCTTGCCGCGTGGTGCACTTGGACTAACGCATCCGAGGTAAGGGGTTTCTCTACCATTTAGCGAAATGAGAAACGCATTGGAGCATAAAATGTTCATAAGAGACCGTGATTAGAATTGAGGTTCCGTTATGTTGGGCTGATTGCTATGAATGAAATATCTCTATAAACTATGTTATGTACTTATCCTTGATTATGGACTGAATATCAACAAGCATGACTGATTGAGGCTCTGCCTCCTAATTGAGTATTTTGGGTAGTATGCGTGATATGTATTATACATGAAATGGGTGAACGGTTATCTTTAGCTATGTTAGTGTACCTGCATGCATGATGGGTGTTTCCTTCGGGATCACCAGACTGATGGGTGTTTCCTTCGGGATCACCAAACTGATAGGTGTTTCCTTCGAGATCACCAGACTGATGGTGCGACCCTCGGGCCACCAGACTGATGGGTGCTTCCTTCGGGATCACCAGACTGATTAG

mRNA sequence

ATGGAGATGAGAGCCAAAACACAGGATGTAAGGTGGTATGAGGTAGATGCGCTGCGAAATGCAGAATGGGACATGCGAGGAGGACGCGGGATGATGCACGCGAGTTGGATTCTCCGAGCAGCCACCGTTTCTCCCCAGAAATCCTTCCGCCGCGCGTTGCCTCGCCGTCCAGAAGTTTTTCTCCGCCTGCTCGTACCGCCGGAAACCCTTGCCGCTTGCTTGGATGGCTTGGGTTGGTTCTTTTGCAAGGTGGTGCGATGTGAGGTCTCCTCGTGGTTATCTCGGTCTCCCCCGCGAAGTAACCCTTCTTCTTGGCAGTCCCCTTGTTCGCAAGCTGTGAAGCTCAGTCCGCGATCTAAGGTGTTAGTTCGCGAGCTTCCCTTGCCGCCAGCCGTGGTCCACGTTCGGTCTCGCGTTCCGTGGAGTTGCCTTTGTCCGCGAGCTGAGGAGTCTTGTCACGTTCTGAGTCCCTCTGCCTGCCTCTTCTTACAGCGAACTCCCTTGGTCTGCGAGAGTGTGGTCTCGCCAAGGAGTAAACGTTTGGAAGCTTGCCTTTCTCGCGTTTCAGACCCTTCCTTGCCGCGTGGTGCACTTGGACTAACGCATCCGAGTGTACCTGCATGCATGATGGGTGTTTCCTTCGGGATCACCAGACTGATGGGTGTTTCCTTCGGGATCACCAAACTGATAGGTGTTTCCTTCGAGATCACCAGACTGATGGTGCGACCCTCGGGCCACCAGACTGATGGGTGCTTCCTTCGGGATCACCAGACTGATTAG

Coding sequence (CDS)

ATGGAGATGAGAGCCAAAACACAGGATGTAAGGTGGTATGAGGTAGATGCGCTGCGAAATGCAGAATGGGACATGCGAGGAGGACGCGGGATGATGCACGCGAGTTGGATTCTCCGAGCAGCCACCGTTTCTCCCCAGAAATCCTTCCGCCGCGCGTTGCCTCGCCGTCCAGAAGTTTTTCTCCGCCTGCTCGTACCGCCGGAAACCCTTGCCGCTTGCTTGGATGGCTTGGGTTGGTTCTTTTGCAAGGTGGTGCGATGTGAGGTCTCCTCGTGGTTATCTCGGTCTCCCCCGCGAAGTAACCCTTCTTCTTGGCAGTCCCCTTGTTCGCAAGCTGTGAAGCTCAGTCCGCGATCTAAGGTGTTAGTTCGCGAGCTTCCCTTGCCGCCAGCCGTGGTCCACGTTCGGTCTCGCGTTCCGTGGAGTTGCCTTTGTCCGCGAGCTGAGGAGTCTTGTCACGTTCTGAGTCCCTCTGCCTGCCTCTTCTTACAGCGAACTCCCTTGGTCTGCGAGAGTGTGGTCTCGCCAAGGAGTAAACGTTTGGAAGCTTGCCTTTCTCGCGTTTCAGACCCTTCCTTGCCGCGTGGTGCACTTGGACTAACGCATCCGAGTGTACCTGCATGCATGATGGGTGTTTCCTTCGGGATCACCAGACTGATGGGTGTTTCCTTCGGGATCACCAAACTGATAGGTGTTTCCTTCGAGATCACCAGACTGATGGTGCGACCCTCGGGCCACCAGACTGATGGGTGCTTCCTTCGGGATCACCAGACTGATTAG

Protein sequence

MEMRAKTQDVRWYEVDALRNAEWDMRGGRGMMHASWILRAATVSPQKSFRRALPRRPEVFLRLLVPPETLAACLDGLGWFFCKVVRCEVSSWLSRSPPRSNPSSWQSPCSQAVKLSPRSKVLVRELPLPPAVVHVRSRVPWSCLCPRAEESCHVLSPSACLFLQRTPLVCESVVSPRSKRLEACLSRVSDPSLPRGALGLTHPSVPACMMGVSFGITRLMGVSFGITKLIGVSFEITRLMVRPSGHQTDGCFLRDHQTD

Homology

The following BLAST results are available for this feature:

BLAST of PI0029021.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0029021.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0029021.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0029021.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0029021	PI0029021	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0029021.1-exon	PI0029021.1-exon-chr09:11179748..11179916	exon
PI0029021.1-exon	PI0029021.1-exon-chr09:11180194..11180291	exon
PI0029021.1-exon	PI0029021.1-exon-chr09:11180382..11180608	exon
PI0029021.1-exon	PI0029021.1-exon-chr09:11180694..11180869	exon
PI0029021.1-exon	PI0029021.1-exon-chr09:11181938..11182047	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0029021.1-cds	PI0029021.1-cds-chr09:11179748..11179916	CDS
PI0029021.1-cds	PI0029021.1-cds-chr09:11180194..11180291	CDS
PI0029021.1-cds	PI0029021.1-cds-chr09:11180382..11180608	CDS
PI0029021.1-cds	PI0029021.1-cds-chr09:11180694..11180869	CDS
PI0029021.1-cds	PI0029021.1-cds-chr09:11181938..11182047	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0029021.1	PI0029021.1-protein	polypeptide