PI0023809.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0023809.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	kinetochore protein SPC24 homolog
Location	chr08: 14878131 .. 14881495 (-)
Sequence length	2164
RNA-Seq Expression	PI0023809.1
Synteny	PI0023809.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTCGAAGCCCTAAGAACAAATATCGGCACGAAGTATAAGTCCTCACACCAACCTCCTTGTTCATATCTTCTTCAATTAAGCAAAATGGGAGATTTCGCCAGAAATTCCAACATTGAGGAGCTCACATCTTTTGCCGACGATCTGGTAGCAATCTTAAAGGACCCAACTGACCTTCATAACTTGAATCAATGTCTCCAACATTTCAAGACTCTTCAATCTTCTTGTGACGATGATTTCACTAGTGTTCAAAGTTCAGTTGAAGGTATTTTGTCTTCCTTTCTCTAATATGGGTTTTATTTATAAATTATTTTGGGGTTAGAAATTTCGGGTCTTTTGGGGGTGAGCGAATTCATATAATTTATTTAAAGACTTATTAAACGAAGCAGATTATGAGAAGAAAATTAAAGCATGCCGGGAGAAAACAGAAGAGGCCAAAGCGAACACTGTTGCAGATGATGAAATGGAGATTCTAGAAAAGGAACTCGAAGAGGAGGTTGGGAAAGGGCATTTGCTCATGGAGGAGATAAGATAAGTGTAGAATTAACTTTAATTTTGAATTTTTCTTCACATGTTTGTTTTTTCCTAATGTATTTGTGTATGTATATGATGCACCTGGTTTTTTCAACACATTGGTCACCAATGAGATTAATGAACTAGAACACCAAAGGGTTTCTGTTCAAGAAAGGAAGCAAGCGATGAAGAAACTTGAGCAACAAGAACTTTGGGCTCAGTGAGTATATTTTCTGTTTTGAAGTTGCTTTGTCATCAATGTTAATTCTGTAGCAATTATGTAATTTCTGTGAATTTTGAATTTATTTCAAAATTTTGCTGTTTCTAGTATTATCTGATAAACATAATTTTTTATGTATTGTTAGTTAGAACTTGGAAGTTCAAAAGGTGTAAAGTATATAAGTTACAGGTTATTGGCACCATTGTTTCTCCTATCGATTGCTTATGGTTAGAAAGGTTAACTAGGTAGACATTCCTCTGAAGATGGCTGCTTAATTTTTGAACTAATGAACGTTTTGTAGGCTAATAGTTGATCCATGATATGATAATAGTAACCTCTTTGTATGGAATCTCTGTCCTATGTTGAAAATAGGAAATTTTTTAAGGTATTTGAAGTTTGTAAAAGATAAGAGCGAGAAGAAACAAAGGTAACAATGATCAGTAAACAACACTACTAAGTACAAAAAGTTGTCAAATTCATTATTTATTAATGAGGTGAACTAGACTTACATCGAGTGTTAGGAATACAAACAACGCGTCGCATTGACTAGAAAAGAGAGTAATTTATGGTTCCATTGATATGAAATTTTTTTGGATAAAACCAAAAGCAAAGCCGCAAAGGCTTATGCCAAAGGTAGACGATAATACACCGTTGCTGAGATGTGGCAGATCCATTGCCCTTCACGTCTGGAACTGTAGTGCATTCCAGAACTGAATTTATGGTAGTTGTAATTATCGTATTTGCTTTAACTGTGAACATTTTTTGAACTGGGTGGCTGTCAAAGATCCCTTGACAACTCAAAGTCTCAGTAACTATTGGTAGGCATTAATTTGACATTTCTTATCTTCTAAATTGATGCCTATTTTCTATTTTTCTGGCAGGAGGAAGCTTTCAATGTATGCTTCGGTCACTGATATAATACCAAACATGGACGATCACTCTAAAATTTCTGGTCGTATCCTTCGTTTGAGTTTATATTCTTTTCTGTTATATTTTCTTTTTCCCTATTGCAATTAGCCAATTACTTTACCTTAACGTAAACTAACTACAGATATTGTGGACAGAAATAAACGAGTTGTCCAAAAGTTTGAATTCGACCCAACTAAGATATCTTCTTTTGATACATGCAATGGCCTTTGGAATATGATTAATTCCCCATAGTACAGATATCAATTACATTGTGATTTGTGAATTAGAAGCTTATTATAGCTTGGTCCTTTTAGTCACTTCATGGTAATACAATAGAACACTTATTTTGTTGTATATGTATGTTTGAAGGACTACTTTCTAAGGTCCTCTTGTATGTGATAACTTATTGCAAATCAAATCTCCTTGGTCCTTGATGATTATTGAAGAAAAGAATCCCCGTCTATGTTAAGGCACCAAGCCATGAAAATGGTGAATGATGTTGCTCATTTCCATGATGCTTGGAAGCAACTAACTTTGTATCTGTTCCACTGATCTCATGGAAGTTTAAATTCTACGATCTTTTGTAGTCTAATTATATTAGTCGTTGAAAATGATTTTTTCCTTTCTTTGTAGTTGAGGTTGAGTCTACTGTTTTAGCTCATGTGTTAGTTTGTTACTTTTCTGTTATTAACTTTAATCTTTCTCATTGTATATGTATACTTCCTTGGAGATGAGTTAAGTTTCGGTATTATTTCCTCCACTTTACGTCTGTTCATTGCTATGGATCGTACAATGAAAATTTATGACCATGGGATGTTTATGTCAATTGTGATGTAATTGTGAAGACAATATTCTATGATAATAGTACTTATGTTAGAACACGCAGCAATTAGTTACAAGCCACCCAAAAGCAAGAAGGACAAGAGCTAGCCACCATCTTTCATTCATGATATTAGATTTAAGCTCCATAAGCTTCATAAAATAGAGTTCACAATATCAGGTTTTACTCTTCCCCTCGTTCTTTTTTTGGTTGACGGAGAGATACTGACAATTTTAAAATTATCTACTGTCTGAGAGAAGGCAACATTACACAATCAGCACATGAACCTAAATAGTTATCGTAATTCTGAAACTGAAATAGTTATATTCTATAGTTATCTTCTAGTATTGTTATTTCAAAGGACAAACTTCTCCATTGACAGTAGTATCTAATTTTCTGGCTGGTTTGATCTTGAGATCTCTCCTTGCCCGTGTTTATAATGTTGAGTTTCTCGTCGTAGTTGCATAACAGACTTGACTTCCTGCGCTGGCATTTTCCAGGTATTGGCGGTTGTTGAGGTTTATAGACTTGCAAGCTTCTGGTACAGCACTGCCTTTATAAGCTTTGCAAATGTAGGCCATGAAATTTGGTAGTCCTGATTCAGACAAAAGAAAGCAGATTGATTTCAAAGAATCACAAAGCAAAGAACAAGGATAAAACTAGCTCGAATCAAAGCTGACCAACCTCCTGCAGAGGGTGATTATCGACAATGACCCATGGAACAAATCGGTGAGGCGGATTGAGGCGAGTAGTTTCAGAAGCATAGTATTGTTCGAGCTGCATTTCATTGGCTTACTCAGGATTCAACCAAGGAAGAAACAGAAATAGAGGATGTTAAGTAAGCAATGCTACCATTTTTCCATGCCCATTTCTGTAGCAATCTATTGGTATGGCACTCAACTTT

mRNA sequence

GTTTCGAAGCCCTAAGAACAAATATCGGCACGAAGTATAAGTCCTCACACCAACCTCCTTGTTCATATCTTCTTCAATTAAGCAAAATGGGAGATTTCGCCAGAAATTCCAACATTGAGGAGCTCACATCTTTTGCCGACGATCTGGTAGCAATCTTAAAGGACCCAACTGACCTTCATAACTTGAATCAATGTCTCCAACATTTCAAGACTCTTCAATCTTCTTGTGACGATGATTTCACTAGTGTTCAAAGTTCAGTTGAAGATTATGAGAAGAAAATTAAAGCATGCCGGGAGAAAACAGAAGAGGCCAAAGCGAACACTGTTGCAGATGATGAAATGGAGATTCTAGAAAAGGAACTCGAAGAGGAGGTTGGGAAAGGGCATTTGCTCATGGAGGAGATAAGATTGGTCACCAATGAGATTAATGAACTAGAACACCAAAGGGTTTCTGTTCAAGAAAGGAAGCAAGCGATGAAGAAACTTGAGCAACAAGAACTTTGGGCTCAGAGGAAGCTTTCAATGTATGCTTCGGTCACTGATATAATACCAAACATGGACGATCACTCTAAAATTTCTGGTCATATTGTGGACAGAAATAAACGAGTTGTCCAAAAGTTTGAATTCGACCCAACTAAGATATCTTCTTTTGATACATGCAATGGCCTTTGGAATATGATTAATTCCCCATAGTACAGATATCAATTACATTGTGATTTGTGAATTAGAAGCTTATTATAGCTTGGTCCTTTTAGTCACTTCATGGTAATACAATAGAACACTTATTTTGTTGTATATGTATGTTTGAAGGACTACTTTCTAAGGTCCTCTTGTATGTGATAACTTATTGCAAATCAAATCTCCTTGGTCCTTGATGATTATTGAAGAAAAGAATCCCCGTCTATGTTAAGGCACCAAGCCATGAAAATGGTGAATGATGTTGCTCATTTCCATGATGCTTGGAAGCAACTAACTTTGTATCTGTTCCACTGATCTCATGGAAGTTTAAATTCTACGATCTTTTGTAGTCTAATTATATTAGTCGTTGAAAATGATTTTTTCCTTTCTTTGTAGTTGAGGTTGAGTCTACTGTTTTAGCTCATGTGTTAGTTTGTTACTTTTCTGTTATTAACTTTAATCTTTCTCATTGTATATGTATACTTCCTTGGAGATGAGTTAAGTTTCGGTATTATTTCCTCCACTTTACGTCTGTTCATTGCTATGGATCGTACAATGAAAATTTATGACCATGGGATGTTTATGTCAATTGTGATGTAATTGTGAAGACAATATTCTATGATAATAGTACTTATGTTAGAACACGCAGCAATTAGTTACAAGCCACCCAAAAGCAAGAAGGACAAGAGCTAGCCACCATCTTTCATTCATGATATTAGATTTAAGCTCCATAAGCTTCATAAAATAGAGTTCACAATATCAGGTTTTACTCTTCCCCTCGTTCTTTTTTTGGTTGACGGAGAGATACTGACAATTTTAAAATTATCTACTGTCTGAGAGAAGGCAACATTACACAATCAGCACATGAACCTAAATAGTTATCGTAATTCTGAAACTGAAATAGTTATATTCTATAGTTATCTTCTAGTATTGTTATTTCAAAGGACAAACTTCTCCATTGACAGTAGTATCTAATTTTCTGGCTGGTTTGATCTTGAGATCTCTCCTTGCCCGTGTTTATAATGTTGAGTTTCTCGTCGTAGTTGCATAACAGACTTGACTTCCTGCGCTGGCATTTTCCAGGTATTGGCGGTTGTTGAGGTTTATAGACTTGCAAGCTTCTGGTACAGCACTGCCTTTATAAGCTTTGCAAATGTAGGCCATGAAATTTGGTAGTCCTGATTCAGACAAAAGAAAGCAGATTGATTTCAAAGAATCACAAAGCAAAGAACAAGGATAAAACTAGCTCGAATCAAAGCTGACCAACCTCCTGCAGAGGGTGATTATCGACAATGACCCATGGAACAAATCGGTGAGGCGGATTGAGGCGAGTAGTTTCAGAAGCATAGTATTGTTCGAGCTGCATTTCATTGGCTTACTCAGGATTCAACCAAGGAAGAAACAGAAATAGAGGATGTTAAGTAAGCAATGCTACCATTTTTCCATGCCCATTTCTGTAGCAATCTATTGGTATGGCACTCAACTTT

Coding sequence (CDS)

ATGGGAGATTTCGCCAGAAATTCCAACATTGAGGAGCTCACATCTTTTGCCGACGATCTGGTAGCAATCTTAAAGGACCCAACTGACCTTCATAACTTGAATCAATGTCTCCAACATTTCAAGACTCTTCAATCTTCTTGTGACGATGATTTCACTAGTGTTCAAAGTTCAGTTGAAGATTATGAGAAGAAAATTAAAGCATGCCGGGAGAAAACAGAAGAGGCCAAAGCGAACACTGTTGCAGATGATGAAATGGAGATTCTAGAAAAGGAACTCGAAGAGGAGGTTGGGAAAGGGCATTTGCTCATGGAGGAGATAAGATTGGTCACCAATGAGATTAATGAACTAGAACACCAAAGGGTTTCTGTTCAAGAAAGGAAGCAAGCGATGAAGAAACTTGAGCAACAAGAACTTTGGGCTCAGAGGAAGCTTTCAATGTATGCTTCGGTCACTGATATAATACCAAACATGGACGATCACTCTAAAATTTCTGGTCATATTGTGGACAGAAATAAACGAGTTGTCCAAAAGTTTGAATTCGACCCAACTAAGATATCTTCTTTTGATACATGCAATGGCCTTTGGAATATGATTAATTCCCCATAG

Protein sequence

MGDFARNSNIEELTSFADDLVAILKDPTDLHNLNQCLQHFKTLQSSCDDDFTSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGHLLMEEIRLVTNEINELEHQRVSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFEFDPTKISSFDTCNGLWNMINSP

Homology

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BLAST of PI0023809.1 vs. ExPASy Swiss-Prot
Match: Q67XT3 (Kinetochore protein SPC24 homolog OS=Arabidopsis thaliana OX=3702 GN=SPC24 PE=1 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 5.9e-45
Identity = 88/199 (44.22%), Postives = 145/199 (72.86%), Query Frame = 0


Query: 1   MGDFARNSNIEELTSFADDLVAILKDPTDLHNLNQCLQHFKTLQSSCDDDFTSVQSSVED 60
           MG+ + N +IE+L S+ DDL+ +L        ++Q  + FK L  +C +DF  +Q S+ED
Sbjct: 1   MGNASENFDIEDLMSYGDDLINLLNVKNGFDIISQSSEQFKALNFACHEDFNQIQGSIED 60

Query: 61  YEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGHLLMEEIRLVTNEINELEHQR 120
            + K+ AC++KTEEA ++  A+DE+E L+KEL+EE+ +   L +E+RLV +E+ +L  Q 
Sbjct: 61  CKTKLYACKKKTEEAYSDIAAEDEIERLQKELDEEMEREFKLKDELRLVADELKDLNAQL 120

Query: 121 VSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFEF 180
            S+ E KQ+ K+  + +L A++KLSMYASVT++IP++DD SKISG++VDR KR+++KF+F
Sbjct: 121 SSIDEHKQSTKRKVRDDLRAEKKLSMYASVTNVIPDIDDPSKISGYMVDREKRLIEKFQF 180

Query: 181 DPTKISSFDTCNGLWNMIN 200
           +  K+++++TCN +W++IN
Sbjct: 181 ETNKMTAYETCNSIWSIIN 199

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BLAST of PI0023809.1 vs. ExPASy TrEMBL
Match: A0A1S3CKZ4 (uncharacterized protein LOC103502153 OS=Cucumis melo OX=3656 GN=LOC103502153 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.2e-101
Identity = 194/201 (96.52%), Postives = 196/201 (97.51%), Query Frame = 0


Query: 1   MGDFARNSNIEELTSFADDLVAILKDPTDLHNLNQCLQHFKTLQSSCDDDFTSVQSSVED 60
           MGDFA NSNIEEL SFADDLVAILKDPTD+HNLNQCL+HFKTLQSSCDDDF SVQSSVED
Sbjct: 1   MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVED 60

Query: 61  YEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGHLLMEEIRLVTNEINELEHQR 120
           YEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGHLLMEEIRLVTNEINELE QR
Sbjct: 61  YEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGHLLMEEIRLVTNEINELERQR 120

Query: 121 VSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFEF 180
           VSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMDD SKISGHIVDRNKRVVQKFEF
Sbjct: 121 VSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFEF 180

Query: 181 DPTKISSFDTCNGLWNMINSP 202
           DPTKISSFDTCNGLWNMINSP
Sbjct: 181 DPTKISSFDTCNGLWNMINSP 201

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BLAST of PI0023809.1 vs. ExPASy TrEMBL
Match: A0A6J1IPN8 (uncharacterized protein LOC111478320 OS=Cucurbita maxima OX=3661 GN=LOC111478320 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 9.6e-83
Identity = 159/201 (79.10%), Postives = 182/201 (90.55%), Query Frame = 0


Query: 1   MGDFARNSNIEELTSFADDLVAILKDPTDLHNLNQCLQHFKTLQSSCDDDFTSVQSSVED 60
           M DFA   NIEE+ S+ DDLVA+L D  D+  LNQCL+HFKTLQSSC DDF++VQSSV+D
Sbjct: 1   MADFAGKFNIEEILSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQD 60

Query: 61  YEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGHLLMEEIRLVTNEINELEHQR 120
           YEKKI+ACR+KTEEAKA+TVADDE++ILEKEL EE+GKG+LLMEEIR++T+EIN+L+ QR
Sbjct: 61  YEKKIEACRQKTEEAKASTVADDEIDILEKELGEELGKGNLLMEEIRIITSEINDLDRQR 120

Query: 121 VSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFEF 180
           +SVQERKQAMKKLEQQEL  QRKLSMYASVTDIIPNMDD SKISGHIVDRNKRVVQ+FEF
Sbjct: 121 ISVQERKQAMKKLEQQELRTQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQEFEF 180

Query: 181 DPTKISSFDTCNGLWNMINSP 202
           DPT ISSFD CNG+WNMINSP
Sbjct: 181 DPTNISSFDICNGIWNMINSP 201

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BLAST of PI0023809.1 vs. ExPASy TrEMBL
Match: A0A6J1GFS1 (uncharacterized protein LOC111453528 OS=Cucurbita moschata OX=3662 GN=LOC111453528 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 8.2e-82
Identity = 157/201 (78.11%), Postives = 181/201 (90.05%), Query Frame = 0


Query: 1   MGDFARNSNIEELTSFADDLVAILKDPTDLHNLNQCLQHFKTLQSSCDDDFTSVQSSVED 60
           M DFA   NIEEL S+ DDLVA+L D  D+  LNQCL+HFKTLQSSC DDF++VQSSV+D
Sbjct: 1   MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQD 60

Query: 61  YEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGHLLMEEIRLVTNEINELEHQR 120
           YEKKI+ACR+KTEEA+ +TV+DDE++ILEKEL EE+GKG+LLMEEIR++T+EIN+L+ QR
Sbjct: 61  YEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGNLLMEEIRIITSEINDLDRQR 120

Query: 121 VSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFEF 180
           +SVQERKQAMKKLEQQEL  QRKLSMYASVTDIIPNMDD SKISGHIVDRNKRVVQ+FEF
Sbjct: 121 ISVQERKQAMKKLEQQELRTQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQEFEF 180

Query: 181 DPTKISSFDTCNGLWNMINSP 202
           DPT ISSFD CNG+WNMINSP
Sbjct: 181 DPTNISSFDICNGIWNMINSP 201

[Close]

BLAST of PI0023809.1 vs. ExPASy TrEMBL
Match: A0A6J1CR83 (uncharacterized protein LOC111013852 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013852 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.8e-79
Identity = 156/201 (77.61%), Postives = 177/201 (88.06%), Query Frame = 0


Query: 1   MGDFARNSNIEELTSFADDLVAILKDPTDLHNLNQCLQHFKTLQSSCDDDFTSVQSSVED 60
           MGDF+   NIEEL S+ +DLVA+LKD  D+  LNQCL+H K LQS CDDDF++V SSV+D
Sbjct: 1   MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQD 60

Query: 61  YEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGHLLMEEIRLVTNEINELEHQR 120
           YEKKI+ACR+KTEEAKA TVAD EM++LE+ELEEE+ K HLLMEEIRLVT+EINEL+ QR
Sbjct: 61  YEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEHLLMEEIRLVTSEINELDCQR 120

Query: 121 VSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFEF 180
           +SVQERKQAMKKLEQQEL AQRKLSMYASVTDIIPNMDD SKISGHIVDRNKRVVQKFE 
Sbjct: 121 ISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFEL 180

Query: 181 DPTKISSFDTCNGLWNMINSP 202
           DPTK S+FD CN +W+MINSP
Sbjct: 181 DPTKTSAFDICNSIWDMINSP 201

[Close]

BLAST of PI0023809.1 vs. ExPASy TrEMBL
Match: A0A6J1F034 (uncharacterized protein LOC111438184 OS=Cucurbita moschata OX=3662 GN=LOC111438184 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 6.5e-79
Identity = 156/201 (77.61%), Postives = 174/201 (86.57%), Query Frame = 0


Query: 1   MGDFARNSNIEELTSFADDLVAILKDPTDLHNLNQCLQHFKTLQSSCDDDFTSVQSSVED 60
           MGDF+   NIE+L S+ DDLVA+LKD  D+  LNQCLQHF  LQSS  DD  +V SSV+D
Sbjct: 1   MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQD 60

Query: 61  YEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGHLLMEEIRLVTNEINELEHQR 120
           YEKKI+ CR KTEEAKA TVADDEM+ILEKE+EEEV + HLLMEEIRLV+N+INEL+ QR
Sbjct: 61  YEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEHLLMEEIRLVSNQINELDRQR 120

Query: 121 VSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFEF 180
           +SVQE+KQA KKLEQQEL AQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFE 
Sbjct: 121 ISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFEL 180

Query: 181 DPTKISSFDTCNGLWNMINSP 202
           DPTK+SSFD CN +WNMINSP
Sbjct: 181 DPTKMSSFDICNDIWNMINSP 201

[Close]

BLAST of PI0023809.1 vs. NCBI nr
Match: XP_008464222.1 (PREDICTED: uncharacterized protein LOC103502153 [Cucumis melo])

HSP 1 Score: 379.0 bits (972), Expect = 2.5e-101
Identity = 194/201 (96.52%), Postives = 196/201 (97.51%), Query Frame = 0


Query: 1   MGDFARNSNIEELTSFADDLVAILKDPTDLHNLNQCLQHFKTLQSSCDDDFTSVQSSVED 60
           MGDFA NSNIEEL SFADDLVAILKDPTD+HNLNQCL+HFKTLQSSCDDDF SVQSSVED
Sbjct: 1   MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVED 60

Query: 61  YEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGHLLMEEIRLVTNEINELEHQR 120
           YEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGHLLMEEIRLVTNEINELE QR
Sbjct: 61  YEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGHLLMEEIRLVTNEINELERQR 120

Query: 121 VSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFEF 180
           VSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMDD SKISGHIVDRNKRVVQKFEF
Sbjct: 121 VSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFEF 180

Query: 181 DPTKISSFDTCNGLWNMINSP 202
           DPTKISSFDTCNGLWNMINSP
Sbjct: 181 DPTKISSFDTCNGLWNMINSP 201

[Close]

BLAST of PI0023809.1 vs. NCBI nr
Match: XP_004148609.1 (kinetochore protein SPC24 homolog [Cucumis sativus] >KAE8649568.1 hypothetical protein Csa_017916 [Cucumis sativus])

HSP 1 Score: 370.2 bits (949), Expect = 1.2e-98
Identity = 189/201 (94.03%), Postives = 195/201 (97.01%), Query Frame = 0


Query: 1   MGDFARNSNIEELTSFADDLVAILKDPTDLHNLNQCLQHFKTLQSSCDDDFTSVQSSVED 60
           MGDFA NSNIEEL SFADDLVAILKDPTD+ NLNQCL+HFKTLQSSCDDDFTSVQSS+ED
Sbjct: 1   MGDFATNSNIEELASFADDLVAILKDPTDVRNLNQCLEHFKTLQSSCDDDFTSVQSSLED 60

Query: 61  YEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGHLLMEEIRLVTNEINELEHQR 120
           YEKKIKACREKTEEAKANTVADDEMEILEKELEEE+GKGHLLMEEIRLVTNEINELE +R
Sbjct: 61  YEKKIKACREKTEEAKANTVADDEMEILEKELEEEIGKGHLLMEEIRLVTNEINELECRR 120

Query: 121 VSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFEF 180
           VSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNM+D SKISGHIVDRNKRVVQKFEF
Sbjct: 121 VSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMEDQSKISGHIVDRNKRVVQKFEF 180

Query: 181 DPTKISSFDTCNGLWNMINSP 202
           DP KISSFDTCNGLWNMINSP
Sbjct: 181 DPAKISSFDTCNGLWNMINSP 201

[Close]

BLAST of PI0023809.1 vs. NCBI nr
Match: XP_038883770.1 (kinetochore protein SPC24 homolog [Benincasa hispida])

HSP 1 Score: 338.6 bits (867), Expect = 3.7e-89
Identity = 170/201 (84.58%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 1   MGDFARNSNIEELTSFADDLVAILKDPTDLHNLNQCLQHFKTLQSSCDDDFTSVQSSVED 60
           MGDF   SNIE   SFADDLVA+LKDP D+ +LNQCL+HFK LQSSCDDDF+SVQS V+D
Sbjct: 1   MGDFVSESNIEAFISFADDLVALLKDPFDVQDLNQCLEHFKALQSSCDDDFSSVQSLVQD 60

Query: 61  YEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGHLLMEEIRLVTNEINELEHQR 120
           YEKKIKAC++KTEEAKANTV DDEM ILEKEL+EEVGKGHLLMEEIRLVTNEINELE QR
Sbjct: 61  YEKKIKACQQKTEEAKANTVTDDEMVILEKELDEEVGKGHLLMEEIRLVTNEINELERQR 120

Query: 121 VSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFEF 180
           +S+QERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMDD SKISGHIVDR+KR+VQ+FEF
Sbjct: 121 ISIQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMDDQSKISGHIVDRDKRIVQEFEF 180

Query: 181 DPTKISSFDTCNGLWNMINSP 202
           D TKISSFD CNG+WNMINSP
Sbjct: 181 DSTKISSFDICNGIWNMINSP 201

[Close]

BLAST of PI0023809.1 vs. NCBI nr
Match: XP_022978290.1 (uncharacterized protein LOC111478320 [Cucurbita maxima])

HSP 1 Score: 316.2 bits (809), Expect = 2.0e-82
Identity = 159/201 (79.10%), Postives = 182/201 (90.55%), Query Frame = 0


Query: 1   MGDFARNSNIEELTSFADDLVAILKDPTDLHNLNQCLQHFKTLQSSCDDDFTSVQSSVED 60
           M DFA   NIEE+ S+ DDLVA+L D  D+  LNQCL+HFKTLQSSC DDF++VQSSV+D
Sbjct: 1   MADFAGKFNIEEILSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQD 60

Query: 61  YEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGHLLMEEIRLVTNEINELEHQR 120
           YEKKI+ACR+KTEEAKA+TVADDE++ILEKEL EE+GKG+LLMEEIR++T+EIN+L+ QR
Sbjct: 61  YEKKIEACRQKTEEAKASTVADDEIDILEKELGEELGKGNLLMEEIRIITSEINDLDRQR 120

Query: 121 VSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFEF 180
           +SVQERKQAMKKLEQQEL  QRKLSMYASVTDIIPNMDD SKISGHIVDRNKRVVQ+FEF
Sbjct: 121 ISVQERKQAMKKLEQQELRTQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQEFEF 180

Query: 181 DPTKISSFDTCNGLWNMINSP 202
           DPT ISSFD CNG+WNMINSP
Sbjct: 181 DPTNISSFDICNGIWNMINSP 201

[Close]

BLAST of PI0023809.1 vs. NCBI nr
Match: XP_022950424.1 (uncharacterized protein LOC111453528 [Cucurbita moschata])

HSP 1 Score: 313.2 bits (801), Expect = 1.7e-81
Identity = 157/201 (78.11%), Postives = 181/201 (90.05%), Query Frame = 0


Query: 1   MGDFARNSNIEELTSFADDLVAILKDPTDLHNLNQCLQHFKTLQSSCDDDFTSVQSSVED 60
           M DFA   NIEEL S+ DDLVA+L D  D+  LNQCL+HFKTLQSSC DDF++VQSSV+D
Sbjct: 1   MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQD 60

Query: 61  YEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGHLLMEEIRLVTNEINELEHQR 120
           YEKKI+ACR+KTEEA+ +TV+DDE++ILEKEL EE+GKG+LLMEEIR++T+EIN+L+ QR
Sbjct: 61  YEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGNLLMEEIRIITSEINDLDRQR 120

Query: 121 VSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFEF 180
           +SVQERKQAMKKLEQQEL  QRKLSMYASVTDIIPNMDD SKISGHIVDRNKRVVQ+FEF
Sbjct: 121 ISVQERKQAMKKLEQQELRTQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQEFEF 180

Query: 181 DPTKISSFDTCNGLWNMINSP 202
           DPT ISSFD CNG+WNMINSP
Sbjct: 181 DPTNISSFDICNGIWNMINSP 201

[Close]

BLAST of PI0023809.1 vs. TAIR 10
Match: AT3G08880.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01570.1); Has 177 Blast hits to 175 proteins in 60 species: Archae - 4; Bacteria - 33; Metazoa - 18; Fungi - 11; Plants - 59; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). )

HSP 1 Score: 182.2 bits (461), Expect = 4.2e-46
Identity = 88/199 (44.22%), Postives = 145/199 (72.86%), Query Frame = 0


Query: 1   MGDFARNSNIEELTSFADDLVAILKDPTDLHNLNQCLQHFKTLQSSCDDDFTSVQSSVED 60
           MG+ + N +IE+L S+ DDL+ +L        ++Q  + FK L  +C +DF  +Q S+ED
Sbjct: 1   MGNASENFDIEDLMSYGDDLINLLNVKNGFDIISQSSEQFKALNFACHEDFNQIQGSIED 60

Query: 61  YEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGHLLMEEIRLVTNEINELEHQR 120
            + K+ AC++KTEEA ++  A+DE+E L+KEL+EE+ +   L +E+RLV +E+ +L  Q 
Sbjct: 61  CKTKLYACKKKTEEAYSDIAAEDEIERLQKELDEEMEREFKLKDELRLVADELKDLNAQL 120

Query: 121 VSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFEF 180
            S+ E KQ+ K+  + +L A++KLSMYASVT++IP++DD SKISG++VDR KR+++KF+F
Sbjct: 121 SSIDEHKQSTKRKVRDDLRAEKKLSMYASVTNVIPDIDDPSKISGYMVDREKRLIEKFQF 180

Query: 181 DPTKISSFDTCNGLWNMIN 200
           +  K+++++TCN +W++IN
Sbjct: 181 ETNKMTAYETCNSIWSIIN 199

[Close]

BLAST of PI0023809.1 vs. TAIR 10
Match: AT5G01570.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G08880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 125.2 bits (313), Expect = 6.1e-29
Identity = 71/188 (37.77%), Postives = 115/188 (61.17%), Query Frame = 0


Query: 6   RNSNIEELTSFADDLVAILKDPTDLHNLNQCLQHFKTLQSSCDDDFTSVQSSVEDYEKKI 65
           ++ N E + S+ D+L+ +L D      L Q L+  + +  SCD+DF  +  S++D +KK+
Sbjct: 4   QSRNFEMVISWGDELIHVLDDRKGFDVLVQTLEQLRAIPFSCDEDFKEIHESLQDLQKKL 63

Query: 66  KACREKTEEAKANTVADDEMEILEKELEEEVGKGHLLMEEIRLVTNEINELEHQRVSVQE 125
             C+EKT+EA +    ++E+E L+KEL+EE+     L EE+R                +E
Sbjct: 64  DVCKEKTDEANSEIADEEEIERLQKELDEELELECKLKEELR-----------YEALFEE 123

Query: 126 RKQAMKKLEQQELWAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFEFDPTKI 185
            + A+K+ ++ +L  + KL MYASVT +IPN+DD  K SG++V R+KR++ KFEFD  K 
Sbjct: 124 HRLAIKRNKRDQLRTETKLPMYASVTRVIPNIDDSLKTSGYMVGRDKRLMDKFEFDSNKS 180

Query: 186 SS-FDTCN 193
           +S ++TCN
Sbjct: 184 TSVYETCN 180

The following BLAST results are available for this feature:

BLAST of PI0023809.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67XT3	5.9e-45	44.22	Kinetochore protein SPC24 homolog OS=Arabidopsis thaliana OX=3702 GN=SPC24 PE=1 ...	[more]

BLAST of PI0023809.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CKZ4	1.2e-101	96.52	uncharacterized protein LOC103502153 OS=Cucumis melo OX=3656 GN=LOC103502153 PE=...	[more]
A0A6J1IPN8	9.6e-83	79.10	uncharacterized protein LOC111478320 OS=Cucurbita maxima OX=3661 GN=LOC111478320...	[more]
A0A6J1GFS1	8.2e-82	78.11	uncharacterized protein LOC111453528 OS=Cucurbita moschata OX=3662 GN=LOC1114535...	[more]
A0A6J1CR83	3.8e-79	77.61	uncharacterized protein LOC111013852 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1F034	6.5e-79	77.61	uncharacterized protein LOC111438184 OS=Cucurbita moschata OX=3662 GN=LOC1114381...	[more]

BLAST of PI0023809.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464222.1	2.5e-101	96.52	PREDICTED: uncharacterized protein LOC103502153 [Cucumis melo]	[more]
XP_004148609.1	1.2e-98	94.03	kinetochore protein SPC24 homolog [Cucumis sativus] >KAE8649568.1 hypothetical p...	[more]
XP_038883770.1	3.7e-89	84.58	kinetochore protein SPC24 homolog [Benincasa hispida]	[more]
XP_022978290.1	2.0e-82	79.10	uncharacterized protein LOC111478320 [Cucurbita maxima]	[more]
XP_022950424.1	1.7e-81	78.11	uncharacterized protein LOC111453528 [Cucurbita moschata]	[more]

BLAST of PI0023809.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08880.1	4.2e-46	44.22	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G01570.1	6.1e-29	37.77	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 106..136
None	No IPR available	COILS	Coil	Coil	coord: 58..98
None	No IPR available	GENE3D	3.30.160.570	Ncd80 complex, Spc24 subunit	coord: 139..200 e-value: 5.1E-10 score: 41.0
IPR044951	Kinetochore protein SPC24-like	PANTHER	PTHR35730	KINETOCHORE PROTEIN SPC24 HOMOLOG-RELATED	coord: 1..197

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0023809	PI0023809	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0023809.1-exon	PI0023809.1-exon-chr08:14878131..14879712	exon
PI0023809.1-exon	PI0023809.1-exon-chr08:14879809..14879882	exon
PI0023809.1-exon	PI0023809.1-exon-chr08:14880764..14880865	exon
PI0023809.1-exon	PI0023809.1-exon-chr08:14880966..14881107	exon
PI0023809.1-exon	PI0023809.1-exon-chr08:14881232..14881495	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0023809.1-three_prime_utr	PI0023809.1-three_prime_utr-chr08:14878131..14879602	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0023809.1-cds	PI0023809.1-cds-chr08:14879603..14879712	CDS
PI0023809.1-cds	PI0023809.1-cds-chr08:14879809..14879882	CDS
PI0023809.1-cds	PI0023809.1-cds-chr08:14880764..14880865	CDS
PI0023809.1-cds	PI0023809.1-cds-chr08:14880966..14881107	CDS
PI0023809.1-cds	PI0023809.1-cds-chr08:14881232..14881409	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0023809.1-five_prime_utr	PI0023809.1-five_prime_utr-chr08:14881410..14881495	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0023809.1	PI0023809.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051983	regulation of chromosome segregation