PI0026617.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0026617.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr07: 3123496 .. 3123972 (-)
Sequence length	477
RNA-Seq Expression	PI0026617.1
Synteny	PI0026617.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCCACCCACTTTTGTGTATTATAAAATAATAATAATACAACAATGGAAGGCCAGCAGGTTTTGGAAAATTTCGATTCTCTCTGGTTCTACGCCACCGGTCGTTGAAAAACCCTTTCAAAACGACTTTGTTGAGCCTCCCGTAGAAGAAATTGCGACACCCATCACTCAAAATGAGGAAAATAATGTTGGTGAAGAGAAGAAGACGGAAACAGGGGAGAAAGAAGAGAAGAGGAGAAAAAACAGAGGAAGGAGGAGTTGGGGTTTGGAACAGAGGAGAAAATTTATTGTTGGAGAGATAGATCTGAGTTATGCTGTGAAGGAGATTTGTGAATGTTGGTTTTTTGAAGAGATGAGAATTGGAGGTGGGAAGAAGACGAAGAAGATGCCATCGTTTGAAGATATTATGGCTAGTATTGCCATGAAAAAGCATATCAGATCTTGGGCTTATGCAGTGGCTTGCAATGTTAGATGA

mRNA sequence

ATGATTCCACCCACTTTTGTGTATTATAAAATAATAATAATACAACAATGGAAGGCCAGCAGGTTTTGGAAAATTTCGATTCTCTCTGGTTCTACGCCACCGGTCGTTGAAAAACCCTTTCAAAACGACTTTGTTGAGCCTCCCGTAGAAGAAATTGCGACACCCATCACTCAAAATGAGGAAAATAATGTTGGTGAAGAGAAGAAGACGGAAACAGGGGAGAAAGAAGAGAAGAGGAGAAAAAACAGAGGAAGGAGGAGTTGGGGTTTGGAACAGAGGAGAAAATTTATTGTTGGAGAGATAGATCTGAGTTATGCTGTGAAGGAGATTTGTGAATGTTGGTTTTTTGAAGAGATGAGAATTGGAGGTGGGAAGAAGACGAAGAAGATGCCATCGTTTGAAGATATTATGGCTAGTATTGCCATGAAAAAGCATATCAGATCTTGGGCTTATGCAGTGGCTTGCAATGTTAGATGA

Coding sequence (CDS)

ATGATTCCACCCACTTTTGTGTATTATAAAATAATAATAATACAACAATGGAAGGCCAGCAGGTTTTGGAAAATTTCGATTCTCTCTGGTTCTACGCCACCGGTCGTTGAAAAACCCTTTCAAAACGACTTTGTTGAGCCTCCCGTAGAAGAAATTGCGACACCCATCACTCAAAATGAGGAAAATAATGTTGGTGAAGAGAAGAAGACGGAAACAGGGGAGAAAGAAGAGAAGAGGAGAAAAAACAGAGGAAGGAGGAGTTGGGGTTTGGAACAGAGGAGAAAATTTATTGTTGGAGAGATAGATCTGAGTTATGCTGTGAAGGAGATTTGTGAATGTTGGTTTTTTGAAGAGATGAGAATTGGAGGTGGGAAGAAGACGAAGAAGATGCCATCGTTTGAAGATATTATGGCTAGTATTGCCATGAAAAAGCATATCAGATCTTGGGCTTATGCAGTGGCTTGCAATGTTAGATGA

Protein sequence

MIPPTFVYYKIIIIQQWKASRFWKISILSGSTPPVVEKPFQNDFVEPPVEEIATPITQNEENNVGEEKKTETGEKEEKRRKNRGRRSWGLEQRRKFIVGEIDLSYAVKEICECWFFEEMRIGGGKKTKKMPSFEDIMASIAMKKHIRSWAYAVACNVR

Homology

[Close]

BLAST of PI0026617.1 vs. ExPASy TrEMBL
Match: A0A5A7UQZ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002450 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.8e-52
Identity = 110/133 (82.71%), Postives = 118/133 (88.72%), Query Frame = 0


Query: 26  SILSGSTPPVVEKPFQNDFVEPPVEEIATPITQNEENNVGEEKKTETGEKEEKRRKNRGR 85
           ++ S  TPPVVEKP QNDFVEP  EEIATPIT+NEEN+VGEEK+ ET E EEKRRKNRGR
Sbjct: 18  TVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEKEMETEEMEEKRRKNRGR 77

Query: 86  RSWGLEQRRKFIVGEIDLSYAVKEICECWFFEEMRIGGGKKTKKMPSFEDIMASIAMKKH 145
           RSWGLEQRRKF+VGEIDLSYAVKEICECW FE MRIGGGKKTKKMPSFED   S+AMK+H
Sbjct: 78  RSWGLEQRRKFVVGEIDLSYAVKEICECWSFEVMRIGGGKKTKKMPSFED---SMAMKEH 137

Query: 146 IRSWAYAVACNVR 159
           IRSWAYAVAC VR
Sbjct: 138 IRSWAYAVACTVR 147

[Close]

BLAST of PI0026617.1 vs. ExPASy TrEMBL
Match: A0A1S3B8X4 (uncharacterized protein LOC103487056 OS=Cucumis melo OX=3656 GN=LOC103487056 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.8e-52
Identity = 110/133 (82.71%), Postives = 118/133 (88.72%), Query Frame = 0


Query: 26  SILSGSTPPVVEKPFQNDFVEPPVEEIATPITQNEENNVGEEKKTETGEKEEKRRKNRGR 85
           ++ S  TPPVVEKP QNDFVEP  EEIATPIT+NEEN+VGEEK+ ET E EEKRRKNRGR
Sbjct: 18  TVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEKEMETEEMEEKRRKNRGR 77

Query: 86  RSWGLEQRRKFIVGEIDLSYAVKEICECWFFEEMRIGGGKKTKKMPSFEDIMASIAMKKH 145
           RSWGLEQRRKF+VGEIDLSYAVKEICECW FE MRIGGGKKTKKMPSFED   S+AMK+H
Sbjct: 78  RSWGLEQRRKFVVGEIDLSYAVKEICECWSFEVMRIGGGKKTKKMPSFED---SMAMKEH 137

Query: 146 IRSWAYAVACNVR 159
           IRSWAYAVAC VR
Sbjct: 138 IRSWAYAVACTVR 147

[Close]

BLAST of PI0026617.1 vs. ExPASy TrEMBL
Match: A0A0A0LX63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470250 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 2.1e-48
Identity = 105/133 (78.95%), Postives = 114/133 (85.71%), Query Frame = 0


Query: 26  SILSGSTPPVVEKPFQNDFVEPPVEEIATPITQNEENNVGEEKKTETGEKEEKRRKNRGR 85
           ++ S  TPPVV KP QNDFV    EEIATPIT+NEENNV E K+ ET E+EEKRRKNRG 
Sbjct: 18  TVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEAKEMETEEREEKRRKNRGG 77

Query: 86  RSWGLEQRRKFIVGEIDLSYAVKEICECWFFEEMRIGGGKKTKKMPSFEDIMASIAMKKH 145
           RSWGLEQR+KFIVGEIDLSYAVKEICECW FEEMRIGGG+KTKKMPSFED   S+AMK+H
Sbjct: 78  RSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTKKMPSFED---SMAMKEH 137

Query: 146 IRSWAYAVACNVR 159
           IRSWAYAVAC VR
Sbjct: 138 IRSWAYAVACTVR 147

[Close]

BLAST of PI0026617.1 vs. ExPASy TrEMBL
Match: A0A6J1EGY0 (uncharacterized protein LOC111434099 OS=Cucurbita moschata OX=3662 GN=LOC111434099 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.3e-29
Identity = 89/165 (53.94%), Postives = 107/165 (64.85%), Query Frame = 0


Query: 13  IIQQWKASRFWKISILSGSTPPVVEKPFQNDFVEPPVEEIATPITQN-----EENNVGEE 72
           ++Q   +  F+     + + PPVV+KP Q+DFVEPP  EIATPI QN     EE N+ +E
Sbjct: 6   VLQNLDSLWFFATVFSNRTPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDE 65

Query: 73  KKTETGEK-----EEKRRKNRGRRSWGLEQRRKFIVGEIDLSYAVKEICECWFFEEMRIG 132
           K  ETG        E+RRK+RGRR WG   +R+ IVGE+DLS AVKEICECW  E+ RIG
Sbjct: 66  KTNETGGGLGLIITEERRKSRGRR-WGCLGQRRKIVGEMDLSDAVKEICECWLLEQ-RIG 125

Query: 133 GGK---------KTKKMPSFEDIMASIAMKKHIRSWAYAVACNVR 159
           GG          K KKMP FED   S+AMK+HIRSWAYAVAC VR
Sbjct: 126 GGNQYQRGGRKMKKKKMPPFED---SMAMKEHIRSWAYAVACTVR 165

[Close]

BLAST of PI0026617.1 vs. ExPASy TrEMBL
Match: A0A6J1KF61 (uncharacterized protein LOC111495257 OS=Cucurbita maxima OX=3661 GN=LOC111495257 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 4.5e-27
Identity = 83/144 (57.64%), Postives = 99/144 (68.75%), Query Frame = 0


Query: 34  PVVEKPFQNDFVEPPVEEIATPITQNEEN-----NVGEEKKTETGEK-----EEKRRKNR 93
           PVV+KP +NDFVE P  EIATPI QN++N     N+ +EK  ETG        E+RRK+R
Sbjct: 34  PVVQKPTENDFVELPGGEIATPIFQNQQNVGDERNIVDEKTNETGGGFGSIITEERRKSR 93

Query: 94  GRRSWGLEQRRKFIVGEIDLSYAVKEICECWFFEEMRIGGGK---------KTKKMPSFE 153
           GRR WG  ++R+ IVGE+DLS AVKEICECW  E+ RIGGG          K KK+P FE
Sbjct: 94  GRR-WGCLRQRREIVGEMDLSDAVKEICECWLLEQ-RIGGGNQYQRGRRKMKKKKIPPFE 153

Query: 154 DIMASIAMKKHIRSWAYAVACNVR 159
           D   S+AMK+HIRSWAYAVAC VR
Sbjct: 154 D---SMAMKEHIRSWAYAVACTVR 172

[Close]

BLAST of PI0026617.1 vs. NCBI nr
Match: XP_008443476.1 (PREDICTED: uncharacterized protein LOC103487056 [Cucumis melo] >KAA0057057.1 uncharacterized protein E6C27_scaffold96G002450 [Cucumis melo var. makuwa])

HSP 1 Score: 215.3 bits (547), Expect = 3.8e-52
Identity = 110/133 (82.71%), Postives = 118/133 (88.72%), Query Frame = 0


Query: 26  SILSGSTPPVVEKPFQNDFVEPPVEEIATPITQNEENNVGEEKKTETGEKEEKRRKNRGR 85
           ++ S  TPPVVEKP QNDFVEP  EEIATPIT+NEEN+VGEEK+ ET E EEKRRKNRGR
Sbjct: 18  TVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEKEMETEEMEEKRRKNRGR 77

Query: 86  RSWGLEQRRKFIVGEIDLSYAVKEICECWFFEEMRIGGGKKTKKMPSFEDIMASIAMKKH 145
           RSWGLEQRRKF+VGEIDLSYAVKEICECW FE MRIGGGKKTKKMPSFED   S+AMK+H
Sbjct: 78  RSWGLEQRRKFVVGEIDLSYAVKEICECWSFEVMRIGGGKKTKKMPSFED---SMAMKEH 137

Query: 146 IRSWAYAVACNVR 159
           IRSWAYAVAC VR
Sbjct: 138 IRSWAYAVACTVR 147

[Close]

BLAST of PI0026617.1 vs. NCBI nr
Match: XP_011657601.1 (uncharacterized protein LOC101209234 [Cucumis sativus])

HSP 1 Score: 201.8 bits (512), Expect = 4.3e-48
Identity = 105/133 (78.95%), Postives = 114/133 (85.71%), Query Frame = 0


Query: 26  SILSGSTPPVVEKPFQNDFVEPPVEEIATPITQNEENNVGEEKKTETGEKEEKRRKNRGR 85
           ++ S  TPPVV KP QNDFV    EEIATPIT+NEENNV E K+ ET E+EEKRRKNRG 
Sbjct: 18  TVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEAKEMETEEREEKRRKNRGG 77

Query: 86  RSWGLEQRRKFIVGEIDLSYAVKEICECWFFEEMRIGGGKKTKKMPSFEDIMASIAMKKH 145
           RSWGLEQR+KFIVGEIDLSYAVKEICECW FEEMRIGGG+KTKKMPSFED   S+AMK+H
Sbjct: 78  RSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTKKMPSFED---SMAMKEH 137

Query: 146 IRSWAYAVACNVR 159
           IRSWAYAVAC VR
Sbjct: 138 IRSWAYAVACTVR 147

[Close]

BLAST of PI0026617.1 vs. NCBI nr
Match: KAE8653211.1 (hypothetical protein Csa_019764 [Cucumis sativus])

HSP 1 Score: 201.8 bits (512), Expect = 4.3e-48
Identity = 105/133 (78.95%), Postives = 114/133 (85.71%), Query Frame = 0


Query: 26  SILSGSTPPVVEKPFQNDFVEPPVEEIATPITQNEENNVGEEKKTETGEKEEKRRKNRGR 85
           ++ S  TPPVV KP QNDFV    EEIATPIT+NEENNV E K+ ET E+EEKRRKNRG 
Sbjct: 50  TVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEAKEMETEEREEKRRKNRGG 109

Query: 86  RSWGLEQRRKFIVGEIDLSYAVKEICECWFFEEMRIGGGKKTKKMPSFEDIMASIAMKKH 145
           RSWGLEQR+KFIVGEIDLSYAVKEICECW FEEMRIGGG+KTKKMPSFED   S+AMK+H
Sbjct: 110 RSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTKKMPSFED---SMAMKEH 169

Query: 146 IRSWAYAVACNVR 159
           IRSWAYAVAC VR
Sbjct: 170 IRSWAYAVACTVR 179

[Close]

BLAST of PI0026617.1 vs. NCBI nr
Match: XP_038895160.1 (uncharacterized protein LOC120083464 [Benincasa hispida])

HSP 1 Score: 188.0 bits (476), Expect = 6.4e-44
Identity = 106/164 (64.63%), Postives = 122/164 (74.39%), Query Frame = 0


Query: 13  IIQQWKASRFWKISILSGST-----PPVVEKPFQNDFVEPPVEEIATPITQNEENNVGEE 72
           +++ W +  F+  ++ S  T     PPVVE P QNDFVEPP EEIATP+T NE+NNVG+E
Sbjct: 6   VLENWDSLWFF-ATVFSNRTPPPPPPPVVENPTQNDFVEPPGEEIATPLTPNEQNNVGDE 65

Query: 73  KKTETG-------EKEEKRRKNRGRRSWGLEQRRKFIVGEIDLSYAVKEICECWFFEEMR 132
           KK E G       E++E+RRKNRGRR WGLEQRRK IVGE+DLSYAVKEICECW FEE R
Sbjct: 66  KKIENGGGFGIKTEEKEQRRKNRGRRCWGLEQRRK-IVGEMDLSYAVKEICECWLFEETR 125

Query: 133 IGGG------KKTKKMPSFEDIMASIAMKKHIRSWAYAVACNVR 159
           IGGG      KKTKKMP FED   S+AMK+HIRSWAYAVAC VR
Sbjct: 126 IGGGNQYQRKKKTKKMPPFED---SMAMKEHIRSWAYAVACTVR 164

[Close]

BLAST of PI0026617.1 vs. NCBI nr
Match: XP_022927166.1 (uncharacterized protein LOC111434099 [Cucurbita moschata])

HSP 1 Score: 139.4 bits (350), Expect = 2.6e-29
Identity = 89/165 (53.94%), Postives = 107/165 (64.85%), Query Frame = 0


Query: 13  IIQQWKASRFWKISILSGSTPPVVEKPFQNDFVEPPVEEIATPITQN-----EENNVGEE 72
           ++Q   +  F+     + + PPVV+KP Q+DFVEPP  EIATPI QN     EE N+ +E
Sbjct: 6   VLQNLDSLWFFATVFSNRTPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDE 65

Query: 73  KKTETGEK-----EEKRRKNRGRRSWGLEQRRKFIVGEIDLSYAVKEICECWFFEEMRIG 132
           K  ETG        E+RRK+RGRR WG   +R+ IVGE+DLS AVKEICECW  E+ RIG
Sbjct: 66  KTNETGGGLGLIITEERRKSRGRR-WGCLGQRRKIVGEMDLSDAVKEICECWLLEQ-RIG 125

Query: 133 GGK---------KTKKMPSFEDIMASIAMKKHIRSWAYAVACNVR 159
           GG          K KKMP FED   S+AMK+HIRSWAYAVAC VR
Sbjct: 126 GGNQYQRGGRKMKKKKMPPFED---SMAMKEHIRSWAYAVACTVR 165

The following BLAST results are available for this feature:

BLAST of PI0026617.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0026617.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UQZ2	1.8e-52	82.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3B8X4	1.8e-52	82.71	uncharacterized protein LOC103487056 OS=Cucumis melo OX=3656 GN=LOC103487056 PE=...	[more]
A0A0A0LX63	2.1e-48	78.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470250 PE=4 SV=1	[more]
A0A6J1EGY0	1.3e-29	53.94	uncharacterized protein LOC111434099 OS=Cucurbita moschata OX=3662 GN=LOC1114340...	[more]
A0A6J1KF61	4.5e-27	57.64	uncharacterized protein LOC111495257 OS=Cucurbita maxima OX=3661 GN=LOC111495257...	[more]

BLAST of PI0026617.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443476.1	3.8e-52	82.71	PREDICTED: uncharacterized protein LOC103487056 [Cucumis melo] >KAA0057057.1 unc...	[more]
XP_011657601.1	4.3e-48	78.95	uncharacterized protein LOC101209234 [Cucumis sativus]	[more]
KAE8653211.1	4.3e-48	78.95	hypothetical protein Csa_019764 [Cucumis sativus]	[more]
XP_038895160.1	6.4e-44	64.63	uncharacterized protein LOC120083464 [Benincasa hispida]	[more]
XP_022927166.1	2.6e-29	53.94	uncharacterized protein LOC111434099 [Cucurbita moschata]	[more]

BLAST of PI0026617.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..87
None	No IPR available	PANTHER	PTHR33785:SF8	SUBFAMILY NOT NAMED	coord: 41..158
None	No IPR available	PANTHER	PTHR33785	FAMILY NOT NAMED	coord: 41..158

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0026617	PI0026617	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0026617.1-exon	PI0026617.1-exon-chr07:3123496..3123972	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0026617.1-cds	PI0026617.1-cds-chr07:3123496..3123972	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0026617.1	PI0026617.1-protein	polypeptide