PI0023458.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0023458.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr01: 2753888 .. 2755998 (-)
Sequence length	1410
RNA-Seq Expression	PI0023458.1
Synteny	PI0023458.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAAGGAAGCTCCGAAGCTGGAACAACAACCTTAATCCCAATCTTCTAATTCAAACCCCTAAACCCCAATCTAATTCCCCTTTCTGCACTAAAACCCTTTCCCTGCCCTTCTCTTCCACACCTCCGCCCCAATCAACCATTATCCGTCACCAAATCTTAACCATACGAGACCCTAAAATTTCAGTTATTCCGGTACTGGAGAAGTGGGTCGGCGACGGCAGAGCGATTGGGAAACCGGAACTTCAATATCTTGTTTACCTCACGAAGAACTTTCGCCGTTTCAATCACGCTTTAGAGGTTCGCTTTCCCTTCTCTCACTTCCTCTAATTTCTTAACTGAATTCTTAGTGTGTTGTATTGCAATACAGCTTCCTAGGTTAAAGGAACTTGCTCTTTTCTAGCTTTGAAATGCTAAAAGATAAGGACATGGAACTTCATACGGACACGGGAAGTGAAGTTTCTTTGATAACCATTTTGCTTTTTAAAATTAAGCTTATGAAAATTACTTTCCATCTTTAACGATTTGTTTTATGGTCTACTTTTAAGGATCAATTTCAAAATCCAAGCATGTTTTGAAATTAAAGGGTAAGACAGTTTTTTATTTTACAATCTCTTAAGCATGATTTTCATCTTTTGAAAGCAAATTTTTTATTTAAAAAATAGTTTTGTTTTTTAAATTTGACTAAGAAACTACGAGTATACTTGAAAAAGATGAAAATCATGGTTAAGAAATTGTGACAAAGCCAACACAATTTTCAAAAACCAGATACTAAAACAAAAAATAATATGATTACCAAATGGGCCTAAATCATCTTCAAACGAAACTTAAATGATTATTGAATGGATTCTTAAGACACAGTTCTCTTTAACAGTTTTCAAGCAAGTTCTGAGTTTCTTCGTTTCTTGCTTTTGTCCAGATATCTCAGTGGATGACGGATCGAAGATACTTCATTTTATCGGCGAGCGATGCAGCAATCAGGCTGTTTTTAATCCATAGGGTTCATGGTCTGGAACACGCAGAAAATTACTTCAACAGTATATCTTCTCAGTTAAAAACTTCTAACGTTTATGGTGCTCTTCTCGGTAGTTATGTGAGAGAGAAATCAGTTGAGAAAGCTGAAGCCATCATGCAAGAAATGAGAAAGATGGGCATTGCTAATACGTCCTTTCCTTACAATGTGCTAATTAACCTCTACGCTCAGATTGGGCAGCATGATAAGATTGATCTAATGATTGAAGAAATGAAAATGAAGGGAATACCTCAAGATATTTACTCAATTAGAAATCTTTGGCAGCTTATGTTGCCAAGACAAATATTTCTGGTATGGAAAAGATTCTCAAAAGGATCGAGGAGGATTCTGGACTCAAAGCTGATTGGAGAATTTATTCAATTGCTGCTAATAGATATCTATCAGCTGGGTTGGAAACAAAAGCTATTTCCATGCTAAAGAAAATGGAGGAGAAGCTTCCACCTTATACAAATAAATGCGCATTTGAGTTTCTTCTGTCCCTTTATGAACGAACAGGTCGTAAGAACGAAGTTTACAGGGTTTGGAATACCTTCAAACCATTAACTATACAAACACATGTTCCATATGCTTTAATGATCAGATCTCTAGCCAAGCTTGATGATATTGAAGGGGCTGAAAGGATATTCCAGGAGTGGGAATCAAAGTGTACTGTGTATGACTTTCGGGTGTTGAATCAACTTCTGGTTGCTTATTGCAGGAAAGGTCTTTTTGATAAGGCGGAATCGGTTGTTAACCAAGCAGTGGTTGGAAGAACTCCATACGCCAGCACGTGGAGCGTGTTAGCCATAGGATATGCAGAATACGGACACATGAGCAAATCCGTTGAGATGTTGAAGAAAGCTATGTTAGTCGGAAGGCAAAATTGGAAACCAAAGCGGCCTGAAATTTTGGAAGCTTGTCTGGATTATTTGGAAAAACAAGGAGATGCAGAAACAATGGAGGAAATAGTACGACTTGTAAAAGCTCAGGTACAGTATCGAAGGAGATGTACTACAGATTGCTGAGAACTTCCATAGCAGGGGGTAAACCAGTTCTTAGCATTCTTGAACAGGATCTAAGACGAACTTGTAGTTGGTAA

mRNA sequence

ATGATAAGGAAGCTCCGAAGCTGGAACAACAACCTTAATCCCAATCTTCTAATTCAAACCCCTAAACCCCAATCTAATTCCCCTTTCTGCACTAAAACCCTTTCCCTGCCCTTCTCTTCCACACCTCCGCCCCAATCAACCATTATCCGTCACCAAATCTTAACCATACGAGACCCTAAAATTTCAGTTATTCCGGTACTGGAGAAGTGGGTCGGCGACGGCAGAGCGATTGGGAAACCGGAACTTCAATATCTTGTTTACCTCACGAAGAACTTTCGCCGTTTCAATCACGCTTTAGAGATATCTCAGTGGATGACGGATCGAAGATACTTCATTTTATCGGCGAGCGATGCAGCAATCAGGCTGTTTTTAATCCATAGGGTTCATGGTCTGGAACACGCAGAAAATTACTTCAACAGTATATCTTCTCAGTTAAAAACTTCTAACGTTTATGGTGCTCTTCTCGGTAGTTATGTGAGAGAGAAATCAGTTGAGAAAGCTGAAGCCATCATGCAAGAAATGAGAAAGATGGGCATTGCTAATACGTCCTTTCCTTACAATGTGCTAATTAACCTCTACGCTCAGATTGGGCAGCATGATAAGATTGATCTAATGATTGAAGAAATGAAAATGAAGGGAATACCTCAAGATATTTACTCAATTAGAAATCTTTGGATCGAGGAGGATTCTGGACTCAAAGCTGATTGGAGAATTTATTCAATTGCTGCTAATAGATATCTATCAGCTGGGTTGGAAACAAAAGCTATTTCCATGCTAAAGAAAATGGAGGAGAAGCTTCCACCTTATACAAATAAATGCGCATTTGAGTTTCTTCTGTCCCTTTATGAACGAACAGGTCGTAAGAACGAAGTTTACAGGGTTTGGAATACCTTCAAACCATTAACTATACAAACACATGTTCCATATGCTTTAATGATCAGATCTCTAGCCAAGCTTGATGATATTGAAGGGGCTGAAAGGATATTCCAGGAGTGGGAATCAAAGTGTACTGTGTATGACTTTCGGGTGTTGAATCAACTTCTGGTTGCTTATTGCAGGAAAGGTCTTTTTGATAAGGCGGAATCGGTTGTTAACCAAGCAGTGGTTGGAAGAACTCCATACGCCAGCACGTGGAGCGTGTTAGCCATAGGATATGCAGAATACGGACACATGAGCAAATCCGTTGAGATGTTGAAGAAAGCTATGTTAGTCGGAAGGCAAAATTGGAAACCAAAGCGGCCTGAAATTTTGGAAGCTTGTCTGGATTATTTGGAAAAACAAGGAGATGCAGAAACAATGGAGGAAATAGTACGACTTATGTACTACAGATTGCTGAGAACTTCCATAGCAGGGGGTAAACCAGTTCTTAGCATTCTTGAACAGGATCTAAGACGAACTTGTAGTTGGTAA

Coding sequence (CDS)

ATGATAAGGAAGCTCCGAAGCTGGAACAACAACCTTAATCCCAATCTTCTAATTCAAACCCCTAAACCCCAATCTAATTCCCCTTTCTGCACTAAAACCCTTTCCCTGCCCTTCTCTTCCACACCTCCGCCCCAATCAACCATTATCCGTCACCAAATCTTAACCATACGAGACCCTAAAATTTCAGTTATTCCGGTACTGGAGAAGTGGGTCGGCGACGGCAGAGCGATTGGGAAACCGGAACTTCAATATCTTGTTTACCTCACGAAGAACTTTCGCCGTTTCAATCACGCTTTAGAGATATCTCAGTGGATGACGGATCGAAGATACTTCATTTTATCGGCGAGCGATGCAGCAATCAGGCTGTTTTTAATCCATAGGGTTCATGGTCTGGAACACGCAGAAAATTACTTCAACAGTATATCTTCTCAGTTAAAAACTTCTAACGTTTATGGTGCTCTTCTCGGTAGTTATGTGAGAGAGAAATCAGTTGAGAAAGCTGAAGCCATCATGCAAGAAATGAGAAAGATGGGCATTGCTAATACGTCCTTTCCTTACAATGTGCTAATTAACCTCTACGCTCAGATTGGGCAGCATGATAAGATTGATCTAATGATTGAAGAAATGAAAATGAAGGGAATACCTCAAGATATTTACTCAATTAGAAATCTTTGGATCGAGGAGGATTCTGGACTCAAAGCTGATTGGAGAATTTATTCAATTGCTGCTAATAGATATCTATCAGCTGGGTTGGAAACAAAAGCTATTTCCATGCTAAAGAAAATGGAGGAGAAGCTTCCACCTTATACAAATAAATGCGCATTTGAGTTTCTTCTGTCCCTTTATGAACGAACAGGTCGTAAGAACGAAGTTTACAGGGTTTGGAATACCTTCAAACCATTAACTATACAAACACATGTTCCATATGCTTTAATGATCAGATCTCTAGCCAAGCTTGATGATATTGAAGGGGCTGAAAGGATATTCCAGGAGTGGGAATCAAAGTGTACTGTGTATGACTTTCGGGTGTTGAATCAACTTCTGGTTGCTTATTGCAGGAAAGGTCTTTTTGATAAGGCGGAATCGGTTGTTAACCAAGCAGTGGTTGGAAGAACTCCATACGCCAGCACGTGGAGCGTGTTAGCCATAGGATATGCAGAATACGGACACATGAGCAAATCCGTTGAGATGTTGAAGAAAGCTATGTTAGTCGGAAGGCAAAATTGGAAACCAAAGCGGCCTGAAATTTTGGAAGCTTGTCTGGATTATTTGGAAAAACAAGGAGATGCAGAAACAATGGAGGAAATAGTACGACTTATGTACTACAGATTGCTGAGAACTTCCATAGCAGGGGGTAAACCAGTTCTTAGCATTCTTGAACAGGATCTAAGACGAACTTGTAGTTGGTAA

Protein sequence

MIRKLRSWNNNLNPNLLIQTPKPQSNSPFCTKTLSLPFSSTPPPQSTIIRHQILTIRDPKISVIPVLEKWVGDGRAIGKPELQYLVYLTKNFRRFNHALEISQWMTDRRYFILSASDAAIRLFLIHRVHGLEHAENYFNSISSQLKTSNVYGALLGSYVREKSVEKAEAIMQEMRKMGIANTSFPYNVLINLYAQIGQHDKIDLMIEEMKMKGIPQDIYSIRNLWIEEDSGLKADWRIYSIAANRYLSAGLETKAISMLKKMEEKLPPYTNKCAFEFLLSLYERTGRKNEVYRVWNTFKPLTIQTHVPYALMIRSLAKLDDIEGAERIFQEWESKCTVYDFRVLNQLLVAYCRKGLFDKAESVVNQAVVGRTPYASTWSVLAIGYAEYGHMSKSVEMLKKAMLVGRQNWKPKRPEILEACLDYLEKQGDAETMEEIVRLMYYRLLRTSIAGGKPVLSILEQDLRRTCSW

Homology

[Close]

BLAST of PI0023458.1 vs. ExPASy Swiss-Prot
Match: Q9SKU6 (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.0e-80
Identity = 163/449 (36.30%), Postives = 255/449 (56.79%), Query Frame = 0


Query: 16  LLIQTPKPQSNSPFCTKTLSLPFSSTPPPQS--TIIRHQILTIRDPKISVIPVLEKWVGD 75
           LL++   P+ N       L     +TP P      ++ ++    DP  S+I VL+ W+  
Sbjct: 5   LLLRLVLPKPNYILRRSFLFHSGKTTPSPLDPYDTLQRRVARSGDPSASIIKVLDGWLDQ 64

Query: 76  GRAIGKPELQYLVYLTKNFRRFNHALEISQWMTDRRYFILSASDAAIRLFLIHRVHGLEH 135
           G  +   EL  ++ + + F RF+HAL+IS WM++ R   +S  D AIRL LI +V GL  
Sbjct: 65  GNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEHRVHEISEGDVAIRLDLIAKVGGLGE 124

Query: 136 AENYFNSISSQLKTSNVYGALLGSYVREKSVEKAEAIMQEMRKMGIANTSFPYNVLINLY 195
           AE +F +I  + +  ++YGALL  Y  +K + KAE + QEM+++G      PYNV++NLY
Sbjct: 125 AEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLY 184

Query: 196 AQIGQHDKIDLMIEEMKMKGIPQDIYSIRN------------------LWIEEDSGLKAD 255
            + G++  ++ ++ EM+ + +  DI+++                    +  E D GL  D
Sbjct: 185 VRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLD 244

Query: 256 WRIYSIAANRYLSAGLETKAISMLKKMEEKLPPYTNKCAFEFLLSLYERTGRKNEVYRVW 315
           WR Y+  AN Y+ AGL  KA+ ML+K E+ +     K A+E L+S Y   G+K EVYR+W
Sbjct: 245 WRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLW 304

Query: 316 NTFKPLTIQTHVPYALMIRSLAKLDDIEGAERIFQEWESKCTVYDFRVLNQLLVAYCRKG 375
           + +K L    +  Y  +I +L K+DDIE  E+I +EWE+  +++D R+ + L+  YC+KG
Sbjct: 305 SLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKG 364

Query: 376 LFDKAESVVNQAV-VGRTPYASTWSVLAIGYAEYGHMSKSVEMLKKAMLVGRQNWKPKRP 435
           + +KAE VVN  V   R    STW  LA+GY   G M K+VE  K+A+ V +  W+P + 
Sbjct: 365 MMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEKWKRAIEVSKPGWRPHQ- 424

Query: 436 EILEACLDYLEKQGDAETMEEIVRLMYYR 444
            +L +C+DYLE Q D E + +I+RL+  R
Sbjct: 425 VVLMSCVDYLEGQRDMEGLRKILRLLSER 452

[Close]

BLAST of PI0023458.1 vs. ExPASy Swiss-Prot
Match: Q8LPS6 (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 247.3 bits (630), Expect = 3.5e-64
Identity = 152/455 (33.41%), Postives = 242/455 (53.19%), Query Frame = 0


Query: 35  SLPFSSTPPPQSTIIRHQILTIRDPKISVIPVLEKWVGDGRAIGKPELQYLVYLTKNFRR 94
           ++ +   P  Q   I  +I  +  P++    VL +W   GR + K EL  +V   + ++R
Sbjct: 55  TVDYERRPIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKR 114

Query: 95  FNHALEISQWMTDR-RYFILSASDAAIRLFLIHRVHGLEHAENYFNSISSQLKTSNVYGA 154
            N ALE+  WM +R   F LSASDAAI+L LI +V G+  AE +F  +    K   VYG+
Sbjct: 115 ANQALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGS 174

Query: 155 LLGSYVREKSVEKAEAIMQEMRKMGIANTSFPYNVLINLYAQIGQHDKIDLMIEEMKMKG 214
           LL +YVR KS EKAEA++  MR  G A    P+NV++ LY  + ++DK+D M+ EMK K 
Sbjct: 175 LLNAYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKD 234

Query: 215 IPQDIYSIRNLWI-------------------EEDSGLKADWRIYSIAANRYLSAGLETK 274
           I  DIYS  N+W+                   + D  +  +W  +S  A  Y+  G   K
Sbjct: 235 IRLDIYSY-NIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEK 294

Query: 275 AISMLKKMEEKLPPYTNKCAFEFLLSLYERTGRKNEVYRVWNTFKPLTIQ-THVPYALMI 334
           A   L+K+E ++    N+  + +LLSLY   G K E+YRVW+ +K +     ++ Y  ++
Sbjct: 295 AEDALRKVEARITG-RNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALV 354

Query: 335 RSLAKLDDIEGAERIFQEWESKCTVYDFRVLNQLLVAYCRKGLFDKAESVVNQAV-VGRT 394
            SL ++ DIEGAE++++EW    + YD R+ N L+ AY +    + AE + +  V +G  
Sbjct: 355 SSLVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGK 414

Query: 395 PYASTWSVLAIGYAEYGHMSKSVEMLKKAMLV-GRQNWKPKRPEILEACLDYLEKQGDAE 454
           P +STW +LA+G+     +S+++  L+ A    G  NW+PK   +L       E++ D  
Sbjct: 415 PSSSTWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPK-VLMLSGFFKLCEEESDVT 474

Query: 455 TMEEIVRLMYYRLLRTSIAGGKPVLSILEQDLRRT 467
           + E ++ L    L ++     K  L++++ D  RT
Sbjct: 475 SKEAVLEL----LRQSGDLEDKSYLALIDVDENRT 502

[Close]

BLAST of PI0023458.1 vs. ExPASy Swiss-Prot
Match: Q84JR3 (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 4.7e-61
Identity = 141/450 (31.33%), Postives = 242/450 (53.78%), Query Frame = 0


Query: 45  QSTIIRHQILTIRDPKISVIPVLEKWVGDGRAIGKPELQYLVYLTKNFRRFNHALEISQW 104
           + T +  +I  + DPK SV P L+ WV  G+ +   EL  +V+  +  +RF HALE+S+W
Sbjct: 23  KKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKW 82

Query: 105 MTDRRYFILSASDAAIRLFLIHRVHGLEHAENYFNSISSQLKTSNVYGALLGSYVREKSV 164
           M +    + S ++ A+ L LI RV+G   AE YF ++  Q K    YGALL  YVR+++V
Sbjct: 83  MNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNV 142

Query: 165 EKAEAIMQEMRKMGIANTSFPYNVLINLYAQIGQHDKIDLMIEEMKMKGIPQDIYSIR-- 224
           EK+    ++M++MG   +S  YN ++ LY  IGQH+K+  ++EEMK + +  D YS R  
Sbjct: 143 EKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRIC 202

Query: 225 -NLW---------------IEEDSGLKADWRIYSIAANRYLSAGLETKAISMLKKMEEKL 284
            N +               +E    +  DW  Y++AA  Y+  G   +A+ +LK  E +L
Sbjct: 203 INAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENRL 262

Query: 285 PPYTNKCAFEFLLSLYERTGRKNEVYRVWNTFKPL-TIQTHVPYALMIRSLAKLDDIEGA 344
                +  +  L++LY R G+K EV R+W+  K +   + +  Y  +++SL K+D +  A
Sbjct: 263 EKKDGE-GYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEA 322

Query: 345 ERIFQEWESKCTVYDFRVLNQLLVAYCRKGLFDKAESVVNQ-AVVGRTPYASTWSVLAIG 404
           E +  EW+S    YDFRV N ++  Y  K + +KAE+++   A  G+     +W ++A  
Sbjct: 323 EEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATA 382

Query: 405 YAEYGHMSKSVEMLKKAM--LVGRQNWKPKRPEILEACLDYLEKQGDAETMEEIV----- 462
           YAE G +  + + +K A+   VG + W+P    ++ + L ++  +G  + +E  V     
Sbjct: 383 YAEKGTLENAFKCMKTALGVEVGSRKWRPGL-TLVTSVLSWVGDEGSLKEVESFVASLRN 442

[Close]

BLAST of PI0023458.1 vs. ExPASy Swiss-Prot
Match: O22714 (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=1 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.1e-53
Identity = 134/429 (31.24%), Postives = 227/429 (52.91%), Query Frame = 0


Query: 60  KISVIPVLEKWVGDGRAIGKPELQYLVYLTKNFRRFNHALEISQWMTDRRYFILSASDAA 119
           ++ V   L +++   + + K E+   +   +N   +  AL++S+ M + R    + SD A
Sbjct: 36  EVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVM-EERGMNKTVSDQA 95

Query: 120 IRLFLIHRVHGLEHAENYFNSISSQLKTSNVYGALLGSYVREKSVEKAEAIMQEMRKMGI 179
           I L L+ +   +   ENYF  +    KT   YG+LL  Y +E   EKAE ++ +M+++ I
Sbjct: 96  IHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNI 155

Query: 180 ANTSFPYNVLINLYAQIGQHDKIDLMIEEMKMKGIPQDIYSIRNLW-------------- 239
             +S  YN L+ LY + G+ +K+  MI+E+K + +  D Y+  N+W              
Sbjct: 156 TPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTY-NVWMRALAATNDISGVE 215

Query: 240 --IEE---DSGLKADWRIYSIAANRYLSAGLETKAISMLKKMEEKLPPYTNKCAFEFLLS 299
             IEE   D  +  DW  YS  A+ Y+ AGL  KA   L+++E K     +  A++FL++
Sbjct: 216 RVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMK-NTQRDFTAYQFLIT 275

Query: 300 LYERTGRKNEVYRVWNTFKPLTIQT-HVPYALMIRSLAKLDDIEGAERIFQEWESKCTVY 359
           LY R G+  EVYR+W + +    +T +V Y  MI+ L KL+D+ GAE +F+EW++ C+ Y
Sbjct: 276 LYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTY 335

Query: 360 DFRVLNQLLVAYCRKGLFDKAESVVNQAV-VGRTPYASTWSVLAIGYAEYGHMSKSVEML 419
           D R++N L+ AY ++GL  KA  +  +A   G    A TW +    Y + G M++++E +
Sbjct: 336 DIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECM 395

Query: 420 KKAMLVGRQN---WKPKRPEILEACLDYLEKQGDAETMEEIVRLM-----------YYRL 454
            KA+ +G+ +   W P  PE + A + Y E++ D    E ++ ++           +  L
Sbjct: 396 SKAVSIGKGDGGKWLPS-PETVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAEIFEPL 455

[Close]

BLAST of PI0023458.1 vs. ExPASy Swiss-Prot
Match: Q3E911 (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX=3702 GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.8e-52
Identity = 136/429 (31.70%), Postives = 221/429 (51.52%), Query Frame = 0


Query: 52  QILTIRDPKISVIPVLEKWVGDGRAIGKPELQYLVYLTKNFRRFNHALEISQWMTDRRYF 111
           +IL    P+ SV  +L++ +  G A+   EL+ +        R++ AL++ +WM +++  
Sbjct: 43  EILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKDI 102

Query: 112 ILSASDAAIRLFLIHRVHGLEHAENYF----NSISSQLKTSNVYGALLGSYVREKSVEKA 171
             S  D A+RL LI + HGL+  E YF    +S  S     + Y  LL +YV+ K V++A
Sbjct: 103 EFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEA 162

Query: 172 EAIMQEMRKMGIANTSFPYNVLINLYAQIGQHDKIDLMIEEMKMKGIPQDIYSIRNLWIE 231
           EA+M+++  +G   T  P+N ++ LY   GQ++K+ +++  MK   IP+++ S  NLW+ 
Sbjct: 163 EALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSY-NLWMN 222

Query: 232 E-------------------DSGLKADWRIYSIAANRYLSAGLETKAISMLKKMEEKLPP 291
                               D  ++  W      AN Y+ +G + KA  +L+   EK+  
Sbjct: 223 ACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLED-AEKMLN 282

Query: 292 YTNKCAFEFLLSLYERTGRKNEVYRVWNTFKPLTIQ-THVPYALMIRSLAKLDDIEGAER 351
            +N+  + FL++LY   G K  V R+W   K +  + + V Y  ++ SL K  D+E AER
Sbjct: 283 RSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAER 342

Query: 352 IFQEWESKCTVYDFRVLNQLLVAYCRKGLFDKAESVVNQAVV-GRTPYASTWSVLAIGYA 411
           +F EWE++C  YD RV N LL AY R G   KAES+    +  G TP   TW +L  G+ 
Sbjct: 343 VFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWV 402

Query: 412 EYGHMSKSVEMLKKA-MLVGRQNWKPKRPEILEACLDYLEKQGDAETMEEIVR------- 446
           +  +M K+++ + +  +L+ R +W+P    I+ A  +Y EK+   E     VR       
Sbjct: 403 KCENMEKAIDAMHQVFVLMRRCHWRPSH-NIVMAIAEYFEKEEKIEEATAYVRDLHRLGL 462

[Close]

BLAST of PI0023458.1 vs. ExPASy TrEMBL
Match: A0A5A7SQP0 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003480 PE=4 SV=1)

HSP 1 Score: 803.9 bits (2075), Expect = 3.6e-229
Identity = 413/489 (84.46%), Postives = 434/489 (88.75%), Query Frame = 0


Query: 1   MIRKLRSWNNNLNPNLLIQTPKPQSNSPFCTKTLSLPFSSTPPPQSTIIRHQILTIRDPK 60
           M+RKLRSWNNNL PNLLIQT KPQSNS FCTKTLSLPFSSTPPPQSTI+R+QI+ IRDPK
Sbjct: 1   MVRKLRSWNNNLIPNLLIQTSKPQSNSLFCTKTLSLPFSSTPPPQSTILRNQIIDIRDPK 60

Query: 61  ISVIPVLEKWVGDGRAIGKPELQYLVYLTKNFRRFNHALEISQWMTDRRYFILSASDAAI 120
           ISVIPVLEKWVGDGRAI KPELQYLVYLTKNFRRFNHALEISQWMTDRRY  LSASDAA+
Sbjct: 61  ISVIPVLEKWVGDGRAIWKPELQYLVYLTKNFRRFNHALEISQWMTDRRYMSLSASDAAL 120

Query: 121 RLFLIHRVHGLEHAENYFNSISSQLKTSNVYGALLGSYVREKSVEKAEAIMQEMRKMGIA 180
           RL LIH VHGLEHAENYFNSIS++LKTSNVYG+LLG YVREKSVEKAEAIMQEMRKMGIA
Sbjct: 121 RLDLIHSVHGLEHAENYFNSISTRLKTSNVYGSLLGCYVREKSVEKAEAIMQEMRKMGIA 180

Query: 181 NTSFPYNVLINLYAQIGQHDKIDLMIEEMKMKGIPQDIYSIRNLW--------------- 240
           NTSF YNVLINLYAQIGQH+KIDL+IEEMKMKGIPQDIYSIRNL                
Sbjct: 181 NTSFAYNVLINLYAQIGQHEKIDLLIEEMKMKGIPQDIYSIRNLCAAYVAKTDISGMEKI 240

Query: 241 ---IEEDSGLKADWRIYSIAANRYLSAGLETKAISMLKKMEEKLPPYTNKCAFEFLLSLY 300
              IEEDS  KADWRIYSIAAN YL+AGLET+A+SML KME+K+ P TNK AFEFLLSLY
Sbjct: 241 LKRIEEDSEFKADWRIYSIAANGYLTAGLETEALSMLNKMEKKIRPNTNKLAFEFLLSLY 300

Query: 301 ERTGRKNEVYRVWNTFKPLTIQTHVPYALMIRSLAKLDDIEGAERIFQEWESKCTVYDFR 360
           ERTG KNEVYRVWNTFKPLT QT VPYALMI SLAKLDD+EGAERIFQEWESKCTVYDFR
Sbjct: 301 ERTGHKNEVYRVWNTFKPLTRQTRVPYALMITSLAKLDDVEGAERIFQEWESKCTVYDFR 360

Query: 361 VLNQLLVAYCRKGLFDKAESVVNQAVVGRTPYASTWSVLAIGYAEYGHMSKSVEMLKKAM 420
           VLN+LLVAYCRKGL DKAE VVNQAVVGRTP+ASTWS+LA GYAEYGHMSK+VEMLKKAM
Sbjct: 361 VLNRLLVAYCRKGLLDKAEWVVNQAVVGRTPFASTWSLLATGYAEYGHMSKAVEMLKKAM 420

Query: 421 LVGRQNWKPKRPEILEACLDYLEKQGDAETMEEIVRL----------MYYRLLRTSIAGG 462
           LVGRQNWKPKR +ILEACLDYLEKQGDAETMEEIVRL          MYYRLLRTSIAGG
Sbjct: 421 LVGRQNWKPKRRDILEACLDYLEKQGDAETMEEIVRLCKSSGTVAKEMYYRLLRTSIAGG 480

[Close]

BLAST of PI0023458.1 vs. ExPASy TrEMBL
Match: A0A1S4E0D2 (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC107990314 PE=4 SV=1)

HSP 1 Score: 800.4 bits (2066), Expect = 3.9e-228
Identity = 413/489 (84.46%), Postives = 433/489 (88.55%), Query Frame = 0


Query: 1   MIRKLRSWNNNLNPNLLIQTPKPQSNSPFCTKTLSLPFSSTPPPQSTIIRHQILTIRDPK 60
           M+RKLRSWNNNL PNLLIQT KPQSNS FCTKTLSLPFSSTPPPQSTI+R+QI+ IRDPK
Sbjct: 1   MVRKLRSWNNNLIPNLLIQTFKPQSNSFFCTKTLSLPFSSTPPPQSTILRNQIIDIRDPK 60

Query: 61  ISVIPVLEKWVGDGRAIGKPELQYLVYLTKNFRRFNHALEISQWMTDRRYFILSASDAAI 120
           ISVIPVLEKWVGDGRAI KPELQYLVYLTKNFRRFNHALEISQWMTDRRY  LSASDAA+
Sbjct: 61  ISVIPVLEKWVGDGRAIWKPELQYLVYLTKNFRRFNHALEISQWMTDRRYLSLSASDAAL 120

Query: 121 RLFLIHRVHGLEHAENYFNSISSQLKTSNVYGALLGSYVREKSVEKAEAIMQEMRKMGIA 180
           RL LIH VHGLEHAENYFNSIS++LKTSNVYG+LL  YVREKSVEKAEAIMQEMRKMGIA
Sbjct: 121 RLDLIHSVHGLEHAENYFNSISTRLKTSNVYGSLLSCYVREKSVEKAEAIMQEMRKMGIA 180

Query: 181 NTSFPYNVLINLYAQIGQHDKIDLMIEEMKMKGIPQDIYSIRNLW--------------- 240
           NTSF YNVLINLYAQIGQH+KIDL+IEEMKMKGIPQDIYSIRNL                
Sbjct: 181 NTSFAYNVLINLYAQIGQHEKIDLLIEEMKMKGIPQDIYSIRNLCAAYVAKTDISGMEKI 240

Query: 241 ---IEEDSGLKADWRIYSIAANRYLSAGLETKAISMLKKMEEKLPPYTNKCAFEFLLSLY 300
              IEEDS  KADWRIYSIAAN YL+AGLET+A+SML KME+K+ P TNK AFEFLLSLY
Sbjct: 241 LKRIEEDSEFKADWRIYSIAANGYLTAGLETEALSMLNKMEKKIRPNTNKLAFEFLLSLY 300

Query: 301 ERTGRKNEVYRVWNTFKPLTIQTHVPYALMIRSLAKLDDIEGAERIFQEWESKCTVYDFR 360
           ERTG KNEVYRVWNTFKPLT QT VPYALMI SLAKLDDIEGAERIFQEWESKCTVYDFR
Sbjct: 301 ERTGHKNEVYRVWNTFKPLTRQTRVPYALMITSLAKLDDIEGAERIFQEWESKCTVYDFR 360

Query: 361 VLNQLLVAYCRKGLFDKAESVVNQAVVGRTPYASTWSVLAIGYAEYGHMSKSVEMLKKAM 420
           VLN+LLVAYCRKGL DKAE VVNQAVVGRTP+ASTWS+LA GYAEYGHMSK+VEMLKKAM
Sbjct: 361 VLNRLLVAYCRKGLLDKAEWVVNQAVVGRTPFASTWSLLATGYAEYGHMSKAVEMLKKAM 420

Query: 421 LVGRQNWKPKRPEILEACLDYLEKQGDAETMEEIVRL----------MYYRLLRTSIAGG 462
           LVGRQNWKPKR +ILEACLDYLEKQGDAETMEEIVRL          MYYRLLRTSIAGG
Sbjct: 421 LVGRQNWKPKRRDILEACLDYLEKQGDAETMEEIVRLCKSSGTVAKEMYYRLLRTSIAGG 480

[Close]

BLAST of PI0023458.1 vs. ExPASy TrEMBL
Match: A0A6J1GLA8 (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111455369 PE=4 SV=1)

HSP 1 Score: 682.6 bits (1760), Expect = 1.2e-192
Identity = 361/493 (73.23%), Postives = 406/493 (82.35%), Query Frame = 0


Query: 1   MIRKLRSWNNNLNPNLLIQTPKPQSNSP----FCTKTLSLPFSSTPPPQSTIIRHQILTI 60
           M+ KLRSWN  + PNLL    +PQ + P    FCTK+ S  FSSTPPP S  +  +ILTI
Sbjct: 1   MMMKLRSWNKPI-PNLL---QRPQRSMPLPCLFCTKSPSPLFSSTPPPTSPALLDKILTI 60

Query: 61  RDPKISVIPVLEKWVGDGRAIGKPELQYLVYLTKNFRRFNHALEISQWMTDRRYFILSAS 120
           RDPKISVIPVLEKWVGDGRAIGK ELQ LV L K+FRRFNHALEIS+WMTDRRYF LS+S
Sbjct: 61  RDPKISVIPVLEKWVGDGRAIGKQELQSLVRLMKSFRRFNHALEISRWMTDRRYFNLSSS 120

Query: 121 DAAIRLFLIHRVHGLEHAENYFNSISSQLKTSNVYGALLGSYVREKSVEKAEAIMQEMRK 180
           DAA+RL LI  VHGLEHAE+YFNSISSQL+TSN YGALL SYVRE+SVEKAEAIMQEMR 
Sbjct: 121 DAAMRLDLIRIVHGLEHAEHYFNSISSQLRTSNAYGALLCSYVRERSVEKAEAIMQEMRN 180

Query: 181 MGIANTSFPYNVLINLYAQIGQHDKIDLMIEEMKMKGIPQDIYSIRNL------------ 240
           +G A TSFPYNVLINLYAQ+GQH KIDL+I+EM+MKGIPQDIY++RNL            
Sbjct: 181 LGFATTSFPYNVLINLYAQVGQHHKIDLLIQEMEMKGIPQDIYTVRNLSAAYVANADISG 240

Query: 241 ------WIEEDSGLKADWRIYSIAANRYLSAGLETKAISMLKKMEEKLPPYTNKCAFEFL 300
                  IEE+S  +ADWRIYSIAA+ YLSAGLET+A+SMLKKMEEK+PP  NK AFEFL
Sbjct: 241 MEKILKRIEENSEFRADWRIYSIAASGYLSAGLETEALSMLKKMEEKIPPRKNKSAFEFL 300

Query: 301 LSLYERTGRKNEVYRVWNTFKPLTIQTHVPYALMIRSLAKLDDIEGAERIFQEWESKCTV 360
           LSLYER GRK+E+YRVW+TFK    Q  VPYALMI SL KLDDIEGAERIFQEWESKCT 
Sbjct: 301 LSLYERAGRKDELYRVWSTFKSTIKQIDVPYALMITSLVKLDDIEGAERIFQEWESKCTF 360

Query: 361 YDFRVLNQLLVAYCRKGLFDKAESVVNQAVVGRTPYASTWSVLAIGYAEYGHMSKSVEML 420
           YDFRVLN+LLVAYCRKGLFDKAES+VN+AV+GRTPYASTWSVLA+GY E+G MSK+VEML
Sbjct: 361 YDFRVLNRLLVAYCRKGLFDKAESLVNRAVMGRTPYASTWSVLAMGYVEHGLMSKAVEML 420

Query: 421 KKAMLVGRQNWKPKRPEILEACLDYLEKQGDAETMEEIVRL----------MYYRLLRTS 462
           K+AMLVGRQ+WKP + +ILEACL+YLE+QGDAETMEE++RL          MYYR LRTS
Sbjct: 421 KRAMLVGRQDWKPNQ-DILEACLNYLEEQGDAETMEEMIRLCRSSGSITKEMYYRSLRTS 480

[Close]

BLAST of PI0023458.1 vs. ExPASy TrEMBL
Match: A0A6J1HYW6 (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111468172 PE=4 SV=1)

HSP 1 Score: 681.8 bits (1758), Expect = 2.0e-192
Identity = 361/491 (73.52%), Postives = 406/491 (82.69%), Query Frame = 0


Query: 1   MIRKLRSWNNNLNPNLLIQTPKPQSNSP--FCTKTLSLPFSSTPPPQSTIIRHQILTIRD 60
           M+ KLRSWN  + PNLL Q+P+     P  FC K+ S  FSSTPPP S  +  +ILTIRD
Sbjct: 1   MMMKLRSWNKPI-PNLL-QSPQRSMPLPCLFCIKSPSPLFSSTPPPTSPALLDKILTIRD 60

Query: 61  PKISVIPVLEKWVGDGRAIGKPELQYLVYLTKNFRRFNHALEISQWMTDRRYFILSASDA 120
           PKISVIPVLEKWVGDGRAIGK ELQ LV L K+FRRFNHALEIS+WMTDRRYF LS+SDA
Sbjct: 61  PKISVIPVLEKWVGDGRAIGKQELQSLVRLMKSFRRFNHALEISRWMTDRRYFNLSSSDA 120

Query: 121 AIRLFLIHRVHGLEHAENYFNSISSQLKTSNVYGALLGSYVREKSVEKAEAIMQEMRKMG 180
           A+RL LI  VHGLEHAE+YFNSISSQL+TSN YGALL SYVRE+SVEKAEAIMQEMRK+G
Sbjct: 121 AMRLDLIRIVHGLEHAEHYFNSISSQLRTSNAYGALLCSYVRERSVEKAEAIMQEMRKLG 180

Query: 181 IANTSFPYNVLINLYAQIGQHDKIDLMIEEMKMKGIPQDIYSIRNL-------------- 240
            A TSFPYNVLINLYAQ+GQH KIDL+I+EM+MKGIPQDIY++RNL              
Sbjct: 181 FATTSFPYNVLINLYAQVGQHHKIDLLIQEMEMKGIPQDIYTVRNLSAAYVANADISGME 240

Query: 241 ----WIEEDSGLKADWRIYSIAANRYLSAGLETKAISMLKKMEEKLPPYTNKCAFEFLLS 300
                IEE+S  +ADWRIYSIAA+ YLSAGLET+A+SMLKKMEEK+PP  NK AFEFLLS
Sbjct: 241 KILKRIEENSEFRADWRIYSIAASGYLSAGLETEALSMLKKMEEKIPPRKNKSAFEFLLS 300

Query: 301 LYERTGRKNEVYRVWNTFKPLTIQTHVPYALMIRSLAKLDDIEGAERIFQEWESKCTVYD 360
           LYERTGRK+E+YRVW+TFK    Q  VPYALMI SL KLDDIEGAERIFQEWESKCT YD
Sbjct: 301 LYERTGRKDELYRVWSTFKSSIKQIDVPYALMITSLVKLDDIEGAERIFQEWESKCTFYD 360

Query: 361 FRVLNQLLVAYCRKGLFDKAESVVNQAVVGRTPYASTWSVLAIGYAEYGHMSKSVEMLKK 420
           FRVLN+LLVAYCRKGLFDKAES+VN+AV+GRTPYASTWSVLA+GY E+G MSK+VEMLK+
Sbjct: 361 FRVLNRLLVAYCRKGLFDKAESLVNRAVMGRTPYASTWSVLAMGYVEHGLMSKAVEMLKR 420

Query: 421 AMLVGRQNWKPKRPEILEACLDYLEKQGDAETMEEIVRL----------MYYRLLRTSIA 462
           AMLVGRQ+WKP + +ILEACL+YLE+QGD ETMEE++RL          MYYR LRTSIA
Sbjct: 421 AMLVGRQDWKPNQ-DILEACLNYLEEQGDGETMEEMIRLCRSSGTVTKEMYYRSLRTSIA 480

[Close]

BLAST of PI0023458.1 vs. ExPASy TrEMBL
Match: A0A6J1D1R6 (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111016808 PE=4 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 1.2e-179
Identity = 340/489 (69.53%), Postives = 393/489 (80.37%), Query Frame = 0


Query: 4   KLRSWNNNLNPNLLIQTPKPQS---NSPFCTKTLSLPFSSTPPPQSTIIRHQILTIRDPK 63
           KL +W N L  NLL  + +  S    S FCT++LS  FSS  P  S+++  +IL +RDPK
Sbjct: 3   KLLNW-NKLFTNLLRSSQQSNSMAFASLFCTESLSPRFSSASPTPSSLL-DKILAVRDPK 62

Query: 64  ISVIPVLEKWVGDGRAIGKPELQYLVYLTKNFRRFNHALEISQWMTDRRYFILSASDAAI 123
           IS +PVLEKWVGDG A GK ELQ LV L K+FRRFNHAL+ISQWMTDRRYF LS+SD A+
Sbjct: 63  ISAVPVLEKWVGDGGAXGKQELQSLVRLMKSFRRFNHALQISQWMTDRRYFSLSSSDVAM 122

Query: 124 RLFLIHRVHGLEHAENYFNSISSQLKTSNVYGALLGSYVREKSVEKAEAIMQEMRKMGIA 183
           RL LI RVHGLEHAE+YFNSISS+LK SN YGALL SYVRE SVEKAEAIMQEMR+MGIA
Sbjct: 123 RLDLIRRVHGLEHAEHYFNSISSRLKASNTYGALLCSYVREGSVEKAEAIMQEMRQMGIA 182

Query: 184 NTSFPYNVLINLYAQIGQHDKIDLMIEEMKMKGIPQDIYSIRNLW--------------- 243
            ++FPYNVLINLYAQIGQHDKIDL+I+EM+ KGI +DIY++RNL                
Sbjct: 183 TSTFPYNVLINLYAQIGQHDKIDLLIQEMETKGIAEDIYTVRNLCAAYVSKSDISGMEKI 242

Query: 244 ---IEEDSGLKADWRIYSIAANRYLSAGLETKAISMLKKMEEKLPPYTNKCAFEFLLSLY 303
              IEEDS   ADWR+YSIAA+ YLSAGLET+A+SMLKKMEE++PPY NK AFEFLLSLY
Sbjct: 243 LKRIEEDSQFNADWRVYSIAASGYLSAGLETEALSMLKKMEERIPPYQNKSAFEFLLSLY 302

Query: 304 ERTGRKNEVYRVWNTFKPLTIQTHVPYALMIRSLAKLDDIEGAERIFQEWESKCTVYDFR 363
           ERTGRK+ +YRVW+TFKP   Q  VPYALMI SLAKLDD+EGAERIFQEWES+ T YDFR
Sbjct: 303 ERTGRKDXLYRVWSTFKPSIRQMDVPYALMITSLAKLDDVEGAERIFQEWESQXTGYDFR 362

Query: 364 VLNQLLVAYCRKGLFDKAESVVNQAVVGRTPYASTWSVLAIGYAEYGHMSKSVEMLKKAM 423
           VLN+LLVAYCRKGLFDKAE  VN+AVVGRTPYASTWSVLA+GYAE+  MSK+VEMLKKAM
Sbjct: 363 VLNRLLVAYCRKGLFDKAELAVNRAVVGRTPYASTWSVLAMGYAEHRLMSKAVEMLKKAM 422

Query: 424 LVGRQNWKPKRPEILEACLDYLEKQGDAETMEEIVRL----------MYYRLLRTSIAGG 462
           LVGRQ+WKP   + LE+CL+YLE++GDAETMEE+++L           YYRLLRTSIA G
Sbjct: 423 LVGRQDWKPNL-DTLESCLEYLEERGDAETMEELIQLCKSSGTITKETYYRLLRTSIACG 482

[Close]

BLAST of PI0023458.1 vs. NCBI nr
Match: KAA0031579.1 (putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK07031.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 803.9 bits (2075), Expect = 7.3e-229
Identity = 413/489 (84.46%), Postives = 434/489 (88.75%), Query Frame = 0


Query: 1   MIRKLRSWNNNLNPNLLIQTPKPQSNSPFCTKTLSLPFSSTPPPQSTIIRHQILTIRDPK 60
           M+RKLRSWNNNL PNLLIQT KPQSNS FCTKTLSLPFSSTPPPQSTI+R+QI+ IRDPK
Sbjct: 1   MVRKLRSWNNNLIPNLLIQTSKPQSNSLFCTKTLSLPFSSTPPPQSTILRNQIIDIRDPK 60

Query: 61  ISVIPVLEKWVGDGRAIGKPELQYLVYLTKNFRRFNHALEISQWMTDRRYFILSASDAAI 120
           ISVIPVLEKWVGDGRAI KPELQYLVYLTKNFRRFNHALEISQWMTDRRY  LSASDAA+
Sbjct: 61  ISVIPVLEKWVGDGRAIWKPELQYLVYLTKNFRRFNHALEISQWMTDRRYMSLSASDAAL 120

Query: 121 RLFLIHRVHGLEHAENYFNSISSQLKTSNVYGALLGSYVREKSVEKAEAIMQEMRKMGIA 180
           RL LIH VHGLEHAENYFNSIS++LKTSNVYG+LLG YVREKSVEKAEAIMQEMRKMGIA
Sbjct: 121 RLDLIHSVHGLEHAENYFNSISTRLKTSNVYGSLLGCYVREKSVEKAEAIMQEMRKMGIA 180

Query: 181 NTSFPYNVLINLYAQIGQHDKIDLMIEEMKMKGIPQDIYSIRNLW--------------- 240
           NTSF YNVLINLYAQIGQH+KIDL+IEEMKMKGIPQDIYSIRNL                
Sbjct: 181 NTSFAYNVLINLYAQIGQHEKIDLLIEEMKMKGIPQDIYSIRNLCAAYVAKTDISGMEKI 240

Query: 241 ---IEEDSGLKADWRIYSIAANRYLSAGLETKAISMLKKMEEKLPPYTNKCAFEFLLSLY 300
              IEEDS  KADWRIYSIAAN YL+AGLET+A+SML KME+K+ P TNK AFEFLLSLY
Sbjct: 241 LKRIEEDSEFKADWRIYSIAANGYLTAGLETEALSMLNKMEKKIRPNTNKLAFEFLLSLY 300

Query: 301 ERTGRKNEVYRVWNTFKPLTIQTHVPYALMIRSLAKLDDIEGAERIFQEWESKCTVYDFR 360
           ERTG KNEVYRVWNTFKPLT QT VPYALMI SLAKLDD+EGAERIFQEWESKCTVYDFR
Sbjct: 301 ERTGHKNEVYRVWNTFKPLTRQTRVPYALMITSLAKLDDVEGAERIFQEWESKCTVYDFR 360

Query: 361 VLNQLLVAYCRKGLFDKAESVVNQAVVGRTPYASTWSVLAIGYAEYGHMSKSVEMLKKAM 420
           VLN+LLVAYCRKGL DKAE VVNQAVVGRTP+ASTWS+LA GYAEYGHMSK+VEMLKKAM
Sbjct: 361 VLNRLLVAYCRKGLLDKAEWVVNQAVVGRTPFASTWSLLATGYAEYGHMSKAVEMLKKAM 420

Query: 421 LVGRQNWKPKRPEILEACLDYLEKQGDAETMEEIVRL----------MYYRLLRTSIAGG 462
           LVGRQNWKPKR +ILEACLDYLEKQGDAETMEEIVRL          MYYRLLRTSIAGG
Sbjct: 421 LVGRQNWKPKRRDILEACLDYLEKQGDAETMEEIVRLCKSSGTVAKEMYYRLLRTSIAGG 480

[Close]

BLAST of PI0023458.1 vs. NCBI nr
Match: XP_016901686.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis melo])

HSP 1 Score: 800.4 bits (2066), Expect = 8.1e-228
Identity = 413/489 (84.46%), Postives = 433/489 (88.55%), Query Frame = 0


Query: 1   MIRKLRSWNNNLNPNLLIQTPKPQSNSPFCTKTLSLPFSSTPPPQSTIIRHQILTIRDPK 60
           M+RKLRSWNNNL PNLLIQT KPQSNS FCTKTLSLPFSSTPPPQSTI+R+QI+ IRDPK
Sbjct: 1   MVRKLRSWNNNLIPNLLIQTFKPQSNSFFCTKTLSLPFSSTPPPQSTILRNQIIDIRDPK 60

Query: 61  ISVIPVLEKWVGDGRAIGKPELQYLVYLTKNFRRFNHALEISQWMTDRRYFILSASDAAI 120
           ISVIPVLEKWVGDGRAI KPELQYLVYLTKNFRRFNHALEISQWMTDRRY  LSASDAA+
Sbjct: 61  ISVIPVLEKWVGDGRAIWKPELQYLVYLTKNFRRFNHALEISQWMTDRRYLSLSASDAAL 120

Query: 121 RLFLIHRVHGLEHAENYFNSISSQLKTSNVYGALLGSYVREKSVEKAEAIMQEMRKMGIA 180
           RL LIH VHGLEHAENYFNSIS++LKTSNVYG+LL  YVREKSVEKAEAIMQEMRKMGIA
Sbjct: 121 RLDLIHSVHGLEHAENYFNSISTRLKTSNVYGSLLSCYVREKSVEKAEAIMQEMRKMGIA 180

Query: 181 NTSFPYNVLINLYAQIGQHDKIDLMIEEMKMKGIPQDIYSIRNLW--------------- 240
           NTSF YNVLINLYAQIGQH+KIDL+IEEMKMKGIPQDIYSIRNL                
Sbjct: 181 NTSFAYNVLINLYAQIGQHEKIDLLIEEMKMKGIPQDIYSIRNLCAAYVAKTDISGMEKI 240

Query: 241 ---IEEDSGLKADWRIYSIAANRYLSAGLETKAISMLKKMEEKLPPYTNKCAFEFLLSLY 300
              IEEDS  KADWRIYSIAAN YL+AGLET+A+SML KME+K+ P TNK AFEFLLSLY
Sbjct: 241 LKRIEEDSEFKADWRIYSIAANGYLTAGLETEALSMLNKMEKKIRPNTNKLAFEFLLSLY 300

Query: 301 ERTGRKNEVYRVWNTFKPLTIQTHVPYALMIRSLAKLDDIEGAERIFQEWESKCTVYDFR 360
           ERTG KNEVYRVWNTFKPLT QT VPYALMI SLAKLDDIEGAERIFQEWESKCTVYDFR
Sbjct: 301 ERTGHKNEVYRVWNTFKPLTRQTRVPYALMITSLAKLDDIEGAERIFQEWESKCTVYDFR 360

Query: 361 VLNQLLVAYCRKGLFDKAESVVNQAVVGRTPYASTWSVLAIGYAEYGHMSKSVEMLKKAM 420
           VLN+LLVAYCRKGL DKAE VVNQAVVGRTP+ASTWS+LA GYAEYGHMSK+VEMLKKAM
Sbjct: 361 VLNRLLVAYCRKGLLDKAEWVVNQAVVGRTPFASTWSLLATGYAEYGHMSKAVEMLKKAM 420

Query: 421 LVGRQNWKPKRPEILEACLDYLEKQGDAETMEEIVRL----------MYYRLLRTSIAGG 462
           LVGRQNWKPKR +ILEACLDYLEKQGDAETMEEIVRL          MYYRLLRTSIAGG
Sbjct: 421 LVGRQNWKPKRRDILEACLDYLEKQGDAETMEEIVRLCKSSGTVAKEMYYRLLRTSIAGG 480

[Close]

BLAST of PI0023458.1 vs. NCBI nr
Match: XP_031744657.1 (pentatricopeptide repeat-containing protein At5g12100, mitochondrial [Cucumis sativus])

HSP 1 Score: 737.3 bits (1902), Expect = 8.4e-209
Identity = 388/489 (79.35%), Postives = 414/489 (84.66%), Query Frame = 0


Query: 1   MIRKLRSWNNNLNPNLLIQTPKPQSNSPFCTKTLSLPFSSTPPPQSTIIRHQILTIRDPK 60
           MIRKLRSWNNNL  NLLIQT          +KTLSLPFSST PPQ  I+R +I+ IR PK
Sbjct: 1   MIRKLRSWNNNLISNLLIQT----------SKTLSLPFSST-PPQLAILRQKIVNIRAPK 60

Query: 61  ISVIPVLEKWVGDGRAIGKPELQYLVYLTKNFRRFNHALEISQWMTDRRYFILSASDAAI 120
           ISV+PVLEKWVGDGRAIGKPELQYLV+L K+ RRFNHALEISQWMTDRRY  LS SDAA+
Sbjct: 61  ISVVPVLEKWVGDGRAIGKPELQYLVHLMKDSRRFNHALEISQWMTDRRYLSLSPSDAAV 120

Query: 121 RLFLIHRVHGLEHAENYFNSISSQLKTSNVYGALLGSYVREKSVEKAEAIMQEMRKMGIA 180
           RL LIH VHGLEHAENYFNSIS +LKTSNVYGALLG YVREKS+EKAEAIMQEMRKMGIA
Sbjct: 121 RLDLIHSVHGLEHAENYFNSISIRLKTSNVYGALLGCYVREKSLEKAEAIMQEMRKMGIA 180

Query: 181 NTSFPYNVLINLYAQIGQHDKIDLMIEEMKMKGIPQDIYSIRNLW--------------- 240
            TSF YNVLINLYAQIGQHDKIDL+IEEMK KGIPQDIYSIRNL                
Sbjct: 181 TTSFAYNVLINLYAQIGQHDKIDLLIEEMKTKGIPQDIYSIRNLCAAYVAKADISGMEKI 240

Query: 241 ---IEEDSGLKADWRIYSIAANRYLSAGLETKAISMLKKMEEKLPPYTNKCAFEFLLSLY 300
              IEEDS LKADW IYSIAAN YL+AGLET+A+SMLKK EEK+ P TNK AF+FLLSLY
Sbjct: 241 LKRIEEDSELKADWTIYSIAANGYLTAGLETEALSMLKKTEEKVRPNTNKFAFKFLLSLY 300

Query: 301 ERTGRKNEVYRVWNTFKPLTIQTHVPYALMIRSLAKLDDIEGAERIFQEWESKCTVYDFR 360
           ERTG KNEVYRVWNTFKPLT +T VPYALMI SLAKLDDIEGAERIFQEWESKCTVYDFR
Sbjct: 301 ERTGHKNEVYRVWNTFKPLTKETCVPYALMITSLAKLDDIEGAERIFQEWESKCTVYDFR 360

Query: 361 VLNQLLVAYCRKGLFDKAESVVNQAVVGRTPYASTWSVLAIGYAEYGHMSKSVEMLKKAM 420
           VLN+LLVAYCRKGL DKAESVVNQAVV RTP+ STWS+LA GYAEYGHMSK+VEMLKKA+
Sbjct: 361 VLNRLLVAYCRKGLLDKAESVVNQAVVERTPFRSTWSILATGYAEYGHMSKAVEMLKKAI 420

Query: 421 LVGRQNWKPKRPEILEACLDYLEKQGDAETMEEIVRL----------MYYRLLRTSIAGG 462
           LVGRQNWKPK+ +ILEACLDYLEKQGDAETM+EIVRL          MYYRLLRTSIAGG
Sbjct: 421 LVGRQNWKPKQGDILEACLDYLEKQGDAETMDEIVRLCKSSGTVMKEMYYRLLRTSIAGG 478

[Close]

BLAST of PI0023458.1 vs. NCBI nr
Match: KAE8645769.1 (hypothetical protein Csa_020441 [Cucumis sativus])

HSP 1 Score: 737.3 bits (1902), Expect = 8.4e-209
Identity = 388/489 (79.35%), Postives = 414/489 (84.66%), Query Frame = 0


Query: 1   MIRKLRSWNNNLNPNLLIQTPKPQSNSPFCTKTLSLPFSSTPPPQSTIIRHQILTIRDPK 60
           MIRKLRSWNNNL  NLLIQT          +KTLSLPFSST PPQ  I+R +I+ IR PK
Sbjct: 1   MIRKLRSWNNNLISNLLIQT----------SKTLSLPFSST-PPQLAILRQKIVNIRAPK 60

Query: 61  ISVIPVLEKWVGDGRAIGKPELQYLVYLTKNFRRFNHALEISQWMTDRRYFILSASDAAI 120
           ISV+PVLEKWVGDGRAIGKPELQYLV+L K+ RRFNHALEISQWMTDRRY  LS SDAA+
Sbjct: 61  ISVVPVLEKWVGDGRAIGKPELQYLVHLMKDSRRFNHALEISQWMTDRRYLSLSPSDAAV 120

Query: 121 RLFLIHRVHGLEHAENYFNSISSQLKTSNVYGALLGSYVREKSVEKAEAIMQEMRKMGIA 180
           RL LIH VHGLEHAENYFNSIS +LKTSNVYGALLG YVREKS+EKAEAIMQEMRKMGIA
Sbjct: 121 RLDLIHSVHGLEHAENYFNSISIRLKTSNVYGALLGCYVREKSLEKAEAIMQEMRKMGIA 180

Query: 181 NTSFPYNVLINLYAQIGQHDKIDLMIEEMKMKGIPQDIYSIRNLW--------------- 240
            TSF YNVLINLYAQIGQHDKIDL+IEEMK KGIPQDIYSIRNL                
Sbjct: 181 TTSFAYNVLINLYAQIGQHDKIDLLIEEMKTKGIPQDIYSIRNLCAAYVAKADISGMEKI 240

Query: 241 ---IEEDSGLKADWRIYSIAANRYLSAGLETKAISMLKKMEEKLPPYTNKCAFEFLLSLY 300
              IEEDS LKADW IYSIAAN YL+AGLET+A+SMLKK EEK+ P TNK AF+FLLSLY
Sbjct: 241 LKRIEEDSELKADWTIYSIAANGYLTAGLETEALSMLKKTEEKVRPNTNKFAFKFLLSLY 300

Query: 301 ERTGRKNEVYRVWNTFKPLTIQTHVPYALMIRSLAKLDDIEGAERIFQEWESKCTVYDFR 360
           ERTG KNEVYRVWNTFKPLT +T VPYALMI SLAKLDDIEGAERIFQEWESKCTVYDFR
Sbjct: 301 ERTGHKNEVYRVWNTFKPLTKETCVPYALMITSLAKLDDIEGAERIFQEWESKCTVYDFR 360

Query: 361 VLNQLLVAYCRKGLFDKAESVVNQAVVGRTPYASTWSVLAIGYAEYGHMSKSVEMLKKAM 420
           VLN+LLVAYCRKGL DKAESVVNQAVV RTP+ STWS+LA GYAEYGHMSK+VEMLKKA+
Sbjct: 361 VLNRLLVAYCRKGLLDKAESVVNQAVVERTPFRSTWSILATGYAEYGHMSKAVEMLKKAI 420

Query: 421 LVGRQNWKPKRPEILEACLDYLEKQGDAETMEEIVRL----------MYYRLLRTSIAGG 462
           LVGRQNWKPK+ +ILEACLDYLEKQGDAETM+EIVRL          MYYRLLRTSIAGG
Sbjct: 421 LVGRQNWKPKQGDILEACLDYLEKQGDAETMDEIVRLCKSSGTVMKEMYYRLLRTSIAGG 478

[Close]

BLAST of PI0023458.1 vs. NCBI nr
Match: XP_038888307.1 (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like isoform X1 [Benincasa hispida] >XP_038888308.1 pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like isoform X1 [Benincasa hispida])

HSP 1 Score: 721.8 bits (1862), Expect = 3.7e-204
Identity = 391/492 (79.47%), Postives = 417/492 (84.76%), Query Frame = 0


Query: 1   MIRKLRSWNNNLNPNLLIQTPKPQSN---SPFCTKT-LSLPFSSTPPPQSTIIRHQILTI 60
           MI KLRSW NNL PN L QTP+ QSN   S FCTKT +S PFSSTPPP ST +  +ILTI
Sbjct: 2   MITKLRSW-NNLVPN-LHQTPQ-QSNPLASFFCTKTQISPPFSSTPPPSSTTLPDKILTI 61

Query: 61  RDPKISVIPVLEKWVGDGRAIGKPELQYLVYLTKNFRRFNHALEISQWMTDRRYFILSAS 120
           RDPKISVIPVLEKWVGDG AIG  ELQ LVYL KNFRRFNHAL+ISQW+TDRRYF LS S
Sbjct: 62  RDPKISVIPVLEKWVGDGGAIGIRELQSLVYLMKNFRRFNHALQISQWITDRRYFSLSPS 121

Query: 121 DAAIRLFLIHRVHGLEHAENYFNSISSQLKTSNVYGALLGSYVREKSVEKAEAIMQEMRK 180
           DAAIR+ LIHRVHGLEHAENYFNSISSQLKTSNVYGALL SYVREKSVEKAEAIMQEMRK
Sbjct: 122 DAAIRMDLIHRVHGLEHAENYFNSISSQLKTSNVYGALLCSYVREKSVEKAEAIMQEMRK 181

Query: 181 MGIANTSFPYNVLINLYAQIGQHDKIDLMIEEMKMKGIPQDIYSIRNLWIE--------- 240
           MGIANTSFPYNVLINLYAQIGQHDKIDL+ +EMKMKGIPQDIY+IRNL            
Sbjct: 182 MGIANTSFPYNVLINLYAQIGQHDKIDLLTQEMKMKGIPQDIYTIRNLCAAYVAKTDIFG 241

Query: 241 --------EDSGLKADWRIYSIAANRYLSAGLETKAISMLKKMEEKLPPYTNKCAFEFLL 300
                   E S LKADWRIYSIAA+ YLSAGLETKA+SMLKKMEEK+P   NK AFEFLL
Sbjct: 242 LEKILKRIEGSELKADWRIYSIAASGYLSAGLETKALSMLKKMEEKIPSNNNKSAFEFLL 301

Query: 301 SLYERTGRKNEVYRVWNTFKPLTIQTHVPYALMIRSLAKLDDIEGAERIFQEWESKCTVY 360
           +LYERTGRK+E+YRVW+TFKPL  QT VPYALMI SL KLDDIEGAERIFQEWESKCT Y
Sbjct: 302 ALYERTGRKDELYRVWSTFKPLIRQTLVPYALMITSLVKLDDIEGAERIFQEWESKCTEY 361

Query: 361 DFRVLNQLLVAYCRKGLFDKAESVVNQAVVGRTPYASTWSVLAIGYAEYGHMSKSVEMLK 420
           DFRVLN+LLVAYCRKGL DKAESVVNQAVVGRTPYASTWSVLA GYAE+G MSK+VEMLK
Sbjct: 362 DFRVLNRLLVAYCRKGLLDKAESVVNQAVVGRTPYASTWSVLATGYAEHGCMSKAVEMLK 421

Query: 421 KAMLVGRQNWKPKRPEILEACLDYLEKQGDAETMEEIVRL----------MYYRLLRTSI 462
           KAMLVGRQ+W+PK  +ILEACLDYLE+QGDAETMEEI+RL          +YYRLLRTSI
Sbjct: 422 KAMLVGRQDWRPK-CDILEACLDYLEEQGDAETMEEIIRLCKSSGMVAKELYYRLLRTSI 481

[Close]

BLAST of PI0023458.1 vs. TAIR 10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 301.2 bits (770), Expect = 1.4e-81
Identity = 163/449 (36.30%), Postives = 255/449 (56.79%), Query Frame = 0


Query: 16  LLIQTPKPQSNSPFCTKTLSLPFSSTPPPQS--TIIRHQILTIRDPKISVIPVLEKWVGD 75
           LL++   P+ N       L     +TP P      ++ ++    DP  S+I VL+ W+  
Sbjct: 5   LLLRLVLPKPNYILRRSFLFHSGKTTPSPLDPYDTLQRRVARSGDPSASIIKVLDGWLDQ 64

Query: 76  GRAIGKPELQYLVYLTKNFRRFNHALEISQWMTDRRYFILSASDAAIRLFLIHRVHGLEH 135
           G  +   EL  ++ + + F RF+HAL+IS WM++ R   +S  D AIRL LI +V GL  
Sbjct: 65  GNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEHRVHEISEGDVAIRLDLIAKVGGLGE 124

Query: 136 AENYFNSISSQLKTSNVYGALLGSYVREKSVEKAEAIMQEMRKMGIANTSFPYNVLINLY 195
           AE +F +I  + +  ++YGALL  Y  +K + KAE + QEM+++G      PYNV++NLY
Sbjct: 125 AEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLY 184

Query: 196 AQIGQHDKIDLMIEEMKMKGIPQDIYSIRN------------------LWIEEDSGLKAD 255
            + G++  ++ ++ EM+ + +  DI+++                    +  E D GL  D
Sbjct: 185 VRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLD 244

Query: 256 WRIYSIAANRYLSAGLETKAISMLKKMEEKLPPYTNKCAFEFLLSLYERTGRKNEVYRVW 315
           WR Y+  AN Y+ AGL  KA+ ML+K E+ +     K A+E L+S Y   G+K EVYR+W
Sbjct: 245 WRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLW 304

Query: 316 NTFKPLTIQTHVPYALMIRSLAKLDDIEGAERIFQEWESKCTVYDFRVLNQLLVAYCRKG 375
           + +K L    +  Y  +I +L K+DDIE  E+I +EWE+  +++D R+ + L+  YC+KG
Sbjct: 305 SLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKG 364

Query: 376 LFDKAESVVNQAV-VGRTPYASTWSVLAIGYAEYGHMSKSVEMLKKAMLVGRQNWKPKRP 435
           + +KAE VVN  V   R    STW  LA+GY   G M K+VE  K+A+ V +  W+P + 
Sbjct: 365 MMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEKWKRAIEVSKPGWRPHQ- 424

Query: 436 EILEACLDYLEKQGDAETMEEIVRLMYYR 444
            +L +C+DYLE Q D E + +I+RL+  R
Sbjct: 425 VVLMSCVDYLEGQRDMEGLRKILRLLSER 452

[Close]

BLAST of PI0023458.1 vs. TAIR 10
Match: AT2G20710.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 256.9 bits (655), Expect = 3.1e-68
Identity = 136/358 (37.99%), Postives = 210/358 (58.66%), Query Frame = 0


Query: 105 MTDRRYFILSASDAAIRLFLIHRVHGLEHAENYFNSISSQLKTSNVYGALLGSYVREKSV 164
           M++ R   +S  D AIRL LI +V GL  AE +F +I  + +  ++YGALL  Y  +K +
Sbjct: 1   MSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVL 60

Query: 165 EKAEAIMQEMRKMGIANTSFPYNVLINLYAQIGQHDKIDLMIEEMKMKGIPQDIYSIRN- 224
            KAE + QEM+++G      PYNV++NLY + G++  ++ ++ EM+ + +  DI+++   
Sbjct: 61  HKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTR 120

Query: 225 -----------------LWIEEDSGLKADWRIYSIAANRYLSAGLETKAISMLKKMEEKL 284
                            +  E D GL  DWR Y+  AN Y+ AGL  KA+ ML+K E+ +
Sbjct: 121 LHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMV 180

Query: 285 PPYTNKCAFEFLLSLYERTGRKNEVYRVWNTFKPLTIQTHVPYALMIRSLAKLDDIEGAE 344
                K A+E L+S Y   G+K EVYR+W+ +K L    +  Y  +I +L K+DDIE  E
Sbjct: 181 NAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVE 240

Query: 345 RIFQEWESKCTVYDFRVLNQLLVAYCRKGLFDKAESVVNQAV-VGRTPYASTWSVLAIGY 404
           +I +EWE+  +++D R+ + L+  YC+KG+ +KAE VVN  V   R    STW  LA+GY
Sbjct: 241 KIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGY 300

Query: 405 AEYGHMSKSVEMLKKAMLVGRQNWKPKRPEILEACLDYLEKQGDAETMEEIVRLMYYR 444
              G M K+VE  K+A+ V +  W+P +  +L +C+DYLE Q D E + +I+RL+  R
Sbjct: 301 KMAGKMEKAVEKWKRAIEVSKPGWRPHQ-VVLMSCVDYLEGQRDMEGLRKILRLLSER 357

[Close]

BLAST of PI0023458.1 vs. TAIR 10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 247.3 bits (630), Expect = 2.5e-65
Identity = 152/455 (33.41%), Postives = 242/455 (53.19%), Query Frame = 0


Query: 35  SLPFSSTPPPQSTIIRHQILTIRDPKISVIPVLEKWVGDGRAIGKPELQYLVYLTKNFRR 94
           ++ +   P  Q   I  +I  +  P++    VL +W   GR + K EL  +V   + ++R
Sbjct: 55  TVDYERRPIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKR 114

Query: 95  FNHALEISQWMTDR-RYFILSASDAAIRLFLIHRVHGLEHAENYFNSISSQLKTSNVYGA 154
            N ALE+  WM +R   F LSASDAAI+L LI +V G+  AE +F  +    K   VYG+
Sbjct: 115 ANQALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGS 174

Query: 155 LLGSYVREKSVEKAEAIMQEMRKMGIANTSFPYNVLINLYAQIGQHDKIDLMIEEMKMKG 214
           LL +YVR KS EKAEA++  MR  G A    P+NV++ LY  + ++DK+D M+ EMK K 
Sbjct: 175 LLNAYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKD 234

Query: 215 IPQDIYSIRNLWI-------------------EEDSGLKADWRIYSIAANRYLSAGLETK 274
           I  DIYS  N+W+                   + D  +  +W  +S  A  Y+  G   K
Sbjct: 235 IRLDIYSY-NIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEK 294

Query: 275 AISMLKKMEEKLPPYTNKCAFEFLLSLYERTGRKNEVYRVWNTFKPLTIQ-THVPYALMI 334
           A   L+K+E ++    N+  + +LLSLY   G K E+YRVW+ +K +     ++ Y  ++
Sbjct: 295 AEDALRKVEARITG-RNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALV 354

Query: 335 RSLAKLDDIEGAERIFQEWESKCTVYDFRVLNQLLVAYCRKGLFDKAESVVNQAV-VGRT 394
            SL ++ DIEGAE++++EW    + YD R+ N L+ AY +    + AE + +  V +G  
Sbjct: 355 SSLVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGK 414

Query: 395 PYASTWSVLAIGYAEYGHMSKSVEMLKKAMLV-GRQNWKPKRPEILEACLDYLEKQGDAE 454
           P +STW +LA+G+     +S+++  L+ A    G  NW+PK   +L       E++ D  
Sbjct: 415 PSSSTWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPK-VLMLSGFFKLCEEESDVT 474

Query: 455 TMEEIVRLMYYRLLRTSIAGGKPVLSILEQDLRRT 467
           + E ++ L    L ++     K  L++++ D  RT
Sbjct: 475 SKEAVLEL----LRQSGDLEDKSYLALIDVDENRT 502

[Close]

BLAST of PI0023458.1 vs. TAIR 10
Match: AT4G21705.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 236.9 bits (603), Expect = 3.3e-62
Identity = 141/450 (31.33%), Postives = 242/450 (53.78%), Query Frame = 0


Query: 45  QSTIIRHQILTIRDPKISVIPVLEKWVGDGRAIGKPELQYLVYLTKNFRRFNHALEISQW 104
           + T +  +I  + DPK SV P L+ WV  G+ +   EL  +V+  +  +RF HALE+S+W
Sbjct: 23  KKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKW 82

Query: 105 MTDRRYFILSASDAAIRLFLIHRVHGLEHAENYFNSISSQLKTSNVYGALLGSYVREKSV 164
           M +    + S ++ A+ L LI RV+G   AE YF ++  Q K    YGALL  YVR+++V
Sbjct: 83  MNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNV 142

Query: 165 EKAEAIMQEMRKMGIANTSFPYNVLINLYAQIGQHDKIDLMIEEMKMKGIPQDIYSIR-- 224
           EK+    ++M++MG   +S  YN ++ LY  IGQH+K+  ++EEMK + +  D YS R  
Sbjct: 143 EKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRIC 202

Query: 225 -NLW---------------IEEDSGLKADWRIYSIAANRYLSAGLETKAISMLKKMEEKL 284
            N +               +E    +  DW  Y++AA  Y+  G   +A+ +LK  E +L
Sbjct: 203 INAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENRL 262

Query: 285 PPYTNKCAFEFLLSLYERTGRKNEVYRVWNTFKPL-TIQTHVPYALMIRSLAKLDDIEGA 344
                +  +  L++LY R G+K EV R+W+  K +   + +  Y  +++SL K+D +  A
Sbjct: 263 EKKDGE-GYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEA 322

Query: 345 ERIFQEWESKCTVYDFRVLNQLLVAYCRKGLFDKAESVVNQ-AVVGRTPYASTWSVLAIG 404
           E +  EW+S    YDFRV N ++  Y  K + +KAE+++   A  G+     +W ++A  
Sbjct: 323 EEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATA 382

Query: 405 YAEYGHMSKSVEMLKKAM--LVGRQNWKPKRPEILEACLDYLEKQGDAETMEEIV----- 462
           YAE G +  + + +K A+   VG + W+P    ++ + L ++  +G  + +E  V     
Sbjct: 383 YAEKGTLENAFKCMKTALGVEVGSRKWRPGL-TLVTSVLSWVGDEGSLKEVESFVASLRN 442

[Close]

BLAST of PI0023458.1 vs. TAIR 10
Match: AT1G60770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 211.5 bits (537), Expect = 1.5e-54
Identity = 134/429 (31.24%), Postives = 227/429 (52.91%), Query Frame = 0


Query: 60  KISVIPVLEKWVGDGRAIGKPELQYLVYLTKNFRRFNHALEISQWMTDRRYFILSASDAA 119
           ++ V   L +++   + + K E+   +   +N   +  AL++S+ M + R    + SD A
Sbjct: 36  EVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVM-EERGMNKTVSDQA 95

Query: 120 IRLFLIHRVHGLEHAENYFNSISSQLKTSNVYGALLGSYVREKSVEKAEAIMQEMRKMGI 179
           I L L+ +   +   ENYF  +    KT   YG+LL  Y +E   EKAE ++ +M+++ I
Sbjct: 96  IHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNI 155

Query: 180 ANTSFPYNVLINLYAQIGQHDKIDLMIEEMKMKGIPQDIYSIRNLW-------------- 239
             +S  YN L+ LY + G+ +K+  MI+E+K + +  D Y+  N+W              
Sbjct: 156 TPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTY-NVWMRALAATNDISGVE 215

Query: 240 --IEE---DSGLKADWRIYSIAANRYLSAGLETKAISMLKKMEEKLPPYTNKCAFEFLLS 299
             IEE   D  +  DW  YS  A+ Y+ AGL  KA   L+++E K     +  A++FL++
Sbjct: 216 RVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMK-NTQRDFTAYQFLIT 275

Query: 300 LYERTGRKNEVYRVWNTFKPLTIQT-HVPYALMIRSLAKLDDIEGAERIFQEWESKCTVY 359
           LY R G+  EVYR+W + +    +T +V Y  MI+ L KL+D+ GAE +F+EW++ C+ Y
Sbjct: 276 LYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTY 335

Query: 360 DFRVLNQLLVAYCRKGLFDKAESVVNQAV-VGRTPYASTWSVLAIGYAEYGHMSKSVEML 419
           D R++N L+ AY ++GL  KA  +  +A   G    A TW +    Y + G M++++E +
Sbjct: 336 DIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECM 395

Query: 420 KKAMLVGRQN---WKPKRPEILEACLDYLEKQGDAETMEEIVRLM-----------YYRL 454
            KA+ +G+ +   W P  PE + A + Y E++ D    E ++ ++           +  L
Sbjct: 396 SKAVSIGKGDGGKWLPS-PETVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAEIFEPL 455

The following BLAST results are available for this feature:

BLAST of PI0023458.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKU6	2.0e-80	36.30	Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop...	[more]
Q8LPS6	3.5e-64	33.41	Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX...	[more]
Q84JR3	4.7e-61	31.33	Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop...	[more]
O22714	2.1e-53	31.24	Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX...	[more]
Q3E911	6.8e-52	31.70	Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX...	[more]

BLAST of PI0023458.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SQP0	3.6e-229	84.46	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]
A0A1S4E0D2	3.9e-228	84.46	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cuc...	[more]
A0A6J1GLA8	1.2e-192	73.23	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cuc...	[more]
A0A6J1HYW6	2.0e-192	73.52	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cuc...	[more]
A0A6J1D1R6	1.2e-179	69.53	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Mom...	[more]

BLAST of PI0023458.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0031579.1	7.3e-229	84.46	putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] ...	[more]
XP_016901686.1	8.1e-228	84.46	PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-...	[more]
XP_031744657.1	8.4e-209	79.35	pentatricopeptide repeat-containing protein At5g12100, mitochondrial [Cucumis sa...	[more]
KAE8645769.1	8.4e-209	79.35	hypothetical protein Csa_020441 [Cucumis sativus]	[more]
XP_038888307.1	3.7e-204	79.47	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like isofor...	[more]

BLAST of PI0023458.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20710.1	1.4e-81	36.30	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G20710.2	3.1e-68	37.99	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G02150.1	2.5e-65	33.41	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21705.1	3.3e-62	31.33	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G60770.1	1.5e-54	31.24	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 150..179 e-value: 5.4E-6 score: 24.3 coord: 186..217 e-value: 3.1E-4 score: 18.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 149..193 e-value: 3.9E-5 score: 23.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 345..365 e-value: 0.039 score: 14.2 coord: 309..335 e-value: 0.047 score: 14.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 147..181 score: 9.613118
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 182..216 score: 9.437737
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 89..304 e-value: 1.4E-17 score: 66.0 coord: 305..451 e-value: 9.2E-14 score: 53.5
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 236..430
None	No IPR available	PANTHER	PTHR45717	OS12G0527900 PROTEIN	coord: 32..461
None	No IPR available	PANTHER	PTHR45717:SF6	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 32..461

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0023458	PI0023458	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0023458.1-exon	PI0023458.1-exon-chr01:2753888..2753980	exon
PI0023458.1-exon	PI0023458.1-exon-chr01:2754010..2754652	exon
PI0023458.1-exon	PI0023458.1-exon-chr01:2754706..2755079	exon
PI0023458.1-exon	PI0023458.1-exon-chr01:2755699..2755998	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0023458.1-cds	PI0023458.1-cds-chr01:2753888..2753980	CDS
PI0023458.1-cds	PI0023458.1-cds-chr01:2754010..2754652	CDS
PI0023458.1-cds	PI0023458.1-cds-chr01:2754706..2755079	CDS
PI0023458.1-cds	PI0023458.1-cds-chr01:2755699..2755998	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0023458.1	PI0023458.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding