PI0025162.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0025162.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr01: 6838094 .. 6841804 (-)
Sequence length	273
RNA-Seq Expression	PI0025162.1
Synteny	PI0025162.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTGTGTGGGATCCTACGATGAAGAATATCTAGAACAAAATGAATCTAACTCTGACCCTGTTATAGATGGGCCTAGGAGAGGGGAGCGACATGGCTCGAGAGAAAGAAGAGGTTTGAGAAATAGTTACCATGTTGATCGAATCATGCTTCCATTATTCTTTGAAAGTTTTTCAAATTCAAATGCGTATCTTTTGTTGGAGAAGAAAATTGATGTCATATTTGAATATCACCACTATAGTGAAAAGAAAAAGGTAAAGCTTGTTATTCTACGTTTGAAGAATATGCACTAACATGGTGGAGGTATTTATTGTCGAAACGGAGGAGTGAAAATCATGCAACACTCTCATGGAAAGAAATCAAGGTGCTAATGAGAAAGCATTTTGTTCCTTAAGGTTTCCACAAATTGCAAGTTTTGAAGCAAGGGAGCAAAAGTGTCAACATTTACTATGAAGTGTTGTAGTTACTACTTGAGGAGGTTAACATATATGAGAAAGAGGAAACTACCATGCATTGATTCTACAATGGACTTAATGAGAAAATTGTCGATATGCTTGCCAACCGAGAAAAATTCGACCTTGTGAGGACTTGAAATTAATGGTGCATATTGCCATCAAGATATAAAGACTACTCCAAAGGAAATCTTCAAGGTACACTAAATCTAAGCTCAATTTTAATGCCACCACTAGTAAAGAGAAGCGTAATAATGTTGTGTCAATGCACGAACATGATGTTTTGTCTAGTAAGTCATTTATTACTATAGAAGCACGTGTTAATGGTAGTGGTAGAGGAAGTAGATGGTAGTGAACTTGAAACTGATGTACTTTCTAGTCCATTAGAGTTCAAAGTAATATTTGATCCTACTATTGTATAATTGCTTCCAAGAGAAGAAAATCTTGTTATGTGTGAATTGGAATACAAAAGACATGACATTAAGACAAAAGCAACATAAACTATGAAAAAGAAAAATATGCAAACATTCATGAGAGAAAAGCCAAAAATGTTTTGTCTAGTAAGTCATTTCTAATAGGTGAACTTCCACCAAGTTTGCTTAGTTTCTCTTTTGAATTTTTGCAGGAAGTGAAAGTATTAAAGCAAAGGTCCATGAGTGGCCCAAGTTCTTTTGATGGTCAAAAACTAAATGGAGATTTGAAAGACCAATGTTCTTCCAAAACTAGGAGAAATGCAAGATGATGTCTACCTTTGACATCTAATGACTTCAAGACTGCTTTACAAGACTTTGATTTGATTCAAGGATGAATCCTTCAAAAGAAGGAGAGGATAATATGAACCGACCAACCATCAAATTATTAATTAGATTTTATTTAATAATTGTGATGTAATTTTAATATTTTTCAATTTTATCATTTTTAGTAACATTTAAGTAGGATTAATTTAGTATTTTTACATTGCATTAGAGTATTATTAAGAGACTATTTAAGTCTTGCCTTTAGGTTGTTTAAAGGAGTTTTTGATAATTGAAGTTTTAGAGTTTTTTCTATCAATAGAAATTTTCTGGTAGATGATAGAGCCTCATCACCATCTTTTTGCAATTCTTGATTCAGGATTGCATGCCAAGAACATTCAGGTCAGTTTGATCACCTTGCTTGTGGAGTGTTCGAACTTGGAGTGAGAAATAGTTCCTTATTTCTTGGTCTTCGATCAAAGAGTAATCCAAATCTAATTCATTCCTTAGGTTGTTGTCAAATTGATTAGGAGATTTAGATTTTGATATTAGAGGTTCACCAATTGGGTTCCTAATTTTCAAACCCTAAAGTTTTCATATCACAATTATTTGTCTAAGTGCCATGTGATTTGTTGATTTCTATATGATTGCCATGTGATTTTCATTAGATGTTAATTACTTTATGGTTTCTATTTGATTGTTTTGTGATTTTTATCAGATTGGCATATAATCAAATAACTATCAATATCAAATAACACACCAACAACAAATATATAATAAATAAGTGTCATTAGCAATCAGATGACAATAGGTGTCTAATGGAAATAAATAACTATCAATATCAAATAACACACTAACAACAAATATATAATAAATAAGTGTCATTAGCAATCAGATGACAATAGGTATCTAATGGAAATAAATAAAAATCAGTATCAAATTGTATTTAGTAACATCAAGAATCAGTATACAACCAAATAAAGATTAGTGTCATTGGTTGATTATCAGATAGTAAATAAACAACAATCAATATCATAAGCAATTAAATAGCAATCATACATCAATCAAATCTGAAGTCAGTTAATCAATAAGGATATTTTTCAGTCTTATTTCAAACTTCTAACTATGTAACAAGGCAATCAAAAGGCAACCAGAAACTACCCACTAATTAACAAAAGAAATTATATGGCAATATCATAAACTATTAATTATGTCTCAAAGAACTGTGTAAAAAAAGACAATCAAATGATAATATCAGTAATAACTACATATCAAAGAATAGAAGATAATACGATGACAATTAGAAGGCAATCATATGACTATTAGATGAAAAAAAATCATCTTTCTAAAACATGACAAAATCATAAACAACTAGATAATGTGTCAACTAGATAAACAACTTAGTCAAATGTCAATCAAAAGACAATATCATAAACAATGAATTCATCGACAAAGATGAAAGAACAAAATACATAAAAGTAGAGGAAAATATGAGCTGAAGTTCAAGTAATTGAAAGTGAAATAAAAATCAAATAATAATTTGTATAATCAACAATTAGTATTAGATAGTAATCAAATAGCCATCATATAACAATTTGTATCACTAACAATCATATAAAAATAATATCAAATAAAAATAGATATCAATCACATGACAAAATTTTATTAGATAATAAGTGAATTAGTGTAATTTTTTAATTAACAAACAAGGTAATTGAATAACAATTAGAAGACAATTAAAAGATAATTAGGTGACTATAGAAGACTAACTACTATTTTTGCAAAAAAAAAAAATCAAACCCTTAAACCATGGATTTAATTTTTTTAAATATTTTTTGTCAATCTTACCGTTGCCTATCCCTTGAATGGTCATACAAGCACATAAATTAATATCATATAGTTATGAGCATGTGAAATAGCAATTTCAAGTTAAACATGATATAAAGACAATAATTTAACAAGTGGATAATAGATCTAAAAATAATATATCAATAACCAAACTAGTCATTAAAAAAATTAAAATAAACATTATGAAACTTTAATACCAAAAAATAATTAAAAATACAATTCCAATTTTGACCCTCGAAGATTCGTGTCCCTGTAAAGAGGCTCCAGCAATAAGACATCGTGATTTAAAACTCTTTGCTGTCCTTTTCCGTAAATTCACAACATCAACCTGACACACAACCAACGCACGAGAGAGAAATCAGCGACAGCAAGTACCGGAGCATCAATAAATCTTCTCTCTAAGAAAGAATCTAGAACACTGTGTCAGTCCACAAATTTCTTCGTTCTTCGCTATGAAGTTCATCATCAAATCCTGAGGCTATCAAAGCATTTCAGGTAATCCATTTTCTTGTAGCTGTTTTCGCCTTTTCTATTTCATCATTCTCTGTTTGGTTACCGAGAAAATGCCGCGAATAGCGTAGAGAAATTTAGTGTTCTGTATCTCTGTAGGCTGTCAACGCATTCGCGTCGTTCTTTGCTATGTTGTGAATCGGATTTGGAGCCATTTTTCCTTTGA

mRNA sequence

ATGAGTTGTGTGGGATCCTACGATGAAGAATATCTAGAACAAAATGAATCTAACTCTGACCCTGTTATAGATGGGCCTAGGAGAGGGGAGCGACATGGCTCGAGAGAAAGAAGAGGATTGCATGCCAAGAACATTCAGTCCACAAATTTCTTCGTTCTTCGCTATGAAGTTCATCATCAAATCCTGAGGCTATCAAAGCATTTCAGGCTGTCAACGCATTCGCGTCGTTCTTTGCTATGTTGTGAATCGGATTTGGAGCCATTTTTCCTTTGA

Coding sequence (CDS)

ATGAGTTGTGTGGGATCCTACGATGAAGAATATCTAGAACAAAATGAATCTAACTCTGACCCTGTTATAGATGGGCCTAGGAGAGGGGAGCGACATGGCTCGAGAGAAAGAAGAGGATTGCATGCCAAGAACATTCAGTCCACAAATTTCTTCGTTCTTCGCTATGAAGTTCATCATCAAATCCTGAGGCTATCAAAGCATTTCAGGCTGTCAACGCATTCGCGTCGTTCTTTGCTATGTTGTGAATCGGATTTGGAGCCATTTTTCCTTTGA

Protein sequence

MSCVGSYDEEYLEQNESNSDPVIDGPRRGERHGSRERRGLHAKNIQSTNFFVLRYEVHHQILRLSKHFRLSTHSRRSLLCCESDLEPFFL

Homology

The following BLAST results are available for this feature:

BLAST of PI0025162.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0025162.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0025162.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0025162.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0025162	PI0025162	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0025162.1-exon	PI0025162.1-exon-chr01:6838094..6838160	exon
PI0025162.1-exon	PI0025162.1-exon-chr01:6838275..6838342	exon
PI0025162.1-exon	PI0025162.1-exon-chr01:6840216..6840238	exon
PI0025162.1-exon	PI0025162.1-exon-chr01:6841690..6841804	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0025162.1-cds	PI0025162.1-cds-chr01:6838094..6838160	CDS
PI0025162.1-cds	PI0025162.1-cds-chr01:6838275..6838342	CDS
PI0025162.1-cds	PI0025162.1-cds-chr01:6840216..6840238	CDS
PI0025162.1-cds	PI0025162.1-cds-chr01:6841690..6841804	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0025162.1	PI0025162.1-protein	polypeptide