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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGACAGCCTTTATGCAAAACTACCTTTACTATTCCAAAGGCAAAAACAAGTCAAAACCATTCCTGTACTGCCACGGGAACTGGTATGGGGATGCTACAAAACTACAAAGGTTGCCAGAAATGATTGGATTGTGGAGAGCTTCCCTTTGTTTGGAAATTCAAACACGACATTCGGAAACTTCAGGAGTTCTCGAGAGTGGAACCATGTAG mRNA sequence ATGACAGCCTTTATGCAAAACTACCTTTACTATTCCAAAGGCAAAAACAAGTCAAAACCATTCCTGTACTGCCACGGGAACTGGTATGGGGATGCTACAAAACTACAAAGGTTGCCAGAAATGATTGGATTGTGGAGAGCTTCCCTTTGTTTGGAAATTCAAACACGACATTCGGAAACTTCAGGAGTTCTCGAGAGTGGAACCATGTAG Coding sequence (CDS) ATGACAGCCTTTATGCAAAACTACCTTTACTATTCCAAAGGCAAAAACAAGTCAAAACCATTCCTGTACTGCCACGGGAACTGGTATGGGGATGCTACAAAACTACAAAGGTTGCCAGAAATGATTGGATTGTGGAGAGCTTCCCTTTGTTTGGAAATTCAAACACGACATTCGGAAACTTCAGGAGTTCTCGAGAGTGGAACCATGTAG Protein sequence MTAFMQNYLYYSKGKNKSKPFLYCHGNWYGDATKLQRLPEMIGLWRASLCLEIQTRHSETSGVLESGTM
Homology
BLAST of PI0025419.1 vs. ExPASy TrEMBL
Match: A0A0A0L5C1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104870 PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.6e-24 Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 0
Query: 1 MTAFMQNYLYYSKGKNKSKPFLYCHGNWYGDATKLQRLPEMIGLWRASLCLEIQTRHSET 60
MT FMQNYLYYSKGK+KSKPFLYCHGNW GDATKLQRL E LWRASLCLEIQT+H+ T
Sbjct: 1 MTDFMQNYLYYSKGKSKSKPFLYCHGNWDGDATKLQRLAE---LWRASLCLEIQTQHAAT 60
Query: 61 SGVLESGTM 70
SGVL+SGTM
Sbjct: 61 SGVLDSGTM 66
BLAST of PI0025419.1 vs. NCBI nr
Match: KGN56234.1 (hypothetical protein Csa_009767 [Cucumis sativus]) HSP 1 Score: 121.3 bits (303), Expect = 3.2e-24 Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 0
Query: 1 MTAFMQNYLYYSKGKNKSKPFLYCHGNWYGDATKLQRLPEMIGLWRASLCLEIQTRHSET 60
MT FMQNYLYYSKGK+KSKPFLYCHGNW GDATKLQRL E LWRASLCLEIQT+H+ T
Sbjct: 1 MTDFMQNYLYYSKGKSKSKPFLYCHGNWDGDATKLQRLAE---LWRASLCLEIQTQHAAT 60
Query: 61 SGVLESGTM 70
SGVL+SGTM
Sbjct: 61 SGVLDSGTM 66
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L5C1 | 1.6e-24 | 84.06 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104870 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN56234.1 | 3.2e-24 | 84.06 | hypothetical protein Csa_009767 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Type |
|---|
| PI0025419 | PI0025419 | gene |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| PI0025419.1-exon | PI0025419.1-exon-chr06:24141351..24141560 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| PI0025419.1-cds | PI0025419.1-cds-chr06:24141351..24141560 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| PI0025419.1 | PI0025419.1-protein | polypeptide |
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