PI0028378.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0028378.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Mediator of RNA polymerase II transcription subunit 12-like isoform X1
Location	chr06: 18692928 .. 18694315 (-)
Sequence length	825
RNA-Seq Expression	PI0028378.1
Synteny	PI0028378.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGGGAGTCTATTTTCTAACAAATCGGATCGGTATGTACATCTGATGTTCCTGGCATTATTGGGCGATTTACATGAGGCGGGTCGATACTCATGGGGTGGAGCGTGTTTGGCATGGTTGTACAGACAACTATGCAAAGCAGCAAAACGAGATATTCGTGAAATTACTGGTCCGTTAATACTGCTTCAAATATGGGCTTGGGAACGATTTCCCACAATGGCTCCACAACTAAGACATGCAAACGATCATCTACTATTTGAACGAGCACACGGTTCACGGTATGCTATTTTATTTTAATTTAGATCAAACAATAGTTTTAATAATAAATGAGTGATATAATTAATTCAAAACCTAAAATATTAGATTATTAATACAGATGGAGAGACCAATTTTGTGTAACAAGATCAGCTACTCATGTAGTTAGTCAATATAGATACATGTTTGATCTTCTTCAACGTGATCAGGTACATCAATACTAAAACTTTAATTATTTTATACATTAGTATACATATATTTAGTGATTTTTAATATAATGCGTGATATTTCAGATTATTTGGGAGCCTTACAAAAATGTAATACATAATTTACCCAATTTCTGTACGAATGGTCAACATATATGGCGGACCATCAGTCCTCTCATATGTTTTCATATTGGTGAGTGGCATTATCCTGATAGGGTGATCAGACAATTCAGTTTTAAACAAGATGTCCCATCAGAATGCAATACTGAGCCACTCCTGCACAATATTGACTTGAGAACCAGGGATTGGTCAGACAAGGTTGCACATTTGGTCGTGCGATGGCAATCTCGTAGAAGATTCATTGCCACTGGAGCTTCGATTCAACAATTTGATCAGGATGTGACTCAAGAATACATTCACTGGTATAATAATATTACGAGACTTTACATCACTCGACCAAGAGCAGTTGTGGGTCATCTGGTACGTATTTAAATATTGAATAATTTTTTTAAATTCTTTACTCAATTAACTATTCTCTTATTTTTTTTCAATTCACAGAGATCGAACAACAGAAGACTTCGTGATGTTGCAGATGATCCGCAACAAGTTCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAATAGGGGACGTGTTCGAGTGGAAGAACCTGAACTCAGAGTCGACGACGATCATTTGAACTCAGAGTCCACGAGAGTACCAACAAGAACCAGAGAATCAAGAGAAGCTAGGGCAACCAAGAGTTCAGAGTCGACGACGACAACCAACCCAAAATCGACGACGTCCGGGTTGTGGAACACATTGATTTTCTTTTATATTTTAAATGAATGTAATTTGGTTATTAAAAACATATAA

mRNA sequence

ATGGGTGGGAGTCTATTTTCTAACAAATCGGATCGGTATGTACATCTGATGTTCCTGGCATTATTGGGCGATTTACATGAGGCGGGTCGATACTCATGGGGTGGAGCGTGTTTGGCATGGTTGTACAGACAACTATGCAAAGCAGCAAAACGAGATATTCGTGAAATTACTGGTCCGTTAATACTGCTTCAAATATGGGCTTGGGAACGATTTCCCACAATGGCTCCACAACTAAGACATGCAAACGATCATCTACTATTTGAACGAGCACACGGTTCACGGGATTGGTCAGACAAGGTTGCACATTTGGTCGTGCGATGGCAATCTCGTAGAAGATTCATTGCCACTGGAGCTTCGATTCAACAATTTGATCAGGATGTGACTCAAGAATACATTCACTGGTATAATAATATTACGAGACTTTACATCACTCGACCAAGAGCAGTTGTGGGTCATCTGAGATCGAACAACAGAAGACTTCGTGATGTTGCAGATGATCCGCAACAAGTTCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAATAGGGGACGTGTTCGAGTGGAAGAACCTGAACTCAGAGTCGACGACGATCATTTGAACTCAGAGTCCACGAGAGTACCAACAAGAACCAGAGAATCAAGAGAAGCTAGGGCAACCAAGAGTTCAGAGTCGACGACGACAACCAACCCAAAATCGACGACGTCCGGGTTGTGGAACACATTGATTTTCTTTTATATTTTAAATGAATGTAATTTGGTTATTAAAAACATATAA

Coding sequence (CDS)

ATGGGTGGGAGTCTATTTTCTAACAAATCGGATCGGTATGTACATCTGATGTTCCTGGCATTATTGGGCGATTTACATGAGGCGGGTCGATACTCATGGGGTGGAGCGTGTTTGGCATGGTTGTACAGACAACTATGCAAAGCAGCAAAACGAGATATTCGTGAAATTACTGGTCCGTTAATACTGCTTCAAATATGGGCTTGGGAACGATTTCCCACAATGGCTCCACAACTAAGACATGCAAACGATCATCTACTATTTGAACGAGCACACGGTTCACGGGATTGGTCAGACAAGGTTGCACATTTGGTCGTGCGATGGCAATCTCGTAGAAGATTCATTGCCACTGGAGCTTCGATTCAACAATTTGATCAGGATGTGACTCAAGAATACATTCACTGGTATAATAATATTACGAGACTTTACATCACTCGACCAAGAGCAGTTGTGGGTCATCTGAGATCGAACAACAGAAGACTTCGTGATGTTGCAGATGATCCGCAACAAGTTCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAATAGGGGACGTGTTCGAGTGGAAGAACCTGAACTCAGAGTCGACGACGATCATTTGAACTCAGAGTCCACGAGAGTACCAACAAGAACCAGAGAATCAAGAGAAGCTAGGGCAACCAAGAGTTCAGAGTCGACGACGACAACCAACCCAAAATCGACGACGTCCGGGTTGTGGAACACATTGATTTTCTTTTATATTTTAAATGAATGTAATTTGGTTATTAAAAACATATAA

Protein sequence

MGGSLFSNKSDRYVHLMFLALLGDLHEAGRYSWGGACLAWLYRQLCKAAKRDIREITGPLILLQIWAWERFPTMAPQLRHANDHLLFERAHGSRDWSDKVAHLVVRWQSRRRFIATGASIQQFDQDVTQEYIHWYNNITRLYITRPRAVVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELRVDDDHLNSESTRVPTRTRESREARATKSSESTTTTNPKSTTSGLWNTLIFFYILNECNLVIKNI

Homology

[Close]

BLAST of PI0028378.1 vs. ExPASy Swiss-Prot
Match: Q9LNG5 (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.0e-16
Identity = 40/76 (52.63%), Postives = 49/76 (64.47%), Query Frame = 0


Query: 1   MGGSLFSNKSDRYVHLMFLALLGDLHEAGRYSWGGACLAWLYRQLCKAAKRDIREITGPL 60
           M G L+ +KS   V L FL LL D  E  + SWG A LA LYR+LC+A+KR +  I GPL
Sbjct: 189 MSGFLYGDKSKHDVALTFLPLLRDFDEVAKLSWGSATLALLYRELCRASKRTVSTICGPL 248

Query: 61  ILLQIWAWERFPTMAP 77
           +LLQ+WAWER     P
Sbjct: 249 VLLQLWAWERLHVGRP 264

[Close]

BLAST of PI0028378.1 vs. ExPASy Swiss-Prot
Match: F4IFD0 (Protein MAIN-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=At2g04865 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.7e-08
Identity = 30/84 (35.71%), Postives = 45/84 (53.57%), Query Frame = 0


Query: 1   MGGSLFSNKSDRYVHLMFLALLGDLHEAGRYSWGGACLAWLYRQLCKAAKRDIREITGPL 60
           +G ++FS  +   V +M+L L  D  +AG ++WG A LA+LYR L  A+ +    I G L
Sbjct: 182 VGSTIFSTTTGNKVPVMYLPLFEDFDDAGTFAWGAAALAFLYRALGNASVKSQSTICGCL 241

Query: 61  ILLQIWAWERFPTMAPQLRHANDH 85
            LLQ W++       P+L     H
Sbjct: 242 TLLQCWSYYHLNIGRPKLNREPIH 265

[Close]

BLAST of PI0028378.1 vs. ExPASy Swiss-Prot
Match: Q9SK32 (Protein MAIN-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=MAIL1 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.5e-08
Identity = 35/99 (35.35%), Postives = 50/99 (50.51%), Query Frame = 0


Query: 1   MGGSLFSNKSDRYVHLMFLALLGDLHEAGRYSWGGACLAWLYRQLCKAAKRDIREITGPL 60
           +G ++F+      V + +L L  D  +AGRY+WG A LA LYR L  A+ +    I G L
Sbjct: 184 IGSTIFATTDGDKVSVKYLPLFEDFDQAGRYAWGAAALACLYRALGNASLKSQSNICGCL 243

Query: 61  ILLQIWAWERFPTMAPQLRHANDHL-LFERAHGSRDWSD 99
            LLQ W++       P+   A   L L  +  GSR  +D
Sbjct: 244 TLLQCWSYFHLDIGRPEKSEACFPLALLWKGKGSRSKTD 282

[Close]

BLAST of PI0028378.1 vs. ExPASy Swiss-Prot
Match: Q9LMT7 (Protein MAINTENANCE OF MERISTEMS OS=Arabidopsis thaliana OX=3702 GN=MAIN PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.3e-07
Identity = 26/68 (38.24%), Postives = 41/68 (60.29%), Query Frame = 0


Query: 1   MGGSLFSNKSDRYVHLMFLALLGDLHEAGRYSWGGACLAWLYRQLCKAAKRDIREITGPL 60
           +G ++F+      + + +L L  D  +AG Y+WG A LA+LYRQ+  A++R    I G L
Sbjct: 172 VGSTIFATTDPSKISVDYLILFEDFEKAGEYAWGAAALAFLYRQIGNASQRSQSIIGGCL 231

Query: 61  ILLQIWAW 69
            LLQ W++
Sbjct: 232 TLLQCWSY 239

[Close]

BLAST of PI0028378.1 vs. ExPASy TrEMBL
Match: A0A5D3DUI1 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001210 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 7.0e-76
Identity = 154/303 (50.83%), Postives = 181/303 (59.74%), Query Frame = 0


Query: 1   MGGSLFSNKSDRYVHLMFLALLGDLHEAGRYSWGGACLAWLYRQLCKAAKRDIREITGPL 60
           MGGS+F++KS RYVHLMFL  L +LH  GRYSWGGACLAWLYRQLCKA+K+ +REI G L
Sbjct: 566 MGGSIFADKSTRYVHLMFLPFLANLHHTGRYSWGGACLAWLYRQLCKASKQGVREIAGSL 625

Query: 61  ILLQIWAWERFPTMAPQLRHANDHLLFERAHGSR-------------------------- 120
           ILLQIWAWERFP +APQL H N + L  RA+GSR                          
Sbjct: 626 ILLQIWAWERFPIVAPQLLHVNANQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQ 685

Query: 121 ------------------------------------------------DWSDKVAHLVVR 180
                                                           DW D+VAHLV+R
Sbjct: 686 PSQTISPLICFYIGEWHHPDRVLRQFGKAVPRDCNTEPLLHNIDLRTADWLDRVAHLVMR 745

Query: 181 WQSRRRFIATGASIQQFDQDVTQEYIHWYNNITRLYITRPRAVVGHLRSNNRRLRDVADD 229
           W +RRRF ATG  I+QFD DVTQEYIHWY NI++LYIT+P A + HLRSNN RLR++ADD
Sbjct: 746 WHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIADD 805

[Close]

BLAST of PI0028378.1 vs. ExPASy TrEMBL
Match: A0A5D3BAB0 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001240 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 2.0e-75
Identity = 159/333 (47.75%), Postives = 185/333 (55.56%), Query Frame = 0


Query: 1    MGGSLFSNKSDRYVHLMFLALLGDLHEAGRYSWGGACLAWLYRQLCKAAKRDIREITGPL 60
            MGGS+F++KS RYVHLMFL  L +LH  GRYSWGGACLAWLYRQLCKA+K+ +REI GPL
Sbjct: 809  MGGSIFADKSTRYVHLMFLPFLANLHHTGRYSWGGACLAWLYRQLCKASKQGVREIAGPL 868

Query: 61   ILLQIWAWERFPTMAPQLRHANDHLLFERAHGSR-------------------------- 120
            ILLQIWAWERFP +APQL H N + L  RA+GSR                          
Sbjct: 869  ILLQIWAWERFPIVAPQLLHVNANQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQ 928

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 929  PSQIVWEPYKTVIDSLPHFCTNGHNIWRTISPLICFYIGEWHHPDRVLRQFGIQQAVPRD 988

Query: 181  ---------------DWSDKVAHLVVRWQSRRRFIATGASIQQFDQDVTQEYIHWYNNIT 233
                           DWSD+VAHLV+RW +RRRF ATG  I+QFD DVTQEYIHWY NI+
Sbjct: 989  CNTEPLLHNIDLRTADWSDRVAHLVMRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNIS 1048

[Close]

BLAST of PI0028378.1 vs. ExPASy TrEMBL
Match: A0A5A7T598 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G00500 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 2.0e-75
Identity = 159/333 (47.75%), Postives = 185/333 (55.56%), Query Frame = 0


Query: 1   MGGSLFSNKSDRYVHLMFLALLGDLHEAGRYSWGGACLAWLYRQLCKAAKRDIREITGPL 60
           MGGS+F++KS RYVHLMFL  L +LH  GRYSWGGACLAWLYRQLCKA+K+ +REI GPL
Sbjct: 48  MGGSIFADKSTRYVHLMFLPFLANLHHTGRYSWGGACLAWLYRQLCKASKQGVREIAGPL 107

Query: 61  ILLQIWAWERFPTMAPQLRHANDHLLFERAHGSR-------------------------- 120
           ILLQIWAWERFP +APQL H N + L  RA+GSR                          
Sbjct: 108 ILLQIWAWERFPIVAPQLLHVNANQLHGRAYGSRWRDQFCVTRLATHVVSQYRYMFDLLQ 167

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 168 PSQIVWEPYKTVIDSLPHFCTNGHNIWRTISPLICFYIGEWHHPDRVLRQFGIQQAVPRD 227

Query: 181 ---------------DWSDKVAHLVVRWQSRRRFIATGASIQQFDQDVTQEYIHWYNNIT 233
                          DWSD+VAHLV+RW +RRRF ATG  I+QFD DVTQEYIHWY NI+
Sbjct: 228 CNTEPLLHNIDLRTADWSDRVAHLVMRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNIS 287

[Close]

BLAST of PI0028378.1 vs. ExPASy TrEMBL
Match: A0A5D3DJV7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00060 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 7.7e-75
Identity = 159/296 (53.72%), Postives = 180/296 (60.81%), Query Frame = 0


Query: 1   MGGSLFSNKSDRYVHLMFLALLGDLHEAGRYSWGGACLAWLYRQLCKAAKRDIREITGPL 60
           M  SLF +KS  +VHLMFL LLGDLHE GRYSW G CLAWLYRQLCKA+KRD+ +I G L
Sbjct: 97  MSESLFCDKSGSFVHLMFLILLGDLHEVGRYSWSGVCLAWLYRQLCKASKRDVHDIAGQL 156

Query: 61  ILLQIWAWERFPTMAPQLRHANDHLLFERAHGSRDWSDK--------------------- 120
           ILLQIWAWERF T+APQL H NDHLL  RA GSR W D+                     
Sbjct: 157 ILLQIWAWERFSTIAPQLTHTNDHLLSGRALGSR-WRDQFCVIRSATYVVNQYRYMFDLL 216

Query: 121 ----------------------------------VAHLVVRW-------------QSRRR 180
                                             +   +  W             +SRRR
Sbjct: 217 QRDQIIWEPYKDVIDNLPNFCKNGQDTWRTISPLICFYIGEWHHPDRGCTFSSTMRSRRR 276

Query: 181 FIATGASIQQFDQDVTQEYIHWYNNITRLYITRPRAVVGHLRSNNRRLRDVADDPQQVLD 229
           F+    SIQQFD DVTQEYIH YNNITRLYITRP A+VGHLRSNN RLRDV +DPQQVLD
Sbjct: 277 FMTIEVSIQQFDMDVTQEYIHLYNNITRLYITRPGAIVGHLRSNNARLRDVVNDPQQVLD 336

[Close]

BLAST of PI0028378.1 vs. ExPASy TrEMBL
Match: A0A5D3DIM2 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00560 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 2.5e-73
Identity = 141/228 (61.84%), Postives = 163/228 (71.49%), Query Frame = 0


Query: 1   MGGSLFSNKSDRYVHLMFLALLGDLHEAGRYSWGGACLAWLYRQLCKAAKRDIREITGPL 60
           MGGS+F++KS RYVHLMFL  L +LH  GRYSWGGACLAWLYRQLCKA+K+ +REI GPL
Sbjct: 610 MGGSIFADKSTRYVHLMFLPFLANLHHTGRYSWGGACLAWLYRQLCKASKQGVREIAGPL 669

Query: 61  ILLQIWAWERFPTMAPQLRHANDHLLFERAHGSRDWSDKVAHLVVRWQSRRRFIATGASI 120
           ILLQIWAWERFP +APQL H N + L  R +GS                 RRF ATG  I
Sbjct: 670 ILLQIWAWERFPIVAPQLLHVNGNQLHSRTYGS-----------------RRFTATGPPI 729

Query: 121 QQFDQDVTQEYIHWYNNITRLYITRPRAVVGHLRSNNRRLRDVADDPQQVLDICNNNERY 180
           +QFD DVTQEYIHWY NI  LYIT+P   + HLRSNN RL +VADDPQQVL+ICN+NE+Y
Sbjct: 730 EQFDMDVTQEYIHWYKNINNLYITQPGVAMSHLRSNNIRLWNVADDPQQVLNICNDNEQY 789

Query: 181 MEEIHYMYDVPIVPPPVNRGRVRVEEPELRVDDDHLNSESTRVPTRTR 229
           ME IHYMYDVPIVP PV + R  V+EP+   + D    E   VP  T+
Sbjct: 790 MENIHYMYDVPIVPAPVQKRRPLVQEPDQLEEVDQHEEE---VPPMTQ 817

[Close]

BLAST of PI0028378.1 vs. NCBI nr
Match: TYK27427.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 293.9 bits (751), Expect = 1.4e-75
Identity = 154/303 (50.83%), Postives = 181/303 (59.74%), Query Frame = 0


Query: 1   MGGSLFSNKSDRYVHLMFLALLGDLHEAGRYSWGGACLAWLYRQLCKAAKRDIREITGPL 60
           MGGS+F++KS RYVHLMFL  L +LH  GRYSWGGACLAWLYRQLCKA+K+ +REI G L
Sbjct: 566 MGGSIFADKSTRYVHLMFLPFLANLHHTGRYSWGGACLAWLYRQLCKASKQGVREIAGSL 625

Query: 61  ILLQIWAWERFPTMAPQLRHANDHLLFERAHGSR-------------------------- 120
           ILLQIWAWERFP +APQL H N + L  RA+GSR                          
Sbjct: 626 ILLQIWAWERFPIVAPQLLHVNANQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQ 685

Query: 121 ------------------------------------------------DWSDKVAHLVVR 180
                                                           DW D+VAHLV+R
Sbjct: 686 PSQTISPLICFYIGEWHHPDRVLRQFGKAVPRDCNTEPLLHNIDLRTADWLDRVAHLVMR 745

Query: 181 WQSRRRFIATGASIQQFDQDVTQEYIHWYNNITRLYITRPRAVVGHLRSNNRRLRDVADD 229
           W +RRRF ATG  I+QFD DVTQEYIHWY NI++LYIT+P A + HLRSNN RLR++ADD
Sbjct: 746 WHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIADD 805

[Close]

BLAST of PI0028378.1 vs. NCBI nr
Match: KAA0036767.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 292.4 bits (747), Expect = 4.2e-75
Identity = 159/333 (47.75%), Postives = 185/333 (55.56%), Query Frame = 0


Query: 1   MGGSLFSNKSDRYVHLMFLALLGDLHEAGRYSWGGACLAWLYRQLCKAAKRDIREITGPL 60
           MGGS+F++KS RYVHLMFL  L +LH  GRYSWGGACLAWLYRQLCKA+K+ +REI GPL
Sbjct: 48  MGGSIFADKSTRYVHLMFLPFLANLHHTGRYSWGGACLAWLYRQLCKASKQGVREIAGPL 107

Query: 61  ILLQIWAWERFPTMAPQLRHANDHLLFERAHGSR-------------------------- 120
           ILLQIWAWERFP +APQL H N + L  RA+GSR                          
Sbjct: 108 ILLQIWAWERFPIVAPQLLHVNANQLHGRAYGSRWRDQFCVTRLATHVVSQYRYMFDLLQ 167

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 168 PSQIVWEPYKTVIDSLPHFCTNGHNIWRTISPLICFYIGEWHHPDRVLRQFGIQQAVPRD 227

Query: 181 ---------------DWSDKVAHLVVRWQSRRRFIATGASIQQFDQDVTQEYIHWYNNIT 233
                          DWSD+VAHLV+RW +RRRF ATG  I+QFD DVTQEYIHWY NI+
Sbjct: 228 CNTEPLLHNIDLRTADWSDRVAHLVMRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNIS 287

[Close]

BLAST of PI0028378.1 vs. NCBI nr
Match: TYJ95836.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 292.4 bits (747), Expect = 4.2e-75
Identity = 159/333 (47.75%), Postives = 185/333 (55.56%), Query Frame = 0


Query: 1    MGGSLFSNKSDRYVHLMFLALLGDLHEAGRYSWGGACLAWLYRQLCKAAKRDIREITGPL 60
            MGGS+F++KS RYVHLMFL  L +LH  GRYSWGGACLAWLYRQLCKA+K+ +REI GPL
Sbjct: 809  MGGSIFADKSTRYVHLMFLPFLANLHHTGRYSWGGACLAWLYRQLCKASKQGVREIAGPL 868

Query: 61   ILLQIWAWERFPTMAPQLRHANDHLLFERAHGSR-------------------------- 120
            ILLQIWAWERFP +APQL H N + L  RA+GSR                          
Sbjct: 869  ILLQIWAWERFPIVAPQLLHVNANQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQ 928

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 929  PSQIVWEPYKTVIDSLPHFCTNGHNIWRTISPLICFYIGEWHHPDRVLRQFGIQQAVPRD 988

Query: 181  ---------------DWSDKVAHLVVRWQSRRRFIATGASIQQFDQDVTQEYIHWYNNIT 233
                           DWSD+VAHLV+RW +RRRF ATG  I+QFD DVTQEYIHWY NI+
Sbjct: 989  CNTEPLLHNIDLRTADWSDRVAHLVMRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNIS 1048

[Close]

BLAST of PI0028378.1 vs. NCBI nr
Match: TYK23842.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 290.4 bits (742), Expect = 1.6e-74
Identity = 159/296 (53.72%), Postives = 180/296 (60.81%), Query Frame = 0


Query: 1   MGGSLFSNKSDRYVHLMFLALLGDLHEAGRYSWGGACLAWLYRQLCKAAKRDIREITGPL 60
           M  SLF +KS  +VHLMFL LLGDLHE GRYSW G CLAWLYRQLCKA+KRD+ +I G L
Sbjct: 97  MSESLFCDKSGSFVHLMFLILLGDLHEVGRYSWSGVCLAWLYRQLCKASKRDVHDIAGQL 156

Query: 61  ILLQIWAWERFPTMAPQLRHANDHLLFERAHGSRDWSDK--------------------- 120
           ILLQIWAWERF T+APQL H NDHLL  RA GSR W D+                     
Sbjct: 157 ILLQIWAWERFSTIAPQLTHTNDHLLSGRALGSR-WRDQFCVIRSATYVVNQYRYMFDLL 216

Query: 121 ----------------------------------VAHLVVRW-------------QSRRR 180
                                             +   +  W             +SRRR
Sbjct: 217 QRDQIIWEPYKDVIDNLPNFCKNGQDTWRTISPLICFYIGEWHHPDRGCTFSSTMRSRRR 276

Query: 181 FIATGASIQQFDQDVTQEYIHWYNNITRLYITRPRAVVGHLRSNNRRLRDVADDPQQVLD 229
           F+    SIQQFD DVTQEYIH YNNITRLYITRP A+VGHLRSNN RLRDV +DPQQVLD
Sbjct: 277 FMTIEVSIQQFDMDVTQEYIHLYNNITRLYITRPGAIVGHLRSNNARLRDVVNDPQQVLD 336

[Close]

BLAST of PI0028378.1 vs. NCBI nr
Match: KAA0040476.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa] >TYK23484.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 285.4 bits (729), Expect = 5.1e-73
Identity = 141/228 (61.84%), Postives = 163/228 (71.49%), Query Frame = 0


Query: 1   MGGSLFSNKSDRYVHLMFLALLGDLHEAGRYSWGGACLAWLYRQLCKAAKRDIREITGPL 60
           MGGS+F++KS RYVHLMFL  L +LH  GRYSWGGACLAWLYRQLCKA+K+ +REI GPL
Sbjct: 610 MGGSIFADKSTRYVHLMFLPFLANLHHTGRYSWGGACLAWLYRQLCKASKQGVREIAGPL 669

Query: 61  ILLQIWAWERFPTMAPQLRHANDHLLFERAHGSRDWSDKVAHLVVRWQSRRRFIATGASI 120
           ILLQIWAWERFP +APQL H N + L  R +GS                 RRF ATG  I
Sbjct: 670 ILLQIWAWERFPIVAPQLLHVNGNQLHSRTYGS-----------------RRFTATGPPI 729

Query: 121 QQFDQDVTQEYIHWYNNITRLYITRPRAVVGHLRSNNRRLRDVADDPQQVLDICNNNERY 180
           +QFD DVTQEYIHWY NI  LYIT+P   + HLRSNN RL +VADDPQQVL+ICN+NE+Y
Sbjct: 730 EQFDMDVTQEYIHWYKNINNLYITQPGVAMSHLRSNNIRLWNVADDPQQVLNICNDNEQY 789

Query: 181 MEEIHYMYDVPIVPPPVNRGRVRVEEPELRVDDDHLNSESTRVPTRTR 229
           ME IHYMYDVPIVP PV + R  V+EP+   + D    E   VP  T+
Sbjct: 790 MENIHYMYDVPIVPAPVQKRRPLVQEPDQLEEVDQHEEE---VPPMTQ 817

[Close]

BLAST of PI0028378.1 vs. TAIR 10
Match: AT1G48120.1 (hydrolases;protein serine/threonine phosphatases )

HSP 1 Score: 86.3 bits (212), Expect = 4.3e-17
Identity = 40/76 (52.63%), Postives = 49/76 (64.47%), Query Frame = 0


Query: 1   MGGSLFSNKSDRYVHLMFLALLGDLHEAGRYSWGGACLAWLYRQLCKAAKRDIREITGPL 60
           M G L+ +KS   V L FL LL D  E  + SWG A LA LYR+LC+A+KR +  I GPL
Sbjct: 189 MSGFLYGDKSKHDVALTFLPLLRDFDEVAKLSWGSATLALLYRELCRASKRTVSTICGPL 248

Query: 61  ILLQIWAWERFPTMAP 77
           +LLQ+WAWER     P
Sbjct: 249 VLLQLWAWERLHVGRP 264

[Close]

BLAST of PI0028378.1 vs. TAIR 10
Match: AT2G04865.1 (Aminotransferase-like, plant mobile domain family protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-09
Identity = 30/84 (35.71%), Postives = 45/84 (53.57%), Query Frame = 0


Query: 1   MGGSLFSNKSDRYVHLMFLALLGDLHEAGRYSWGGACLAWLYRQLCKAAKRDIREITGPL 60
           +G ++FS  +   V +M+L L  D  +AG ++WG A LA+LYR L  A+ +    I G L
Sbjct: 182 VGSTIFSTTTGNKVPVMYLPLFEDFDDAGTFAWGAAALAFLYRALGNASVKSQSTICGCL 241

Query: 61  ILLQIWAWERFPTMAPQLRHANDH 85
            LLQ W++       P+L     H
Sbjct: 242 TLLQCWSYYHLNIGRPKLNREPIH 265

[Close]

BLAST of PI0028378.1 vs. TAIR 10
Match: AT2G25010.1 (Aminotransferase-like, plant mobile domain family protein )

HSP 1 Score: 60.5 bits (145), Expect = 2.5e-09
Identity = 35/99 (35.35%), Postives = 50/99 (50.51%), Query Frame = 0


Query: 1   MGGSLFSNKSDRYVHLMFLALLGDLHEAGRYSWGGACLAWLYRQLCKAAKRDIREITGPL 60
           +G ++F+      V + +L L  D  +AGRY+WG A LA LYR L  A+ +    I G L
Sbjct: 184 IGSTIFATTDGDKVSVKYLPLFEDFDQAGRYAWGAAALACLYRALGNASLKSQSNICGCL 243

Query: 61  ILLQIWAWERFPTMAPQLRHANDHL-LFERAHGSRDWSD 99
            LLQ W++       P+   A   L L  +  GSR  +D
Sbjct: 244 TLLQCWSYFHLDIGRPEKSEACFPLALLWKGKGSRSKTD 282

[Close]

BLAST of PI0028378.1 vs. TAIR 10
Match: AT1G17930.1 (Aminotransferase-like, plant mobile domain family protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-08
Identity = 26/68 (38.24%), Postives = 41/68 (60.29%), Query Frame = 0


Query: 1   MGGSLFSNKSDRYVHLMFLALLGDLHEAGRYSWGGACLAWLYRQLCKAAKRDIREITGPL 60
           +G ++F+      + + +L L  D  +AG Y+WG A LA+LYRQ+  A++R    I G L
Sbjct: 172 VGSTIFATTDPSKISVDYLILFEDFEKAGEYAWGAAALAFLYRQIGNASQRSQSIIGGCL 231

Query: 61  ILLQIWAW 69
            LLQ W++
Sbjct: 232 TLLQCWSY 239

The following BLAST results are available for this feature:

BLAST of PI0028378.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LNG5	6.0e-16	52.63	Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana...	[more]
F4IFD0	2.7e-08	35.71	Protein MAIN-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=At2g04865 PE=1 SV=1	[more]
Q9SK32	3.5e-08	35.35	Protein MAIN-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=MAIL1 PE=1 SV=1	[more]
Q9LMT7	2.3e-07	38.24	Protein MAINTENANCE OF MERISTEMS OS=Arabidopsis thaliana OX=3702 GN=MAIN PE=1 SV...	[more]

BLAST of PI0028378.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DUI1	7.0e-76	50.83	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A5D3BAB0	2.0e-75	47.75	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5A7T598	2.0e-75	47.75	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5D3DJV7	7.7e-75	53.72	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5D3DIM2	2.5e-73	61.84	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]

BLAST of PI0028378.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK27427.1	1.4e-75	50.83	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]
KAA0036767.1	4.2e-75	47.75	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
TYJ95836.1	4.2e-75	47.75	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
TYK23842.1	1.6e-74	53.72	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
KAA0040476.1	5.1e-73	61.84	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]

BLAST of PI0028378.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48120.1	4.3e-17	52.63	hydrolases;protein serine/threonine phosphatases	[more]
AT2G04865.1	1.9e-09	35.71	Aminotransferase-like, plant mobile domain family protein	[more]
AT2G25010.1	2.5e-09	35.35	Aminotransferase-like, plant mobile domain family protein	[more]
AT1G17930.1	1.6e-08	38.24	Aminotransferase-like, plant mobile domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019557	Aminotransferase-like, plant mobile domain	PFAM	PF10536	PMD	coord: 2..134 e-value: 2.0E-21 score: 76.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..236
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..250
None	No IPR available	PANTHER	PTHR46033:SF8	SERINE/THREONINE-PROTEIN PHOSPHATASE 7 LONG FORM HOMOLOG ISOFORM X1	coord: 2..134
IPR044824	Protein MAINTENANCE OF MERISTEMS-like	PANTHER	PTHR46033	PROTEIN MAIN-LIKE 2	coord: 2..134

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0028378	PI0028378	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0028378.1-exon	PI0028378.1-exon-chr06:18692928..18693293	exon
PI0028378.1-exon	PI0028378.1-exon-chr06:18693372..18693549	exon
PI0028378.1-exon	PI0028378.1-exon-chr06:18694035..18694315	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0028378.1-cds	PI0028378.1-cds-chr06:18692928..18693293	CDS
PI0028378.1-cds	PI0028378.1-cds-chr06:18693372..18693549	CDS
PI0028378.1-cds	PI0028378.1-cds-chr06:18694035..18694315	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0028378.1	PI0028378.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048507	meristem development
biological_process	GO:0010073	meristem maintenance