PI0028514.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0028514.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	2-iminobutanoate/2-iminopropanoate deaminase-like
Location	chr06: 26271138 .. 26273876 (+)
Sequence length	1116
RNA-Seq Expression	PI0028514.1
Synteny	PI0028514.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGTGGTCCTCCTCAAGCTCAATAAAAAGGTGCGTAAATGAAGCAATGAGATTCATTGGAGGGACTAAATTAAAGTGTGTGAGGAAGAAGAAATCTAGAAGAAAAGGAGCTCGCAAAGTAATGGCTATGTCCGCAGCTCACAGCCTCCAAATTCCAGCCTCCACCACCATTACACGGCGGCGATCCATCACTCCCTCCGTTGGCACCGCCGTGTCCTTGTGGCGGCGGCCTTCACCGGCCATTCCATCTATTTCAAGCCGTCAAATGTCCTTCAAATGCCATGCCATTTCCAAGTGTACTGGTAATAATAATACGGCCATCATTTTCTTTCAGCTACTTCGTTCATCAATTTTTTTTAAATGTTATTTTAAAGAAATTCATCATCAACCATTTTTATGTTAAGTAGCTTTTTTTAAAAAAAATTAACAACCCATTTCAATAGAAATGGTTAATGAATTTGAGACAACATTTAAAAAAGAAAAAAAATGAACGTGTCCAATTAAAAAAGACAATAATAATAATAAAAAAAAACATCTTCATACACAAGAAAATAAAAAGTTGAGATGTTTAAAAGACACATTTTAATAAAACAAGTAAAAAATTCATTTGTTTTAAAAATAGTTTCAAACATGTTAGGAGTGCAAACAAAATTGAACATTGGTTAGGGTAGAGATTGCACAACTATTTTCATTGGTATGAGACCTTTTGGAGTGGTATCAAAAGCAAAACCACGAGGGTATATTTCAAAAGTAGAAAATATCATGTGAAGATATGTGAAAGTTTCTTGTCCTTAACAAAGCCAAATGATTTTAGTAATTTTTAAATATTTTTTAGTGAAAAATACATTTTTAGTCCTAAATTTTGATGAAAACTTATATTTGGTGCCTAGTTTTAAAAGGAGAAACGGATGAAAATATTTAAAAAAATATAGAAAAAAGTTTCAAATTTTATCAGTAAAGATAAAAGCATACAACAATTAGACAAATCACTCACATGTTTAGTCTTCAAACATTAAAAAGCTTACAATAAATTAAAATTGAAGGTAAAAATTAGTTTGTTTCCCTAAAGATTATCCCACCACTTAATAGCAATGTTTTTTGTGGCAGAAATCATAGGTATTGAAACTGACAATGCCCCAGAAGCATTGGGGCCATATTCTCAGGGAATCATAGCCAACAATCTTGTATTTGTGTCTGGCTCTCTTGGTCTTATTCCCGAGGTACCATTTTCTAATGTCTAACATAAACATAGTTCATTGATCGGTTAGGTTTCAATTACTTGTCATGAGTTCGTGCTCGTGGGCATGTATAATTGAGTATATTGAATGTTTTTTGGTTTAATGCAGACAGGGGAATTGATCTCAGACGATGTTGCAGAGCAAACTGAGCAGGTTTTAATTTTTTAGTTTTTTCTAAAAATAAAAATTAAATTTTGTTGAGCTTTTTAGATCAAATTTCATAGCATTTCTAAGAAAATGAAATATTCTGCAGGCCCTAAAAAATATTGGTGCAATATTGAGAGCTGGAGGGGCTGATTATGATAGAGTGGTTAAGACAACTATTATGTATGAAATCTTGACTATCTTTTTGCATTTATAGCCCTTTTTTATCCCATGTTTTGGAAAATGGTACTCTCGTGCTTTCGTTTCAAGATTTTTTTTTGTGGCTTATTACGAGATAGAATGACTTGGTATAACTTTCGAAGCGTTTAAAAATTCATTTTTGTTACTAAGATTTAAGATAAAAAATTTTCTCTTTCGATATTAATTTGAAGACTAAAATGAAAATAGAGTATAAAAAGTTGAATATCAAGATAGATTTATGCCTCGTTTTGAAAGATAGGTTGTAAATGTGTAAAGATACAAAATTACAGAGAACTTAAACATCTTTTCACTATAAAATCGTAACTTTCAAGCACTCTCATGTCTTTTAGGCAGATTTGTGAGTGATTTTTTTTATATTGATTATAAACACTCATAAATATGAATTTAATCATCTAAAACCAATTTTAGAATCACTCATAAACATACCTTTAATAGTTTGTTCTTCGCATTTCGTTTCTTGCAGGTTGGCTAATGTTGCGGATTTTACATTAGTAAATGAGATTTATGCAAAATGTAAGTTGTTCTAAAATGAATTGTTCTAAATGATCAAGAACATGAAATCTAAAGTTCTAAGTTGTTTGTTTTTTCATTTTTTTTTGACAGATTTTCCAAACTCCCCTGCACCAGCAAGATCAACATTTGCAGCTGGAGCATTACCCAAAAATGCTAAGATTGAAATTGATGCAATAGCTGTGATTTGAATTTGAAGTATATATTAATTATAGTTTTTGAAGGCAACATTATCATAAATTTAAATAAGTTGGAGTTGGAGATAGAAGAAAGGGAACATCCACCAAATTTACTATTTGGCTTGTGTATTATTACCTTAGGCTTTATCTTGTTACCAACATTTTAGTATTGTAATAACTTTATTTTCACTAACATATGCTTTTTAAGCTATGGAAGTGGAAATAGAGAGGTAATGGAAGATAGTGTTAGTCTTGGTTATGAAGTGCTTTTCTCATTGCTACAATGGCTTAAATTACTACTCTTGTTCAAATGTTTTGGTTAATCATGTTAATTTCATTGCATTTTGGGATCTTTGTAAGTTCAAAGTGACAAAAACTAGAAGGGCTCTTGAAGTGTGGGGAAAAAGTGGTTTTCTTCCCACAATATATTAAAATAGGATTTTTTTA

mRNA sequence

GGGTGGTCCTCCTCAAGCTCAATAAAAAGGTGCGTAAATGAAGCAATGAGATTCATTGGAGGGACTAAATTAAAGTGTGTGAGGAAGAAGAAATCTAGAAGAAAAGGAGCTCGCAAAGTAATGGCTATGTCCGCAGCTCACAGCCTCCAAATTCCAGCCTCCACCACCATTACACGGCGGCGATCCATCACTCCCTCCGTTGGCACCGCCGTGTCCTTGTGGCGGCGGCCTTCACCGGCCATTCCATCTATTTCAAGCCGTCAAATGTCCTTCAAATGCCATGCCATTTCCAAGTGTACTGAAATCATAGGTATTGAAACTGACAATGCCCCAGAAGCATTGGGGCCATATTCTCAGGGAATCATAGCCAACAATCTTGTATTTGTGTCTGGCTCTCTTGGTCTTATTCCCGAGACAGGGGAATTGATCTCAGACGATGTTGCAGAGCAAACTGAGCAGGCCCTAAAAAATATTGGTGCAATATTGAGAGCTGGAGGGGCTGATTATGATAGAGTGGTTAAGACAACTATTATGTTGGCTAATGTTGCGGATTTTACATTAGTAAATGAGATTTATGCAAAATATTTTCCAAACTCCCCTGCACCAGCAAGATCAACATTTGCAGCTGGAGCATTACCCAAAAATGCTAAGATTGAAATTGATGCAATAGCTGTGATTTGAATTTGAAGTATATATTAATTATAGTTTTTGAAGGCAACATTATCATAAATTTAAATAAGTTGGAGTTGGAGATAGAAGAAAGGGAACATCCACCAAATTTACTATTTGGCTTGTGTATTATTACCTTAGGCTTTATCTTGTTACCAACATTTTAGTATTGTAATAACTTTATTTTCACTAACATATGCTTTTTAAGCTATGGAAGTGGAAATAGAGAGGTAATGGAAGATAGTGTTAGTCTTGGTTATGAAGTGCTTTTCTCATTGCTACAATGGCTTAAATTACTACTCTTGTTCAAATGTTTTGGTTAATCATGTTAATTTCATTGCATTTTGGGATCTTTGTAAGTTCAAAGTGACAAAAACTAGAAGGGCTCTTGAAGTGTGGGGAAAAAGTGGTTTTCTTCCCACAATATATTAAAATAGGATTTTTTTA

Coding sequence (CDS)

ATGAGATTCATTGGAGGGACTAAATTAAAGTGTGTGAGGAAGAAGAAATCTAGAAGAAAAGGAGCTCGCAAAGTAATGGCTATGTCCGCAGCTCACAGCCTCCAAATTCCAGCCTCCACCACCATTACACGGCGGCGATCCATCACTCCCTCCGTTGGCACCGCCGTGTCCTTGTGGCGGCGGCCTTCACCGGCCATTCCATCTATTTCAAGCCGTCAAATGTCCTTCAAATGCCATGCCATTTCCAAGTGTACTGAAATCATAGGTATTGAAACTGACAATGCCCCAGAAGCATTGGGGCCATATTCTCAGGGAATCATAGCCAACAATCTTGTATTTGTGTCTGGCTCTCTTGGTCTTATTCCCGAGACAGGGGAATTGATCTCAGACGATGTTGCAGAGCAAACTGAGCAGGCCCTAAAAAATATTGGTGCAATATTGAGAGCTGGAGGGGCTGATTATGATAGAGTGGTTAAGACAACTATTATGTTGGCTAATGTTGCGGATTTTACATTAGTAAATGAGATTTATGCAAAATATTTTCCAAACTCCCCTGCACCAGCAAGATCAACATTTGCAGCTGGAGCATTACCCAAAAATGCTAAGATTGAAATTGATGCAATAGCTGTGATTTGA

Protein sequence

MRFIGGTKLKCVRKKKSRRKGARKVMAMSAAHSLQIPASTTITRRRSITPSVGTAVSLWRRPSPAIPSISSRQMSFKCHAISKCTEIIGIETDNAPEALGPYSQGIIANNLVFVSGSLGLIPETGELISDDVAEQTEQALKNIGAILRAGGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIEIDAIAVI

Homology

[Close]

BLAST of PI0028514.1 vs. ExPASy Swiss-Prot
Match: Q94JQ4 (Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RIDA PE=1 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.6e-40
Identity = 100/190 (52.63%), Postives = 124/190 (65.26%), Query Frame = 0


Query: 26  MAMSAAHSLQIPASTTITRRRSI-TPSVGTAVSLWRRPSPAIPSISSRQMSFKCHAISKC 85
           M  S   S+  P     T  RS  TP V   V        ++  +SSR   F   ++S  
Sbjct: 1   MTWSVFRSINTPTLDLSTALRSTRTPLVAAGVGCATFAGVSLFRMSSRSPPFASLSVSAS 60

Query: 86  T---EIIGIETDNAPEALGPYSQGIIANNLVFVSGSLGLIPETGELISDDVAEQTEQALK 145
           +   E+  + T+ AP ALGPYSQ I ANNLVF+SG LGLIPETG+ +S+ V +QTEQ LK
Sbjct: 61  SVKKEV--VSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVLK 120

Query: 146 NIGAILRAGGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNA 205
           N+G IL+A GADY  VVKTTIMLA++ADF  VNEIYAKYFP +P+PARST+   ALP NA
Sbjct: 121 NMGEILKASGADYSSVVKTTIMLADLADFKTVNEIYAKYFP-APSPARSTYQVAALPLNA 180

Query: 206 KIEIDAIAVI 212
           KIEI+ IA +
Sbjct: 181 KIEIECIATL 187

[Close]

BLAST of PI0028514.1 vs. ExPASy Swiss-Prot
Match: Q10121 (RutC family protein C23G10.2 OS=Caenorhabditis elegans OX=6239 GN=C23G10.2 PE=3 SV=3)

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-31
Identity = 66/121 (54.55%), Postives = 90/121 (74.38%), Query Frame = 0


Query: 90  IETDNAPEALGPYSQGIIANNLVFVSGSLGLIPETGELISDDVAEQTEQALKNIGAILRA 149
           I + NAP A+GPYSQ + A N +++SGSLGL P+TG+L  + V EQT Q+LKN+G +L+A
Sbjct: 44  ISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDL-KEGVVEQTHQSLKNLGEVLKA 103

Query: 150 GGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIEIDAIA 209
            GADY  VVKTT++L N+ADF  VNE+Y +YF  SP PAR+ +   ALPK   +EI+A+A
Sbjct: 104 AGADYGNVVKTTVLLQNIADFAAVNEVYGQYF-KSPYPARAAYQVAALPKGGLVEIEAVA 162

Query: 210 V 211
           +
Sbjct: 164 I 162

[Close]

BLAST of PI0028514.1 vs. ExPASy Swiss-Prot
Match: P52758 (2-iminobutanoate/2-iminopropanoate deaminase OS=Homo sapiens OX=9606 GN=RIDA PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.1e-29
Identity = 60/121 (49.59%), Postives = 89/121 (73.55%), Query Frame = 0


Query: 90  IETDNAPEALGPYSQGIIANNLVFVSGSLGLIPETGELISDDVAEQTEQALKNIGAILRA 149
           I T  AP A+GPYSQ ++ +  +++SG +G+ P +G+L+S  VAE+ +QALKN+G IL+A
Sbjct: 9   ISTAKAPGAIGPYSQAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMGEILKA 68

Query: 150 GGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIEIDAIA 209
            G D+  VVKTT++LA++ DF  VNEIY +YF  S  PAR+ +   ALPK ++IEI+A+A
Sbjct: 69  AGCDFTNVVKTTVLLADINDFNTVNEIYKQYF-KSNFPARAAYQVAALPKGSRIEIEAVA 128

Query: 210 V 211
           +
Sbjct: 129 I 128

[Close]

BLAST of PI0028514.1 vs. ExPASy Swiss-Prot
Match: P52759 (2-iminobutanoate/2-iminopropanoate deaminase OS=Rattus norvegicus OX=10116 GN=Rida PE=1 SV=3)

HSP 1 Score: 126.7 bits (317), Expect = 3.1e-28
Identity = 60/121 (49.59%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 90  IETDNAPEALGPYSQGIIANNLVFVSGSLGLIPETGELISDDVAEQTEQALKNIGAILRA 149
           I T  AP A+G YSQ ++ +  ++VSG +G+ P +G+L+   VAE+ +QALKN+G IL+A
Sbjct: 9   ISTSKAPAAIGAYSQAVLVDRTIYVSGQIGMDPSSGQLVPGGVAEEAKQALKNLGEILKA 68

Query: 150 GGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIEIDAIA 209
            G D+  VVKTT++LA++ DF  VNEIY  YF  +  PAR+ +   ALPK ++IEI+AIA
Sbjct: 69  AGCDFTNVVKTTVLLADINDFGTVNEIYKTYFQGN-LPARAAYQVAALPKGSRIEIEAIA 128

Query: 210 V 211
           V
Sbjct: 129 V 128

[Close]

BLAST of PI0028514.1 vs. ExPASy Swiss-Prot
Match: Q3T114 (2-iminobutanoate/2-iminopropanoate deaminase OS=Bos taurus OX=9913 GN=RIDA PE=2 SV=3)

HSP 1 Score: 126.3 bits (316), Expect = 4.0e-28
Identity = 58/121 (47.93%), Postives = 87/121 (71.90%), Query Frame = 0


Query: 90  IETDNAPEALGPYSQGIIANNLVFVSGSLGLIPETGELISDDVAEQTEQALKNIGAILRA 149
           I T  AP A+GPYSQ ++ +  +++SG LG+ P +G+L+   VAE+ +QAL NIG IL+A
Sbjct: 9   ISTAKAPAAIGPYSQAVLVDRTIYISGQLGMDPASGQLVPGGVAEEAKQALTNIGEILKA 68

Query: 150 GGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIEIDAIA 209
            G D+  VVK T++LA++ DF+ VN++Y +YF +S  PAR+ +   ALPK  ++EI+AIA
Sbjct: 69  AGCDFTNVVKATVLLADINDFSTVNDVYKQYFQSS-FPARAAYQVAALPKGGRVEIEAIA 128

Query: 210 V 211
           V
Sbjct: 129 V 128

[Close]

BLAST of PI0028514.1 vs. ExPASy TrEMBL
Match: A0RZC7 (Plastid-lipid associated protein OS=Cucumis sativus OX=3659 GN=CHRD PE=2 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 5.5e-89
Identity = 174/187 (93.05%), Postives = 180/187 (96.26%), Query Frame = 0


Query: 26  MAMSAAHSLQIPASTTITRRRSITPSVGTAVSLWRRPSPAIPSISSRQMSFKCHAISKC- 85
           MAMSAAH+LQIPAST ITRRRSITPS GTAVSLWRRPSPAIPSISS QMSFKCHAISKC 
Sbjct: 1   MAMSAAHTLQIPASTAITRRRSITPSAGTAVSLWRRPSPAIPSISSHQMSFKCHAISKCT 60

Query: 86  TEIIGIETDNAPEALGPYSQGIIANNLVFVSGSLGLIPETGELISDDVAEQTEQALKNIG 145
           TEIIGI TDNAPEALGPYSQGIIANNLV+VSGSLGLIPETG+LISDDV EQTEQALKN+G
Sbjct: 61  TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG 120

Query: 146 AILRAGGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIE 205
           AILRAGGADYDRV+KTTIMLANVADFTLVNEIY KYFPNSPAPARSTFAAGALPKNAKIE
Sbjct: 121 AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNSPAPARSTFAAGALPKNAKIE 180

Query: 206 IDAIAVI 212
           IDAIAV+
Sbjct: 181 IDAIAVL 187

[Close]

BLAST of PI0028514.1 vs. ExPASy TrEMBL
Match: A0A0A0L6A5 (Plastid-lipid associated protein OS=Cucumis sativus OX=3659 GN=Csa_3G076580 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.7e-88
Identity = 173/187 (92.51%), Postives = 179/187 (95.72%), Query Frame = 0


Query: 26  MAMSAAHSLQIPASTTITRRRSITPSVGTAVSLWRRPSPAIPSISSRQMSFKCHAISKC- 85
           MAMSAAH+LQIPAST ITRRRSITPS  TAVSLWRRPSPAIPSISSRQMSFKCHAISKC 
Sbjct: 1   MAMSAAHTLQIPASTAITRRRSITPSASTAVSLWRRPSPAIPSISSRQMSFKCHAISKCT 60

Query: 86  TEIIGIETDNAPEALGPYSQGIIANNLVFVSGSLGLIPETGELISDDVAEQTEQALKNIG 145
           TEIIGI TDNAPEALGPYSQGIIANNLV+VSGSLGLIPETG+LISDDV EQTEQALKN+G
Sbjct: 61  TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG 120

Query: 146 AILRAGGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIE 205
           AILRAGGADYDRV+KTTIMLANVADFTLVNEIY KYFPN PAPARSTFAAGALPKNAKIE
Sbjct: 121 AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNAKIE 180

Query: 206 IDAIAVI 212
           IDAIAV+
Sbjct: 181 IDAIAVL 187

[Close]

BLAST of PI0028514.1 vs. ExPASy TrEMBL
Match: A0A5D3BWQ5 (Ribonuclease UK114-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00100 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 2.2e-85
Identity = 170/187 (90.91%), Postives = 177/187 (94.65%), Query Frame = 0


Query: 26  MAMSAAHSLQIPASTTITRRRSITPSVGTAVSLWRRPSPAIPSISSRQMSFKCHAISKC- 85
           MAMSAAH+LQIPAST ITR RS TPS GTAVSLWRRP PAIPSISSRQMSFKC AISKC 
Sbjct: 1   MAMSAAHTLQIPASTAITRGRSFTPSAGTAVSLWRRPLPAIPSISSRQMSFKCLAISKCT 60

Query: 86  TEIIGIETDNAPEALGPYSQGIIANNLVFVSGSLGLIPETGELISDDVAEQTEQALKNIG 145
           TEI GI TDNAPEALGPYSQGIIANN+++VSGSLGLIP+TGELISDDV EQTEQALKN+G
Sbjct: 61  TEIKGIATDNAPEALGPYSQGIIANNILYVSGSLGLIPKTGELISDDVGEQTEQALKNVG 120

Query: 146 AILRAGGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIE 205
           AILRAGGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIE
Sbjct: 121 AILRAGGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIE 180

Query: 206 IDAIAVI 212
           IDAIAV+
Sbjct: 181 IDAIAVL 187

[Close]

BLAST of PI0028514.1 vs. ExPASy TrEMBL
Match: A0A1S3CJ80 (ribonuclease UK114-like OS=Cucumis melo OX=3656 GN=LOC103501582 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 2.2e-85
Identity = 170/187 (90.91%), Postives = 177/187 (94.65%), Query Frame = 0


Query: 26  MAMSAAHSLQIPASTTITRRRSITPSVGTAVSLWRRPSPAIPSISSRQMSFKCHAISKC- 85
           MAMSAAH+LQIPAST ITR RS TPS GTAVSLWRRP PAIPSISSRQMSFKC AISKC 
Sbjct: 1   MAMSAAHTLQIPASTAITRGRSFTPSAGTAVSLWRRPLPAIPSISSRQMSFKCLAISKCT 60

Query: 86  TEIIGIETDNAPEALGPYSQGIIANNLVFVSGSLGLIPETGELISDDVAEQTEQALKNIG 145
           TEI GI TDNAPEALGPYSQGIIANN+++VSGSLGLIP+TGELISDDV EQTEQALKN+G
Sbjct: 61  TEIKGIATDNAPEALGPYSQGIIANNILYVSGSLGLIPKTGELISDDVGEQTEQALKNVG 120

Query: 146 AILRAGGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIE 205
           AILRAGGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIE
Sbjct: 121 AILRAGGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIE 180

Query: 206 IDAIAVI 212
           IDAIAV+
Sbjct: 181 IDAIAVL 187

[Close]

BLAST of PI0028514.1 vs. ExPASy TrEMBL
Match: A0A6J1JD57 (2-iminobutanoate/2-iminopropanoate deaminase-like OS=Cucurbita maxima OX=3661 GN=LOC111483310 PE=3 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.5e-73
Identity = 148/186 (79.57%), Postives = 163/186 (87.63%), Query Frame = 0


Query: 26  MAMSAAHSLQIPASTTITRRRSITPSVGTAVSLWRRPSPAIPSISSRQMSFKCHAISKCT 85
           MA   AH+ QIPAS  I+R R++TPSVG AVSLWRRPS +IPSIS+R MSFKCHAISKC 
Sbjct: 1   MAYCTAHTFQIPASNVISRPRTVTPSVGAAVSLWRRPS-SIPSISNRNMSFKCHAISKCD 60

Query: 86  EIIGIETDNAPEALGPYSQGIIANNLVFVSGSLGLIPETGELISDDVAEQTEQALKNIGA 145
           +I  IET+ APEALGPYSQGIIANN +FVSGSLGLIPETGELISD V EQ EQALKNIGA
Sbjct: 61  DITTIETNEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGEQAEQALKNIGA 120

Query: 146 ILRAGGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIEI 205
           IL+AGGADY+RVVKTTIMLA+VADF LVN+IYA+YF   PAPARSTF AGALPKNAKIEI
Sbjct: 121 ILKAGGADYNRVVKTTIMLADVADFALVNQIYARYFSEYPAPARSTFQAGALPKNAKIEI 180

Query: 206 DAIAVI 212
           DAIAV+
Sbjct: 181 DAIAVV 185

[Close]

BLAST of PI0028514.1 vs. NCBI nr
Match: NP_001267661.1 (chordin [Cucumis sativus] >ABA18632.1 plastid-lipid associated protein [Cucumis sativus] >ABA18633.1 plastid-lipid associated protein [Cucumis sativus])

HSP 1 Score: 337.0 bits (863), Expect = 1.1e-88
Identity = 174/187 (93.05%), Postives = 180/187 (96.26%), Query Frame = 0


Query: 26  MAMSAAHSLQIPASTTITRRRSITPSVGTAVSLWRRPSPAIPSISSRQMSFKCHAISKC- 85
           MAMSAAH+LQIPAST ITRRRSITPS GTAVSLWRRPSPAIPSISS QMSFKCHAISKC 
Sbjct: 1   MAMSAAHTLQIPASTAITRRRSITPSAGTAVSLWRRPSPAIPSISSHQMSFKCHAISKCT 60

Query: 86  TEIIGIETDNAPEALGPYSQGIIANNLVFVSGSLGLIPETGELISDDVAEQTEQALKNIG 145
           TEIIGI TDNAPEALGPYSQGIIANNLV+VSGSLGLIPETG+LISDDV EQTEQALKN+G
Sbjct: 61  TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG 120

Query: 146 AILRAGGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIE 205
           AILRAGGADYDRV+KTTIMLANVADFTLVNEIY KYFPNSPAPARSTFAAGALPKNAKIE
Sbjct: 121 AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNSPAPARSTFAAGALPKNAKIE 180

Query: 206 IDAIAVI 212
           IDAIAV+
Sbjct: 181 IDAIAVL 187

[Close]

BLAST of PI0028514.1 vs. NCBI nr
Match: KGN56122.1 (hypothetical protein Csa_010346 [Cucumis sativus])

HSP 1 Score: 334.7 bits (857), Expect = 5.7e-88
Identity = 173/187 (92.51%), Postives = 179/187 (95.72%), Query Frame = 0


Query: 26  MAMSAAHSLQIPASTTITRRRSITPSVGTAVSLWRRPSPAIPSISSRQMSFKCHAISKC- 85
           MAMSAAH+LQIPAST ITRRRSITPS  TAVSLWRRPSPAIPSISSRQMSFKCHAISKC 
Sbjct: 1   MAMSAAHTLQIPASTAITRRRSITPSASTAVSLWRRPSPAIPSISSRQMSFKCHAISKCT 60

Query: 86  TEIIGIETDNAPEALGPYSQGIIANNLVFVSGSLGLIPETGELISDDVAEQTEQALKNIG 145
           TEIIGI TDNAPEALGPYSQGIIANNLV+VSGSLGLIPETG+LISDDV EQTEQALKN+G
Sbjct: 61  TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG 120

Query: 146 AILRAGGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIE 205
           AILRAGGADYDRV+KTTIMLANVADFTLVNEIY KYFPN PAPARSTFAAGALPKNAKIE
Sbjct: 121 AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNAKIE 180

Query: 206 IDAIAVI 212
           IDAIAV+
Sbjct: 181 IDAIAVL 187

[Close]

BLAST of PI0028514.1 vs. NCBI nr
Match: XP_008463411.1 (PREDICTED: ribonuclease UK114-like [Cucumis melo] >TYK02559.1 ribonuclease UK114-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 325.1 bits (832), Expect = 4.5e-85
Identity = 170/187 (90.91%), Postives = 177/187 (94.65%), Query Frame = 0


Query: 26  MAMSAAHSLQIPASTTITRRRSITPSVGTAVSLWRRPSPAIPSISSRQMSFKCHAISKC- 85
           MAMSAAH+LQIPAST ITR RS TPS GTAVSLWRRP PAIPSISSRQMSFKC AISKC 
Sbjct: 1   MAMSAAHTLQIPASTAITRGRSFTPSAGTAVSLWRRPLPAIPSISSRQMSFKCLAISKCT 60

Query: 86  TEIIGIETDNAPEALGPYSQGIIANNLVFVSGSLGLIPETGELISDDVAEQTEQALKNIG 145
           TEI GI TDNAPEALGPYSQGIIANN+++VSGSLGLIP+TGELISDDV EQTEQALKN+G
Sbjct: 61  TEIKGIATDNAPEALGPYSQGIIANNILYVSGSLGLIPKTGELISDDVGEQTEQALKNVG 120

Query: 146 AILRAGGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIE 205
           AILRAGGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIE
Sbjct: 121 AILRAGGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIE 180

Query: 206 IDAIAVI 212
           IDAIAV+
Sbjct: 181 IDAIAVL 187

[Close]

BLAST of PI0028514.1 vs. NCBI nr
Match: XP_038905772.1 (LOW QUALITY PROTEIN: 2-iminobutanoate/2-iminopropanoate deaminase-like, partial [Benincasa hispida])

HSP 1 Score: 294.3 bits (752), Expect = 8.5e-76
Identity = 155/186 (83.33%), Postives = 172/186 (92.47%), Query Frame = 0


Query: 27  AMSAAHSLQIPASTTITRRRSITPSVGTAVSLWRRPSPAIPSISSRQMSFKCHAISK-CT 86
           A SAAH+ QIPAS TI+RRRS+TPSVGTAV L  RPS +IPSIS RQMSFKC AISK CT
Sbjct: 7   ASSAAHNFQIPASNTISRRRSVTPSVGTAVFLRLRPS-SIPSISRRQMSFKCFAISKSCT 66

Query: 87  EIIGIETDNAPEALGPYSQGIIANNLVFVSGSLGLIPETGELISDDVAEQTEQALKNIGA 146
           +II IET  APEALGPYS+GIIANN+V+VSGSLGL+PETGELISDD+A+QTEQALKN+GA
Sbjct: 67  DIIVIETXKAPEALGPYSEGIIANNVVYVSGSLGLVPETGELISDDIADQTEQALKNVGA 126

Query: 147 ILRAGGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIEI 206
           ILRAGGADYDRVVKTTIMLAN+ADFTLVN+IYAKYFP+SPAP+RSTF AGALPKNAKI+I
Sbjct: 127 ILRAGGADYDRVVKTTIMLANIADFTLVNQIYAKYFPHSPAPSRSTFQAGALPKNAKIKI 186

Query: 207 DAIAVI 212
           DAIAVI
Sbjct: 187 DAIAVI 191

[Close]

BLAST of PI0028514.1 vs. NCBI nr
Match: XP_023553271.1 (2-iminobutanoate/2-iminopropanoate deaminase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 286.2 bits (731), Expect = 2.3e-73
Identity = 148/186 (79.57%), Postives = 164/186 (88.17%), Query Frame = 0


Query: 26  MAMSAAHSLQIPASTTITRRRSITPSVGTAVSLWRRPSPAIPSISSRQMSFKCHAISKCT 85
           MA  +A+S QIPA+  I+R R++TPSVG +VSLWRRPS +IPSIS+R MSFKCHAISKC 
Sbjct: 1   MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPS-SIPSISNRNMSFKCHAISKCR 60

Query: 86  EIIGIETDNAPEALGPYSQGIIANNLVFVSGSLGLIPETGELISDDVAEQTEQALKNIGA 145
           +II IETD APEALGPYSQGIIANN +FVSGSLGLIPETGELISDDV EQT QALKNIGA
Sbjct: 61  DIIPIETDKAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDDVGEQTMQALKNIGA 120

Query: 146 ILRAGGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIEI 205
           ILRAGGADY+RVVKTTIMLA+VADF LVNEIYA+YF   P PARSTF  GALPKNAKIEI
Sbjct: 121 ILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSKQPFPARSTFQVGALPKNAKIEI 180

Query: 206 DAIAVI 212
           DAIA++
Sbjct: 181 DAIALV 185

[Close]

BLAST of PI0028514.1 vs. TAIR 10
Match: AT3G20390.1 (endoribonuclease L-PSP family protein )

HSP 1 Score: 167.5 bits (423), Expect = 1.1e-41
Identity = 100/190 (52.63%), Postives = 124/190 (65.26%), Query Frame = 0


Query: 26  MAMSAAHSLQIPASTTITRRRSI-TPSVGTAVSLWRRPSPAIPSISSRQMSFKCHAISKC 85
           M  S   S+  P     T  RS  TP V   V        ++  +SSR   F   ++S  
Sbjct: 1   MTWSVFRSINTPTLDLSTALRSTRTPLVAAGVGCATFAGVSLFRMSSRSPPFASLSVSAS 60

Query: 86  T---EIIGIETDNAPEALGPYSQGIIANNLVFVSGSLGLIPETGELISDDVAEQTEQALK 145
           +   E+  + T+ AP ALGPYSQ I ANNLVF+SG LGLIPETG+ +S+ V +QTEQ LK
Sbjct: 61  SVKKEV--VSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVLK 120

Query: 146 NIGAILRAGGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNA 205
           N+G IL+A GADY  VVKTTIMLA++ADF  VNEIYAKYFP +P+PARST+   ALP NA
Sbjct: 121 NMGEILKASGADYSSVVKTTIMLADLADFKTVNEIYAKYFP-APSPARSTYQVAALPLNA 180

Query: 206 KIEIDAIAVI 212
           KIEI+ IA +
Sbjct: 181 KIEIECIATL 187

The following BLAST results are available for this feature:

BLAST of PI0028514.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JQ4	1.6e-40	52.63	Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q10121	1.3e-31	54.55	RutC family protein C23G10.2 OS=Caenorhabditis elegans OX=6239 GN=C23G10.2 PE=3 ...	[more]
P52758	2.1e-29	49.59	2-iminobutanoate/2-iminopropanoate deaminase OS=Homo sapiens OX=9606 GN=RIDA PE=...	[more]
P52759	3.1e-28	49.59	2-iminobutanoate/2-iminopropanoate deaminase OS=Rattus norvegicus OX=10116 GN=Ri...	[more]
Q3T114	4.0e-28	47.93	2-iminobutanoate/2-iminopropanoate deaminase OS=Bos taurus OX=9913 GN=RIDA PE=2 ...	[more]

BLAST of PI0028514.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0RZC7	5.5e-89	93.05	Plastid-lipid associated protein OS=Cucumis sativus OX=3659 GN=CHRD PE=2 SV=1	[more]
A0A0A0L6A5	2.7e-88	92.51	Plastid-lipid associated protein OS=Cucumis sativus OX=3659 GN=Csa_3G076580 PE=3...	[more]
A0A5D3BWQ5	2.2e-85	90.91	Ribonuclease UK114-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CJ80	2.2e-85	90.91	ribonuclease UK114-like OS=Cucumis melo OX=3656 GN=LOC103501582 PE=3 SV=1	[more]
A0A6J1JD57	1.5e-73	79.57	2-iminobutanoate/2-iminopropanoate deaminase-like OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of PI0028514.1 vs. NCBI nr


Match Name	E-value	Identity	Description
NP_001267661.1	1.1e-88	93.05	chordin [Cucumis sativus] >ABA18632.1 plastid-lipid associated protein [Cucumis ...	[more]
KGN56122.1	5.7e-88	92.51	hypothetical protein Csa_010346 [Cucumis sativus]	[more]
XP_008463411.1	4.5e-85	90.91	PREDICTED: ribonuclease UK114-like [Cucumis melo] >TYK02559.1 ribonuclease UK114...	[more]
XP_038905772.1	8.5e-76	83.33	LOW QUALITY PROTEIN: 2-iminobutanoate/2-iminopropanoate deaminase-like, partial ...	[more]
XP_023553271.1	2.3e-73	79.57	2-iminobutanoate/2-iminopropanoate deaminase-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0028514.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20390.1	1.1e-41	52.63	endoribonuclease L-PSP family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006056	RidA family	TIGRFAM	TIGR00004	TIGR00004	coord: 90..210 e-value: 2.0E-45 score: 152.0
IPR006175	YjgF/YER057c/UK114 family	PFAM	PF01042	Ribonuc_L-PSP	coord: 93..210 e-value: 5.0E-39 score: 133.1
IPR006175	YjgF/YER057c/UK114 family	PANTHER	PTHR11803	2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA	coord: 91..210
IPR035959	RutC-like superfamily	GENE3D	3.30.1330.40		coord: 87..211 e-value: 7.2E-45 score: 154.2
IPR035959	RutC-like superfamily	SUPERFAMILY	55298	YjgF-like	coord: 87..211
None	No IPR available	PANTHER	PTHR11803:SF51	BNAA05G36080D PROTEIN	coord: 91..210
None	No IPR available	CDD	cd00448	YjgF_YER057c_UK114_family	coord: 102..209 e-value: 1.03778E-45 score: 145.394
IPR019897	RidA, conserved site	PROSITE	PS01094	UPF0076	coord: 187..205

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0028514	PI0028514	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0028514.1-five_prime_utr	PI0028514.1-five_prime_utr-chr06:26271138..26271182	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0028514.1-exon	PI0028514.1-exon-chr06:26271138..26271438	exon
PI0028514.1-exon	PI0028514.1-exon-chr06:26272244..26272356	exon
PI0028514.1-exon	PI0028514.1-exon-chr06:26272483..26272527	exon
PI0028514.1-exon	PI0028514.1-exon-chr06:26272628..26272701	exon
PI0028514.1-exon	PI0028514.1-exon-chr06:26273204..26273253	exon
PI0028514.1-exon	PI0028514.1-exon-chr06:26273344..26273876	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0028514.1-cds	PI0028514.1-cds-chr06:26271183..26271438	CDS
PI0028514.1-cds	PI0028514.1-cds-chr06:26272244..26272356	CDS
PI0028514.1-cds	PI0028514.1-cds-chr06:26272483..26272527	CDS
PI0028514.1-cds	PI0028514.1-cds-chr06:26272628..26272701	CDS
PI0028514.1-cds	PI0028514.1-cds-chr06:26273204..26273253	CDS
PI0028514.1-cds	PI0028514.1-cds-chr06:26273344..26273441	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0028514.1-three_prime_utr	PI0028514.1-three_prime_utr-chr06:26273442..26273876	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0028514.1	PI0028514.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1901565	organonitrogen compound catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0019239	deaminase activity