PI0023519.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0023519.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Plant transposase
Location	chr04: 16692429 .. 16692953 (-)
Sequence length	525
RNA-Seq Expression	PI0023519.1
Synteny	PI0023519.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTTAACTCAACCCGGTAGCGATGATGAGGAGAACGGGGAAGAAGCTCTTCATTTGATAAAGAGACCCGATTCAAAGATCGTAAATGATATAGATAATGTCGCCAAGCCTAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCCTAACCCACTTCACCACAATAACTTGGATTGTGAGGAAGCTGCAACTCTACTTCCATCTTCTCATGTTAATAAAATTATTCATCCTCAGTCTAAAAGACCACAAAATAGACCATTAGACTCACCTGCTGCTCGTACTAGATCAGCAGTTCGTAGATTACCCATTGAAGAGGTTCAATCTCAATCAGAGAAAAATGTGGCCGAAGTTGATACCAACATGCCGGAACCCAAAAAGACAAGAGGTCGGACCAAGATGCAAACAATAGCGGTGGAGCCAGAAATGAAACTAAATATAAGGTATAACGAATATGGACAACCTATTGGAGAACATCAGTTGGGTTGTCCACATTTTTGGGTTCACTTGTCAGAGAAGTGA

mRNA sequence

ATGGACTTAACTCAACCCGGTAGCGATGATGAGGAGAACGGGGAAGAAGCTCTTCATTTGATAAAGAGACCCGATTCAAAGATCGTAAATGATATAGATAATGTCGCCAAGCCTAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCCTAACCCACTTCACCACAATAACTTGGATTGTGAGGAAGCTGCAACTCTACTTCCATCTTCTCATGTTAATAAAATTATTCATCCTCAGTCTAAAAGACCACAAAATAGACCATTAGACTCACCTGCTGCTCGTACTAGATCAGCAGTTCGTAGATTACCCATTGAAGAGGTTCAATCTCAATCAGAGAAAAATGTGGCCGAAGTTGATACCAACATGCCGGAACCCAAAAAGACAAGAGGTCGGACCAAGATGCAAACAATAGCGGTGGAGCCAGAAATGAAACTAAATATAAGGTATAACGAATATGGACAACCTATTGGAGAACATCAGTTGGGTTGTCCACATTTTTGGGTTCACTTGTCAGAGAAGTGA

Coding sequence (CDS)

ATGGACTTAACTCAACCCGGTAGCGATGATGAGGAGAACGGGGAAGAAGCTCTTCATTTGATAAAGAGACCCGATTCAAAGATCGTAAATGATATAGATAATGTCGCCAAGCCTAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCCTAACCCACTTCACCACAATAACTTGGATTGTGAGGAAGCTGCAACTCTACTTCCATCTTCTCATGTTAATAAAATTATTCATCCTCAGTCTAAAAGACCACAAAATAGACCATTAGACTCACCTGCTGCTCGTACTAGATCAGCAGTTCGTAGATTACCCATTGAAGAGGTTCAATCTCAATCAGAGAAAAATGTGGCCGAAGTTGATACCAACATGCCGGAACCCAAAAAGACAAGAGGTCGGACCAAGATGCAAACAATAGCGGTGGAGCCAGAAATGAAACTAAATATAAGGTATAACGAATATGGACAACCTATTGGAGAACATCAGTTGGGTTGTCCACATTTTTGGGTTCACTTGTCAGAGAAGTGA

Protein sequence

MDLTQPGSDDEENGEEALHLIKRPDSKIVNDIDNVAKPSIEREIRETSPSPNPLHHNNLDCEEAATLLPSSHVNKIIHPQSKRPQNRPLDSPAARTRSAVRRLPIEEVQSQSEKNVAEVDTNMPEPKKTRGRTKMQTIAVEPEMKLNIRYNEYGQPIGEHQLGCPHFWVHLSEK

Homology

[Close]

BLAST of PI0023519.1 vs. ExPASy TrEMBL
Match: A0A5A7UBP2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G00210 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.9e-42
Identity = 106/171 (61.99%), Postives = 117/171 (68.42%), Query Frame = 0


Query: 1   MDLTQPGSDDEENGEEALHLIKRPDSKIVNDIDNVAKPSIEREIRETSPSPNPLHHNNLD 60
           MDLTQP +DDEEN  EALHL                    E+EIRETSP P+PL      
Sbjct: 1   MDLTQPSTDDEENEGEALHL-------------------REKEIRETSPLPDPLP----- 60

Query: 61  CEEAATLLPSSHVNKIIHPQSKRPQNRPLDSPAARTRSAVRRLPIEEVQSQSEKN----V 120
            EEA T LPSSHVN  IHPQS+RP NRPLDSPA RTRSAVR+LP+EEV+SQ E+N     
Sbjct: 61  -EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDC 120

Query: 121 AEVDTNMPEPKKTRGRTKMQTIAVEPEMKLNIRYNEYGQPIGEHQLGCPHF 168
            EV T  P PKKTRGRTKMQTIA+EPEMKL+IRYN YGQPIGE  +G   F
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSF 146

[Close]

BLAST of PI0023519.1 vs. ExPASy TrEMBL
Match: A0A5A7SRN7 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00120 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.9e-42
Identity = 106/171 (61.99%), Postives = 117/171 (68.42%), Query Frame = 0


Query: 1   MDLTQPGSDDEENGEEALHLIKRPDSKIVNDIDNVAKPSIEREIRETSPSPNPLHHNNLD 60
           MDLTQP +DDEEN  EALHL                    E+EIRETSP P+PL      
Sbjct: 1   MDLTQPSTDDEENEGEALHL-------------------REKEIRETSPLPDPLP----- 60

Query: 61  CEEAATLLPSSHVNKIIHPQSKRPQNRPLDSPAARTRSAVRRLPIEEVQSQSEKN----V 120
            EEA T LPSSHVN  IHPQS+RP NRPLDSPA RTRSAVR+LP+EEV+SQ E+N     
Sbjct: 61  -EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDC 120

Query: 121 AEVDTNMPEPKKTRGRTKMQTIAVEPEMKLNIRYNEYGQPIGEHQLGCPHF 168
            EV T  P PKKTRGRTKMQTIA+EPEMKL+IRYN YGQPIGE  +G   F
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSF 146

[Close]

BLAST of PI0023519.1 vs. ExPASy TrEMBL
Match: A0A5A7TIU1 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G002550 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 7.1e-42
Identity = 106/171 (61.99%), Postives = 116/171 (67.84%), Query Frame = 0


Query: 1   MDLTQPGSDDEENGEEALHLIKRPDSKIVNDIDNVAKPSIEREIRETSPSPNPLHHNNLD 60
           MDLTQP +DDEEN  EALHL                    E+EIRETSP P+PL      
Sbjct: 1   MDLTQPSTDDEENEGEALHL-------------------REKEIRETSPLPDPLP----- 60

Query: 61  CEEAATLLPSSHVNKIIHPQSKRPQNRPLDSPAARTRSAVRRLPIEEVQSQSEKN----V 120
            EEA T LPSSHVN  IHPQSKRP NRPLDSPA  TRSAVR+LP+EEV+SQ E+N     
Sbjct: 61  -EEATTPLPSSHVNATIHPQSKRPPNRPLDSPAGCTRSAVRKLPVEEVESQLEENENVDC 120

Query: 121 AEVDTNMPEPKKTRGRTKMQTIAVEPEMKLNIRYNEYGQPIGEHQLGCPHF 168
            EV T  P PKKTRGRTKMQTIA+EPEMKL+IRYN YGQPIGE  +G   F
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSF 146

[Close]

BLAST of PI0023519.1 vs. ExPASy TrEMBL
Match: A0A5A7UVF2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G003770 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.2e-41
Identity = 105/171 (61.40%), Postives = 116/171 (67.84%), Query Frame = 0


Query: 1   MDLTQPGSDDEENGEEALHLIKRPDSKIVNDIDNVAKPSIEREIRETSPSPNPLHHNNLD 60
           MDLTQP +DDEE   EALHL                    E+EIRETSP P+PL      
Sbjct: 1   MDLTQPSTDDEETEGEALHL-------------------REKEIRETSPLPDPLP----- 60

Query: 61  CEEAATLLPSSHVNKIIHPQSKRPQNRPLDSPAARTRSAVRRLPIEEVQSQSEKN----V 120
            EEA T LPSSHVN  IHPQS+RP NRPLDSPA RTRSAVR+LP+EEV+SQ E+N     
Sbjct: 61  -EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEENENVYC 120

Query: 121 AEVDTNMPEPKKTRGRTKMQTIAVEPEMKLNIRYNEYGQPIGEHQLGCPHF 168
            EV TN P PKKTR RTKMQTIA+EPEMKL+IRYN YGQPIGE  +G   F
Sbjct: 121 EEVHTNEPSPKKTRDRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSF 146

[Close]

BLAST of PI0023519.1 vs. ExPASy TrEMBL
Match: A0A5A7UNU1 (Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00350 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.6e-41
Identity = 105/171 (61.40%), Postives = 116/171 (67.84%), Query Frame = 0


Query: 1   MDLTQPGSDDEENGEEALHLIKRPDSKIVNDIDNVAKPSIEREIRETSPSPNPLHHNNLD 60
           MDLTQP +DDEEN  EALHL                    E+EIRETSP P+PL      
Sbjct: 1   MDLTQPSTDDEENEGEALHL-------------------REKEIRETSPLPDPL------ 60

Query: 61  CEEAATLLPSSHVNKIIHPQSKRPQNRPLDSPAARTRSAVRRLPIEEVQSQSEKN----V 120
            EEA T LPSSHVN  IHPQS+RP NRPLDSPA RTRSAVR+L +EEV+SQ E+N     
Sbjct: 61  LEEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLLVEEVESQLEENENVDC 120

Query: 121 AEVDTNMPEPKKTRGRTKMQTIAVEPEMKLNIRYNEYGQPIGEHQLGCPHF 168
            EV T  P PKKTRGRTKMQTIA+EPEMKL+IRYN YGQPIGE  +G   F
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSF 146

[Close]

BLAST of PI0023519.1 vs. NCBI nr
Match: KAA0032201.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 182.2 bits (461), Expect = 3.9e-42
Identity = 106/171 (61.99%), Postives = 117/171 (68.42%), Query Frame = 0


Query: 1   MDLTQPGSDDEENGEEALHLIKRPDSKIVNDIDNVAKPSIEREIRETSPSPNPLHHNNLD 60
           MDLTQP +DDEEN  EALHL                    E+EIRETSP P+PL      
Sbjct: 1   MDLTQPSTDDEENEGEALHL-------------------REKEIRETSPLPDPLP----- 60

Query: 61  CEEAATLLPSSHVNKIIHPQSKRPQNRPLDSPAARTRSAVRRLPIEEVQSQSEKN----V 120
            EEA T LPSSHVN  IHPQS+RP NRPLDSPA RTRSAVR+LP+EEV+SQ E+N     
Sbjct: 61  -EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDC 120

Query: 121 AEVDTNMPEPKKTRGRTKMQTIAVEPEMKLNIRYNEYGQPIGEHQLGCPHF 168
            EV T  P PKKTRGRTKMQTIA+EPEMKL+IRYN YGQPIGE  +G   F
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSF 146

[Close]

BLAST of PI0023519.1 vs. NCBI nr
Match: KAA0051001.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 182.2 bits (461), Expect = 3.9e-42
Identity = 106/171 (61.99%), Postives = 117/171 (68.42%), Query Frame = 0


Query: 1   MDLTQPGSDDEENGEEALHLIKRPDSKIVNDIDNVAKPSIEREIRETSPSPNPLHHNNLD 60
           MDLTQP +DDEEN  EALHL                    E+EIRETSP P+PL      
Sbjct: 1   MDLTQPSTDDEENEGEALHL-------------------REKEIRETSPLPDPLP----- 60

Query: 61  CEEAATLLPSSHVNKIIHPQSKRPQNRPLDSPAARTRSAVRRLPIEEVQSQSEKN----V 120
            EEA T LPSSHVN  IHPQS+RP NRPLDSPA RTRSAVR+LP+EEV+SQ E+N     
Sbjct: 61  -EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDC 120

Query: 121 AEVDTNMPEPKKTRGRTKMQTIAVEPEMKLNIRYNEYGQPIGEHQLGCPHF 168
            EV T  P PKKTRGRTKMQTIA+EPEMKL+IRYN YGQPIGE  +G   F
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSF 146

[Close]

BLAST of PI0023519.1 vs. NCBI nr
Match: KAA0041269.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 180.3 bits (456), Expect = 1.5e-41
Identity = 106/171 (61.99%), Postives = 116/171 (67.84%), Query Frame = 0


Query: 1   MDLTQPGSDDEENGEEALHLIKRPDSKIVNDIDNVAKPSIEREIRETSPSPNPLHHNNLD 60
           MDLTQP +DDEEN  EALHL                    E+EIRETSP P+PL      
Sbjct: 1   MDLTQPSTDDEENEGEALHL-------------------REKEIRETSPLPDPLP----- 60

Query: 61  CEEAATLLPSSHVNKIIHPQSKRPQNRPLDSPAARTRSAVRRLPIEEVQSQSEKN----V 120
            EEA T LPSSHVN  IHPQSKRP NRPLDSPA  TRSAVR+LP+EEV+SQ E+N     
Sbjct: 61  -EEATTPLPSSHVNATIHPQSKRPPNRPLDSPAGCTRSAVRKLPVEEVESQLEENENVDC 120

Query: 121 AEVDTNMPEPKKTRGRTKMQTIAVEPEMKLNIRYNEYGQPIGEHQLGCPHF 168
            EV T  P PKKTRGRTKMQTIA+EPEMKL+IRYN YGQPIGE  +G   F
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSF 146

[Close]

BLAST of PI0023519.1 vs. NCBI nr
Match: KAA0057491.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 179.5 bits (454), Expect = 2.5e-41
Identity = 105/171 (61.40%), Postives = 116/171 (67.84%), Query Frame = 0


Query: 1   MDLTQPGSDDEENGEEALHLIKRPDSKIVNDIDNVAKPSIEREIRETSPSPNPLHHNNLD 60
           MDLTQP +DDEE   EALHL                    E+EIRETSP P+PL      
Sbjct: 1   MDLTQPSTDDEETEGEALHL-------------------REKEIRETSPLPDPLP----- 60

Query: 61  CEEAATLLPSSHVNKIIHPQSKRPQNRPLDSPAARTRSAVRRLPIEEVQSQSEKN----V 120
            EEA T LPSSHVN  IHPQS+RP NRPLDSPA RTRSAVR+LP+EEV+SQ E+N     
Sbjct: 61  -EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEENENVYC 120

Query: 121 AEVDTNMPEPKKTRGRTKMQTIAVEPEMKLNIRYNEYGQPIGEHQLGCPHF 168
            EV TN P PKKTR RTKMQTIA+EPEMKL+IRYN YGQPIGE  +G   F
Sbjct: 121 EEVHTNEPSPKKTRDRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSF 146

[Close]

BLAST of PI0023519.1 vs. NCBI nr
Match: KAA0056267.1 (uncharacterized protein E6C27_scaffold226G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 179.1 bits (453), Expect = 3.3e-41
Identity = 105/171 (61.40%), Postives = 116/171 (67.84%), Query Frame = 0


Query: 1   MDLTQPGSDDEENGEEALHLIKRPDSKIVNDIDNVAKPSIEREIRETSPSPNPLHHNNLD 60
           MDLTQP +DDEEN  EALHL                    E+EIRETSP P+PL      
Sbjct: 1   MDLTQPSTDDEENEGEALHL-------------------REKEIRETSPLPDPL------ 60

Query: 61  CEEAATLLPSSHVNKIIHPQSKRPQNRPLDSPAARTRSAVRRLPIEEVQSQSEKN----V 120
            EEA T LPSSHVN  IHPQS+RP NRPLDSPA RTRSAVR+L +EEV+SQ E+N     
Sbjct: 61  LEEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLLVEEVESQLEENENVDC 120

Query: 121 AEVDTNMPEPKKTRGRTKMQTIAVEPEMKLNIRYNEYGQPIGEHQLGCPHF 168
            EV T  P PKKTRGRTKMQTIA+EPEMKL+IRYN YGQPIGE  +G   F
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSF 146

The following BLAST results are available for this feature:

BLAST of PI0023519.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0023519.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UBP2	1.9e-42	61.99	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G0...	[more]
A0A5A7SRN7	1.9e-42	61.99	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00...	[more]
A0A5A7TIU1	7.1e-42	61.99	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00...	[more]
A0A5A7UVF2	1.2e-41	61.40	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G00...	[more]
A0A5A7UNU1	1.6e-41	61.40	Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of PI0023519.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032201.1	3.9e-42	61.99	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0051001.1	3.9e-42	61.99	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0041269.1	1.5e-41	61.99	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0057491.1	2.5e-41	61.40	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0056267.1	3.3e-41	61.40	uncharacterized protein E6C27_scaffold226G00350 [Cucumis melo var. makuwa]	[more]

BLAST of PI0023519.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0023519	PI0023519	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0023519.1-exon	PI0023519.1-exon-chr04:16692429..16692953	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0023519.1-cds	PI0023519.1-cds-chr04:16692429..16692953	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0023519.1	PI0023519.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane