PI0026287.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0026287.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr06: 26921426 .. 26924897 (-)
Sequence length	240
RNA-Seq Expression	PI0026287.1
Synteny	PI0026287.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACATCAGCAAAAGGTATTTGACATATTTTAAAAAATTAGGTCATTTTACATTTTGGACCTCTTGAATGCGTCTTTTATACAATTAATTCCATCCAAAATAGTATTGAAGCACTCAAGATATGTCATGAAGGATTACAAACATCACGTGTTTAGCTTTCACACATTTGGCTCTTGTAAATAACATCATTAATATAAATGTGCCAATTTTGAAGGATAGGACTATTTTACACATATTGTGAAATTGTGAATTCAATTTTGTGTACTTAATTTCCAAGCTTCCCATTTGGCAATATTCCCAAAATGGTTGGTTGAGATATTCCATTTACATACTTTTCTTTTGAATTATGGAAAGGCGACTAGGCCTTTCCAAATAATATGGAACAGTAATATATATATACACACACATATGTGTGGTTCCATTATTGAGTCTCTATTTCCTTATCATCCATAAAATTACACTTCAATGAATGGTGGGATATATTTAAAGGTATAATTTTGCTAAGAGTACTCCTTAAATTTAAGGGAAATTTACCTATATAGAACAAAATCCAAAAATATTTACAGTTCGGGTAATAAAGTCTATGAAGTCGGTCTTTTTTTTAATATTTCAGGTTTGCCTTTCCTTTTCATCTCTTTCTTCTCTTCAATTTTTTTTTCTTTCCATCGTCTTTTTCTCTTATTCTGCAATTTTTTCTTTTTCTCTTCTTCTACAATTTTTCTTTTATATTGTTAACAAAAATGGTTGCACACATACACGTCTAGATTTATCGCAAAATTGTTACGATCGTGTACAAAAAAGTCTTCGTGTAAAATGTGTAAACGTAGTCAAATCTAAATCTAAACCATCGTGCATAGCCAAAAGAAAGAATCTTTAAAAAAAACGTTAACAATCGATTAACCAAATATATTACCGAAATTATAAATATTTTACCATTTTCCATTTTCGAAAATATAAATATTTTATTGTGGGTCTGTAGAATTTTTCCATTTTCGAAATTATAAATATTTTACCGCTTTATTATATTTTTTAAAAAAAATGCTTAAATTTAAATGTAATAACTTTAAGTAATTATAAAAATTAACTATTTAGATTTCATTCGAAATTAATTAAAAAAATTTTATTCTTAAAATTAAGTCTATTTTTTCACTAATTTTATTTGAAATTGGTGATGATTGTCAACAGAAGTTGCCATAGTTGGTTTGGTGGTAGGATGTAGTTGAACTTGATCGTGAGTGTTAGTGGTAAGATGTGTTCTCCTGTGATTAGAGTGACAAATTAGTGAATTTGGATATAAAATATAAACGACATACAGAATTAGGTTTCAAAGACGAATGACGCAACTCATACCAATTTGTAATAAATCTTCAAAGTTTATGAAAAATATTAAACATAGAAATAATGAAAAATATACTAAAAAGAGAGTTGGAAAAAAGAAAAAAAAAAAATGATGGGTTGGTAAAAGGTGAAAACTTTAATTGTTTTAAAGAGAGACATAATAAAACGTGTGGACCAATTTCCCATATGTCTGCTTCAGATATTATTATGATGTTTTACTTCAAAAATTACAAATACTATTTTTCTAAATACTATTTTAAAACATTTTTCTTATTCTTTTTAGATTTTAATTGAACTAAAACAAAAATATTCAATTTGTTTCTCATTTAACTACACTTCTATTTTACCTTTACCTCATTTAACACCATTTTTCTTAGTTACAAAAGAATTCATTTTGTTCTATATACACCCACGTTAAATTTTTTTAAATTTATACGATTATTAGTTTTTGTTTAAATTCATATTTTTCCAAAAATTAATAATTTTAGATGATAAAAAAATATATTTTAAAACATTAATAAATAAAAATTATGTATGCAAATTGTAAAGAAGGATGTCATATGAATACTATTGAGCCAACTATGTTAAATACAAAAGTGGGATATTATTAACATCATCTGCTCATGTTATTTAATCTATGTTTGACATGAGGTTGAGTGAGAAGGAAGTTGGTTTGGTTATTGTTTGTTTGTATTATGTCTTAGAAAAGAATATTATTTAACAAAAGAAAAATGAAATGTTTTTATGAAAAGAAGAAGGAAAAAACATTGGGTTTAGTTTTAAAATGAATGGATGTGGGTATGAATAATGTAACAAAGTGGCAAGAATGTAATAATGTAGAAGGATAAGGGTTAATGGTGAAGGGGCCACGTGTCGAATAGTTTTCCTTAAAACATTAATTTTTTGTCCTAATTTTTAAGCAAATGCCTCAAAACCATACCCTTTTTCAATAAATGGTTTCAGTCATCCATCGCCATCGTTGATCGTTGATAATAATAAGTGTGAAGCTCCACCTCAATTTATGAACTCATTTACCTTTCTCTTCAATTATGCCTTCTGGGTATTCTTTTTTCTTCTTAAATATCTACTTTTTACTCTTTTTCTTTTCAACTTGCTTCCTTTAAGGTTAGTGTTCTTTGCATTTCTGTATGATTTTATTTACTTCATCCTTGATGCTAATTCTCTCAACTGCTTCTCTTTTTTCTTAGCTTGAATCTTAGTTCTGGGCTTGATTTTTTTTTGGTTTTTAATCTCAGATTGCTGTTTTTTGTCTCTTGATTGTTTAATTTTGAACTGTTTCAACCCCTCCCCTCTTTTTCTTTTTTGTTGCTTTTTCTTGGGAATATGCGGATCTTGCCCTTGCTTTCAACTCCACAAGCTTTTTCTTTACTGTTTTTTATGCCTTTTCATGTTCTTAGATTGTGAGGGCAAGATTTTCCCCCTTTTCCATGTTTCTCTACTTCAATTAGAGTTTGTGTGTTTAAGATTTTGTGTATGTGACAGAGGGCAAGGGTATTTCTACTTCAATTAGAGTTTGTGTGATCAGGATTCTGTGTATGAGAGAGATAGAGGGAAAGGGTATATCTTGCTCTGTTGGTTATGTAGAGTTTTTTCGTGTTCGAATCTTCGGGTGAACTTAATGAGGAAAAACTTTCATGTGTGCTGAGGTTTGGCATTGGAACCTAAAAAGAGGGTTTTTCTTTGTAACGTTTGATTATTTTTTGTTTTGTATCTTAGAACAAAATATCTGTTGTTAGTTTTCTCTAGGATAGAGCTTATACGTATGATTCTTTCTTGGTAGTTCTTAAAGAGATGGAAAAGAGAGAACCACGGAATTCTATGAATAATTATCATGTTTGTAATGTAATTTAGGTTAAAGCTGTTTGAAATGTTGATTTTTGTTTATATTCATTCACAATCGAAGTTTGATTTGGGTATATGTAACTTGAACTTTCGTAGGCGAATTAAGCTCAAACAAACCCGTTCTTGAATCTTTCTGATTACAATATCTAGCTTAAGACTCTTTAATGCTTCAAAGTCTTACGTGTTAGCACAGAAAGCCAATCTTGTAATTTCTTCTTCTGTAATATTTTACCTCTGATTTTGTTTGTTAGGTTACATCAGGCATCCTAG

mRNA sequence

ATGACATCAGCAAAAGCAAATGCCTCAAAACCATACCCTTTTTCAATAAATGGTTTCAGTCATCCATCGCCATCGTTGATCGTTGATAATAATAAGTGTGAAGCTCCACCTCAATTTATGAACTCATTTACCTTTCTCTTCAATTATGCCTTCTGGGTATTCTTTTTTCTTCTTAAATATCTACTTTTTACTCTTTTTCTTTTCAACTTGCTTCCTTTAAGGTTACATCAGGCATCCTAG

Coding sequence (CDS)

ATGACATCAGCAAAAGCAAATGCCTCAAAACCATACCCTTTTTCAATAAATGGTTTCAGTCATCCATCGCCATCGTTGATCGTTGATAATAATAAGTGTGAAGCTCCACCTCAATTTATGAACTCATTTACCTTTCTCTTCAATTATGCCTTCTGGGTATTCTTTTTTCTTCTTAAATATCTACTTTTTACTCTTTTTCTTTTCAACTTGCTTCCTTTAAGGTTACATCAGGCATCCTAG

Protein sequence

MTSAKANASKPYPFSINGFSHPSPSLIVDNNKCEAPPQFMNSFTFLFNYAFWVFFFLLKYLLFTLFLFNLLPLRLHQAS

Homology

The following BLAST results are available for this feature:

BLAST of PI0026287.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0026287.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0026287.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0026287.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0026287	PI0026287	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0026287.1-exon	PI0026287.1-exon-chr06:26921426..26921444	exon
PI0026287.1-exon	PI0026287.1-exon-chr06:26922434..26922638	exon
PI0026287.1-exon	PI0026287.1-exon-chr06:26924882..26924897	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0026287.1-cds	PI0026287.1-cds-chr06:26921426..26921444	CDS
PI0026287.1-cds	PI0026287.1-cds-chr06:26922434..26922638	CDS
PI0026287.1-cds	PI0026287.1-cds-chr06:26924882..26924897	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0026287.1	PI0026287.1-protein	polypeptide