PI0023559.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0023559.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	TMV resistance protein N-like
Location	chr09: 21236123 .. 21237098 (-)
Sequence length	633
RNA-Seq Expression	PI0023559.1
Synteny	PI0023559.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGAGTACAATGTGAAGTTACTTTCTCAAGGAAATGCCAACTTGCTATTCTGCAAATATGCATTTGAAAATAATGATGATGGTCAAGATAAGAGTGAGCTTTGTACTGAAATTGTGAAAAAGGTTGGGGGACTTCCATTGGCTTTGATATTGATTGGATCCGCTTTGCGAAATAAAGATGAAGCTAAATGGAAAGAAATGTTAAGGCATCTCTGTCATGTTGAAGAAGAATTCTTCACTACAATAGCAAACAAGAGAAATCAGAAGAATTGTACTATGAAGCTGGAGAATGTCCAAGTGAAGAATGAGACGATTATCACCTTCCAAGACGACGTTAAAGAATCGAGCTTCTCAAATTTTTGGAACCGTTTAATCAGTAAAGAATATGTGGAAAAAGTACAGGTAAATGAACCTTTTTACTTAAAATTTTGAAGCATTCATCATATCCAATCTCTACCCTTTGCAGATAATTGAGAAGAGTTTCTTATGAAGAAAAGATTGAGGGGAAAAAGGCAAACAAATAATGTTTTTGTTTGCTAAATTGAAAAATTGTGAATTATTTTGTTTAGCCTCGGTTGATAACCATTTCGTTTTTCATTTTTTTGTTTATTAAAAGCTACATTTTTTCTTTTTAGTTTTCAAAAAATAGTTACCAAATAGGTGTTTAGTTATTGTTCTTCATAAACCGTTTTTCTTAATAAGGATGTGTAATTGTAACTTTGGCTTCATCATCTTTGTCATGCAGACTAACAAGGTTGATTCCAATCAGAATCAGGCAGCTTCTTCATGGAAAATTGCTAAACATAGAACAAAAAGAAAGACAATAATTAGGACAATGGGGAATATGAAACGACAACGGGTGATACAACAAAAAAATGATGGTGACTTAAGCGACGTCTACGTACATCAATGGGGTCCTCAGTTCCACTTGGACAGTGACCACTGCAAATACCGAGCTTCCTTTTTATTCTAA

mRNA sequence

ATGAGAGAGTACAATGTGAAGTTACTTTCTCAAGGAAATGCCAACTTGCTATTCTGCAAATATGCATTTGAAAATAATGATGATGGTCAAGATAAGAGTGAGCTTTGTACTGAAATTGTGAAAAAGGTTGGGGGACTTCCATTGGCTTTGATATTGATTGGATCCGCTTTGCGAAATAAAGATGAAGCTAAATGGAAAGAAATGTTAAGGCATCTCTGTCATGTTGAAGAAGAATTCTTCACTACAATAGCAAACAAGAGAAATCAGAAGAATTGTACTATGAAGCTGGAGAATGTCCAAGTGAAGAATGAGACGATTATCACCTTCCAAGACGACGTTAAAGAATCGAGCTTCTCAAATTTTTGGAACCGTTTAATCAGTAAAGAATATGTGGAAAAAGTACAGACTAACAAGGTTGATTCCAATCAGAATCAGGCAGCTTCTTCATGGAAAATTGCTAAACATAGAACAAAAAGAAAGACAATAATTAGGACAATGGGGAATATGAAACGACAACGGGTGATACAACAAAAAAATGATGGTGACTTAAGCGACGTCTACGTACATCAATGGGGTCCTCAGTTCCACTTGGACAGTGACCACTGCAAATACCGAGCTTCCTTTTTATTCTAA

Coding sequence (CDS)

ATGAGAGAGTACAATGTGAAGTTACTTTCTCAAGGAAATGCCAACTTGCTATTCTGCAAATATGCATTTGAAAATAATGATGATGGTCAAGATAAGAGTGAGCTTTGTACTGAAATTGTGAAAAAGGTTGGGGGACTTCCATTGGCTTTGATATTGATTGGATCCGCTTTGCGAAATAAAGATGAAGCTAAATGGAAAGAAATGTTAAGGCATCTCTGTCATGTTGAAGAAGAATTCTTCACTACAATAGCAAACAAGAGAAATCAGAAGAATTGTACTATGAAGCTGGAGAATGTCCAAGTGAAGAATGAGACGATTATCACCTTCCAAGACGACGTTAAAGAATCGAGCTTCTCAAATTTTTGGAACCGTTTAATCAGTAAAGAATATGTGGAAAAAGTACAGACTAACAAGGTTGATTCCAATCAGAATCAGGCAGCTTCTTCATGGAAAATTGCTAAACATAGAACAAAAAGAAAGACAATAATTAGGACAATGGGGAATATGAAACGACAACGGGTGATACAACAAAAAAATGATGGTGACTTAAGCGACGTCTACGTACATCAATGGGGTCCTCAGTTCCACTTGGACAGTGACCACTGCAAATACCGAGCTTCCTTTTTATTCTAA

Protein sequence

MREYNVKLLSQGNANLLFCKYAFENNDDGQDKSELCTEIVKKVGGLPLALILIGSALRNKDEAKWKEMLRHLCHVEEEFFTTIANKRNQKNCTMKLENVQVKNETIITFQDDVKESSFSNFWNRLISKEYVEKVQTNKVDSNQNQAASSWKIAKHRTKRKTIIRTMGNMKRQRVIQQKNDGDLSDVYVHQWGPQFHLDSDHCKYRASFLF

Homology

[Close]

BLAST of PI0023559.1 vs. ExPASy Swiss-Prot
Match: F4JNB7 (Disease resistance protein RPP5 OS=Arabidopsis thaliana OX=3702 GN=RPP5 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.0e-07
Identity = 29/69 (42.03%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 4   YNVKLLSQGNANLLFCKYAFENNDDGQDKSELCTEIVKKVGGLPLALILIGSALRNKDEA 63
           Y VKL SQG A  + C+ AF  +    D  EL  E+ K  G LPL L ++GS+LR + + 
Sbjct: 339 YEVKLPSQGLALTMLCRSAFGKDSPPDDFKELAFEVAKLAGHLPLGLNVLGSSLRRRGKK 398

Query: 64  KWKEMLRHL 73
           +W EM+  L
Sbjct: 399 EWMEMMPRL 407

[Close]

BLAST of PI0023559.1 vs. ExPASy Swiss-Prot
Match: F4JNA9 (Disease resistance protein RPP4 OS=Arabidopsis thaliana OX=3702 GN=RPP4 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.1e-07
Identity = 27/69 (39.13%), Postives = 42/69 (60.87%), Query Frame = 0


Query: 4   YNVKLLSQGNANLLFCKYAFENNDDGQDKSELCTEIVKKVGGLPLALILIGSALRNKDEA 63
           Y V+L SQG A  +  +YAF  +    D  EL  E+ + VG LPL L ++GS+L+ +D+ 
Sbjct: 337 YEVELPSQGLALKMISQYAFGKDSPPDDFKELAFEVAELVGSLPLGLSVLGSSLKGRDKD 396

Query: 64  KWKEMLRHL 73
           +W +M+  L
Sbjct: 397 EWVKMMPRL 405

[Close]

BLAST of PI0023559.1 vs. ExPASy Swiss-Prot
Match: F4KHH8 (Disease resistance protein RPS6 OS=Arabidopsis thaliana OX=3702 GN=RPS6 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.6e-05
Identity = 27/69 (39.13%), Postives = 38/69 (55.07%), Query Frame = 0


Query: 4   YNVKLLSQGNANLLFCKYAFENNDDGQDKSELCTEIVKKVGGLPLALILIGSALRNKDEA 63
           Y V L S   A  +FC+ AF+ N    D  EL +E+  + G LPL L ++GS LR  ++ 
Sbjct: 346 YKVCLPSNALALEMFCRSAFKKNSPPDDFLELSSEVALRAGNLPLGLNVLGSNLRGINKG 405

Query: 64  KWKEMLRHL 73
            W +ML  L
Sbjct: 406 YWIDMLPRL 414

[Close]

BLAST of PI0023559.1 vs. ExPASy Swiss-Prot
Match: P0DKH6 (Disease resistance protein RPS6 OS=Arabidopsis thaliana OX=3702 GN=RPS6 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.6e-05
Identity = 27/69 (39.13%), Postives = 38/69 (55.07%), Query Frame = 0


Query: 4   YNVKLLSQGNANLLFCKYAFENNDDGQDKSELCTEIVKKVGGLPLALILIGSALRNKDEA 63
           Y V L S   A  +FC+ AF+ N    D  EL +E+  + G LPL L ++GS LR  ++ 
Sbjct: 346 YKVCLPSNALALEMFCRSAFKKNSPPDDFLELSSEVALRAGNLPLGLNVLGSNLRGINKG 405

Query: 64  KWKEMLRHL 73
            W +ML  L
Sbjct: 406 YWIDMLPRL 414

[Close]

BLAST of PI0023559.1 vs. ExPASy Swiss-Prot
Match: Q9CAK1 (Disease resistance protein RML1B OS=Arabidopsis thaliana OX=3702 GN=RLM1B PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.1e-05
Identity = 24/69 (34.78%), Postives = 37/69 (53.62%), Query Frame = 0


Query: 4   YNVKLLSQGNANLLFCKYAFENNDDGQDKSELCTEIVKKVGGLPLALILIGSALRNKDEA 63
           Y+V   S  +A  + C YAF+         EL   + K  G LPL L ++GS+LR K E 
Sbjct: 341 YHVGFPSDEDALKILCSYAFKQTSPRHGFEELSESVTKLCGKLPLGLCVVGSSLRGKKED 400

Query: 64  KWKEMLRHL 73
           +W++++  L
Sbjct: 401 EWEDVVTRL 409

[Close]

BLAST of PI0023559.1 vs. ExPASy TrEMBL
Match: A0A5A7T8K2 (TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G00970 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 4.7e-40
Identity = 88/107 (82.24%), Postives = 97/107 (90.65%), Query Frame = 0


Query: 1   MREYNVKLLSQGNANLLFCKYAFENNDDGQDKSE-LCTEIVKKVGGLPLALILIGSALRN 60
           MREYNVKLLSQ NANLLFCKYAFENN++ Q  ++ LCTEIVKKVG LPLALILIGSALRN
Sbjct: 796 MREYNVKLLSQENANLLFCKYAFENNNNAQHTNDALCTEIVKKVGRLPLALILIGSALRN 855

Query: 61  KDEAKWKEMLRHLCHVEEEFFTTIANKRNQKNCTMKLENVQVKNETI 107
           KD AKWKEMLR LC+VEE+FF+TI N+R+QKNCTMKL NVQVKNETI
Sbjct: 856 KDAAKWKEMLRILCNVEEDFFSTITNERDQKNCTMKLGNVQVKNETI 902

[Close]

BLAST of PI0023559.1 vs. ExPASy TrEMBL
Match: A0A6J1CJX6 (LOW QUALITY PROTEIN: TMV resistance protein N-like OS=Momordica charantia OX=3673 GN=LOC111012105 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.4e-15
Identity = 47/91 (51.65%), Postives = 60/91 (65.93%), Query Frame = 0


Query: 1    MREYNVKLLSQGNANLLFCKYAFENNDDGQDKSELCTEIVKKVGGLPLALILIGSALRNK 60
            ++EYNV LLS  +A  LFCK+AF++     DK+ LC EIV+KVG LPL L  IGS L  K
Sbjct: 1301 LQEYNVDLLSHESAYSLFCKHAFKDGLPDNDKNHLCNEIVEKVGRLPLPLRTIGSFLHKK 1360

Query: 61   DEAKWKEMLRHLCHVEEEFFTTIANKRNQKN 92
            D   W+E L+ L  VEE+FF TI  +  +KN
Sbjct: 1361 DLIVWRETLKSLGQVEEDFFDTILQRSRRKN 1391

[Close]

BLAST of PI0023559.1 vs. ExPASy TrEMBL
Match: A0A5A7T8X1 (TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G001250 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.3e-13
Identity = 50/99 (50.51%), Postives = 64/99 (64.65%), Query Frame = 0


Query: 1    MREYNVKLLSQGNANLLFCKYAFENNDDGQDKSELCTEIVKKVGGLPLALILIGSALRNK 60
            ++EY V+LLS  +A  LFCK AF   D   DK++LC+EIV+KVG LPLAL  IGS L NK
Sbjct: 932  VQEYKVELLSPESAYSLFCKNAF--GDGPYDKNDLCSEIVEKVGRLPLALRTIGSYLHNK 991

Query: 61   DEAKWKEMLRHLCHVEEEFFTTIANKRNQKNCTMKLENV 100
            +   W E L+ L  VE+ FF TI++ R QK  T  L  +
Sbjct: 992  ELDVWNETLKRLDEVEQNFFDTISH-RTQKKTTPTLGQI 1027

[Close]

BLAST of PI0023559.1 vs. ExPASy TrEMBL
Match: A0A5A7TDI7 (TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G001270 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.7e-13
Identity = 50/99 (50.51%), Postives = 65/99 (65.66%), Query Frame = 0


Query: 1    MREYNVKLLSQGNANLLFCKYAFENNDDGQDKSELCTEIVKKVGGLPLALILIGSALRNK 60
            ++EY V+LLS+ +A  LFCK AF   D   DK++LC+EIV+KVG LPLAL  IGS L NK
Sbjct: 1160 VQEYKVELLSRESAYSLFCKNAF--GDGPSDKNDLCSEIVEKVGRLPLALRTIGSYLHNK 1219

Query: 61   DEAKWKEMLRHLCHVEEEFFTTIANKRNQKNCTMKLENV 100
            +   W E L+ L  VE+ FF TI ++R QK  T  L  +
Sbjct: 1220 ELEVWIETLKRLDEVEQNFFDTI-SQRTQKKTTPTLGQI 1255

[Close]

BLAST of PI0023559.1 vs. ExPASy TrEMBL
Match: A0A5D3BL21 (TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001210 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.7e-13
Identity = 50/99 (50.51%), Postives = 65/99 (65.66%), Query Frame = 0


Query: 1    MREYNVKLLSQGNANLLFCKYAFENNDDGQDKSELCTEIVKKVGGLPLALILIGSALRNK 60
            ++EY V+LLS+ +A  LFCK AF   D   DK++LC+EIV+KVG LPLAL  IGS L NK
Sbjct: 932  VQEYKVELLSRESAYSLFCKNAF--GDGPSDKNDLCSEIVEKVGRLPLALRTIGSYLHNK 991

Query: 61   DEAKWKEMLRHLCHVEEEFFTTIANKRNQKNCTMKLENV 100
            +   W E L+ L  VE+ FF TI ++R QK  T  L  +
Sbjct: 992  ELEVWIETLKRLDEVEQNFFDTI-SQRTQKKTTPTLGQI 1027

[Close]

BLAST of PI0023559.1 vs. NCBI nr
Match: KAA0039303.1 (TMV resistance protein N-like [Cucumis melo var. makuwa])

HSP 1 Score: 174.5 bits (441), Expect = 9.8e-40
Identity = 88/107 (82.24%), Postives = 97/107 (90.65%), Query Frame = 0


Query: 1   MREYNVKLLSQGNANLLFCKYAFENNDDGQDKSE-LCTEIVKKVGGLPLALILIGSALRN 60
           MREYNVKLLSQ NANLLFCKYAFENN++ Q  ++ LCTEIVKKVG LPLALILIGSALRN
Sbjct: 796 MREYNVKLLSQENANLLFCKYAFENNNNAQHTNDALCTEIVKKVGRLPLALILIGSALRN 855

Query: 61  KDEAKWKEMLRHLCHVEEEFFTTIANKRNQKNCTMKLENVQVKNETI 107
           KD AKWKEMLR LC+VEE+FF+TI N+R+QKNCTMKL NVQVKNETI
Sbjct: 856 KDAAKWKEMLRILCNVEEDFFSTITNERDQKNCTMKLGNVQVKNETI 902

[Close]

BLAST of PI0023559.1 vs. NCBI nr
Match: XP_038889143.1 (disease resistance protein RML1B-like [Benincasa hispida])

HSP 1 Score: 134.8 bits (338), Expect = 8.6e-28
Identity = 68/84 (80.95%), Postives = 73/84 (86.90%), Query Frame = 0


Query: 1   MREYNVKLLSQGNANLLFCKYAFENNDDGQDKSELCTEIVKKVGGLPLALILIGSALRNK 60
           MREYNVKLLSQ NANLLFCKYAF NN DGQDK+ELCTEIVKKVG  PLALI IGSAL NK
Sbjct: 171 MREYNVKLLSQENANLLFCKYAFGNN-DGQDKNELCTEIVKKVGRHPLALIFIGSALHNK 230

Query: 61  DEAKWKEMLRHLCHVEEEFFTTIA 85
           D A WKEMLR LC+VEE+FF+ I+
Sbjct: 231 DVATWKEMLRVLCNVEEDFFSIIS 253

[Close]

BLAST of PI0023559.1 vs. NCBI nr
Match: XP_038890436.1 (LOW QUALITY PROTEIN: TMV resistance protein N-like [Benincasa hispida])

HSP 1 Score: 96.3 bits (238), Expect = 3.4e-16
Identity = 53/91 (58.24%), Postives = 65/91 (71.43%), Query Frame = 0


Query: 1    MREYNVKLLSQGNANLLFCKYAFENNDDGQDKSELCTEIVKKVGGLPLALILIGSALRNK 60
            ++EYNV+LLS  +A  LFC+YAFE  D   DK ELC EIV+KVG LPLAL  IGS L NK
Sbjct: 1133 VKEYNVELLSHESAYSLFCRYAFE--DRPFDKKELCNEIVEKVGRLPLALKTIGSYLHNK 1192

Query: 61   DEAKWKEMLRHLCHVEEEFFTTIANKRNQKN 92
            +   WKE L+ L  VE+EFF TI  +R++KN
Sbjct: 1193 ELVVWKETLKRLDEVEQEFFDTIL-QRSRKN 1220

[Close]

BLAST of PI0023559.1 vs. NCBI nr
Match: XP_022141839.1 (LOW QUALITY PROTEIN: TMV resistance protein N-like [Momordica charantia])

HSP 1 Score: 92.4 bits (228), Expect = 4.9e-15
Identity = 47/91 (51.65%), Postives = 60/91 (65.93%), Query Frame = 0


Query: 1    MREYNVKLLSQGNANLLFCKYAFENNDDGQDKSELCTEIVKKVGGLPLALILIGSALRNK 60
            ++EYNV LLS  +A  LFCK+AF++     DK+ LC EIV+KVG LPL L  IGS L  K
Sbjct: 1301 LQEYNVDLLSHESAYSLFCKHAFKDGLPDNDKNHLCNEIVEKVGRLPLPLRTIGSFLHKK 1360

Query: 61   DEAKWKEMLRHLCHVEEEFFTTIANKRNQKN 92
            D   W+E L+ L  VEE+FF TI  +  +KN
Sbjct: 1361 DLIVWRETLKSLGQVEEDFFDTILQRSRRKN 1391

[Close]

BLAST of PI0023559.1 vs. NCBI nr
Match: KAA0039328.1 (TMV resistance protein N-like [Cucumis melo var. makuwa])

HSP 1 Score: 86.7 bits (213), Expect = 2.7e-13
Identity = 50/99 (50.51%), Postives = 64/99 (64.65%), Query Frame = 0


Query: 1    MREYNVKLLSQGNANLLFCKYAFENNDDGQDKSELCTEIVKKVGGLPLALILIGSALRNK 60
            ++EY V+LLS  +A  LFCK AF   D   DK++LC+EIV+KVG LPLAL  IGS L NK
Sbjct: 932  VQEYKVELLSPESAYSLFCKNAF--GDGPYDKNDLCSEIVEKVGRLPLALRTIGSYLHNK 991

Query: 61   DEAKWKEMLRHLCHVEEEFFTTIANKRNQKNCTMKLENV 100
            +   W E L+ L  VE+ FF TI++ R QK  T  L  +
Sbjct: 992  ELDVWNETLKRLDEVEQNFFDTISH-RTQKKTTPTLGQI 1027

[Close]

BLAST of PI0023559.1 vs. TAIR 10
Match: AT4G16940.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 61.6 bits (148), Expect = 8.6e-10
Identity = 30/69 (43.48%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 4   YNVKLLSQGNANLLFCKYAFENNDDGQDKSELCTEIVKKVGGLPLALILIGSALRNKDEA 63
           Y VKL SQG A  + C+YAF       D  EL  E+ K  G LPL L ++GS+L+ + + 
Sbjct: 295 YEVKLPSQGLALKMICQYAFGKYSPPDDFKELAFEVAKLAGNLPLGLSVLGSSLKRRSKE 354

Query: 64  KWKEMLRHL 73
           +W EML  L
Sbjct: 355 EWMEMLAEL 363

[Close]

BLAST of PI0023559.1 vs. TAIR 10
Match: AT4G16960.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 61.6 bits (148), Expect = 8.6e-10
Identity = 30/69 (43.48%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 4   YNVKLLSQGNANLLFCKYAFENNDDGQDKSELCTEIVKKVGGLPLALILIGSALRNKDEA 63
           Y VKL SQG A  + C+YAF       D  EL  E+ K  G LPL L ++GS+L+ + + 
Sbjct: 339 YEVKLPSQGLALKMICQYAFGKYSPPDDFKELAFEVAKLAGNLPLGLSVLGSSLKRRSKE 398

Query: 64  KWKEMLRHL 73
           +W EML  L
Sbjct: 399 EWMEMLAEL 407

[Close]

BLAST of PI0023559.1 vs. TAIR 10
Match: AT4G16950.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 58.5 bits (140), Expect = 7.3e-09
Identity = 29/69 (42.03%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 4   YNVKLLSQGNANLLFCKYAFENNDDGQDKSELCTEIVKKVGGLPLALILIGSALRNKDEA 63
           Y VKL SQG A  + C+ AF  +    D  EL  E+ K  G LPL L ++GS+LR + + 
Sbjct: 339 YEVKLPSQGLALTMLCRSAFGKDSPPDDFKELAFEVAKLAGHLPLGLNVLGSSLRRRGKK 398

Query: 64  KWKEMLRHL 73
           +W EM+  L
Sbjct: 399 EWMEMMPRL 407

[Close]

BLAST of PI0023559.1 vs. TAIR 10
Match: AT4G16950.2 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 58.5 bits (140), Expect = 7.3e-09
Identity = 29/69 (42.03%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 4   YNVKLLSQGNANLLFCKYAFENNDDGQDKSELCTEIVKKVGGLPLALILIGSALRNKDEA 63
           Y VKL SQG A  + C+ AF  +    D  EL  E+ K  G LPL L ++GS+LR + + 
Sbjct: 339 YEVKLPSQGLALTMLCRSAFGKDSPPDDFKELAFEVAKLAGHLPLGLNVLGSSLRRRGKK 398

Query: 64  KWKEMLRHL 73
           +W EM+  L
Sbjct: 399 EWMEMMPRL 407

[Close]

BLAST of PI0023559.1 vs. TAIR 10
Match: AT4G16860.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 56.2 bits (134), Expect = 3.6e-08
Identity = 27/69 (39.13%), Postives = 42/69 (60.87%), Query Frame = 0


Query: 4   YNVKLLSQGNANLLFCKYAFENNDDGQDKSELCTEIVKKVGGLPLALILIGSALRNKDEA 63
           Y V+L SQG A  +  +YAF  +    D  EL  E+ + VG LPL L ++GS+L+ +D+ 
Sbjct: 337 YEVELPSQGLALKMISQYAFGKDSPPDDFKELAFEVAELVGSLPLGLSVLGSSLKGRDKD 396

Query: 64  KWKEMLRHL 73
           +W +M+  L
Sbjct: 397 EWVKMMPRL 405

The following BLAST results are available for this feature:

BLAST of PI0023559.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JNB7	1.0e-07	42.03	Disease resistance protein RPP5 OS=Arabidopsis thaliana OX=3702 GN=RPP5 PE=1 SV=...	[more]
F4JNA9	5.1e-07	39.13	Disease resistance protein RPP4 OS=Arabidopsis thaliana OX=3702 GN=RPP4 PE=1 SV=...	[more]
F4KHH8	1.6e-05	39.13	Disease resistance protein RPS6 OS=Arabidopsis thaliana OX=3702 GN=RPS6 PE=1 SV=...	[more]
P0DKH6	1.6e-05	39.13	Disease resistance protein RPS6 OS=Arabidopsis thaliana OX=3702 GN=RPS6 PE=1 SV=...	[more]
Q9CAK1	2.1e-05	34.78	Disease resistance protein RML1B OS=Arabidopsis thaliana OX=3702 GN=RLM1B PE=2 S...	[more]

BLAST of PI0023559.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T8K2	4.7e-40	82.24	TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A6J1CJX6	2.4e-15	51.65	LOW QUALITY PROTEIN: TMV resistance protein N-like OS=Momordica charantia OX=367...	[more]
A0A5A7T8X1	1.3e-13	50.51	TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5A7TDI7	1.7e-13	50.51	TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5D3BL21	1.7e-13	50.51	TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of PI0023559.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0039303.1	9.8e-40	82.24	TMV resistance protein N-like [Cucumis melo var. makuwa]	[more]
XP_038889143.1	8.6e-28	80.95	disease resistance protein RML1B-like [Benincasa hispida]	[more]
XP_038890436.1	3.4e-16	58.24	LOW QUALITY PROTEIN: TMV resistance protein N-like [Benincasa hispida]	[more]
XP_022141839.1	4.9e-15	51.65	LOW QUALITY PROTEIN: TMV resistance protein N-like [Momordica charantia]	[more]
KAA0039328.1	2.7e-13	50.51	TMV resistance protein N-like [Cucumis melo var. makuwa]	[more]

BLAST of PI0023559.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16940.1	8.6e-10	43.48	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT4G16960.1	8.6e-10	43.48	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT4G16950.1	7.3e-09	42.03	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT4G16950.2	7.3e-09	42.03	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT4G16860.1	3.6e-08	39.13	Disease resistance protein (TIR-NBS-LRR class) family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002182	NB-ARC	PFAM	PF00931	NB-ARC	coord: 4..89 e-value: 2.0E-10 score: 40.3
IPR042197	Apoptotic protease-activating factors, helical domain	GENE3D	1.10.8.430		coord: 9..93 e-value: 1.4E-12 score: 49.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 3..73

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0023559	PI0023559	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0023559.1-exon	PI0023559.1-exon-chr09:21236123..21236350	exon
PI0023559.1-exon	PI0023559.1-exon-chr09:21236694..21237098	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0023559.1-cds	PI0023559.1-cds-chr09:21236123..21236350	CDS
PI0023559.1-cds	PI0023559.1-cds-chr09:21236694..21237098	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0023559.1	PI0023559.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
molecular_function	GO:0043531	ADP binding