PI0026692.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0026692.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	translation initiation factor IF-2 isoform X1
Location	chr01: 3637379 .. 3640564 (-)
Sequence length	1585
RNA-Seq Expression	PI0026692.1
Synteny	PI0026692.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACAGATAAGAAAACTATTTATATGGAGAGAAAGAAATCTAAAAAGTAGTTTATTTTTTCTTCAATCCCATGGCTTAATAACTATATCCAAATTAAATTCAAGGCTGGCTTAAAAGTTGAATCTATGATCTTCCTTTGACGACACCTCAAAACGGTGTAGTCTTCAACAATCTCCCCATTGCCAAGCAATCCATTTTTCCTTCAACTATAAAATCCCTTCTTTCTCCTTCTTCGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTTAGATCCTCTCAAAAAGTTTCTTAATTCCTTTGTTTCTGATCATACCCACAAATCCCAACAATCTTCAAAGTTCTATATTGGTGGTGGTGGATGGCAAAAACCAACAAATACACCTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCTCCAATTCCAAAACTGGCAACAATCCCTCCTCTAATAAAAACCCATCTTCTTCTTCTTCCTCCTCTTTCGCCACTGCAACTTATTCTTCTATTTCTTCCCCTAACAAGTCCCATGGACGCATGCTTGTCCTGACCCGTCCCACCCCCAGACCCATTACCTCGCCTCAAGCCCTTTCCCCTCAACCCCAGTCTCGACCCTCATCAGCTGATCATCGTCCTGTTCCGTATCAGCCTCGTCCGCAATCCGATTCCGATTCGATCTCTCTTCGCCCTCTCGGTCGGACCGGTGCGGGTGCGATCGCTCCCTCTCCGATTCCGGGGTTGGAGAAGGACAGGGAGATTACTCCTCCGGTTGTGACGTTGCATAAGTCGGAGAAATTTGTGCCACCTCATCTTCGGGCGGGGTTTGTCGGGAAAGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGGGAATCAGAGGCAGTACGGGAATTATGGGTCCTCGAGCCGGTACGGTGAAGATGGGCGGCCGAAATCCGGTGGTGGATATGAGAGGATGAAAGGGGTGGGTGAGGCAGATCTGGGGGCGATGGTGAATCGGCCAAGATCCAGTGGGAATCGGCCGAGTTCTAGTGGATGGTATGTTTCTGTCAAATACTTGCCTTTTTTAAATTCTATGTCTTGGTTAATAATTGGGATTATGGAGCATAAACGTGTTGTTAATCATACTTAAAAATGAACAATTTTGGCCCTGCATTTTGGGTATGGAATTGCCTTCTTTGGATGCCCTTTTACCATGTCACTGAGATTCTGTTGGGCTGTTGGCTATGGCTTTTTAGGAGAGTTTCTCTGTGATGTTATCTCATGATCCTTTTGTCTCAATGAATTGGGATTATTGATAATTTGATACACAAAGGTGTGGTTAATACAGGCACTGGATTTTAGGTATGATATGGACTTGCCTTATTTGAATTCACTTTTATCATGATACTGAGATGCTGTTGGGCCTTTGGCTATGGCTTTTTGATTCTTACGAGACTCTCTTGATGTTTGTTGGATGAATCGATCCGCTTTAATTCCACGATTACAAAGTAGACGGATCCTTCTGTCTCAATGAATTAGGATCATTGATACAAACATGTAGCGAATTTTGGCATTGGATTTTAGGTATGGAAATTGGAATTGCCTTATTGCCTTTTTACCATGAAAGTGAGATGGTCTTGTTTATGGGTTTTTTATTTTTATGAGATTCTCTTGATTCTGAAGAGCTGTCTCATGAATAAATCATAGAGCAGATGGCTCCTTATGTATTCTGGTTTTCAACTGTTGAGTGTTGGCCAATAACGTGTAAGGTTCTCTTAGGAAAGAAGAACATTGGCTGCCTGAGTTGTTTTTCTTTGATTGCAAACCTTTTTTAGAATGCAGAATGTTCTATCAGCATGAAGAGGTTTAACTTTTGGACTTGTGTTTGATTGTTTTCCTCGCTTCGTGTCACTGGCTTGTGACATTTTTATTTAATAAAGGGGTGCTTCATACAGATTTGGGAGTTCTTGTATGTGTAACATGGATTGAAGAAGTTTGAAAACGAGATGATGTGTGAGATGCTTGATTTAGATCGTGTACTGGACGTTCTCTTTGTGGGCTTTACATTTTCATGGTTGAAAATTATGGATTTTGAAGAGATGATGTGATGAATTATACATCTCCAATAGGTCAAACCTTCATAACAGATGCTCTTGATAAAATTTTATGATTCACACGCTTACTTGATGCTCTATTCTATAGGCTGTACAACTGGGTCCTTGAGTTTTAGAGAATTTGATTGGATTGTCGTGCTAAAATGTTGTAAATGTGTTGGCCATTTGAATTTTACCTATAGAGTTAGACCACCTTTTATATCCTTAGACATTTGATTTAATAAATGCACCGCACCCTCCTCTCCCATCACACACAAACTTGCTTACAAATGCCAAACTGAGGTTAGCTCAATCGTTATTGACATGACCTTTCTCCTTAGTAGTTGGTGATTTGATCCCCCACCTTGCGGTTGTACTAAAAAAAATGCTCATACATTACTCCCTGGGCCGATTCGTTAGACTTAACAAAAATATTGAACTTGCTTTTGTTCATATGATAAACTTCCTCTAGTAAATAATGCTTTCATTCATATTTCTTCACGAAAGGTATCAATTTGTGTTCTCACTGATTTTTATGGTTGGCAACAAATTGTGCTCAAACAGATTCATTCTGAAGTTGGATACTTTTCCAAGGATGAAGATGGTTTACATTTGAATCACAAGCCATGCTGCTCAGCACCCATCTTTTATCTTTCTGGAATTGGCATTCGTCATCAGAACTTTTATTTTTATTTTTTAGATTTCATAGTCATGGAAGATGAACAGAAACCCACCAAGGTGACAAGATCTCAACAATGAAGTGACATACTTCAAATTCAGATTGTTAATACCCCAAGGAAATGAAGTTTCAGCATTCAAGCCCTTTACTGATTGGTAGTTTGGCTTCTTCACCCCCTCTTCTGTATTTATGAAAGGGAAAGAAGATTGTTTTGGAATGTAGAACTGACCAAGTGTTATGCATTGTCGTCCTCGCCCTTGTCGTTTAACTGCTTTTAGATCAGTCTTAGCATCTTTTGTGGAGGATGCTCTTGTGTTTTTCAGTTTTCATCTAAGTTTGTAAAATAAAGAGTCTTCTTGTGTGAGGATATTATCAGGTTTCATTCAGTTTATAATGAAATGGCCATTCTAATGCAA

mRNA sequence

AAAACAGATAAGAAAACTATTTATATGGAGAGAAAGAAATCTAAAAAGTAGTTTATTTTTTCTTCAATCCCATGGCTTAATAACTATATCCAAATTAAATTCAAGGCTGGCTTAAAAGTTGAATCTATGATCTTCCTTTGACGACACCTCAAAACGGTGTAGTCTTCAACAATCTCCCCATTGCCAAGCAATCCATTTTTCCTTCAACTATAAAATCCCTTCTTTCTCCTTCTTCGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTTAGATCCTCTCAAAAAGTTTCTTAATTCCTTTGTTTCTGATCATACCCACAAATCCCAACAATCTTCAAAGTTCTATATTGGTGGTGGTGGATGGCAAAAACCAACAAATACACCTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCTCCAATTCCAAAACTGGCAACAATCCCTCCTCTAATAAAAACCCATCTTCTTCTTCTTCCTCCTCTTTCGCCACTGCAACTTATTCTTCTATTTCTTCCCCTAACAAGTCCCATGGACGCATGCTTGTCCTGACCCGTCCCACCCCCAGACCCATTACCTCGCCTCAAGCCCTTTCCCCTCAACCCCAGTCTCGACCCTCATCAGCTGATCATCGTCCTGTTCCGTATCAGCCTCGTCCGCAATCCGATTCCGATTCGATCTCTCTTCGCCCTCTCGGTCGGACCGGTGCGGGTGCGATCGCTCCCTCTCCGATTCCGGGGTTGGAGAAGGACAGGGAGATTACTCCTCCGGTTGTGACGTTGCATAAGTCGGAGAAATTTGTGCCACCTCATCTTCGGGCGGGGTTTGTCGGGAAAGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGGGAATCAGAGGCAGTACGGGAATTATGGGTCCTCGAGCCGGTACGGTGAAGATGGGCGGCCGAAATCCGGTGGTGGATATGAGAGGATGAAAGGGGTGGGTGAGGCAGATCTGGGGGCGATGGTGAATCGGCCAAGATCCAGTGGGAATCGGCCGAGTTCTAGTGGATGATTCATTCTGAAGTTGGATACTTTTCCAAGGATGAAGATGGTTTACATTTGAATCACAAGCCATGCTGCTCAGCACCCATCTTTTATCTTTCTGGAATTGGCATTCGTCATCAGAACTTTTATTTTTATTTTTTAGATTTCATAGTCATGGAAGATGAACAGAAACCCACCAAGGTGACAAGATCTCAACAATGAAGTGACATACTTCAAATTCAGATTGTTAATACCCCAAGGAAATGAAGTTTCAGCATTCAAGCCCTTTACTGATTGGTAGTTTGGCTTCTTCACCCCCTCTTCTGTATTTATGAAAGGGAAAGAAGATTGTTTTGGAATGTAGAACTGACCAAGTGTTATGCATTGTCGTCCTCGCCCTTGTCGTTTAACTGCTTTTAGATCAGTCTTAGCATCTTTTGTGGAGGATGCTCTTGTGTTTTTCAGTTTTCATCTAAGTTTGTAAAATAAAGAGTCTTCTTGTGTGAGGATATTATCAGGTTTCATTCAGTTTATAATGAAATGGCCATTCTAATGCAA

Coding sequence (CDS)

ATGGCAAAAACCAACAAATACACCTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCTCCAATTCCAAAACTGGCAACAATCCCTCCTCTAATAAAAACCCATCTTCTTCTTCTTCCTCCTCTTTCGCCACTGCAACTTATTCTTCTATTTCTTCCCCTAACAAGTCCCATGGACGCATGCTTGTCCTGACCCGTCCCACCCCCAGACCCATTACCTCGCCTCAAGCCCTTTCCCCTCAACCCCAGTCTCGACCCTCATCAGCTGATCATCGTCCTGTTCCGTATCAGCCTCGTCCGCAATCCGATTCCGATTCGATCTCTCTTCGCCCTCTCGGTCGGACCGGTGCGGGTGCGATCGCTCCCTCTCCGATTCCGGGGTTGGAGAAGGACAGGGAGATTACTCCTCCGGTTGTGACGTTGCATAAGTCGGAGAAATTTGTGCCACCTCATCTTCGGGCGGGGTTTGTCGGGAAAGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGGGAATCAGAGGCAGTACGGGAATTATGGGTCCTCGAGCCGGTACGGTGAAGATGGGCGGCCGAAATCCGGTGGTGGATATGAGAGGATGAAAGGGGTGGGTGAGGCAGATCTGGGGGCGATGGTGAATCGGCCAAGATCCAGTGGGAATCGGCCGAGTTCTAGTGGATGA

Protein sequence

MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHGRMLVLTRPTPRPITSPQALSPQPQSRPSSADHRPVPYQPRPQSDSDSISLRPLGRTGAGAIAPSPIPGLEKDREITPPVVTLHKSEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYGNYGSSSRYGEDGRPKSGGGYERMKGVGEADLGAMVNRPRSSGNRPSSSG

Homology

[Close]

BLAST of PI0026692.1 vs. ExPASy TrEMBL
Match: A0A1S3C160 (translation initiation factor IF-2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495638 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 2.1e-113
Identity = 222/229 (96.94%), Postives = 224/229 (97.82%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60
           MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60

Query: 61  RMLVLTRPTPRPITSPQALSPQPQSRPSSADHRPVPYQPRPQSDSDSISLRPLGRTGAGA 120
           RMLVLTRPTP+PITSPQ LSPQPQSRPSSADHRPVP QPRPQSDSDSISLRPLGRTG GA
Sbjct: 61  RMLVLTRPTPKPITSPQVLSPQPQSRPSSADHRPVPDQPRPQSDSDSISLRPLGRTGTGA 120

Query: 121 IAPSPIPGLEKDREITPPVVTLHKSEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180
           IAPSPI GLEK+REITPPVVTLHK EKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG
Sbjct: 121 IAPSPITGLEKNREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180

Query: 181 NYGSSSRYGEDGRPKSGGGYERMKGVGEADLGAMVNRPRSSGNRPSSSG 230
           NYGSSSRYGEDGRPKSGGGYERMKGVGEADLGAMVNRPRSSGNRPSSSG
Sbjct: 181 NYGSSSRYGEDGRPKSGGGYERMKGVGEADLGAMVNRPRSSGNRPSSSG 229

[Close]

BLAST of PI0026692.1 vs. ExPASy TrEMBL
Match: A0A0A0K3D7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G039270 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.9e-112
Identity = 221/229 (96.51%), Postives = 221/229 (96.51%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60
           MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60

Query: 61  RMLVLTRPTPRPITSPQALSPQPQSRPSSADHRPVPYQPRPQSDSDSISLRPLGRTGAGA 120
           RMLVLTRPTPRPITSPQ LSPQPQSRPSSADHRPVP  PRPQSDSDSISLRPLGRTG GA
Sbjct: 61  RMLVLTRPTPRPITSPQPLSPQPQSRPSSADHRPVPDHPRPQSDSDSISLRPLGRTGTGA 120

Query: 121 IAPSPIPGLEKDREITPPVVTLHKSEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180
           IAPSPIP LEKDREITPPVVTLHK EKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG
Sbjct: 121 IAPSPIPVLEKDREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180

Query: 181 NYGSSSRYGEDGRPKSGGGYERMKGVGEADLGAMVNRPRSSGNRPSSSG 230
           NYGSS RYGEDGRPKSGGGYERMK VGEADLGAMVNRPRSSGNRPSSSG
Sbjct: 181 NYGSSGRYGEDGRPKSGGGYERMKEVGEADLGAMVNRPRSSGNRPSSSG 229

[Close]

BLAST of PI0026692.1 vs. ExPASy TrEMBL
Match: A0A6J1GJZ3 (uncharacterized protein LOC111455051 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455051 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.5e-95
Identity = 193/229 (84.28%), Postives = 203/229 (88.65%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60
           MAKTNKYTSIN+NHIYDK+LS NSKTGNNPS N + SSSSSSSFA+ATYSSISS NKSHG
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSFASATYSSISSANKSHG 60

Query: 61  RMLVLTRPTPRPITSPQALSPQPQSRPSSADHRPVPYQPRPQSDSDSISLRPLGRTGAGA 120
           RMLVLTRPTP+PI+SP  LSPQPQSR  SAD RPV  Q RPQ +SDSISLRPLGRTG GA
Sbjct: 61  RMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQTRPQCESDSISLRPLGRTGTGA 120

Query: 121 IAPSPIPGLEKDREITPPVVTLHKSEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180
           IAPSPIP LEKD+EI PP VTLHK EKFVPPHLRAGFVGKEERPV+VGIRSRE NQRQYG
Sbjct: 121 IAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYG 180

Query: 181 NYGSSSRYGEDGRPKSGGGYERMKGVGEADLGAMVNRPRSSGNRPSSSG 230
           NYGS  RYGEDGRPKSGG YERM G GEAD GAMVNRPRSSGNRP+SSG
Sbjct: 181 NYGSPGRYGEDGRPKSGGAYERMNGAGEADQGAMVNRPRSSGNRPNSSG 229

[Close]

BLAST of PI0026692.1 vs. ExPASy TrEMBL
Match: A0A6J1GK55 (uncharacterized protein LOC111455051 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455051 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.5e-95
Identity = 193/229 (84.28%), Postives = 203/229 (88.65%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60
           MAKTNKYTSIN+NHIYDK+LS NSKTGNNPS N + SSSSSSSFA+ATYSSISS NKSHG
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSFASATYSSISSANKSHG 60

Query: 61  RMLVLTRPTPRPITSPQALSPQPQSRPSSADHRPVPYQPRPQSDSDSISLRPLGRTGAGA 120
           RMLVLTRPTP+PI+SP  LSPQPQSR  SAD RPV  Q RPQ +SDSISLRPLGRTG GA
Sbjct: 61  RMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQTRPQCESDSISLRPLGRTGTGA 120

Query: 121 IAPSPIPGLEKDREITPPVVTLHKSEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180
           IAPSPIP LEKD+EI PP VTLHK EKFVPPHLRAGFVGKEERPV+VGIRSRE NQRQYG
Sbjct: 121 IAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYG 180

Query: 181 NYGSSSRYGEDGRPKSGGGYERMKGVGEADLGAMVNRPRSSGNRPSSSG 230
           NYGS  RYGEDGRPKSGG YERM G GEAD GAMVNRPRSSGNRP+SSG
Sbjct: 181 NYGSPGRYGEDGRPKSGGAYERMNGAGEADQGAMVNRPRSSGNRPNSSG 229

[Close]

BLAST of PI0026692.1 vs. ExPASy TrEMBL
Match: A0A6J1I0F0 (uncharacterized protein LOC111468300 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468300 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.9e-91
Identity = 190/230 (82.61%), Postives = 199/230 (86.52%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSN-KNPSSSSSSSFATATYSSISSPNKSH 60
           MAKTNKYTSIN+NHIYDK+LS NSKTGNNPS N  + SSSSSSSFA+ATYSSISS NKSH
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSFASATYSSISSANKSH 60

Query: 61  GRMLVLTRPTPRPITSPQALSPQPQSRPSSADHRPVPYQPRPQSDSDSISLRPLGRTGAG 120
           GRMLVLTRPTP+PI+S   LSPQPQSR  SAD RPV  Q  PQ +SDSISLRPLGRTG G
Sbjct: 61  GRMLVLTRPTPKPISSLPVLSPQPQSRSPSADPRPVADQTHPQCESDSISLRPLGRTGTG 120

Query: 121 AIAPSPIPGLEKDREITPPVVTLHKSEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQY 180
           AIAPSPIP LEKD+EI PP VTLHK EKFVPPHLRAGFVGKEERPVNVGIRSRE NQRQY
Sbjct: 121 AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY 180

Query: 181 GNYGSSSRYGEDGRPKSGGGYERMKGVGEADLGAMVNRPRSSGNRPSSSG 230
           GNYGS  RYGEDGRPKSGG  ERM G GEAD G MVNRPRSSGNRP+SSG
Sbjct: 181 GNYGSPGRYGEDGRPKSGGANERMNGAGEADQGEMVNRPRSSGNRPNSSG 230

[Close]

BLAST of PI0026692.1 vs. NCBI nr
Match: XP_008455486.1 (PREDICTED: translation initiation factor IF-2 isoform X1 [Cucumis melo] >XP_008455487.1 PREDICTED: translation initiation factor IF-2 isoform X2 [Cucumis melo])

HSP 1 Score: 418.3 bits (1074), Expect = 4.2e-113
Identity = 222/229 (96.94%), Postives = 224/229 (97.82%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60
           MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60

Query: 61  RMLVLTRPTPRPITSPQALSPQPQSRPSSADHRPVPYQPRPQSDSDSISLRPLGRTGAGA 120
           RMLVLTRPTP+PITSPQ LSPQPQSRPSSADHRPVP QPRPQSDSDSISLRPLGRTG GA
Sbjct: 61  RMLVLTRPTPKPITSPQVLSPQPQSRPSSADHRPVPDQPRPQSDSDSISLRPLGRTGTGA 120

Query: 121 IAPSPIPGLEKDREITPPVVTLHKSEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180
           IAPSPI GLEK+REITPPVVTLHK EKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG
Sbjct: 121 IAPSPITGLEKNREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180

Query: 181 NYGSSSRYGEDGRPKSGGGYERMKGVGEADLGAMVNRPRSSGNRPSSSG 230
           NYGSSSRYGEDGRPKSGGGYERMKGVGEADLGAMVNRPRSSGNRPSSSG
Sbjct: 181 NYGSSSRYGEDGRPKSGGGYERMKGVGEADLGAMVNRPRSSGNRPSSSG 229

[Close]

BLAST of PI0026692.1 vs. NCBI nr
Match: XP_004144518.1 (uncharacterized protein LOC101206223 [Cucumis sativus])

HSP 1 Score: 414.1 bits (1063), Expect = 8.0e-112
Identity = 221/229 (96.51%), Postives = 221/229 (96.51%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60
           MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60

Query: 61  RMLVLTRPTPRPITSPQALSPQPQSRPSSADHRPVPYQPRPQSDSDSISLRPLGRTGAGA 120
           RMLVLTRPTPRPITSPQ LSPQPQSRPSSADHRPVP  PRPQSDSDSISLRPLGRTG GA
Sbjct: 61  RMLVLTRPTPRPITSPQPLSPQPQSRPSSADHRPVPDHPRPQSDSDSISLRPLGRTGTGA 120

Query: 121 IAPSPIPGLEKDREITPPVVTLHKSEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180
           IAPSPIP LEKDREITPPVVTLHK EKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG
Sbjct: 121 IAPSPIPVLEKDREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180

Query: 181 NYGSSSRYGEDGRPKSGGGYERMKGVGEADLGAMVNRPRSSGNRPSSSG 230
           NYGSS RYGEDGRPKSGGGYERMK VGEADLGAMVNRPRSSGNRPSSSG
Sbjct: 181 NYGSSGRYGEDGRPKSGGGYERMKEVGEADLGAMVNRPRSSGNRPSSSG 229

[Close]

BLAST of PI0026692.1 vs. NCBI nr
Match: XP_038888443.1 (translation initiation factor IF-2 isoform X1 [Benincasa hispida])

HSP 1 Score: 372.1 bits (954), Expect = 3.5e-99
Identity = 206/235 (87.66%), Postives = 211/235 (89.79%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSN----KNPSSSSSSSFATATYSSISSPN 60
           MAKTNKYTSINFNHIYDKNLS NSKTGNNPS N     + SSSSSSSFA+ATYSSISSPN
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSPNSKTGNNPSKNPSSSSSSSSSSSSSFASATYSSISSPN 60

Query: 61  KSHGRMLVLTRPTPRPITSPQALSPQPQSRPSSADHRPVPYQPR-PQSDSDSISLRPLGR 120
           KSHGRMLVLTRPTP+PITSP  LSPQPQ RP SADHRPVP Q R PQSDSDSISLRPLGR
Sbjct: 61  KSHGRMLVLTRPTPKPITSPPPLSPQPQYRPPSADHRPVPDQTRPPQSDSDSISLRPLGR 120

Query: 121 TGAGAIAPSPIPGLEKDREITPP-VVTLHKSEKFVPPHLRAGFVGKEERPVNVGIRSREG 180
           TG G IAPSPIP LEKD+EITPP  VTLHK EKFVPPHLRAGFVGKEERPVNVGIRSRE 
Sbjct: 121 TGTGGIAPSPIPSLEKDKEITPPAAVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREA 180

Query: 181 NQRQYGNYGSSSRYGEDGRPKSGGGYERMKGVGEADLGAMVNRPRSSGNRPSSSG 230
           NQRQYGNYGS SRYGEDGRPKSGGGYERMKG GEA+LGAMVNRPRSSGNRPSSSG
Sbjct: 181 NQRQYGNYGSPSRYGEDGRPKSGGGYERMKGAGEANLGAMVNRPRSSGNRPSSSG 235

[Close]

BLAST of PI0026692.1 vs. NCBI nr
Match: XP_038888444.1 (putative protein TPRXL isoform X2 [Benincasa hispida])

HSP 1 Score: 372.1 bits (954), Expect = 3.5e-99
Identity = 206/235 (87.66%), Postives = 211/235 (89.79%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSN----KNPSSSSSSSFATATYSSISSPN 60
           MAKTNKYTSINFNHIYDKNLS NSKTGNNPS N     + SSSSSSSFA+ATYSSISSPN
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSPNSKTGNNPSKNPSSSSSSSSSSSSSFASATYSSISSPN 60

Query: 61  KSHGRMLVLTRPTPRPITSPQALSPQPQSRPSSADHRPVPYQPR-PQSDSDSISLRPLGR 120
           KSHGRMLVLTRPTP+PITSP  LSPQPQ RP SADHRPVP Q R PQSDSDSISLRPLGR
Sbjct: 61  KSHGRMLVLTRPTPKPITSPPPLSPQPQYRPPSADHRPVPDQTRPPQSDSDSISLRPLGR 120

Query: 121 TGAGAIAPSPIPGLEKDREITPP-VVTLHKSEKFVPPHLRAGFVGKEERPVNVGIRSREG 180
           TG G IAPSPIP LEKD+EITPP  VTLHK EKFVPPHLRAGFVGKEERPVNVGIRSRE 
Sbjct: 121 TGTGGIAPSPIPSLEKDKEITPPAAVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREA 180

Query: 181 NQRQYGNYGSSSRYGEDGRPKSGGGYERMKGVGEADLGAMVNRPRSSGNRPSSSG 230
           NQRQYGNYGS SRYGEDGRPKSGGGYERMKG GEA+LGAMVNRPRSSGNRPSSSG
Sbjct: 181 NQRQYGNYGSPSRYGEDGRPKSGGGYERMKGAGEANLGAMVNRPRSSGNRPSSSG 235

[Close]

BLAST of PI0026692.1 vs. NCBI nr
Match: XP_022952341.1 (uncharacterized protein LOC111455051 isoform X1 [Cucurbita moschata] >KAG6572266.1 hypothetical protein SDJN03_28994, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 358.2 bits (918), Expect = 5.2e-95
Identity = 193/229 (84.28%), Postives = 203/229 (88.65%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60
           MAKTNKYTSIN+NHIYDK+LS NSKTGNNPS N + SSSSSSSFA+ATYSSISS NKSHG
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSFASATYSSISSANKSHG 60

Query: 61  RMLVLTRPTPRPITSPQALSPQPQSRPSSADHRPVPYQPRPQSDSDSISLRPLGRTGAGA 120
           RMLVLTRPTP+PI+SP  LSPQPQSR  SAD RPV  Q RPQ +SDSISLRPLGRTG GA
Sbjct: 61  RMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQTRPQCESDSISLRPLGRTGTGA 120

Query: 121 IAPSPIPGLEKDREITPPVVTLHKSEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180
           IAPSPIP LEKD+EI PP VTLHK EKFVPPHLRAGFVGKEERPV+VGIRSRE NQRQYG
Sbjct: 121 IAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYG 180

Query: 181 NYGSSSRYGEDGRPKSGGGYERMKGVGEADLGAMVNRPRSSGNRPSSSG 230
           NYGS  RYGEDGRPKSGG YERM G GEAD GAMVNRPRSSGNRP+SSG
Sbjct: 181 NYGSPGRYGEDGRPKSGGAYERMNGAGEADQGAMVNRPRSSGNRPNSSG 229

[Close]

BLAST of PI0026692.1 vs. TAIR 10
Match: AT3G54680.1 (proteophosphoglycan-related )

HSP 1 Score: 104.0 bits (258), Expect = 1.6e-22
Identity = 93/237 (39.24%), Postives = 125/237 (52.74%), Query Frame = 0


Query: 5   NKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHGRMLV 64
           NKYTSINFNHI                 +K+P SSSSSS ++A+YSS++   +S+GRMLV
Sbjct: 7   NKYTSINFNHIL----------------HKDPPSSSSSS-SSASYSSVA---RSNGRMLV 66

Query: 65  LTRPTPRPITSPQALSPQPQSRPSSADHRPVP-YQPRPQSDSDSISLRPLGRTGAGAIAP 124
           LT+ +P+P+ SP A      + P  +    +P  Q     D   ISLRPLG TG+ +   
Sbjct: 67  LTKSSPKPLRSPSAAPTTTTTAPPISTAPRIPSNQAISDPDPSQISLRPLGHTGSSSSLS 126

Query: 125 SPI--PGLEKDREIT--PPVVTLHKSEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQY 184
            PI  P + K  E+    PV    K ++FVPPHLR GFV K+E+P     R R+ N    
Sbjct: 127 FPIRTPEINKAPEVNAPTPVSLSPKPDRFVPPHLRPGFVRKDEKPGLNSSRVRDPNPNLN 186

Query: 185 GNYGSSSR-------YGEDGRPKSGGGYERMKGVGEADLGAMVNRPRSSGNRPSSSG 230
               +  +       YG+ GRPKS GGYER++             PR +GNRP +SG
Sbjct: 187 QRLPNQEQPRQEYFGYGQPGRPKS-GGYERIR-----------TDPRITGNRPGTSG 211

The following BLAST results are available for this feature:

BLAST of PI0026692.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0026692.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C160	2.1e-113	96.94	translation initiation factor IF-2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A0A0K3D7	3.9e-112	96.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G039270 PE=4 SV=1	[more]
A0A6J1GJZ3	2.5e-95	84.28	uncharacterized protein LOC111455051 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GK55	2.5e-95	84.28	uncharacterized protein LOC111455051 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1I0F0	2.9e-91	82.61	uncharacterized protein LOC111468300 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of PI0026692.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455486.1	4.2e-113	96.94	PREDICTED: translation initiation factor IF-2 isoform X1 [Cucumis melo] >XP_0084...	[more]
XP_004144518.1	8.0e-112	96.51	uncharacterized protein LOC101206223 [Cucumis sativus]	[more]
XP_038888443.1	3.5e-99	87.66	translation initiation factor IF-2 isoform X1 [Benincasa hispida]	[more]
XP_038888444.1	3.5e-99	87.66	putative protein TPRXL isoform X2 [Benincasa hispida]	[more]
XP_022952341.1	5.2e-95	84.28	uncharacterized protein LOC111455051 isoform X1 [Cucurbita moschata] >KAG6572266...	[more]

BLAST of PI0026692.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54680.1	1.6e-22	39.24	proteophosphoglycan-related	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..229

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0026692	PI0026692	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0026692.1-exon	PI0026692.1-exon-chr01:3637379..3637909	exon
PI0026692.1-exon	PI0026692.1-exon-chr01:3639511..3640564	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0026692.1-three_prime_utr	PI0026692.1-three_prime_utr-chr01:3637379..3637908	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0026692.1-cds	PI0026692.1-cds-chr01:3637909..3637909	CDS
PI0026692.1-cds	PI0026692.1-cds-chr01:3639511..3640199	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0026692.1-five_prime_utr	PI0026692.1-five_prime_utr-chr01:3640200..3640564	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0026692.1	PI0026692.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006413	translational initiation
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003743	translation initiation factor activity