PI0026870.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0026870.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	LEA_2 domain-containing protein
Location	chr12: 19605807 .. 19607306 (-)
Sequence length	911
RNA-Seq Expression	PI0026870.1
Synteny	PI0026870.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAACCCTAATTCAAAATAGAGAACATATTCCTCTACCCATCATCAAGCAAACCAAAATAGTACACATACACACAGTTCTTATACTCATCAATATAATATATCATCCCTTCACTTAAACATCAAAAAACAAATATCAAAACCACCAAAAGTAAAAAAGTGGTGAAGAAAAAACAGATGAGGAGCATTGCTACCCAAGGAGCAGGATCATCTTCATCAGCAAAAGAAATATCCTATGTACAAAAACATGGTGCAGCAAAAAGAACAAGGGTGTTGAGAATCACAGGAAGAACCTTATTGGGTTTAATGATTCTTGTGGGTATTGCAATGATTGTATGTTGGCTTGTTGTGTTTCCCAAAACCCCAGATCTCATTGTGGAAACTGGCCAAGTTATACCCCATAGTTTAACTGATAGAAAGTTGAATGCTACCATAGCTTTTACTGTTGTAAGCTATAACCCTAACCAAAGAGCCTCCATTCGTATGGATTCTATGAGGATGACAGTTAGTGATATGGGGTTGTCGTTTTGGTCCGACATCCCCAGCTTCACCCAGCCACCGAAAAACAAAACCGTCTTGACCTCTGCCATCCAAGGCAACTTCATAAACCCATTTGGGCGCATGAAAGAAAATATGAAGTTGGATGGGATCAGTCCGAAGCTTCACTTCTCGGCCAAAGTCAGGTACAATATTACACTTTTAGTCCCACCATTTTAAAAAAAATCTTAAATTTAGTACCTCAAAATTAATTTCTTCCGAATTTGGTTAAATAACAATAATAGTTTCCATATTCATCAAAGTAAGGATTTTTATGTTTTCCGACATTTATAATAAAAATGTTAATATATAAGAAAAAGCTTTTTTAAAAAATCAACAATAAACTAAAAGAGGTGATTTGCATAAACTAAAATTAGTCAATTGAAATTACACGGACTAAAATGGAACAACTTCAAACTATAGTGATCATAATAGTATTTTAACATTTTTATTCCCCAAAATTATTTTTCAGTTGAGAGCCGAAAAGAACAACTTTATTTTTCATCAATTTTAACCTAATACCCTTTTTCTTTTACGTTTTAACTTAAACTACTAACGTGATGACTATTTTTTTTTTGTTTTGTTTTTAGATTTTGATATTTAAGCTTATGAACGTTACTTTTAAAATATAGATATATATTTTGTTGTTTATAAATGTTTTCATAAGCTAAGTTAATTTTAAGTTTTTTAATATATAGATTTTGGTCTAAAAAATTTTTGGTGGGTCCTTATCAGTTACATTATGGAGAGATGGGCATCGAGAGGTCGGGTGGTGGAGATCTATTGTGGTAGCCTTAGGCTTAAGTTCAATGATTCTACAACTTTTGATAATAAAAAGTGCGATGTTGATATTTGAGATTTTCCATGTTGTAATTGTGTTCTTTCTCAATAATGATCCCAAAGATTTGTAACACAAAGTTTTAATTGTGTTATTTTTATGAATAGAAAGAGTTCTTGTAATTA

mRNA sequence

CAAAAACCCTAATTCAAAATAGAGAACATATTCCTCTACCCATCATCAAGCAAACCAAAATAGTACACATACACACAGTTCTTATACTCATCAATATAATATATCATCCCTTCACTTAAACATCAAAAAACAAATATCAAAACCACCAAAAGTAAAAAAGTGGTGAAGAAAAAACAGATGAGGAGCATTGCTACCCAAGGAGCAGGATCATCTTCATCAGCAAAAGAAATATCCTATGTACAAAAACATGGTGCAGCAAAAAGAACAAGGGTGTTGAGAATCACAGGAAGAACCTTATTGGGTTTAATGATTCTTGTGGGTATTGCAATGATTGTATGTTGGCTTGTTGTGTTTCCCAAAACCCCAGATCTCATTGTGGAAACTGGCCAAGTTATACCCCATAGTTTAACTGATAGAAAGTTGAATGCTACCATAGCTTTTACTGTTGTAAGCTATAACCCTAACCAAAGAGCCTCCATTCGTATGGATTCTATGAGGATGACAGTTAGTGATATGGGGTTGTCGTTTTGGTCCGACATCCCCAGCTTCACCCAGCCACCGAAAAACAAAACCGTCTTGACCTCTGCCATCCAAGGCAACTTCATAAACCCATTTGGGCGCATGAAAGAAAATATGAAGTTGGATGGGATCAGTCCGAAGCTTCACTTCTCGGCCAAAGTCAGTTACATTATGGAGAGATGGGCATCGAGAGGTCGGGTGGTGGAGATCTATTGTGGTAGCCTTAGGCTTAAGTTCAATGATTCTACAACTTTTGATAATAAAAAGTGCGATGTTGATATTTGAGATTTTCCATGTTGTAATTGTGTTCTTTCTCAATAATGATCCCAAAGATTTGTAACACAAAGTTTTAATTGTGTTATTTTTATGAATAGAAAGAGTTCTTGTAATTA

Coding sequence (CDS)

ATGAGGAGCATTGCTACCCAAGGAGCAGGATCATCTTCATCAGCAAAAGAAATATCCTATGTACAAAAACATGGTGCAGCAAAAAGAACAAGGGTGTTGAGAATCACAGGAAGAACCTTATTGGGTTTAATGATTCTTGTGGGTATTGCAATGATTGTATGTTGGCTTGTTGTGTTTCCCAAAACCCCAGATCTCATTGTGGAAACTGGCCAAGTTATACCCCATAGTTTAACTGATAGAAAGTTGAATGCTACCATAGCTTTTACTGTTGTAAGCTATAACCCTAACCAAAGAGCCTCCATTCGTATGGATTCTATGAGGATGACAGTTAGTGATATGGGGTTGTCGTTTTGGTCCGACATCCCCAGCTTCACCCAGCCACCGAAAAACAAAACCGTCTTGACCTCTGCCATCCAAGGCAACTTCATAAACCCATTTGGGCGCATGAAAGAAAATATGAAGTTGGATGGGATCAGTCCGAAGCTTCACTTCTCGGCCAAAGTCAGTTACATTATGGAGAGATGGGCATCGAGAGGTCGGGTGGTGGAGATCTATTGTGGTAGCCTTAGGCTTAAGTTCAATGATTCTACAACTTTTGATAATAAAAAGTGCGATGTTGATATTTGA

Protein sequence

MRSIATQGAGSSSSAKEISYVQKHGAAKRTRVLRITGRTLLGLMILVGIAMIVCWLVVFPKTPDLIVETGQVIPHSLTDRKLNATIAFTVVSYNPNQRASIRMDSMRMTVSDMGLSFWSDIPSFTQPPKNKTVLTSAIQGNFINPFGRMKENMKLDGISPKLHFSAKVSYIMERWASRGRVVEIYCGSLRLKFNDSTTFDNKKCDVDI

Homology

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BLAST of PI0026870.1 vs. ExPASy Swiss-Prot
Match: Q8VZ13 (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.7e-08
Identity = 48/170 (28.24%), Postives = 84/170 (49.41%), Query Frame = 0


Query: 35  ITGRTLLGLMILVGIAMIVCWLVVFPKTPDLIVETGQVIPHSL--TDRKLNATIAFTVVS 94
           I    LLGL  LVG+A+++ +L + PK     VE   V   ++   D  +NA  ++ + S
Sbjct: 41  IVALVLLGL--LVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKS 100

Query: 95  YNPNQRASIRMDSMRMTVSDMGLSF-WSDIPSFTQPPKNKT-VLTSAIQGNF-INPFGR- 154
           YNP +  S+R  SMR++ +    S    +I  F Q PKN+T + T  +  N  ++ F   
Sbjct: 101 YNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNAR 160

Query: 155 -MKENMKLDGISPKLHFSAKVSYIMERWASRGRVVEIYCGSLRLKFNDST 198
            ++       I  +++ +A+VSY    + SR R ++  C  + +    S+
Sbjct: 161 DLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSS 208

[Close]

BLAST of PI0026870.1 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 6.6e-07
Identity = 51/202 (25.25%), Postives = 88/202 (43.56%), Query Frame = 0


Query: 20  YVQKHGAAKRTRVLRITGRTLLGLMILVGIAMIVCWLVVFPKTPDLIVETGQV--IPHSL 79
           Y + HG      +L +  + ++ L++++G+A ++ WL+V P+     V    +    H+ 
Sbjct: 25  YRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTS 84

Query: 80  TDRKLNATIAFTVVSYNPNQRASIRMDSMRMTVSDMGLSFWS-DIPSFTQPPKNKTVLTS 139
            D  L   +A TV   NPN+R  +  D +       G  F +  +  F Q  KN TVLT 
Sbjct: 85  PDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTP 144

Query: 140 AIQGNFINPF----GRMKENMKLDGI-SPKLHFSAKVSYIMERWASRGRVVEIYCGSLRL 199
             QG  +  F     R     ++ G+ + ++ F  +V + +     R    ++ C  LRL
Sbjct: 145 TFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRL 204

Query: 200 KFNDS------TTFDNKKCDVD 208
             + S      +T    KCD D
Sbjct: 205 PLSTSNGTTTTSTVFPIKCDFD 226

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BLAST of PI0026870.1 vs. ExPASy TrEMBL
Match: A0A5D3CC54 (Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold534G00190 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 6.7e-95
Identity = 177/208 (85.10%), Postives = 191/208 (91.83%), Query Frame = 0


Query: 1   MRSIATQGAGSSSSAKEISYVQKHGAAKRTRVLRITGRTLLGLMILVGIAMIVCWLVVFP 60
           MRSIATQG  SSSSAKEISYV+KHGAAKRTRVLRITGRTLLGLMILV IAMI+CWL+VFP
Sbjct: 1   MRSIATQGEPSSSSAKEISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFP 60

Query: 61  KTPDLIVETGQVIPHSLTDRKLNATIAFTVVSYNPNQRASIRMDSMRMTVSDMGLSFWSD 120
           + PDLIVETG+VIPHSLTDRKLNATIAFTV SYNPN++ASIRMDSMRM V+DMGLSFWSD
Sbjct: 61  RNPDLIVETGKVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWSD 120

Query: 121 IPSFTQPPKNKTVLTSAIQGNFINPFGRMKENMKLDGISPKLHFSAKVSYIMERWASRGR 180
           IPSFTQPPKNKTVL S IQGNFI PFG MKE +KL+GISP L FSAKVSYIMERW SRGR
Sbjct: 121 IPSFTQPPKNKTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRGR 180

Query: 181 VVEIYCGSLRLKFNDSTTFDNKKCDVDI 209
           ++E+YC SLRLKFNDST FDNKKC VD+
Sbjct: 181 LLEVYCDSLRLKFNDSTVFDNKKCKVDL 208

[Close]

BLAST of PI0026870.1 vs. ExPASy TrEMBL
Match: A0A1S3CGQ5 (uncharacterized protein LOC103500702 OS=Cucumis melo OX=3656 GN=LOC103500702 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 6.7e-95
Identity = 177/208 (85.10%), Postives = 191/208 (91.83%), Query Frame = 0


Query: 1   MRSIATQGAGSSSSAKEISYVQKHGAAKRTRVLRITGRTLLGLMILVGIAMIVCWLVVFP 60
           MRSIATQG  SSSSAKEISYV+KHGAAKRTRVLRITGRTLLGLMILV IAMI+CWL+VFP
Sbjct: 1   MRSIATQGEPSSSSAKEISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFP 60

Query: 61  KTPDLIVETGQVIPHSLTDRKLNATIAFTVVSYNPNQRASIRMDSMRMTVSDMGLSFWSD 120
           + PDLIVETG+VIPHSLTDRKLNATIAFTV SYNPN++ASIRMDSMRM V+DMGLSFWSD
Sbjct: 61  RNPDLIVETGKVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWSD 120

Query: 121 IPSFTQPPKNKTVLTSAIQGNFINPFGRMKENMKLDGISPKLHFSAKVSYIMERWASRGR 180
           IPSFTQPPKNKTVL S IQGNFI PFG MKE +KL+GISP L FSAKVSYIMERW SRGR
Sbjct: 121 IPSFTQPPKNKTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRGR 180

Query: 181 VVEIYCGSLRLKFNDSTTFDNKKCDVDI 209
           ++E+YC SLRLKFNDST FDNKKC VD+
Sbjct: 181 LLEVYCDSLRLKFNDSTVFDNKKCKVDL 208

[Close]

BLAST of PI0026870.1 vs. ExPASy TrEMBL
Match: A0A0A0LSV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G134270 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 7.6e-91
Identity = 169/198 (85.35%), Postives = 182/198 (91.92%), Query Frame = 0


Query: 11  SSSSAKEISYVQKHGAAKRTRVLRITGRTLLGLMILVGIAMIVCWLVVFPKTPDLIVETG 70
           SSSS+KE+SYV KHG AKRTRVLRITGRTLLGLMILV IAMI+CWL+VFP+ PD+IVETG
Sbjct: 15  SSSSSKEMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETG 74

Query: 71  QVIPHSLTDRKLNATIAFTVVSYNPNQRASIRMDSMRMTVSDMGLSFWSDIPSFTQPPKN 130
           QVIPHSLTDRKLNATIAFTV SYNPN++ASIRMDSMRM VSDMGLSFWSDIPSFTQPPKN
Sbjct: 75  QVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKN 134

Query: 131 KTVLTSAIQGNFINPFGRMKENMKLDGISPKLHFSAKVSYIMERWASRGRVVEIYCGSLR 190
           KTVLTS IQGNFI PFG MKE MKL+GISP+L FSAKVSYIMERW SR R+VE+YC SLR
Sbjct: 135 KTVLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLR 194

Query: 191 LKFNDSTTFDNKKCDVDI 209
           LKFNDST FDNKKC VD+
Sbjct: 195 LKFNDSTVFDNKKCKVDL 212

[Close]

BLAST of PI0026870.1 vs. ExPASy TrEMBL
Match: A0A6J1HJ52 (uncharacterized protein At1g08160-like OS=Cucurbita moschata OX=3662 GN=LOC111464936 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.9e-66
Identity = 128/213 (60.09%), Postives = 167/213 (78.40%), Query Frame = 0


Query: 1   MRSIATQGAGSSSSA-----KEISYVQKHGAAKRTRVLRITGRTLLGLMILVGIAMIVCW 60
           MRS   + A SS+++     K  SY Q+HG AKRT+++RI GR+LL +M LVG+A+++CW
Sbjct: 1   MRSNTQEEASSSTTSIIEAPKPSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW 60

Query: 61  LVVFPKTPDLIVETGQVIPHSLTDRKLNATIAFTVVSYNPNQRASIRMDSMRMTVSDMGL 120
           LVVFPKTP+LI+E G V PHSLTDRKLNA+I+FT+ SYNPN+RASI MDSM+MT+ DMG 
Sbjct: 61  LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ 120

Query: 121 SFWSDIPSFTQPPKNKTVLTSAIQGNFINPFGRMKENMKLDGISPKLHFSAKVSYIMERW 180
           +F + IP+FTQPP N+T L   ++ NFI PFG+MK+ M  DG++P+LHFSA VSYI+E+W
Sbjct: 121 TFITTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKW 180

Query: 181 ASRGRVVEIYCGSLRLKFNDSTTFDNKKCDVDI 209
           AS+ R +EIYC  +RLK N ST FDN KC VD+
Sbjct: 181 ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 213

[Close]

BLAST of PI0026870.1 vs. ExPASy TrEMBL
Match: A0A6J1I0B9 (uncharacterized protein At1g08160-like OS=Cucurbita maxima OX=3661 GN=LOC111469334 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.4e-65
Identity = 127/209 (60.77%), Postives = 163/209 (77.99%), Query Frame = 0


Query: 6   TQGAGSSSSAKEIS------YVQKHGAAKRTRVLRITGRTLLGLMILVGIAMIVCWLVVF 65
           TQG  SSSS   I       Y Q+HG AKRT+++RI GR+LL +M LVG+A+++CWLVVF
Sbjct: 5   TQGEASSSSTSIIEAPKPSYYAQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVF 64

Query: 66  PKTPDLIVETGQVIPHSLTDRKLNATIAFTVVSYNPNQRASIRMDSMRMTVSDMGLSFWS 125
           PKTP+LI+E G V PHSLTDRKLNA+I+FT+ SYNPN+RASI MDSM+MT+ DMG +F +
Sbjct: 65  PKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFIT 124

Query: 126 DIPSFTQPPKNKTVLTSAIQGNFINPFGRMKENMKLDGISPKLHFSAKVSYIMERWASRG 185
            IP+FTQ P N+T LT  ++ NFI PFG+MK+ M  +G++P+LHFSA VSYI+E+WAS+ 
Sbjct: 125 TIPTFTQLPGNQTFLTPTVEVNFIYPFGQMKDLMLSNGLNPELHFSAHVSYIVEKWASKR 184

Query: 186 RVVEIYCGSLRLKFNDSTTFDNKKCDVDI 209
           R +EIYC  +RLK N ST FDN KC VD+
Sbjct: 185 RSLEIYCDRVRLKINGSTPFDNTKCKVDL 213

[Close]

BLAST of PI0026870.1 vs. NCBI nr
Match: XP_008462326.1 (PREDICTED: uncharacterized protein LOC103500702 [Cucumis melo] >KAA0040683.1 protein YLS9-like [Cucumis melo var. makuwa] >TYK08768.1 protein YLS9-like [Cucumis melo var. makuwa])

HSP 1 Score: 356.7 bits (914), Expect = 1.4e-94
Identity = 177/208 (85.10%), Postives = 191/208 (91.83%), Query Frame = 0


Query: 1   MRSIATQGAGSSSSAKEISYVQKHGAAKRTRVLRITGRTLLGLMILVGIAMIVCWLVVFP 60
           MRSIATQG  SSSSAKEISYV+KHGAAKRTRVLRITGRTLLGLMILV IAMI+CWL+VFP
Sbjct: 1   MRSIATQGEPSSSSAKEISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFP 60

Query: 61  KTPDLIVETGQVIPHSLTDRKLNATIAFTVVSYNPNQRASIRMDSMRMTVSDMGLSFWSD 120
           + PDLIVETG+VIPHSLTDRKLNATIAFTV SYNPN++ASIRMDSMRM V+DMGLSFWSD
Sbjct: 61  RNPDLIVETGKVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWSD 120

Query: 121 IPSFTQPPKNKTVLTSAIQGNFINPFGRMKENMKLDGISPKLHFSAKVSYIMERWASRGR 180
           IPSFTQPPKNKTVL S IQGNFI PFG MKE +KL+GISP L FSAKVSYIMERW SRGR
Sbjct: 121 IPSFTQPPKNKTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRGR 180

Query: 181 VVEIYCGSLRLKFNDSTTFDNKKCDVDI 209
           ++E+YC SLRLKFNDST FDNKKC VD+
Sbjct: 181 LLEVYCDSLRLKFNDSTVFDNKKCKVDL 208

[Close]

BLAST of PI0026870.1 vs. NCBI nr
Match: XP_004139454.1 (uncharacterized protein LOC101218532 [Cucumis sativus] >KGN64868.1 hypothetical protein Csa_022755 [Cucumis sativus])

HSP 1 Score: 343.2 bits (879), Expect = 1.6e-90
Identity = 169/198 (85.35%), Postives = 182/198 (91.92%), Query Frame = 0


Query: 11  SSSSAKEISYVQKHGAAKRTRVLRITGRTLLGLMILVGIAMIVCWLVVFPKTPDLIVETG 70
           SSSS+KE+SYV KHG AKRTRVLRITGRTLLGLMILV IAMI+CWL+VFP+ PD+IVETG
Sbjct: 15  SSSSSKEMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETG 74

Query: 71  QVIPHSLTDRKLNATIAFTVVSYNPNQRASIRMDSMRMTVSDMGLSFWSDIPSFTQPPKN 130
           QVIPHSLTDRKLNATIAFTV SYNPN++ASIRMDSMRM VSDMGLSFWSDIPSFTQPPKN
Sbjct: 75  QVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKN 134

Query: 131 KTVLTSAIQGNFINPFGRMKENMKLDGISPKLHFSAKVSYIMERWASRGRVVEIYCGSLR 190
           KTVLTS IQGNFI PFG MKE MKL+GISP+L FSAKVSYIMERW SR R+VE+YC SLR
Sbjct: 135 KTVLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLR 194

Query: 191 LKFNDSTTFDNKKCDVDI 209
           LKFNDST FDNKKC VD+
Sbjct: 195 LKFNDSTVFDNKKCKVDL 212

[Close]

BLAST of PI0026870.1 vs. NCBI nr
Match: XP_038895440.1 (uncharacterized protein LOC120083674 [Benincasa hispida])

HSP 1 Score: 303.1 bits (775), Expect = 1.8e-78
Identity = 152/208 (73.08%), Postives = 175/208 (84.13%), Query Frame = 0


Query: 1   MRSIATQGAGSSSSAKEISYVQKHGAAKRTRVLRITGRTLLGLMILVGIAMIVCWLVVFP 60
           MR    QG  SSSS KE SYVQ+HG AKRT++LRITGR+LLG+MILVGI +I+CWL+VFP
Sbjct: 1   MRGTTIQGEASSSS-KESSYVQEHGTAKRTKLLRITGRSLLGIMILVGIGIIICWLIVFP 60

Query: 61  KTPDLIVETGQVIPHSLTDRKLNATIAFTVVSYNPNQRASIRMDSMRMTVSDMGLSFWSD 120
           KTP+L VE+GQVIPH LTDRKL ATIAFTV SYNPN+RA+I MDSM M V+DMG +F S 
Sbjct: 61  KTPNLTVESGQVIPHRLTDRKLQATIAFTVKSYNPNKRATIHMDSMMMIVTDMGQTFASV 120

Query: 121 IPSFTQPPKNKTVLTSAIQGNFINPFGRMKENMKLDGISPKLHFSAKVSYIMERWASRGR 180
           IP+FTQPP N+TV TSAIQGNFI PFG MKE +K +GISP L FSAKVSYIM+RW S+ R
Sbjct: 121 IPNFTQPPGNQTVWTSAIQGNFIYPFGHMKEFVKAEGISPDLRFSAKVSYIMKRWTSKAR 180

Query: 181 VVEIYCGSLRLKFNDSTTFDNKKCDVDI 209
           ++EIYCG LRLKFNDST FDNKKC VD+
Sbjct: 181 ILEIYCGGLRLKFNDSTPFDNKKCTVDL 207

[Close]

BLAST of PI0026870.1 vs. NCBI nr
Match: XP_022964992.1 (uncharacterized protein At1g08160-like [Cucurbita moschata] >KAG6583594.1 NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019294.1 NDR1/HIN1-like protein 10 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 261.5 bits (667), Expect = 6.0e-66
Identity = 128/213 (60.09%), Postives = 167/213 (78.40%), Query Frame = 0


Query: 1   MRSIATQGAGSSSSA-----KEISYVQKHGAAKRTRVLRITGRTLLGLMILVGIAMIVCW 60
           MRS   + A SS+++     K  SY Q+HG AKRT+++RI GR+LL +M LVG+A+++CW
Sbjct: 1   MRSNTQEEASSSTTSIIEAPKPSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW 60

Query: 61  LVVFPKTPDLIVETGQVIPHSLTDRKLNATIAFTVVSYNPNQRASIRMDSMRMTVSDMGL 120
           LVVFPKTP+LI+E G V PHSLTDRKLNA+I+FT+ SYNPN+RASI MDSM+MT+ DMG 
Sbjct: 61  LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ 120

Query: 121 SFWSDIPSFTQPPKNKTVLTSAIQGNFINPFGRMKENMKLDGISPKLHFSAKVSYIMERW 180
           +F + IP+FTQPP N+T L   ++ NFI PFG+MK+ M  DG++P+LHFSA VSYI+E+W
Sbjct: 121 TFITTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKW 180

Query: 181 ASRGRVVEIYCGSLRLKFNDSTTFDNKKCDVDI 209
           AS+ R +EIYC  +RLK N ST FDN KC VD+
Sbjct: 181 ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 213

[Close]

BLAST of PI0026870.1 vs. NCBI nr
Match: XP_023520091.1 (uncharacterized protein At1g08160-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.2 bits (666), Expect = 7.9e-66
Identity = 127/209 (60.77%), Postives = 163/209 (77.99%), Query Frame = 0


Query: 6   TQGAGSSSSA------KEISYVQKHGAAKRTRVLRITGRTLLGLMILVGIAMIVCWLVVF 65
           TQG  SSS+       K  SY  +HG AKRT+++RI GR+LL +M LVG+A+++CWLVVF
Sbjct: 5   TQGEASSSTTSIIEAPKPSSYGHQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVF 64

Query: 66  PKTPDLIVETGQVIPHSLTDRKLNATIAFTVVSYNPNQRASIRMDSMRMTVSDMGLSFWS 125
           PKTP+LI+E G V PHSLTDRKLNA+I+FT+ SYNPN+RASI MDSM+MT+ DMG +F +
Sbjct: 65  PKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFTT 124

Query: 126 DIPSFTQPPKNKTVLTSAIQGNFINPFGRMKENMKLDGISPKLHFSAKVSYIMERWASRG 185
            IP+FTQPP N+T L   ++ NFI PFG+MK+ M  DG++P+LHFSA VSYI+E+WAS+ 
Sbjct: 125 TIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKWASKR 184

Query: 186 RVVEIYCGSLRLKFNDSTTFDNKKCDVDI 209
           R +EIYC  +RLK N ST FDN KC VD+
Sbjct: 185 RSLEIYCDRVRLKINGSTPFDNTKCKVDL 213

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BLAST of PI0026870.1 vs. TAIR 10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-10
Identity = 48/177 (27.12%), Postives = 79/177 (44.63%), Query Frame = 0


Query: 40  LLGLMILVGIAMIVCWLVVFPKTPDLIVETGQVIPHSLT-DRKLNATIAFTVVSYNPNQR 99
           +L L+ +  +  ++ WL   PK     VE   V   +LT D  ++AT  FT+ S+NPN R
Sbjct: 33  ILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATFQFTIQSHNPNHR 92

Query: 100 ASIRMDSMRMTV--SDMGLSFWSDIPSFTQPPKN-----KTVLTSAIQGNFINPFGRMKE 159
            S+   S+ + V   D  L+F   +  F QP  N     +T++   +  +  N      +
Sbjct: 93  ISVYYSSVEIFVKFKDQTLAF-DTVEPFHQPRMNVKQIDETLIAENVAVSKSNGKDLRSQ 152

Query: 160 NMKLDGISPKLHFSAKVSYIMERWASRGRVVEIYCGSLRLKFNDSTTFDNKKCDVDI 209
           N  L  I  ++   A+V + +  W S  R  +I C  + +  +      N  CD DI
Sbjct: 153 N-SLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSLSQPNKSQNSSCDADI 207

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BLAST of PI0026870.1 vs. TAIR 10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-09
Identity = 48/170 (28.24%), Postives = 84/170 (49.41%), Query Frame = 0


Query: 35  ITGRTLLGLMILVGIAMIVCWLVVFPKTPDLIVETGQVIPHSL--TDRKLNATIAFTVVS 94
           I    LLGL  LVG+A+++ +L + PK     VE   V   ++   D  +NA  ++ + S
Sbjct: 41  IVALVLLGL--LVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKS 100

Query: 95  YNPNQRASIRMDSMRMTVSDMGLSF-WSDIPSFTQPPKNKT-VLTSAIQGNF-INPFGR- 154
           YNP +  S+R  SMR++ +    S    +I  F Q PKN+T + T  +  N  ++ F   
Sbjct: 101 YNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNAR 160

Query: 155 -MKENMKLDGISPKLHFSAKVSYIMERWASRGRVVEIYCGSLRLKFNDST 198
            ++       I  +++ +A+VSY    + SR R ++  C  + +    S+
Sbjct: 161 DLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSS 208

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BLAST of PI0026870.1 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 55.8 bits (133), Expect = 4.7e-08
Identity = 51/202 (25.25%), Postives = 88/202 (43.56%), Query Frame = 0


Query: 20  YVQKHGAAKRTRVLRITGRTLLGLMILVGIAMIVCWLVVFPKTPDLIVETGQV--IPHSL 79
           Y + HG      +L +  + ++ L++++G+A ++ WL+V P+     V    +    H+ 
Sbjct: 25  YRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTS 84

Query: 80  TDRKLNATIAFTVVSYNPNQRASIRMDSMRMTVSDMGLSFWS-DIPSFTQPPKNKTVLTS 139
            D  L   +A TV   NPN+R  +  D +       G  F +  +  F Q  KN TVLT 
Sbjct: 85  PDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTP 144

Query: 140 AIQGNFINPF----GRMKENMKLDGI-SPKLHFSAKVSYIMERWASRGRVVEIYCGSLRL 199
             QG  +  F     R     ++ G+ + ++ F  +V + +     R    ++ C  LRL
Sbjct: 145 TFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRL 204

Query: 200 KFNDS------TTFDNKKCDVD 208
             + S      +T    KCD D
Sbjct: 205 PLSTSNGTTTTSTVFPIKCDFD 226

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BLAST of PI0026870.1 vs. TAIR 10
Match: AT4G01410.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 45.1 bits (105), Expect = 8.2e-05
Identity = 43/153 (28.10%), Postives = 72/153 (47.06%), Query Frame = 0


Query: 7   QGAGSSSSAKEISYVQKHGAAKRTRVLRITGRTLLGLMILVGIAMIVCWLVVFPKTPDLI 66
           + A S+SS  E SY ++ G         I G  +  +++++GI  ++ WLV  P  P L 
Sbjct: 17  KNAPSASSTPE-SYSKEGGGGGGDARRAICG-AIFTILVILGIIALILWLVYRPHKPRLT 76

Query: 67  VETGQVIPHSLTDRKLNAT-IAFTVVSYNPNQRASIRMD--SMRMTVSDMGLSFWSDIPS 126
           V    +   + T   L +T + F+V++ NPN+R SI  D  SM +T  D  ++    +P 
Sbjct: 77  VVGAAIYDLNFTAPPLISTSVQFSVLARNPNRRVSIHYDKLSMYVTYKDQIITPPLPLPP 136

Query: 127 FTQPPKNKTVLTSAIQGNFINPFGRMKENMKLD 157
                K+  V+   + GN I     +   +K D
Sbjct: 137 LRLGHKSTVVIAPVMGGNGIPVSPEVANGLKND 167

The following BLAST results are available for this feature:

BLAST of PI0026870.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZ13	2.7e-08	28.24	Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 P...	[more]
Q9SJ52	6.6e-07	25.25	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]

BLAST of PI0026870.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CC54	6.7e-95	85.10	Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold534G00...	[more]
A0A1S3CGQ5	6.7e-95	85.10	uncharacterized protein LOC103500702 OS=Cucumis melo OX=3656 GN=LOC103500702 PE=...	[more]
A0A0A0LSV0	7.6e-91	85.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G134270 PE=4 SV=1	[more]
A0A6J1HJ52	2.9e-66	60.09	uncharacterized protein At1g08160-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1I0B9	1.4e-65	60.77	uncharacterized protein At1g08160-like OS=Cucurbita maxima OX=3661 GN=LOC1114693...	[more]

BLAST of PI0026870.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462326.1	1.4e-94	85.10	PREDICTED: uncharacterized protein LOC103500702 [Cucumis melo] >KAA0040683.1 pro...	[more]
XP_004139454.1	1.6e-90	85.35	uncharacterized protein LOC101218532 [Cucumis sativus] >KGN64868.1 hypothetical ...	[more]
XP_038895440.1	1.8e-78	73.08	uncharacterized protein LOC120083674 [Benincasa hispida]	[more]
XP_022964992.1	6.0e-66	60.09	uncharacterized protein At1g08160-like [Cucurbita moschata] >KAG6583594.1 NDR1/H...	[more]
XP_023520091.1	7.9e-66	60.77	uncharacterized protein At1g08160-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0026870.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22870.1	2.2e-10	27.12	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G08160.1	1.9e-09	28.24	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35980.1	4.7e-08	25.25	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G01410.1	8.2e-05	28.10	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 26..205
None	No IPR available	PANTHER	PTHR31852:SF1	NDR1/HIN1-LIKE PROTEIN 6	coord: 26..205

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0026870	PI0026870	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0026870.1-exon	PI0026870.1-exon-chr12:19605807..19606034	exon
PI0026870.1-exon	PI0026870.1-exon-chr12:19606624..19607306	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0026870.1-three_prime_utr	PI0026870.1-three_prime_utr-chr12:19605807..19605913	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0026870.1-cds	PI0026870.1-cds-chr12:19605914..19606034	CDS
PI0026870.1-cds	PI0026870.1-cds-chr12:19606624..19607129	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0026870.1-five_prime_utr	PI0026870.1-five_prime_utr-chr12:19607130..19607306	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0026870.1	PI0026870.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane