PI0024135.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0024135.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr03: 24837842 .. 24846523 (+)
Sequence length	1347
RNA-Seq Expression	PI0024135.1
Synteny	PI0024135.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAACGCCTCTGCTTCTGCTCCTGTAAATTTCAACAATCCTTCTTTGAATCAGTTGCTTAATCAACTTACCACCGTCAAGTTAGAACGGAGCAACTATCTGCTATGGAAAACTTTGGCCATGCCAATCCTTCGAGGATATAAGCTGGAAGGTCATCTCACTGGAGAAAGTCAGTGCCCAACCAAGTATCTGCCCATCTCTACAACCAGAGAATTTTCCTCTGGCATTGATGCAGCAACTGCAACCACAGATGGAGCCTCATCCTCACAAGCAACAATTACTCAAATTGTCAATCCTGACTTCGAAAAATGGATCACCACAGATCTGCTACTTCTCGGGTGGTTATATAACTCTATGAATCCTGAAGTGGCAGTACAACTTATGGGTTTCAACAATGCGAAAGATCTATGGGAGGCCATACAAGATCTCTTTGGAGTTCAATCCAGAGCAGAAGAAGACTATCTAAGACAGATGTTTCAAACCACGCGGAAAGGAAGTATGAAGATGGAAGATTATCTGAGGACAATGAAGTCATATGCCGATAGTCTTAGTCAGACTGGAAATTCTGTGTCAATACGATCACTAGTCTCACAAGCTCTCTTAGGACTTGATGAAACTTACAATCCAGTCATTGCAGTAATTCAAGGAAAGCCTGACATCTCCTGGCTTGATATGCAGTCCGAGCTCCTTATATTTGAAAAGCGTCTGGAACATCAGAACTCTCAACGAAACATTGGAAGTACTAGTGGAAACATAATGGCAAATGTTGCCCAAAACAGAGGAACACCTGATCCGCGGCTGACAAACCCTCCATATCAAAATAGTAGTCGATCGTTCAATGGGCAACGTGGAGGACAGAACTTTAGTAACAACAGAGGTCGTGGAAGAGGCAGAGGAAATAAACCTACATGTCAAATCTGCAACAAGTACGGTCACTCAGCTGCTGCCTGCTACAACAGGTTTAATAAAGAGTTCACTGGACCTTCAAATCAAAGTAAGAATGGACAGAATCCAAATGCTTCCACTAGCCAGACACCCCAGACACTCCAGAACCCTGCAGCCTTTGTCACAGCTCAAGGATCAAATCCGTTTGCTACTTCTGAAACAGTTGATGATCCTGCTTGGTATGTTGACAGTGGCGCAACAAGTCACATTACTGCTGACTACAATCATATGACCAATCCTGTTGAGTACTCAGGTAATGAGCAAGTTGTTGTGGGAAATGGTCACAAGCTCCAAATAAACTATACTGGATGTTCTAATTTAATTGTAGGGTCCTCTGTTTTGAGTCTTGATAATCTGCTGTTTGTTCCTGCTATTAAGAAGAATTTGATAAGTGTTTCTAGACTAACACAGGATAATGATGTTTATGTTGAATTTCATGGTGGTTATTGTCTTGTAAAGGACAAGGCTACTGATCAAACACTACTAGAAGGCACACTTAAGGATGGTCTCTATCACCATGAAGGAGCAGTTGTGAAAGGAGAAAGAGGTCATTCGACCAGTGAAGGAGTGGAACAACATAGTTTGCACAAAAATAAGGGTACTGCTGCATTAGTGTTGTCAAGTAATCTCTCACGGACCAATGAAGTAGTATTTAAAACTATTTGGCACAGGAGATTGGGTCATCCATCCTCTGGAGTTTTGAATTCTATAATCAAAAATTGTAATCTGCAACTTAATAGTAATGAAGAAGTTGAGTTTTGTGAATCTTGTCAATTAGGCAAGTCTCATAGGCTGCCGTTTTCTATCTCTCAGTCTCGTGCAAAAATGGCATTTGATCTTGTTCACACTGACTTATGGGGACCGACTCCAGTCATGTCTTGTGAAGGCTTTCGGTATTACATATTGTTTGTCGATGATTTTACTAGATATATTTGGATTTATCCACTTAAGCTAAAAAACGAAGCTATAGAGGCATTCAAACTATTTGCAGCTTATGTTCAAACCCAGTTCAACAAGGTTATCAAAACTCTTCAGTCAGATAATGGAGGTGAGTTTGTCAAGATTCATCAACTGTGCAAAGTGATGGGAACGGTATCACGCTTCTCTTGTCCCTATACCTCAAGTCAGAATGGAAGAGTTGAACGTAAGCATCGCCATGTCATAGAAACAGGGCTGACCCTCTTAGCTCAAGCTACTATGCCTCTAAAATTTTGGTGGGATGCGTTTCTCTCAGCTACAATGCTGATAAATGGCCTGCCAACACCATTGTTACAAGGAAAATCTCCTGTTGAGTTGTTATTTGGACGCACACTGAAATTTTCTGCACTGAAAACATTTGGAAGTGCTTGTTTCCCTTGTCTTCGGTCTTACCAGCCACATAAATTTGGGCCTCACTCTGAAAAATGTACTTATCTAGGCCCTAGTCCAATTCACAAAGGTCATAAGTGCCTCACAAAGGCTGGCCGAATTATTATCTCCAGACATGTGGTTTTTAATGAGCTCAACTTTTCGTTTGCAGAAGAGTCCAATTTTTCCACAGCCATTTCACCTAAGCCCACCTCCCCGTCTCTACTACTTCCCTTGTGGCCCTTACTCAACAGCCCGACCCAATATCCACCTCAGAATGGTCCTTTCCCCCAAGAGTCATAGCCCCATGTGAGTCCAAGCCCAACTCCACCCCCACCTGACCCAAATTTGTCCTTATCCCCTTCTTCTTCTCTTCCACCGCCTGATTCTCATTTCCTGTCACCATCTTCTTCTCCATCTGCACCCTGCACTGCACTAAGCCGTCCTGCCCCTCTGCCTACTCATCCTATGATTACCCGAGGTAAGGCCGGTATTTTCAAACCCAAAGCTCTCGTCTCCACTGCTTCTGTCACCGACTGGTCACAATCTGAGCCCACCTCTGTGCACACTGCCCTAGTTACTCCTCAGTGGAAAGAAGCCATGGATTCAGAAATCTCAGCTCTTTAGCGTAACCAAACGTGGTCCTTAGTTCCTCCCATGTCTGCTCAAAATGTTGTTGGAAGCAAATGGGTCTTTCGTCTCAAGCGGAATGTTGATGGCTCTGTTCAATGGTACAAGGCTCGTCTTGTTGCTAAGGGGTTTCATCAGACGCCTGGAGTTGATTTCTTTGAGACGTTCAGCCCAGTGGTAAAAGGCTCCACCATTCGTGTTGTCCTCTCTCTTGCAGCCTCCACTGGATGGTCTCTTCGTCAGTTGAACTTCAATAATGCCTTTCTCAATGGCTGTCTTAAGGAGAATGTGTTCATGTCTCAGCCTCCTGGCTATGTTGATCCTGCTCATCCCGACTACGTCTGCAAGTTGCACAAGACCATCTATGGCCTCAAGCAAGCTCCTCGAGGCTGGAATGATGCTCTCACTTTTGTCTTGCTTCAGTGGGGTTTCGCTCAATCACGATCCGATACGTCTCTCTTTATCTTTCGACGGCAGCAATCTATTCTGCTTCTTCTCGTGTATGTTGACGATGTCATCCTCACTGGGAATGATTCCTCTCTACTTGACAATCTGATTCGGCGTTTGGACATCGTTTTTTTCCTCAAAGACCTTGGTCAGCTGAGTTACTTTCTTGGTTTTCAACTTCACCGTCTTGAGTCTGGGTTTATTGTGAATCAAGCCAAGTATATGGACGACCTTCTTGAACGTCTTCAACTCACTGATCTGAAACCTGCTCTTTCTCCAAGTGTGTTAGGCAAACAGCTATCTGTTACTGATGGCATTCCTCTGGCTGATCCTTTTATCTACCGTAGTACCATTGGTGCTCTACAATACCTCAGAAACACACGCCCAGATATTGCCTACATCGTCAATCATCTCAGCCAATTCCTTCAACATCCTACTGAGGTCCATTGGCAAGCTGTGAAACGAGTTCTCAGATACATTAGTGGCACCAGGAATTATGGTTTGCTTTTTCAACCAAGCACTGCCTTTAACATATCTACCTACTCTGATGCTAATTGGGTGTCCAACATTGATGATCACAAATCTGTGGTTGCTAATTGTGTGTTTCTTGGGTCCAACCTTGTGTCCTGGTCTTCAAAGAAGCAAACGGCTGTTGCTAGATCAAGCACAGAGTCTGAGTACAGGACACTTGCTCAAGCTACTTCTGAGATCATCTGGCTCAACAGCTCCTCACTGAGCTCGATGTTCCTAAGACTCTCACACCGGTACTTTGGTGTGACAATATGAGTGCCGCTGCTCTTGCAACAAATTCAGTGTTTCATGCCCGGACCAAACATATCGAAATTGACGTCCATTTCATTCGGGACCATGTTCTTCGTGGAGCTCTTGACATTCGGTACATTCCCTCTTCTGATCAACTTGCTGATTGTCTCACGAAGTCTCTCACTCACACTCAGTTTCATATGTTACGCACCAAACTCGGGGTTGTTGACTTACCCCCTCATTTGAGGGGGGATGTTAGACAACAATGCCAACTCAGTGCCTCGTCATCAGCTTCGTCCAAGTCATGAGACATGTCATGGAGTGATGTGGCCCATTCCAGAAGAATCCTTTGTTGTAAATTTGTTATTTCTGCCCTTTGCTCTTGTCCAATCCCTTGTCTACAGCTGTCACTATTTCTGTTATTTCTTTTATTCTTTTCTGAAATCAACGGGATCTCAAATGTATAAGTTGTTGTTGCTTCATGCTAAAATTGTACTGTGAAATACTATTACAAAAAATTAGTATTTCAGAAATCTCTTCTTCTTCAGTTCTTCACTATGTCTACCATCAATTCCTGATCTTGCATATTGTCAAGAGTTTTAGGTGCAGTTGAATGTGCCAAATTTTAATCCTTTGATTGCATCATTTAGAGAGTGCGATAAGAAAGAGAGATGAGATAGCTTATAGGAGTTGTTTCGGGTGTTGAGTTGAGATAAGATGTCTAAAATTTATATGTCAAGAGAGATTATATGTTTGGAAAGTTCATATGTCTGTGTTTGGGGTGCAAAGTTGAGTTTATATGTCAACGATGTCTAATGCAATTTTTTAATTTTAAATAATATGTTTTTTATACCTAATTTTGTTTTTAAAATCTTTTATTCAATAATTTATCTTTGCTTGAATAAAATATGAATTATATTTTCTTTTGTTTTTTTTTCTTTCTTTTTGGTAATGAACAATGATGAATCCTCTACATTTCTTGCACAAACATAGATAAATAAAATGTAACAAGAAAAAAGAAAATTCAAAACTTTTTACAACTAATTTTTTCCATGAATTTCATCATTTTCATTTTCAACAATTCCACATTCAATTCCTCCAAATTTGGAGAATTATCAAAGAACAAATCTCCATTTTCACTAATTATTGATATAAAATATTTTTAAAAAACAATCTCCATAAAAAAAAAATTTTGTTTTTTTGTTCCGCCATTCAATATATACTTTTCTAAATCCTTAACACTCATTTGATATGTAAATGCAATTAAATAAAAATATAATAGTGTGTGTGTGTATATATATATATATATGGTTAACAAAAAACCAATTTCATGCCTACAAAAAAATATTAGATTGTTGTTGAAGTTGATTGATAGATGTAGTCATTACCGTTCTTGGTTGCCTAGGGTAAATGTTGGTATTGATTGTTAGAGGTGGTTGTCACTTGTCATTGAAATTGATTATCAAAGGTGATTTTCGTTGAAGTTTATCGTAGAGGTAGTTGCTGGAGCCCGAAGTTGAAGGTGGTTGTTGAAGTTAATTATCAAAAGTGATTTTTACCAAAGTTTGTAGTTGTAGGAGGTTGTCAGAGATAGAAATTGGTTGCACGAAGGTGATCTTGGAGTTGGTCAAAGTTTGTTGTTGGAGCCTGGAATTCGTATTGTGAAGTTAGTCATCAAAGTTGATTTCGTTGGTGTTTGTTATTGGAAATGGTTACCGAAGCTCAAAATTGGTCATTGGAGTTGGTCACGCAAAGATGATTGTTGGAGGTGGTCGTCGGAGCCTGAAATCGGTCATTAGAGTTGGACGTGTGAAAGTGGTCGTCAAAGTTGGTTCTCGAAGCGTGGCAATGGTAATCATCAATGGTGGTTGATGGGTGAACCCATTGGAAACATTAGGGAGAAGGGAGAAAATATTGGGGAGAGTTGGGGTGAGTTGGTATAATATACCGACTCAACTCCACCGACATGCAAAATTGGTGTGCCAAACACCTCTTTTAATCTCTTCAATTACTAGACCAACTTCGATTGTGGTGGGTTATCTTTTATGACACAAACTATATGAATGAATGTGTATTGACTCAAATTGAAAATCTTACACCCTACCATGTTCAATTCATTAGATTAATTTGTAACGATTGGTTTTGGAGAATTTAGTTTTTGTCAATTGTACGTGTGTGAAGTTGATATTTGTTAGTTGTATGTATAATGTACAAGTTTGAAACTAATTGTTGTATTTGGTTATGATAACACAAAGTTCTTTTTTTTTTTTAAAGAAAAATATCATTAATAGCTAAATAGAGTCCAACAAGCAACACTCCTCATAGGCAGAGGAGAACCAACCCAGTACAAAACAATCCCTGCATCAATTTTAGAGGAGGAGGAAGCGGGGGACAAAACAAGCCCTTCAACTATCCAGAGAAACAATCTTGTAGGCAAGGTAATGGGCAACATTATTCGTGGAGTGCGAACACCACAAGAAAGAGATGACCCCAACCAGCGAAGCAGGGACTTAATTTTCAAAATAAAACAAGACAGCTCAGATAAATCAACCCCCACGCCATTGATAGCATTAATAAGCTTAGCGCAATTAGACTCCACACAAAAAACGAAAATAGAACTATTGTCAAACCTGAAAATAATATAAGACAACCCTTTTATCACAACAAGGGCTTCCAGGTTTTTGGTGCCTGTAATTTGTAGACACCTTTGGTGCCCCAGTTATGATAATGCAAAGTTATTCTTTGGAGTTGTTTGAAGTTTGTTTTTCGTTGTGCTACAAACTTTATGTAAGTGATTTGATGTCATTTGTTGTTAGTACAATGTTAGATGCCATGAGTTCATGAAATAAATTAAAAAATTTCAGGTTAAAAGTCTGTTTGGGGTTGATTATAGGTGACATATATTAGGGTCCCAATAACCCATTTTTTTTTTCAAATTGGTATAATTGATGGGTAAAAAACATCAACAAAAGTGTATTGTTGACATTAAAAAACCAATGGTAAAAATATATATTCACATAAAATAATATAGTTTCCTTGACATACAAAAAAACATCAATAAAAAGAGCTACCTTGACGTATTTAAAAAATAATTGATTGACAAAAAAAATATCAATGTTACTTTATTTTGACGTTCGAAAAGTATCGACAAAAGAATTTTTCTTTACCAATTTTTTCATATAGATGATGGGCAAAAAAAGTCAGAGTATCATTTCTTGAAGGCCAAGAACTTCAAGAAAGGGTTTTAGGTGATCTTGTTTTGTCATCAGTTTCTTGATGATTAGCCTTTCTTGATGTTTGCATTCTTGACATTTATTGACTATCAAAGTAGACATTTTTTTTTACATTTTTCTCCATAAAAAAAGGTCAAAATTTTAGTGTAGTGATTAGATTCAATTACACATTTAGTTTTTGAACTTTCATGTATGTGTAAAAAAACTTTTCTTTCTTATAACCCAAGTTTCATATTACGACCTTTACACCATATTTTGAAAATAATGAAACCTTTTGTCATTGTCAAAACACATAAAAAAGTTTGAATTGTTAACCCTCACTTGCCATCAATGGGTATTCACAATAGCAACCACACTAGAAGTGAGAGATTGAGGAGGAGCAGTAGAACAAAAGTGATAAAGTTAGAAGAAACATGAGTGCAAAAGATGAAGGAGAACAAGTCATAACTTACAAGAATGGTATTGTATTAGATTAGTTAAACAAATAATGGAGGAAGAGCACAAAGGAGGAAGAAAGAGTCATAAAGTGTGGAGTATAATCATATGGATGAATTTAATTTCACACTCACTAAAATAAGAAGGGAAATGCAATATATATAATTAACACACCTACTCTAATAGAGTGTCATATTCAAATATTTTCTTAATTTGGAGTTGATGACATTACAAATACAAAATCAAAATCAAGATCTTTTGTAAAAAAATTTTAAAAACATTTAAACAATATAAGTTCATTAAATATTTCTATCTAACAATTGTGATGAAGAATTGTAGCTTGTGGATTACTTGAGTATTCTTAAACATAACAAAATTGTTTAATAAATTGATTAATTTTTAATTTGTTTTTAATATGTCTAATTTTAACGTTACAATGTTATTACAAACAAACGAAGTATTGGCATAGATGGATGACACTCCACGATCGCCATTGGAGGCTTTGCAGTAGAGAATTGTAGGTTATTTCTGAACCAGTTAAAGCTCAATCGTCTGTTTACTTCGAGGTAACCATTTTTCTTTTTCAATGAAGTTTCGAGACTGCAAATTAAGTCGCTGAAGTAATTTCATAGGAAAATTCCACTTTCAGGATTTTTCCAAACGACATATATCTACCCAACCCCTGACAAAAGTATGATCAATTGAATAACTACGAATCAATCAAACCCCTAATTATTATTATTTTTTTCTTTGTTGACCAACCGGGATGTAGCCGTCACGATATTAGTTTTTAAATTCTAATTTCAATAGTTTAAAACGACTCTTTTTACGAATCTGGTGTCTGATTTATGGAAGTCTACTGTTTCAGACCTTAAATTGA

mRNA sequence

ATGGCCAACGCCTCTGCTTCTGCTCCTGTAAATTTCAACAATCCTTCTTTGAATCAGTTGCTTAATCAACTTACCACCGTCAAGTTAGAACGGAGCAACTATCTGCTATGGAAAACTTTGGCCATGCCAATCCTTCGAGGATATAAGCTGGAAGGTCATCTCACTGGAGAAAGTCAGTGCCCAACCAAGTATCTGCCCATCTCTACAACCAGAGAATTTTCCTCTGGCATTGATGCAGCAACTGCAACCACAGATGGAGCCTCATCCTCACAAGCAACAATTACTCAAATTGTCAATCCTGACTTCGAAAAATGGATCACCACAGATCTGCTACTTCTCGGGTGGTTATATAACTCTATGAATCCTGAAGTGGCAGTACAACTTATGGGTTTCAACAATGCGAAAGATCTATGGGAGGCCATACAAGATCTCTTTGGAGTTCAATCCAGAGCAGAAGAAGACTATCTAAGACAGATGTTTCAAACCACGCGGAAAGGAAGTATGAAGATGGAAGATTATCTGAGGACAATGAAGTCATATGCCGATAGTCTTAGTCAGACTGGAAATTCTGTGTCAATACGATCACTAGTCTCACAAGCTCTCTTAGGACTTGATGAAACTTACAATCCAGTCATTGCAGTAATTCAAGGAAAGCCTGACATCTCCTGGCTTGATATGCAGTCCGAGCTCCTTATATTTGAAAAGCGTCTGGAACATCAGAACTCTCAACGAAACATTGGAAGTACTAGTGGAAACATAATGGCAAATGTTGCCCAAAACAGAGGAACACCTGATCCGCGGCTGACAAACCCTCCATATCAAAATAGTAGTCGATCGTTCAATGGGCAACGTGGAGGACAGAACTTTAGTAACAACAGAGGTCGTGGAAGAGGCAGAGGAAATAAACCTACATGTCAAATCTGCAACAAGTACGGTCACTCAGCTGCTGCCTGCTACAACAGGTTTAATAAAGAGTTCACTGGACCTTCAAATCAAAGTAAGAATGGACAGAATCCAAATGCTTCCACTAGCCAGACACCCCAGACACTCCAGAACCCTGCAGCCTTTGTCACAGCTCAAGGATCAAATCCGTTTGCTACTTCTGAAACATCATCAAAGTTGATTTCGTTGGTGTTTGTTATTGGAAATGGTTACCGAAGCTCAAAATTGGTCATTGGAGTTGGTCACGCAAAGATGATTGTTGGAGGTGGTCGTCGGAGCCTGAAATCGGTCATTAGAGTTGGACGTGTGAAAGTGGTCGTCAAAGTTGGTTCTCGAAGCGTGGCAATGGTTATTTCTGAACCAGTTAAAGCTCAATCGTCTGTTTACTTCGAGACCTTAAATTGA

Coding sequence (CDS)

ATGGCCAACGCCTCTGCTTCTGCTCCTGTAAATTTCAACAATCCTTCTTTGAATCAGTTGCTTAATCAACTTACCACCGTCAAGTTAGAACGGAGCAACTATCTGCTATGGAAAACTTTGGCCATGCCAATCCTTCGAGGATATAAGCTGGAAGGTCATCTCACTGGAGAAAGTCAGTGCCCAACCAAGTATCTGCCCATCTCTACAACCAGAGAATTTTCCTCTGGCATTGATGCAGCAACTGCAACCACAGATGGAGCCTCATCCTCACAAGCAACAATTACTCAAATTGTCAATCCTGACTTCGAAAAATGGATCACCACAGATCTGCTACTTCTCGGGTGGTTATATAACTCTATGAATCCTGAAGTGGCAGTACAACTTATGGGTTTCAACAATGCGAAAGATCTATGGGAGGCCATACAAGATCTCTTTGGAGTTCAATCCAGAGCAGAAGAAGACTATCTAAGACAGATGTTTCAAACCACGCGGAAAGGAAGTATGAAGATGGAAGATTATCTGAGGACAATGAAGTCATATGCCGATAGTCTTAGTCAGACTGGAAATTCTGTGTCAATACGATCACTAGTCTCACAAGCTCTCTTAGGACTTGATGAAACTTACAATCCAGTCATTGCAGTAATTCAAGGAAAGCCTGACATCTCCTGGCTTGATATGCAGTCCGAGCTCCTTATATTTGAAAAGCGTCTGGAACATCAGAACTCTCAACGAAACATTGGAAGTACTAGTGGAAACATAATGGCAAATGTTGCCCAAAACAGAGGAACACCTGATCCGCGGCTGACAAACCCTCCATATCAAAATAGTAGTCGATCGTTCAATGGGCAACGTGGAGGACAGAACTTTAGTAACAACAGAGGTCGTGGAAGAGGCAGAGGAAATAAACCTACATGTCAAATCTGCAACAAGTACGGTCACTCAGCTGCTGCCTGCTACAACAGGTTTAATAAAGAGTTCACTGGACCTTCAAATCAAAGTAAGAATGGACAGAATCCAAATGCTTCCACTAGCCAGACACCCCAGACACTCCAGAACCCTGCAGCCTTTGTCACAGCTCAAGGATCAAATCCGTTTGCTACTTCTGAAACATCATCAAAGTTGATTTCGTTGGTGTTTGTTATTGGAAATGGTTACCGAAGCTCAAAATTGGTCATTGGAGTTGGTCACGCAAAGATGATTGTTGGAGGTGGTCGTCGGAGCCTGAAATCGGTCATTAGAGTTGGACGTGTGAAAGTGGTCGTCAAAGTTGGTTCTCGAAGCGTGGCAATGGTTATTTCTGAACCAGTTAAAGCTCAATCGTCTGTTTACTTCGAGACCTTAAATTGA

Protein sequence

MANASASAPVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHLTGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATITQIVNPDFEKWITTDLLLLGWLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIRSLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFEKRLEHQNSQRNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNRGRGRGRGNKPTCQICNKYGHSAAACYNRFNKEFTGPSNQSKNGQNPNASTSQTPQTLQNPAAFVTAQGSNPFATSETSSKLISLVFVIGNGYRSSKLVIGVGHAKMIVGGGRRSLKSVIRVGRVKVVVKVGSRSVAMVISEPVKAQSSVYFETLN

Homology

[Close]

BLAST of PI0024135.1 vs. ExPASy TrEMBL
Match: A0A5A7SIT7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00360 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 4.8e-98
Identity = 211/376 (56.12%), Postives = 257/376 (68.35%), Query Frame = 0


Query: 1   MANASASA------PVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHL 60
           MANA  +A         F+NP LNQ+LNQL TVKL+R NYLLWKTLA+PIL+GYKLEGHL
Sbjct: 1   MANAQPTAAPPSLSSAGFSNPPLNQILNQLATVKLDRKNYLLWKTLALPILKGYKLEGHL 60

Query: 61  TGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATITQIVNPDFEKWITTDLLLLG 120
           TGE+ CP+ ++ +S +   ++  +     T GASSS     +IVN  FE+W+TTDLLLLG
Sbjct: 61  TGETPCPSHFV-LSASSSNTTVTEEGADATIGASSS--ITPRIVNSLFEQWVTTDLLLLG 120

Query: 121 WLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYL 180
           WLYNSM P+VA+QLMGF N +DLW+A QD FGVQSRAEED+LRQM QTTRKG+ KME+YL
Sbjct: 121 WLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGNTKMEEYL 180

Query: 181 RTMKSYADSLSQTGNSVSIRSLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFE 240
             MK+  D+L Q G+ V  R+L+SQ LLGLDE YN VI VIQGKPDISWLDMQS+LLIFE
Sbjct: 181 LVMKTNVDNLGQVGSPVPRRALISQVLLGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE 240

Query: 241 KRLEHQNSQRNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNRG 300
           K L+HQN+Q+      GNI  + A N         N    +S++ F G    Q+FS  RG
Sbjct: 241 KILKHQNTQKK-KKKKGNITQSPALNMA--QRFALNGQRNHSNKKFYGY-NRQHFSGQRG 300

Query: 301 RGRGRGNKPTCQICNKYGHSAAACYNRFNKEFTGPSNQSKNGQNPNASTSQTPQTLQNPA 360
                 N PTCQ+C KYGHSA  CYNRFNKEF+ P  Q +N  + N S S       NPA
Sbjct: 301 ---NLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQDRNEHSSNGSVS------PNPA 360

Query: 361 AFVTAQGSNPFATSET 371
            FV+ Q + PFAT +T
Sbjct: 361 VFVSTQNATPFATPDT 360

[Close]

BLAST of PI0024135.1 vs. ExPASy TrEMBL
Match: A0A1S4E1U6 (uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 8.7e-84
Identity = 193/377 (51.19%), Postives = 235/377 (62.33%), Query Frame = 0


Query: 1   MANASASA------PVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHL 60
           MANA  +A         F+NP LNQ+LNQLTTVKL+R NYLLWKTLA+PIL+ YKLEGHL
Sbjct: 1   MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHL 60

Query: 61  TGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATITQIVNPDFEKWITTDLLLLG 120
           T E+ CP+ ++ +S +   ++  +     T GASSS     +IVNP FE+W+TTDLLLLG
Sbjct: 61  TAETPCPSHFV-LSASSSNTTVTEEGADATIGASSS--ITPRIVNPLFEQWVTTDLLLLG 120

Query: 121 WLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYL 180
           WLYNSM P+VA+QLMGF N +DLW+A QD FGVQSRAEED+LRQM QTTRK         
Sbjct: 121 WLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRK--------- 180

Query: 181 RTMKSYADSLSQTGNSVSIRSLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFE 240
                                       GLDE YN VI VIQGKPDISWLDMQS+LLIFE
Sbjct: 181 ----------------------------GLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE 240

Query: 241 KRLEHQNSQ-RNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNR 300
           KRL+HQN+Q +N G+ + +   N+AQ          N     S++ F G    Q+FS  R
Sbjct: 241 KRLKHQNTQKKNTGNITQSPALNMAQRFA------LNGQRNQSNKKFYGY-NRQHFSGQR 300

Query: 301 GRGRGRGNKPTCQICNKYGHSAAACYNRFNKEFTGPSNQSKNGQNPNASTSQTPQTLQNP 360
           G      N PTCQ+C KYGHSA  CYNRFNKEF+ P  Q++N  + N S S       NP
Sbjct: 301 G---NLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSVS------PNP 321

Query: 361 AAFVTAQGSNPFATSET 371
           A FV+ Q + PFAT +T
Sbjct: 361 AVFVSTQNATPFATPDT 321

[Close]

BLAST of PI0024135.1 vs. ExPASy TrEMBL
Match: A0A1S4E1V2 (uncharacterized protein LOC107991581 isoform X3 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 8.7e-84
Identity = 193/377 (51.19%), Postives = 235/377 (62.33%), Query Frame = 0


Query: 1   MANASASA------PVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHL 60
           MANA  +A         F+NP LNQ+LNQLTTVKL+R NYLLWKTLA+PIL+ YKLEGHL
Sbjct: 1   MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHL 60

Query: 61  TGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATITQIVNPDFEKWITTDLLLLG 120
           T E+ CP+ ++ +S +   ++  +     T GASSS     +IVNP FE+W+TTDLLLLG
Sbjct: 61  TAETPCPSHFV-LSASSSNTTVTEEGADATIGASSS--ITPRIVNPLFEQWVTTDLLLLG 120

Query: 121 WLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYL 180
           WLYNSM P+VA+QLMGF N +DLW+A QD FGVQSRAEED+LRQM QTTRK         
Sbjct: 121 WLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRK--------- 180

Query: 181 RTMKSYADSLSQTGNSVSIRSLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFE 240
                                       GLDE YN VI VIQGKPDISWLDMQS+LLIFE
Sbjct: 181 ----------------------------GLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE 240

Query: 241 KRLEHQNSQ-RNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNR 300
           KRL+HQN+Q +N G+ + +   N+AQ          N     S++ F G    Q+FS  R
Sbjct: 241 KRLKHQNTQKKNTGNITQSPALNMAQRFA------LNGQRNQSNKKFYGY-NRQHFSGQR 300

Query: 301 GRGRGRGNKPTCQICNKYGHSAAACYNRFNKEFTGPSNQSKNGQNPNASTSQTPQTLQNP 360
           G      N PTCQ+C KYGHSA  CYNRFNKEF+ P  Q++N  + N S S       NP
Sbjct: 301 G---NLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSVS------PNP 321

Query: 361 AAFVTAQGSNPFATSET 371
           A FV+ Q + PFAT +T
Sbjct: 361 AVFVSTQNATPFATPDT 321

[Close]

BLAST of PI0024135.1 vs. ExPASy TrEMBL
Match: A0A5D3C373 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002430 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 1.8e-68
Identity = 154/263 (58.56%), Postives = 188/263 (71.48%), Query Frame = 0


Query: 124 VAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADS 183
           +A+QLMGF NAKDLWEA QDLFGVQSRAEED+LRQMFQTTRK     EDYLR MK+ +D 
Sbjct: 45  IAIQLMGFTNAKDLWEATQDLFGVQSRAEEDFLRQMFQTTRKVRASYEDYLRIMKTNSDK 104

Query: 184 LSQTGNSVSIRSLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFEKRLEHQNSQ 243
           L Q G+ V  R+ +SQALLGLDE YNPVIAVIQGKP+ISW+DMQSELL FEKRLEHQ++Q
Sbjct: 105 LGQAGSPVPKRAFISQALLGLDEVYNPVIAVIQGKPEISWIDMQSELLTFEKRLEHQDTQ 164

Query: 244 RNIGSTSGNIMANVAQNRGTPDPR-LTNPPYQNSSR-SFNGQRGGQNFSNNRGRGRGRGN 303
           +N  +   N++ N+AQNR + D R  +N  +  ++R +  GQRGG  F+  RGRG+GRGN
Sbjct: 165 KNTENIIQNVV-NIAQNRNSSDFRKYSNHQFHGNNRNNSQGQRGG--FNIGRGRGKGRGN 224

Query: 304 KPTCQICNKYGHSAAACYNRFNKEFTGPSNQSKNGQNPNASTSQTPQTLQNPAAFVTAQG 363
           KPTCQ+C KYGHSA  CYNRFNKEF  P  Q +  Q+ N S         N    VT Q 
Sbjct: 225 KPTCQVCEKYGHSALVCYNRFNKEFLSPLVQDRGAQSSNFSKH------SNLTVLVTGQS 284

Query: 364 SNPFATSETSSKLISLVFVIGNG 385
            N FAT++T   +I+L + I +G
Sbjct: 285 VNQFATADT---VINLNWYIDSG 295

[Close]

BLAST of PI0024135.1 vs. ExPASy TrEMBL
Match: A0A1S4E1U9 (uncharacterized protein LOC107991581 isoform X4 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.1e-67
Identity = 167/338 (49.41%), Postives = 205/338 (60.65%), Query Frame = 0


Query: 1   MANASASA------PVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHL 60
           MANA  +A         F+NP LNQ+LNQLTTVKL+R NYLLWKTLA+PIL+ YKLEGHL
Sbjct: 1   MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHL 60

Query: 61  TGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATITQIVNPDFEKWITTDLLLLG 120
           T E+ CP+ ++ +S +   ++  +     T GASSS     +IVNP FE+W+TTDLLLLG
Sbjct: 61  TAETPCPSHFV-LSASSSNTTVTEEGADATIGASSS--ITPRIVNPLFEQWVTTDLLLLG 120

Query: 121 WLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYL 180
           WLYNSM P+VA+QLMGF N +DLW+A QD FGVQSRAEED+LRQM QTTRK         
Sbjct: 121 WLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRK--------- 180

Query: 181 RTMKSYADSLSQTGNSVSIRSLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFE 240
                                       GLDE YN VI VIQGKPDISWLDMQS+LLIFE
Sbjct: 181 ----------------------------GLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE 240

Query: 241 KRLEHQNSQ-RNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNR 300
           KRL+HQN+Q +N G+ + +   N+AQ          N     S++ F G    Q+FS  R
Sbjct: 241 KRLKHQNTQKKNTGNITQSPALNMAQRFA------LNGQRNQSNKKFYGY-NRQHFSGQR 288

Query: 301 GRGRGRGNKPTCQICNK--YGHSAAACYNRFN-KEFTG 329
           G      N PTCQ+C+     H    C N  N  E++G
Sbjct: 301 G---NLNNGPTCQLCDSGATNHVTRECSNMTNPTEYSG 288

[Close]

BLAST of PI0024135.1 vs. NCBI nr
Match: KAA0026100.1 (uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa])

HSP 1 Score: 368.2 bits (944), Expect = 9.8e-98
Identity = 211/376 (56.12%), Postives = 257/376 (68.35%), Query Frame = 0


Query: 1   MANASASA------PVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHL 60
           MANA  +A         F+NP LNQ+LNQL TVKL+R NYLLWKTLA+PIL+GYKLEGHL
Sbjct: 1   MANAQPTAAPPSLSSAGFSNPPLNQILNQLATVKLDRKNYLLWKTLALPILKGYKLEGHL 60

Query: 61  TGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATITQIVNPDFEKWITTDLLLLG 120
           TGE+ CP+ ++ +S +   ++  +     T GASSS     +IVN  FE+W+TTDLLLLG
Sbjct: 61  TGETPCPSHFV-LSASSSNTTVTEEGADATIGASSS--ITPRIVNSLFEQWVTTDLLLLG 120

Query: 121 WLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYL 180
           WLYNSM P+VA+QLMGF N +DLW+A QD FGVQSRAEED+LRQM QTTRKG+ KME+YL
Sbjct: 121 WLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGNTKMEEYL 180

Query: 181 RTMKSYADSLSQTGNSVSIRSLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFE 240
             MK+  D+L Q G+ V  R+L+SQ LLGLDE YN VI VIQGKPDISWLDMQS+LLIFE
Sbjct: 181 LVMKTNVDNLGQVGSPVPRRALISQVLLGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE 240

Query: 241 KRLEHQNSQRNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNRG 300
           K L+HQN+Q+      GNI  + A N         N    +S++ F G    Q+FS  RG
Sbjct: 241 KILKHQNTQKK-KKKKGNITQSPALNMA--QRFALNGQRNHSNKKFYGY-NRQHFSGQRG 300

Query: 301 RGRGRGNKPTCQICNKYGHSAAACYNRFNKEFTGPSNQSKNGQNPNASTSQTPQTLQNPA 360
                 N PTCQ+C KYGHSA  CYNRFNKEF+ P  Q +N  + N S S       NPA
Sbjct: 301 ---NLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQDRNEHSSNGSVS------PNPA 360

Query: 361 AFVTAQGSNPFATSET 371
            FV+ Q + PFAT +T
Sbjct: 361 VFVSTQNATPFATPDT 360

[Close]

BLAST of PI0024135.1 vs. NCBI nr
Match: XP_016902203.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo])

HSP 1 Score: 320.9 bits (821), Expect = 1.8e-83
Identity = 193/377 (51.19%), Postives = 235/377 (62.33%), Query Frame = 0


Query: 1   MANASASA------PVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHL 60
           MANA  +A         F+NP LNQ+LNQLTTVKL+R NYLLWKTLA+PIL+ YKLEGHL
Sbjct: 1   MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHL 60

Query: 61  TGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATITQIVNPDFEKWITTDLLLLG 120
           T E+ CP+ ++ +S +   ++  +     T GASSS     +IVNP FE+W+TTDLLLLG
Sbjct: 61  TAETPCPSHFV-LSASSSNTTVTEEGADATIGASSS--ITPRIVNPLFEQWVTTDLLLLG 120

Query: 121 WLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYL 180
           WLYNSM P+VA+QLMGF N +DLW+A QD FGVQSRAEED+LRQM QTTRK         
Sbjct: 121 WLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRK--------- 180

Query: 181 RTMKSYADSLSQTGNSVSIRSLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFE 240
                                       GLDE YN VI VIQGKPDISWLDMQS+LLIFE
Sbjct: 181 ----------------------------GLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE 240

Query: 241 KRLEHQNSQ-RNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNR 300
           KRL+HQN+Q +N G+ + +   N+AQ          N     S++ F G    Q+FS  R
Sbjct: 241 KRLKHQNTQKKNTGNITQSPALNMAQRFA------LNGQRNQSNKKFYGY-NRQHFSGQR 300

Query: 301 GRGRGRGNKPTCQICNKYGHSAAACYNRFNKEFTGPSNQSKNGQNPNASTSQTPQTLQNP 360
           G      N PTCQ+C KYGHSA  CYNRFNKEF+ P  Q++N  + N S S       NP
Sbjct: 301 G---NLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSVS------PNP 321

Query: 361 AAFVTAQGSNPFATSET 371
           A FV+ Q + PFAT +T
Sbjct: 361 AVFVSTQNATPFATPDT 321

[Close]

BLAST of PI0024135.1 vs. NCBI nr
Match: XP_016902197.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo])

HSP 1 Score: 320.9 bits (821), Expect = 1.8e-83
Identity = 193/377 (51.19%), Postives = 235/377 (62.33%), Query Frame = 0


Query: 1   MANASASA------PVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHL 60
           MANA  +A         F+NP LNQ+LNQLTTVKL+R NYLLWKTLA+PIL+ YKLEGHL
Sbjct: 1   MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHL 60

Query: 61  TGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATITQIVNPDFEKWITTDLLLLG 120
           T E+ CP+ ++ +S +   ++  +     T GASSS     +IVNP FE+W+TTDLLLLG
Sbjct: 61  TAETPCPSHFV-LSASSSNTTVTEEGADATIGASSS--ITPRIVNPLFEQWVTTDLLLLG 120

Query: 121 WLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYL 180
           WLYNSM P+VA+QLMGF N +DLW+A QD FGVQSRAEED+LRQM QTTRK         
Sbjct: 121 WLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRK--------- 180

Query: 181 RTMKSYADSLSQTGNSVSIRSLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFE 240
                                       GLDE YN VI VIQGKPDISWLDMQS+LLIFE
Sbjct: 181 ----------------------------GLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE 240

Query: 241 KRLEHQNSQ-RNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNR 300
           KRL+HQN+Q +N G+ + +   N+AQ          N     S++ F G    Q+FS  R
Sbjct: 241 KRLKHQNTQKKNTGNITQSPALNMAQRFA------LNGQRNQSNKKFYGY-NRQHFSGQR 300

Query: 301 GRGRGRGNKPTCQICNKYGHSAAACYNRFNKEFTGPSNQSKNGQNPNASTSQTPQTLQNP 360
           G      N PTCQ+C KYGHSA  CYNRFNKEF+ P  Q++N  + N S S       NP
Sbjct: 301 G---NLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSVS------PNP 321

Query: 361 AAFVTAQGSNPFATSET 371
           A FV+ Q + PFAT +T
Sbjct: 361 AVFVSTQNATPFATPDT 321

[Close]

BLAST of PI0024135.1 vs. NCBI nr
Match: TYK05754.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 270.0 bits (689), Expect = 3.6e-68
Identity = 154/263 (58.56%), Postives = 188/263 (71.48%), Query Frame = 0


Query: 124 VAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADS 183
           +A+QLMGF NAKDLWEA QDLFGVQSRAEED+LRQMFQTTRK     EDYLR MK+ +D 
Sbjct: 45  IAIQLMGFTNAKDLWEATQDLFGVQSRAEEDFLRQMFQTTRKVRASYEDYLRIMKTNSDK 104

Query: 184 LSQTGNSVSIRSLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFEKRLEHQNSQ 243
           L Q G+ V  R+ +SQALLGLDE YNPVIAVIQGKP+ISW+DMQSELL FEKRLEHQ++Q
Sbjct: 105 LGQAGSPVPKRAFISQALLGLDEVYNPVIAVIQGKPEISWIDMQSELLTFEKRLEHQDTQ 164

Query: 244 RNIGSTSGNIMANVAQNRGTPDPR-LTNPPYQNSSR-SFNGQRGGQNFSNNRGRGRGRGN 303
           +N  +   N++ N+AQNR + D R  +N  +  ++R +  GQRGG  F+  RGRG+GRGN
Sbjct: 165 KNTENIIQNVV-NIAQNRNSSDFRKYSNHQFHGNNRNNSQGQRGG--FNIGRGRGKGRGN 224

Query: 304 KPTCQICNKYGHSAAACYNRFNKEFTGPSNQSKNGQNPNASTSQTPQTLQNPAAFVTAQG 363
           KPTCQ+C KYGHSA  CYNRFNKEF  P  Q +  Q+ N S         N    VT Q 
Sbjct: 225 KPTCQVCEKYGHSALVCYNRFNKEFLSPLVQDRGAQSSNFSKH------SNLTVLVTGQS 284

Query: 364 SNPFATSETSSKLISLVFVIGNG 385
            N FAT++T   +I+L + I +G
Sbjct: 285 VNQFATADT---VINLNWYIDSG 295

[Close]

BLAST of PI0024135.1 vs. NCBI nr
Match: XP_016902205.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo])

HSP 1 Score: 267.3 bits (682), Expect = 2.4e-67
Identity = 167/338 (49.41%), Postives = 205/338 (60.65%), Query Frame = 0


Query: 1   MANASASA------PVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHL 60
           MANA  +A         F+NP LNQ+LNQLTTVKL+R NYLLWKTLA+PIL+ YKLEGHL
Sbjct: 1   MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHL 60

Query: 61  TGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATITQIVNPDFEKWITTDLLLLG 120
           T E+ CP+ ++ +S +   ++  +     T GASSS     +IVNP FE+W+TTDLLLLG
Sbjct: 61  TAETPCPSHFV-LSASSSNTTVTEEGADATIGASSS--ITPRIVNPLFEQWVTTDLLLLG 120

Query: 121 WLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYL 180
           WLYNSM P+VA+QLMGF N +DLW+A QD FGVQSRAEED+LRQM QTTRK         
Sbjct: 121 WLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRK--------- 180

Query: 181 RTMKSYADSLSQTGNSVSIRSLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFE 240
                                       GLDE YN VI VIQGKPDISWLDMQS+LLIFE
Sbjct: 181 ----------------------------GLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE 240

Query: 241 KRLEHQNSQ-RNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNR 300
           KRL+HQN+Q +N G+ + +   N+AQ          N     S++ F G    Q+FS  R
Sbjct: 241 KRLKHQNTQKKNTGNITQSPALNMAQRFA------LNGQRNQSNKKFYGY-NRQHFSGQR 288

Query: 301 GRGRGRGNKPTCQICNK--YGHSAAACYNRFN-KEFTG 329
           G      N PTCQ+C+     H    C N  N  E++G
Sbjct: 301 G---NLNNGPTCQLCDSGATNHVTRECSNMTNPTEYSG 288

[Close]

BLAST of PI0024135.1 vs. TAIR 10
Match: AT5G48050.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 1.2e-08
Identity = 63/278 (22.66%), Postives = 118/278 (42.45%), Query Frame = 0


Query: 26  TVKLERSNYLLWKTLAMPILRGYKLEGHLTGESQCPTKYLPISTTREFSSGIDAATATTD 85
           T+ L + NY +W+ L   +   + + GH+ G                             
Sbjct: 25  TLDLNKLNYDVWRELFETLCLSFGVLGHIDG----------------------------- 84

Query: 86  GASSSQATITQIVNPDFEKWITTDLLLLGWLYNSMNPEVAVQLMGFN-NAKDLWEAIQDL 145
             SS+   +T+      ++W   D L+  W+Y ++   +   ++     A+DLW ++++L
Sbjct: 85  --SSTPTPMTE------KRWKERDGLVKMWIYGTITDSLLDTIIKVGCTARDLWLSLENL 144

Query: 146 FGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIRSLVSQALLGL 205
           F     A         +TT    + + +Y + +KS +D L+   + +S R LV   L GL
Sbjct: 145 FRDNKEARALQFENELRTTTIDDLSVHEYCQKLKSLSDLLTNVDSPISDRVLVMHLLNGL 204

Query: 206 DETYNPVIAVIQGK-PDISWLDMQSELLIFEKRLEHQNSQRNIGSTSGNIMANVAQNRGT 265
            E Y+ ++ VI+ K P  S+ + +S LL+ E RL ++ S+ ++  T+   ++NV      
Sbjct: 205 TEKYDYILNVIKHKSPFPSFTEARSMLLMEESRLSNK-SKSSLSHTNHPSLSNVLFTVPR 264

Query: 266 PDPRLTNPPYQNSSRSFNGQRGGQNFSNNRGRGRGRGN 302
              R     + N+S    G+   +N       GR   N
Sbjct: 265 QQERYPQEYHNNNSNMGRGRSKKKNRGGGSSDGRYNNN 264

[Close]

BLAST of PI0024135.1 vs. TAIR 10
Match: AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 2.1e-05
Identity = 69/254 (27.17%), Postives = 104/254 (40.94%), Query Frame = 0


Query: 99  NPDFEKWITTDLLLLGWLYNSMNP-EVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLR 158
           N +   W   D ++   LY ++ P +     +  + ++D+W  I++ F     A    L 
Sbjct: 59  NANDVNWQKRDGIVKLSLYGTLTPKQFQGSFVTSSTSRDIWLRIKNQFRNNKDARALRLD 118

Query: 159 QMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIRSLVSQALLGLDETYNPVIAVIQG 218
              +T   G M++ DY R MK  ADSL      V+ R+LV   L GL+  ++ +I VI+ 
Sbjct: 119 SELRTKDIGDMRVADYYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLNPKFDNIINVIKH 178

Query: 219 KPDISWLDMQSELLIFE----KRLEHQNSQRNIGSTSGNIMANVAQNRGTPDPRLTNPPY 278
           +      D  + +L  E    KR    N      S+S  ++A               PP 
Sbjct: 179 RQPFPSFDDAATMLQEEEDRLKRAIKPNPTHVDHSSSSTVLACSEA-----------PPV 238

Query: 279 QNSSRSFNGQRG--GQNFSNNRGRGRGRG----NKPTCQICNK---YGHSAAACYNRFNK 338
            N  RS   Q G  G+   NN  RGRG      N PT    N+   Y +S    Y  +N 
Sbjct: 239 TNFQRSGGNQMGYRGRGRGNNIFRGRGGRFSYYNMPTFNSWNRPPFYQNS----YQMWNH 297

The following BLAST results are available for this feature:

BLAST of PI0024135.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0024135.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SIT7	4.8e-98	56.12	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S4E1U6	8.7e-84	51.19	uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4E1V2	8.7e-84	51.19	uncharacterized protein LOC107991581 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3C373	1.8e-68	58.56	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A1S4E1U9	1.1e-67	49.41	uncharacterized protein LOC107991581 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of PI0024135.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0026100.1	9.8e-98	56.12	uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]	[more]
XP_016902203.1	1.8e-83	51.19	PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]	[more]
XP_016902197.1	1.8e-83	51.19	PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]	[more]
TYK05754.1	3.6e-68	58.56	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
XP_016902205.1	2.4e-67	49.41	PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo]	[more]

BLAST of PI0024135.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48050.1	1.2e-08	22.66	CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE...	[more]
AT1G34070.1	2.1e-05	27.17	CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 105..238 e-value: 8.2E-12 score: 45.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..301
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 329..349
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..297
None	No IPR available	PANTHER	PTHR34222:SF48	SUBFAMILY NOT NAMED	coord: 39..357
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 39..357

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0024135	PI0024135	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0024135.1-exon	PI0024135.1-exon-chr03:24837842..24838951	exon
PI0024135.1-exon	PI0024135.1-exon-chr03:24843647..24843826	exon
PI0024135.1-exon	PI0024135.1-exon-chr03:24846165..24846209	exon
PI0024135.1-exon	PI0024135.1-exon-chr03:24846512..24846523	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0024135.1-cds	PI0024135.1-cds-chr03:24837842..24838951	CDS
PI0024135.1-cds	PI0024135.1-cds-chr03:24843647..24843826	CDS
PI0024135.1-cds	PI0024135.1-cds-chr03:24846165..24846209	CDS
PI0024135.1-cds	PI0024135.1-cds-chr03:24846512..24846523	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0024135.1	PI0024135.1-protein	polypeptide