PI0023348.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0023348.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Photosystem I reaction centre subunit N
Location	chr01: 1105527 .. 1107422 (-)
Sequence length	1041
RNA-Seq Expression	PI0023348.1
Synteny	PI0023348.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAAATATTAAGTTTGTTAGAATTTGTATTATATGGACCAAGAAAGCCTCATCTGTTGTTGAACCTCATCCTCAAACTGAAAAAAAAAATAAACTATCTATCACTCCCCTCCCCATGAGTTCCATCGGCCAAAGCATTCTGATGGCCCTTGCCGTCACTCTCAACAAATTTGCTTCTTCCAACGTTCAATCCGTTCAAAGAAACAAAGCCACTCCCACCGCCACCGTCGCTTCACCAATTGGAAGAAGAGGCCTCCTCCTGTCCACTGTTGCCCCCGCCTCTGCTGCCGCCGCCACGGTCGACTCCAGAACAGAGCTGCTAAAAAGTGGTGCATTCTTCTCTAGCTTTGTTCTTCTTTTTTGAAAATTATTATTTGTTTCTTAATTTTCTTCCCTAAGTATTCATTTTTTTCTTCTTCTGAAGTTTAATTTTGGGAGAAGCATCGAACTGAGTTCATCTGTTTTCGTTGTCAAGTTACGATTTTTCGCTCTTTCCAATAATATCGCAAATTTATTTATTTTTTAAAAAAGAAAAAGAAAAATCATTTCCAATTTACCAAAATTTTATATACTGAGAACAATTTAATCATTTAAAATAATTTTAGCTAATTATTCAAACACTTTTGCAAATGAAGTTTTAAATAAGTTATGTATTACAATGAAAAATCATATTGTAGAGCATTAAAAAAAAAAATTAATGTACTTGTAAATTTTTTAAAAGAAGGTTTCTATTTTTCTAAATAAATAATTATATTGAACAGTGTTATCAATAGAAAATATTTGTAAGTATTGTTTACTATTGAATGAGCAATACTAAATAATTGATTGATTCTTTTTTTTTTAATTATATATATAATATAGATTTTTAGAGTTTTGGAAATTACAAGTTTTAGTCCCTAATAATTAATAAAATTTCCTCTAATTATTGACTTTTTCCTTACAAATCAATTATTATGTCTTTTGTATTTAGGGTACCTCAAGAAGTCTGAAGAAAACAAAGAAAAGAATGACAAAGAGGTATTTTTTTTTTTGTAATTTACCCTATATTCTAATGGATCAAAATTGTTAAAATAATCCTTATTTTCTTTTTTGAAAAATGATTCAAATGTGATCCTTCGCTCTTATAATTGTAATTGTAAGATATACAATTGAAGTTTTTTTTTTTTTTTTACATACCTATATGTCACATGATTAATTCTTTGATATAAAAACTTTATAATTTTAGCAGAGATTGGAAAGTTACTACAAGCGAAATTACAAAGATTATTTCGAGTTTGTTGAAGGATCAGTGAAGAATAAGAACGAACTTTCGGAAGCTGAAAAAGGTATTATTGAGTGGCTTAAACGAAATAAATGAAAGATACTTTTCATTTTTATTTGGATTTATTCATCGATAAGTTTCATCCATTGCCATAATTATCACAATAATCTTAATTCAAGGCCTCTAATTTTATTAATTAATAATTGCTTGACTTGTAAAATTTAGAAGCGTGAAAAATAACCAGTGTTGTTCTAGAGTGGTTTTTGTATCATTTTATTTGTCTTTGTTTACTTAATTTTCCCAAAGTGACTCCATTGAAAAGTCAAAAGCAACTTTTATGAAACTAACCCTTTTCAATTTAAGTTTTCAAATTTGGTCAGTTTTGAAAATATTTTAAATTCATGTATAAGTTAAATATGTGCATTCGTATCAATTTATATTTTTGTAAGTGTATCAATTTACACAGTTATTTACATTCCATTTGAAAAAACTGCATGTGGAGCTTGTAGTTGTATCAATTAAACCTCTGAACTTTTATAAATAAATCAATTTAGCCTCTGTATAATAATTTCCTCTAGGAGTCGTTCATGCATTTACACTGACCGTTCATTTTGTAAAATCAACATTGGAAGAAGT

mRNA sequence

ACAAATATTAAGTTTGTTAGAATTTGTATTATATGGACCAAGAAAGCCTCATCTGTTGTTGAACCTCATCCTCAAACTGAAAAAAAAAATAAACTATCTATCACTCCCCTCCCCATGAGTTCCATCGGCCAAAGCATTCTGATGGCCCTTGCCGTCACTCTCAACAAATTTGCTTCTTCCAACGTTCAATCCGTTCAAAGAAACAAAGCCACTCCCACCGCCACCGTCGCTTCACCAATTGGAAGAAGAGGCCTCCTCCTGTCCACTGTTGCCCCCGCCTCTGCTGCCGCCGCCACGGTCGACTCCAGAACAGAGCTGCTAAAAAGGTACCTCAAGAAGTCTGAAGAAAACAAAGAAAAGAATGACAAAGAGAGATTGGAAAGTTACTACAAGCGAAATTACAAAGATTATTTCGAGTTTGTTGAAGGATCAGTGAAGAATAAGAACGAACTTTCGGAAGCTGAAAAAGGTATTATTGAGTGGCTTAAACGAAATAAATGAAAGATACTTTTCATTTTTATTTGGATTTATTCATCGATAAGTTTCATCCATTGCCATAATTATCACAATAATCTTAATTCAAGGCCTCTAATTTTATTAATTAATAATTGCTTGACTTGTAAAATTTAGAAGCGTGAAAAATAACCAGTGTTGTTCTAGAGTGGTTTTTGTATCATTTTATTTGTCTTTGTTTACTTAATTTTCCCAAAGTGACTCCATTGAAAAGTCAAAAGCAACTTTTATGAAACTAACCCTTTTCAATTTAAGTTTTCAAATTTGGTCAGTTTTGAAAATATTTTAAATTCATGTATAAGTTAAATATGTGCATTCGTATCAATTTATATTTTTGTAAGTGTATCAATTTACACAGTTATTTACATTCCATTTGAAAAAACTGCATGTGGAGCTTGTAGTTGTATCAATTAAACCTCTGAACTTTTATAAATAAATCAATTTAGCCTCTGTATAATAATTTCCTCTAGGAGTCGTTCATGCATTTACACTGACCGTTCATTTTGTAAAATCAACATTGGAAGAAGT

Coding sequence (CDS)

ATGAGTTCCATCGGCCAAAGCATTCTGATGGCCCTTGCCGTCACTCTCAACAAATTTGCTTCTTCCAACGTTCAATCCGTTCAAAGAAACAAAGCCACTCCCACCGCCACCGTCGCTTCACCAATTGGAAGAAGAGGCCTCCTCCTGTCCACTGTTGCCCCCGCCTCTGCTGCCGCCGCCACGGTCGACTCCAGAACAGAGCTGCTAAAAAGGTACCTCAAGAAGTCTGAAGAAAACAAAGAAAAGAATGACAAAGAGAGATTGGAAAGTTACTACAAGCGAAATTACAAAGATTATTTCGAGTTTGTTGAAGGATCAGTGAAGAATAAGAACGAACTTTCGGAAGCTGAAAAAGGTATTATTGAGTGGCTTAAACGAAATAAATGA

Protein sequence

MSSIGQSILMALAVTLNKFASSNVQSVQRNKATPTATVASPIGRRGLLLSTVAPASAAAATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK

Homology

[Close]

BLAST of PI0023348.1 vs. ExPASy TrEMBL
Match: A0A1S3C176 (uncharacterized protein LOC103495319 OS=Cucumis melo OX=3656 GN=LOC103495319 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.7e-51
Identity = 122/130 (93.85%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNKATPTATVASPIGRRGLLLSTVAPAS--AA 60
           MSSIGQSILMALAVTLNKFASSNVQSVQRNKA  TATV+SPIGRR LLLSTVAPAS  AA
Sbjct: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNKA--TATVSSPIGRRDLLLSTVAPASTAAA 60

Query: 61  AATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNKNELSEAEK 120
           AA VDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNKNELSEAEK
Sbjct: 61  AAAVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNKNELSEAEK 120

Query: 121 GIIEWLKRNK 129
           GI+EWLKRNK
Sbjct: 121 GIVEWLKRNK 128

[Close]

BLAST of PI0023348.1 vs. ExPASy TrEMBL
Match: A0A6J1JNZ7 (uncharacterized protein LOC111486201 OS=Cucurbita maxima OX=3661 GN=LOC111486201 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 4.0e-42
Identity = 106/133 (79.70%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNK-----ATPTATVASPIGRRGLLLSTVAPA 60
           MSSIGQ+ILMALA+TLN+FASSNVQSVQRNK      T T + +S I RRGLLLS     
Sbjct: 1   MSSIGQNILMALALTLNQFASSNVQSVQRNKPKTPPTTATTSASSDIQRRGLLLS----- 60

Query: 61  SAAAATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNKNELSE 120
           +A AA VDSRTELLKRYLKKSEENKEKNDKERLES+YKRNYKDYFEFVEGS+KNK+ELSE
Sbjct: 61  AAVAAAVDSRTELLKRYLKKSEENKEKNDKERLESFYKRNYKDYFEFVEGSLKNKDELSE 120

Query: 121 AEKGIIEWLKRNK 129
           AEKGIIEWLKRNK
Sbjct: 121 AEKGIIEWLKRNK 128

[Close]

BLAST of PI0023348.1 vs. ExPASy TrEMBL
Match: A0A6J1D574 (uncharacterized protein LOC111017388 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017388 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.0e-41
Identity = 104/128 (81.25%), Postives = 112/128 (87.50%), Query Frame = 0


Query: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNKATPTATVASPIGRRGLLLSTVAPASAAAA 60
           MSSIGQSILMALAVT+NKFASSNVQSV RN++   A  AS IGRRGLL S VA   AA A
Sbjct: 1   MSSIGQSILMALAVTVNKFASSNVQSVHRNQS--AAAAASDIGRRGLLFSAVA---AAVA 60

Query: 61  TVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNKNELSEAEKGI 120
            VDSRTELLKRYLKKSE+NKEKNDKERL+SYYKRNYKDYFEFVEGSV+NK+ELSE EK I
Sbjct: 61  PVDSRTELLKRYLKKSEQNKEKNDKERLDSYYKRNYKDYFEFVEGSVRNKSELSETEKDI 120

Query: 121 IEWLKRNK 129
           IEWL+RNK
Sbjct: 121 IEWLRRNK 123

[Close]

BLAST of PI0023348.1 vs. ExPASy TrEMBL
Match: A0A6J1EM63 (uncharacterized protein LOC111434615 OS=Cucurbita moschata OX=3662 GN=LOC111434615 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 3.4e-41
Identity = 108/138 (78.26%), Postives = 115/138 (83.33%), Query Frame = 0


Query: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNK-ATPTATVA---------SPIGRRGLLLS 60
           MSSIGQ+ILMALA+TLN+FASSNVQSVQRNK  TP  T A         S I RRGLLLS
Sbjct: 1   MSSIGQNILMALALTLNQFASSNVQSVQRNKPKTPPTTTATTSASTSASSDIQRRGLLLS 60

Query: 61  TVAPASAAAATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNK 120
                +A AA VDSRTELLKRYLKKSEENKEKNDKERLES+YKRNYKDYFEFVEGS+KNK
Sbjct: 61  -----AAVAAAVDSRTELLKRYLKKSEENKEKNDKERLESFYKRNYKDYFEFVEGSLKNK 120

Query: 121 NELSEAEKGIIEWLKRNK 129
           +ELSEAEKGIIEWLKRNK
Sbjct: 121 DELSEAEKGIIEWLKRNK 133

[Close]

BLAST of PI0023348.1 vs. ExPASy TrEMBL
Match: W9R137 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_011132 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.4e-34
Identity = 91/129 (70.54%), Postives = 102/129 (79.07%), Query Frame = 0


Query: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNKATPTATVASPIGRRGLLLSTVAPASAAAA 60
           MSSIGQSILMAL VT+NK+ASSNVQ+V R +  PT    + IGRRGL LSTV    AA  
Sbjct: 1   MSSIGQSILMALTVTVNKYASSNVQAVHRKRKRPTTATTTDIGRRGLFLSTVV---AALQ 60

Query: 61  TVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNK-NELSEAEKG 120
             DSRTELLK+YLKKSEENK KNDKERL SYYKRNYKDYFE VEG+++ K  ELSEAEKG
Sbjct: 61  VSDSRTELLKKYLKKSEENKAKNDKERLNSYYKRNYKDYFELVEGTLRGKEGELSEAEKG 120

Query: 121 IIEWLKRNK 129
           I +WL+ NK
Sbjct: 121 IRDWLQSNK 126

[Close]

BLAST of PI0023348.1 vs. NCBI nr
Match: XP_004136934.1 (uncharacterized protein LOC101214221 [Cucumis sativus] >KAE8645839.1 hypothetical protein Csa_017171 [Cucumis sativus])

HSP 1 Score: 216.5 bits (550), Expect = 1.4e-52
Identity = 122/129 (94.57%), Postives = 126/129 (97.67%), Query Frame = 0


Query: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNKATPTATVASPIGRRGLLLSTVAPASAAAA 60
           MSSIGQSILMALAVTLNKFASSNVQSVQRNKAT TATV+SPIGRR LLLST+APASAAAA
Sbjct: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNKATATATVSSPIGRRSLLLSTLAPASAAAA 60

Query: 61  -TVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNKNELSEAEKG 120
            TVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNKNELSEAEKG
Sbjct: 61  STVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNKNELSEAEKG 120

Query: 121 IIEWLKRNK 129
           I+EWLKR+K
Sbjct: 121 IVEWLKRSK 129

[Close]

BLAST of PI0023348.1 vs. NCBI nr
Match: XP_008455049.1 (PREDICTED: uncharacterized protein LOC103495319 [Cucumis melo])

HSP 1 Score: 210.3 bits (534), Expect = 9.8e-51
Identity = 122/130 (93.85%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNKATPTATVASPIGRRGLLLSTVAPAS--AA 60
           MSSIGQSILMALAVTLNKFASSNVQSVQRNKA  TATV+SPIGRR LLLSTVAPAS  AA
Sbjct: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNKA--TATVSSPIGRRDLLLSTVAPASTAAA 60

Query: 61  AATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNKNELSEAEK 120
           AA VDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNKNELSEAEK
Sbjct: 61  AAAVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNKNELSEAEK 120

Query: 121 GIIEWLKRNK 129
           GI+EWLKRNK
Sbjct: 121 GIVEWLKRNK 128

[Close]

BLAST of PI0023348.1 vs. NCBI nr
Match: XP_038887440.1 (uncharacterized protein LOC120077574 [Benincasa hispida])

HSP 1 Score: 196.4 bits (498), Expect = 1.5e-46
Identity = 116/133 (87.22%), Postives = 118/133 (88.72%), Query Frame = 0


Query: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNKA----TPTATVASPIGRRGLLLSTVAPAS 60
           MSSIGQSILMALAVTLNKFASSNVQSVQRN+A    T TAT  S IGRRGLLLS VA A+
Sbjct: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPRTATATTGSTIGRRGLLLSAVAAAA 60

Query: 61  AA-AATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNKNELSE 120
           A     VDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNKNELSE
Sbjct: 61  ATPEEAVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNKNELSE 120

Query: 121 AEKGIIEWLKRNK 129
           AEKGIIEWLKRNK
Sbjct: 121 AEKGIIEWLKRNK 133

[Close]

BLAST of PI0023348.1 vs. NCBI nr
Match: XP_022989008.1 (uncharacterized protein LOC111486201 [Cucurbita maxima])

HSP 1 Score: 180.6 bits (457), Expect = 8.3e-42
Identity = 106/133 (79.70%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNK-----ATPTATVASPIGRRGLLLSTVAPA 60
           MSSIGQ+ILMALA+TLN+FASSNVQSVQRNK      T T + +S I RRGLLLS     
Sbjct: 1   MSSIGQNILMALALTLNQFASSNVQSVQRNKPKTPPTTATTSASSDIQRRGLLLS----- 60

Query: 61  SAAAATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNKNELSE 120
           +A AA VDSRTELLKRYLKKSEENKEKNDKERLES+YKRNYKDYFEFVEGS+KNK+ELSE
Sbjct: 61  AAVAAAVDSRTELLKRYLKKSEENKEKNDKERLESFYKRNYKDYFEFVEGSLKNKDELSE 120

Query: 121 AEKGIIEWLKRNK 129
           AEKGIIEWLKRNK
Sbjct: 121 AEKGIIEWLKRNK 128

[Close]

BLAST of PI0023348.1 vs. NCBI nr
Match: XP_022148828.1 (uncharacterized protein LOC111017388 isoform X1 [Momordica charantia])

HSP 1 Score: 178.3 bits (451), Expect = 4.1e-41
Identity = 104/128 (81.25%), Postives = 112/128 (87.50%), Query Frame = 0


Query: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNKATPTATVASPIGRRGLLLSTVAPASAAAA 60
           MSSIGQSILMALAVT+NKFASSNVQSV RN++   A  AS IGRRGLL S VA   AA A
Sbjct: 1   MSSIGQSILMALAVTVNKFASSNVQSVHRNQS--AAAAASDIGRRGLLFSAVA---AAVA 60

Query: 61  TVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNKNELSEAEKGI 120
            VDSRTELLKRYLKKSE+NKEKNDKERL+SYYKRNYKDYFEFVEGSV+NK+ELSE EK I
Sbjct: 61  PVDSRTELLKRYLKKSEQNKEKNDKERLDSYYKRNYKDYFEFVEGSVRNKSELSETEKDI 120

Query: 121 IEWLKRNK 129
           IEWL+RNK
Sbjct: 121 IEWLRRNK 123

[Close]

BLAST of PI0023348.1 vs. TAIR 10
Match: AT1G49975.1 (INVOLVED IN: photosynthesis; LOCATED IN: photosystem I, chloroplast, thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit N (InterPro:IPR008796); Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 136.7 bits (343), Expect = 1.3e-32
Identity = 83/132 (62.88%), Postives = 101/132 (76.52%), Query Frame = 0


Query: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNKATPTATVASP--IGRRGLLLSTVAPASAA 60
           MSSI QSILMAL VT+NK+ASSNVQ+V+RN     +  A P  +GRR +L S+    S  
Sbjct: 1   MSSISQSILMALTVTVNKYASSNVQAVRRNDTKRHSLTAPPADLGRRNILFSS---TSFI 60

Query: 61  AATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNKN--ELSEA 120
           AA + S  +LL++YLKK+EENK KNDKERL+S+YKRNYKDYFEFVEGS+K K   ELSE+
Sbjct: 61  AAALTSSDQLLQKYLKKTEENKAKNDKERLDSFYKRNYKDYFEFVEGSIKGKTEAELSES 120

Query: 121 EKGIIEWLKRNK 129
           EK I+EWLK NK
Sbjct: 121 EKRILEWLKANK 129

The following BLAST results are available for this feature:

BLAST of PI0023348.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0023348.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C176	4.7e-51	93.85	uncharacterized protein LOC103495319 OS=Cucumis melo OX=3656 GN=LOC103495319 PE=...	[more]
A0A6J1JNZ7	4.0e-42	79.70	uncharacterized protein LOC111486201 OS=Cucurbita maxima OX=3661 GN=LOC111486201...	[more]
A0A6J1D574	2.0e-41	81.25	uncharacterized protein LOC111017388 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1EM63	3.4e-41	78.26	uncharacterized protein LOC111434615 OS=Cucurbita moschata OX=3662 GN=LOC1114346...	[more]
W9R137	1.4e-34	70.54	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_011132 PE=3 SV=1	[more]

BLAST of PI0023348.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136934.1	1.4e-52	94.57	uncharacterized protein LOC101214221 [Cucumis sativus] >KAE8645839.1 hypothetica...	[more]
XP_008455049.1	9.8e-51	93.85	PREDICTED: uncharacterized protein LOC103495319 [Cucumis melo]	[more]
XP_038887440.1	1.5e-46	87.22	uncharacterized protein LOC120077574 [Benincasa hispida]	[more]
XP_022989008.1	8.3e-42	79.70	uncharacterized protein LOC111486201 [Cucurbita maxima]	[more]
XP_022148828.1	4.1e-41	81.25	uncharacterized protein LOC111017388 isoform X1 [Momordica charantia]	[more]

BLAST of PI0023348.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49975.1	1.3e-32	62.88	INVOLVED IN: photosynthesis; LOCATED IN: photosystem I, chloroplast, thylakoid m...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 69..89
None	No IPR available	PANTHER	PTHR36327	UNNAMED PRODUCT	coord: 13..128
IPR008796	Photosystem I reaction centre subunit N, chloroplastic	PFAM	PF05479	PsaN	coord: 28..92 e-value: 2.0E-6 score: 28.0

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0023348	PI0023348	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0023348.1-exon	PI0023348.1-exon-chr01:1105527..1106195	exon
PI0023348.1-exon	PI0023348.1-exon-chr01:1106407..1106453	exon
PI0023348.1-exon	PI0023348.1-exon-chr01:1107098..1107422	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0023348.1-three_prime_utr	PI0023348.1-three_prime_utr-chr01:1105527..1106066	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0023348.1-cds	PI0023348.1-cds-chr01:1106067..1106195	CDS
PI0023348.1-cds	PI0023348.1-cds-chr01:1106407..1106453	CDS
PI0023348.1-cds	PI0023348.1-cds-chr01:1107098..1107308	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0023348.1-five_prime_utr	PI0023348.1-five_prime_utr-chr01:1107309..1107422	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0023348.1	PI0023348.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009507	chloroplast