PI0023039.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0023039.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr11: 28104597 .. 28106157 (-)
Sequence length	1561
RNA-Seq Expression	PI0023039.1
Synteny	PI0023039.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATACGAAGTCTTGATTCCTTAGCCAGTTTCTTCCGCCATTCTTCTCAAATTAAAAATCTTAAAACCATTAAGAAGATTCATGCTCATTTGCTTAGAACCCACTTCCAATTTTTCTCCCCGAATCTTCACTCTAAGTTTATACTATCCTACTCCCAAATCATTCCCAATTTTGATGCGCAAAGCTTAAACAGCATCTTCAAATGCATCATCCCCAGAACTTCTTTAACCTTCAATGTAATGATTTCTGACTTTTCTCGACATGGGTTTCCAGATTTTGCGTTAATGGGGTTTTCTTTCATGCATTCTAATGGGGTTCCTATTGACACGTATGCCCTTTGCAGCTCTTTGAATGGTTGTTCTTTTGTTCAGAATGTGGTGTACGGAAAACAAATTCACGCATTTGTGGGGAAATCAGGTTGGTTTTGTAGTGTTTTTGTTGGGAGTACAATTGTTGATATGTATGCAAAAAATTCGTTGATTTATGATGCAGTTGAAATGTTTGATGAAATGCCTATGAAGAATACTGTGTGCTCAAATGCATTGCTGGCTGGGTATTGCGAGGCTAAGATGTGGGTTGAAGGACTTGAATTGCTACGGAAGATGCAGGGTCTGGATTTGAAGTATGACCAATTCACTCTGTCTGCTTCTTTACGTGCATGCACTGGTTTGTCTGCAATTGCACTAGGCAAGCAAGTGCATGCTTATATACTGCGAACGGTTTATGATATTACAAGTGATGTTCATTTGCAAAGCTCATTACTTGAAATGTATGGGAAGAATGGGATGGTGGAAAAAGCATGGAATGTATTCAATTTTGCAGGACTTGGACAACAAGAAGATGGGAAAAGGGATATTATAATGTGGACTTCTATGCTTAGTGTATATGGTAGAAATGGGTGTTACAAAAGAGTAATTGAACTGTACAACCAGATGTTGATGGAAGGGATCAAACCAGATAGGGTGGCTTTTGTGACAGTCATATCAGCTTGTGGTTATACTGGCGAGGTGAATCTTGGAGTCAAGTATTTTGACTCCATGCAGAGTGATTTTGGGTTGGCACCTGGTCAAGAGCACTACAGTTGTTTGGTTGACTTGCTCTGTAGAGCTGGGGAATTGGAAAAGGCATGGAAGCTTGTAAATGGTATCAAAAGTCAGGATTATAATGTTTCCCTGTGGGGAGCTTTACTCCGTGCTTGCTTGGAGCAGGGAAATATTAAGTTGGGCAATTTGGCAGCTCGTAGGGCACTTGAATTGGATCCTCAGAATGCTGGGGTATTTATTATGCAATCGAATCTATATGCTGGTCTTGGCTTGTGGAATGAGATAGAGCATTTGAGGGAATTTGTGAGAAAGGAACGGCTGCATAAAGATGTTGGATGTAGCTGGATAGAGATCACAAGTTGAGCATTACTCAAATAACCTTATGTAAAAGTTAAACTGCTCAATTTGACATTGTTTTACGAGGAAATTGTTTATTTTGAGGTGCTATGATGAAATGGTTTTATGCTAAATTACGAGGAAATCTCAATGAGAAAGGAACGAGTAGTTTGTATCA

mRNA sequence

ATGGCTATACGAAGTCTTGATTCCTTAGCCAGTTTCTTCCGCCATTCTTCTCAAATTAAAAATCTTAAAACCATTAAGAAGATTCATGCTCATTTGCTTAGAACCCACTTCCAATTTTTCTCCCCGAATCTTCACTCTAAGTTTATACTATCCTACTCCCAAATCATTCCCAATTTTGATGCGCAAAGCTTAAACAGCATCTTCAAATGCATCATCCCCAGAACTTCTTTAACCTTCAATGTAATGATTTCTGACTTTTCTCGACATGGGTTTCCAGATTTTGCGTTAATGGGGTTTTCTTTCATGCATTCTAATGGGGTTCCTATTGACACGTATGCCCTTTGCAGCTCTTTGAATGGTTGTTCTTTTGTTCAGAATGTGGTGTACGGAAAACAAATTCACGCATTTGTGGGGAAATCAGGTTGGTTTTGTAGTGTTTTTGTTGGGAGTACAATTGTTGATATGTATGCAAAAAATTCGTTGATTTATGATGCAGTTGAAATGTTTGATGAAATGCCTATGAAGAATACTGTGTGCTCAAATGCATTGCTGGCTGGGTATTGCGAGGCTAAGATGTGGGTTGAAGGACTTGAATTGCTACGGAAGATGCAGGGTCTGGATTTGAAGTATGACCAATTCACTCTGTCTGCTTCTTTACGTGCATGCACTGGTTTGTCTGCAATTGCACTAGGCAAGCAAGTGCATGCTTATATACTGCGAACGGTTTATGATATTACAAGTGATGTTCATTTGCAAAGCTCATTACTTGAAATGTATGGGAAGAATGGGATGGTGGAAAAAGCATGGAATGTATTCAATTTTGCAGGACTTGGACAACAAGAAGATGGGAAAAGGGATATTATAATGTGGACTTCTATGCTTAGTGTATATGGTAGAAATGGGTGTTACAAAAGAGTAATTGAACTGTACAACCAGATGTTGATGGAAGGGATCAAACCAGATAGGGTGGCTTTTGTGACAGTCATATCAGCTTGTGGTTATACTGGCGAGGTGAATCTTGGAGTCAAGTATTTTGACTCCATGCAGAGTGATTTTGGGTTGGCACCTGGTCAAGAGCACTACAGTTGTTTGGTTGACTTGCTCTGTAGAGCTGGGGAATTGGAAAAGGCATGGAAGCTTGTAAATGGTATCAAAAGTCAGGATTATAATGTTTCCCTGTGGGGAGCTTTACTCCGTGCTTGCTTGGAGCAGGGAAATATTAAGTTGGGCAATTTGGCAGCTCGTAGGGCACTTGAATTGGATCCTCAGAATGCTGGGGTATTTATTATGCAATCGAATCTATATGCTGGTCTTGGCTTGTGGAATGAGATAGAGCATTTGAGGGAATTTGTGAGAAAGGAACGGCTGCATAAAGATGTTGGATGTAGCTGGATAGAGATCACAAGTTGAGCATTACTCAAATAACCTTATGTAAAAGTTAAACTGCTCAATTTGACATTGTTTTACGAGGAAATTGTTTATTTTGAGGTGCTATGATGAAATGGTTTTATGCTAAATTACGAGGAAATCTCAATGAGAAAGGAACGAGTAGTTTGTATCA

Coding sequence (CDS)

ATGGCTATACGAAGTCTTGATTCCTTAGCCAGTTTCTTCCGCCATTCTTCTCAAATTAAAAATCTTAAAACCATTAAGAAGATTCATGCTCATTTGCTTAGAACCCACTTCCAATTTTTCTCCCCGAATCTTCACTCTAAGTTTATACTATCCTACTCCCAAATCATTCCCAATTTTGATGCGCAAAGCTTAAACAGCATCTTCAAATGCATCATCCCCAGAACTTCTTTAACCTTCAATGTAATGATTTCTGACTTTTCTCGACATGGGTTTCCAGATTTTGCGTTAATGGGGTTTTCTTTCATGCATTCTAATGGGGTTCCTATTGACACGTATGCCCTTTGCAGCTCTTTGAATGGTTGTTCTTTTGTTCAGAATGTGGTGTACGGAAAACAAATTCACGCATTTGTGGGGAAATCAGGTTGGTTTTGTAGTGTTTTTGTTGGGAGTACAATTGTTGATATGTATGCAAAAAATTCGTTGATTTATGATGCAGTTGAAATGTTTGATGAAATGCCTATGAAGAATACTGTGTGCTCAAATGCATTGCTGGCTGGGTATTGCGAGGCTAAGATGTGGGTTGAAGGACTTGAATTGCTACGGAAGATGCAGGGTCTGGATTTGAAGTATGACCAATTCACTCTGTCTGCTTCTTTACGTGCATGCACTGGTTTGTCTGCAATTGCACTAGGCAAGCAAGTGCATGCTTATATACTGCGAACGGTTTATGATATTACAAGTGATGTTCATTTGCAAAGCTCATTACTTGAAATGTATGGGAAGAATGGGATGGTGGAAAAAGCATGGAATGTATTCAATTTTGCAGGACTTGGACAACAAGAAGATGGGAAAAGGGATATTATAATGTGGACTTCTATGCTTAGTGTATATGGTAGAAATGGGTGTTACAAAAGAGTAATTGAACTGTACAACCAGATGTTGATGGAAGGGATCAAACCAGATAGGGTGGCTTTTGTGACAGTCATATCAGCTTGTGGTTATACTGGCGAGGTGAATCTTGGAGTCAAGTATTTTGACTCCATGCAGAGTGATTTTGGGTTGGCACCTGGTCAAGAGCACTACAGTTGTTTGGTTGACTTGCTCTGTAGAGCTGGGGAATTGGAAAAGGCATGGAAGCTTGTAAATGGTATCAAAAGTCAGGATTATAATGTTTCCCTGTGGGGAGCTTTACTCCGTGCTTGCTTGGAGCAGGGAAATATTAAGTTGGGCAATTTGGCAGCTCGTAGGGCACTTGAATTGGATCCTCAGAATGCTGGGGTATTTATTATGCAATCGAATCTATATGCTGGTCTTGGCTTGTGGAATGAGATAGAGCATTTGAGGGAATTTGTGAGAAAGGAACGGCTGCATAAAGATGTTGGATGTAGCTGGATAGAGATCACAAGTTGA

Protein sequence

MAIRSLDSLASFFRHSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSKFILSYSQIIPNFDAQSLNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNGCSFVQNVVYGKQIHAFVGKSGWFCSVFVGSTIVDMYAKNSLIYDAVEMFDEMPMKNTVCSNALLAGYCEAKMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVYDITSDVHLQSSLLEMYGKNGMVEKAWNVFNFAGLGQQEDGKRDIIMWTSMLSVYGRNGCYKRVIELYNQMLMEGIKPDRVAFVTVISACGYTGEVNLGVKYFDSMQSDFGLAPGQEHYSCLVDLLCRAGELEKAWKLVNGIKSQDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQNAGVFIMQSNLYAGLGLWNEIEHLREFVRKERLHKDVGCSWIEITS

Homology

[Close]

BLAST of PI0023039.1 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.3e-66
Identity = 130/409 (31.78%), Postives = 234/409 (57.21%), Query Frame = 0


Query: 60  DAQSLNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLN 119
           D  S  ++F+ +  R+ +++  MI+ ++R G    A+  F  M   G+  D Y + + LN
Sbjct: 346 DLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 405

Query: 120 GCSFVQNVVYGKQIHAFVGKSGWFCSVFVGSTIVDMYAKNSLIYDAVEMFDEMPMKNTVC 179
            C+  + +  GK++H ++ ++     +FV + ++DMYAK   + +A  +F EM +K+ + 
Sbjct: 406 CCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS 465

Query: 180 SNALLAGYCEAKMWVEGLELLR-KMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYI 239
            N ++ GY +     E L L    ++      D+ T++  L AC  LSA   G+++H YI
Sbjct: 466 WNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYI 525

Query: 240 LRTVYDITSDVHLQSSLLEMYGKNGMVEKAWNVFNFAGLGQQEDGKRDIIMWTSMLSVYG 299
           +R  Y   SD H+ +SL++MY K G +  A  +F+       +   +D++ WT M++ YG
Sbjct: 526 MRNGY--FSDRHVANSLVDMYAKCGALLLAHMLFD-------DIASKDLVSWTVMIAGYG 585

Query: 300 RNGCYKRVIELYNQMLMEGIKPDRVAFVTVISACGYTGEVNLGVKYFDSMQSDFGLAPGQ 359
            +G  K  I L+NQM   GI+ D ++FV+++ AC ++G V+ G ++F+ M+ +  + P  
Sbjct: 586 MHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTV 645

Query: 360 EHYSCLVDLLCRAGELEKAWKLVNGIKSQDYNVSLWGALLRACLEQGNIKLGNLAARRAL 419
           EHY+C+VD+L R G+L KA++ +  +     + ++WGALL  C    ++KL    A +  
Sbjct: 646 EHYACIVDMLARTGDLIKAYRFIENMPIPP-DATIWGALLCGCRIHHDVKLAEKVAEKVF 705

Query: 420 ELDPQNAGVFIMQSNLYAGLGLWNEIEHLREFVRKERLHKDVGCSWIEI 468
           EL+P+N G +++ +N+YA    W +++ LR+ + +  L K+ GCSWIEI
Sbjct: 706 ELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEI 744

[Close]

BLAST of PI0023039.1 vs. ExPASy Swiss-Prot
Match: Q9LZ19 (Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H16 PE=2 SV=2)

HSP 1 Score: 255.0 bits (650), Expect = 1.7e-66
Identity = 134/401 (33.42%), Postives = 244/401 (60.85%), Query Frame = 0


Query: 67  IFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNGCSFVQN 126
           +F  ++ R+ +++N MI  ++R+     AL  F  M + G     + + S L+ C    +
Sbjct: 118 VFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCD 177

Query: 127 VVYGKQIHAFVGKSGWFCSVFVGSTIVDMYAKNSLIYDAVEMFDEMPMKNTVCSNALLAG 186
            +  K++H    K+    +++VG+ ++D+YAK  +I DAV++F+ M  K++V  ++++AG
Sbjct: 178 ALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAG 237

Query: 187 YCEAKMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVYDIT 246
           Y + K + E L L R+ Q + L+ +QFTLS+ + AC+ L+A+  GKQ+HA I ++ +   
Sbjct: 238 YVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFG-- 297

Query: 247 SDVHLQSSLLEMYGKNGMVEKAWNVFNFAGLGQQEDGKRDIIMWTSMLSVYGRNGCYKRV 306
           S+V + SS ++MY K G + +++ +F+       E  ++++ +W +++S + ++   K V
Sbjct: 298 SNVFVASSAVDMYAKCGSLRESYIIFS-------EVQEKNLELWNTIISGFAKHARPKEV 357

Query: 307 IELYNQMLMEGIKPDRVAFVTVISACGYTGEVNLGVKYFDSMQSDFGLAPGQEHYSCLVD 366
           + L+ +M  +G+ P+ V F +++S CG+TG V  G ++F  M++ +GL+P   HYSC+VD
Sbjct: 358 MILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVD 417

Query: 367 LLCRAGELEKAWKLVNGIKSQDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQNAG 426
           +L RAG L +A++L+  I   D   S+WG+LL +C    N++L  +AA +  EL+P+NAG
Sbjct: 418 ILGRAGLLSEAYELIKSIPF-DPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAG 477

Query: 427 VFIMQSNLYAGLGLWNEIEHLREFVRKERLHKDVGCSWIEI 468
             ++ SN+YA    W EI   R+ +R   + K  G SWI+I
Sbjct: 478 NHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDI 508

[Close]

BLAST of PI0023039.1 vs. ExPASy Swiss-Prot
Match: Q0WN60 (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H8 PE=2 SV=2)

HSP 1 Score: 250.8 bits (639), Expect = 3.1e-65
Identity = 134/446 (30.04%), Postives = 251/446 (56.28%), Query Frame = 0


Query: 22  LKTIKKIHAHLLRTHFQFFSPNLHSKFILSYSQIIPNFDAQSLNSIFKCIIPRTSLTFNV 81
           L ++K++H + L+  F  ++  + + F+ SY++      AQ    +F  I  +T  ++N 
Sbjct: 411 LPSLKELHCYSLKQEF-VYNELVANAFVASYAKCGSLSYAQ---RVFHGIRSKTVNSWNA 470

Query: 82  MISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNGCSFVQNVVYGKQIHAFVGKSG 141
           +I   ++   P  +L     M  +G+  D++ +CS L+ CS ++++  GK++H F+ ++ 
Sbjct: 471 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 530

Query: 142 WFCSVFVGSTIVDMYAKNSLIYDAVEMFDEMPMKNTVCSNALLAGYCEAKMWVEGLELLR 201
               +FV  +++ +Y     +     +FD M  K+ V  N ++ GY +       L + R
Sbjct: 531 LERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFR 590

Query: 202 KMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVYDITSDVHLQSSLLEMYGK 261
           +M    ++    ++     AC+ L ++ LG++ HAY L+ +  +  D  +  SL++MY K
Sbjct: 591 QMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHL--LEDDAFIACSLIDMYAK 650

Query: 262 NGMVEKAWNVFNFAGLGQQEDGKRDIIMWTSMLSVYGRNGCYKRVIELYNQMLMEGIKPD 321
           NG + ++  VFN  GL ++         W +M+  YG +G  K  I+L+ +M   G  PD
Sbjct: 651 NGSITQSSKVFN--GLKEKSTAS-----WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPD 710

Query: 322 RVAFVTVISACGYTGEVNLGVKYFDSMQSDFGLAPGQEHYSCLVDLLCRAGELEKAWKLV 381
            + F+ V++AC ++G ++ G++Y D M+S FGL P  +HY+C++D+L RAG+L+KA ++V
Sbjct: 711 DLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVV 770

Query: 382 NGIKSQDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQNAGVFIMQSNLYAGLGLW 441
               S++ +V +W +LL +C    N+++G   A +  EL+P+    +++ SNLYAGLG W
Sbjct: 771 AEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKW 830

Query: 442 NEIEHLREFVRKERLHKDVGCSWIEI 468
            ++  +R+ + +  L KD GCSWIE+
Sbjct: 831 EDVRKVRQRMNEMSLRKDAGCSWIEL 843

[Close]

BLAST of PI0023039.1 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 7.0e-65
Identity = 139/440 (31.59%), Postives = 230/440 (52.27%), Query Frame = 0


Query: 60  DAQSLNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLN 119
           D  S   +F  I  +  +++N MI+ F + G PD AL  F  M S  V      +   L+
Sbjct: 181 DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLS 240

Query: 120 GCSFVQNVVYGKQIHAFVGKSGWFCSVFVGSTIVDMYAKNSLIYDAVEMFDEMPMKNTVC 179
            C+ ++N+ +G+Q+ +++ ++    ++ + + ++DMY K   I DA  +FD M  K+ V 
Sbjct: 241 ACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVT 300

Query: 180 SNALLAGYCEAKMWVEGLELLRKMQGLD-------------------------------- 239
              +L GY  ++ +    E+L  M   D                                
Sbjct: 301 WTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKN 360

Query: 240 LKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVYDITSDVHLQSSLLEMYGKNGMVEK 299
           +K +Q TL ++L AC  + A+ LG+ +H+YI +  + I  + H+ S+L+ MY K G +EK
Sbjct: 361 MKLNQITLVSTLSACAQVGALELGRWIHSYIKK--HGIRMNFHVTSALIHMYSKCGDLEK 420

Query: 300 AWNVFNFAGLGQQEDGKRDIIMWTSMLSVYGRNGCYKRVIELYNQMLMEGIKPDRVAFVT 359
           +  VFN          KRD+ +W++M+     +GC    ++++ +M    +KP+ V F  
Sbjct: 421 SREVFNSV-------EKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTN 480

Query: 360 VISACGYTGEVNLGVKYFDSMQSDFGLAPGQEHYSCLVDLLCRAGELEKAWKLVNGIKSQ 419
           V  AC +TG V+     F  M+S++G+ P ++HY+C+VD+L R+G LEKA K +  +   
Sbjct: 481 VFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIP 540

Query: 420 DYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQNAGVFIMQSNLYAGLGLWNEIEHL 468
             + S+WGALL AC    N+ L  +A  R LEL+P+N G  ++ SN+YA LG W  +  L
Sbjct: 541 P-STSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSEL 600

[Close]

BLAST of PI0023039.1 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 3.5e-64
Identity = 155/496 (31.25%), Postives = 260/496 (52.42%), Query Frame = 0


Query: 8   SLASFFRHSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSKFILSYSQIIPNFDAQSLNSI 67
           S AS     S + ++    ++H+ + ++ F      + S  +  YS+     DAQ    +
Sbjct: 154 SFASVLSACSGLNDMNKGVQVHSLIAKSPF-LSDVYIGSALVDMYSKCGNVNDAQ---RV 213

Query: 68  FKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNGCSFVQNV 127
           F  +  R  +++N +I+ F ++G    AL  F  M  + V  D   L S ++ C+ +  +
Sbjct: 214 FDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAI 273

Query: 128 VYGKQIHAFVGKSGWFCS-VFVGSTIVDMYAKNSLIYDAVEMFDEMPMKNTVCS------ 187
             G+++H  V K+    + + + +  VDMYAK S I +A  +FD MP++N +        
Sbjct: 274 KVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISG 333

Query: 188 -------------------------NALLAGYCEAKMWVEGLELLRKMQGLDLKYDQFTL 247
                                    NAL+AGY +     E L L   ++   +    ++ 
Sbjct: 334 YAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSF 393

Query: 248 SASLRACTGLSAIALGKQVHAYILRTVYDITS----DVHLQSSLLEMYGKNGMVEKAWNV 307
           +  L+AC  L+ + LG Q H ++L+  +   S    D+ + +SL++MY K G VE+ + V
Sbjct: 394 ANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLV 453

Query: 308 FNFAGLGQQEDGKRDIIMWTSMLSVYGRNGCYKRVIELYNQMLMEGIKPDRVAFVTVISA 367
           F       ++  +RD + W +M+  + +NG     +EL+ +ML  G KPD +  + V+SA
Sbjct: 454 F-------RKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSA 513

Query: 368 CGYTGEVNLGVKYFDSMQSDFGLAPGQEHYSCLVDLLCRAGELEKAWKLVNGIKSQDYNV 427
           CG+ G V  G  YF SM  DFG+AP ++HY+C+VDLL RAG LE+A  ++  +  Q  +V
Sbjct: 514 CGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSV 573

Query: 428 SLWGALLRACLEQGNIKLGNLAARRALELDPQNAGVFIMQSNLYAGLGLWNEIEHLREFV 468
            +WG+LL AC    NI LG   A + LE++P N+G +++ SN+YA LG W ++ ++R+ +
Sbjct: 574 -IWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSM 633

[Close]

BLAST of PI0023039.1 vs. ExPASy TrEMBL
Match: A0A1S3C6K8 (pentatricopeptide repeat-containing protein At2g13600-like OS=Cucumis melo OX=3656 GN=LOC103497272 PE=4 SV=1)

HSP 1 Score: 908.7 bits (2347), Expect = 1.0e-260
Identity = 442/469 (94.24%), Postives = 455/469 (97.01%), Query Frame = 0


Query: 1   MAIRSLDSLASFFRHSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSKFILSYSQIIPNFD 60
           M++RSLDS ASFF HSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSK ILSYSQIIPNFD
Sbjct: 1   MSMRSLDSFASFFGHSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFD 60

Query: 61  AQSLNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNG 120
           AQSLNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNG
Sbjct: 61  AQSLNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNG 120

Query: 121 CSFVQNVVYGKQIHAFVGKSGWFCSVFVGSTIVDMYAKNSLIYDAVEMFDEMPMKNTVCS 180
           CSFVQNVVYGKQIHAFVGKSGW CSVFVGS IVDMYAKNSLIYDAVE+FDEMPMKNTVC+
Sbjct: 121 CSFVQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCA 180

Query: 181 NALLAGYCEAKMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILR 240
           NALLAGY EA+MWVEGLELLRKMQGLDLKYDQFTLSASLRAC GLSAIALGKQ+HAYILR
Sbjct: 181 NALLAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACAGLSAIALGKQLHAYILR 240

Query: 241 TVYDITSDVHLQSSLLEMYGKNGMVEKAWNVFNFAGLGQQEDGKRDIIMWTSMLSVYGRN 300
           TVYDITSDVHLQS+L+EMYGKNGMVEKAWNVFNFAGLG +EDGKRDIIMWTSMLSVYGRN
Sbjct: 241 TVYDITSDVHLQSTLVEMYGKNGMVEKAWNVFNFAGLGHREDGKRDIIMWTSMLSVYGRN 300

Query: 301 GCYKRVIELYNQMLMEGIKPDRVAFVTVISACGYTGEVNLGVKYFDSMQSDFGLAPGQEH 360
           GCYKRVIELYNQMLMEGIKPDRVAFVTVISACG+TGEVNLGVKYFDSMQSDFGL PGQEH
Sbjct: 301 GCYKRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEH 360

Query: 361 YSCLVDLLCRAGELEKAWKLVNGIKSQDYNVSLWGALLRACLEQGNIKLGNLAARRALEL 420
           YSCL DLLCRAGELEKAWKLVN IKS+DYNVSLWGALLRACLEQGNIKLGNLAARRALEL
Sbjct: 361 YSCLADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALEL 420

Query: 421 DPQNAGVFIMQSNLYAGLGLWNEIEHLREFVRKERLHKDVGCSWIEITS 470
           DPQNAG+FIM SNLYAG GLWNEIEHLREFVRKE L+KDVGCSWIEITS
Sbjct: 421 DPQNAGIFIMLSNLYAGFGLWNEIEHLREFVRKEGLYKDVGCSWIEITS 469

[Close]

BLAST of PI0023039.1 vs. ExPASy TrEMBL
Match: A0A5D3BKX2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001930 PE=4 SV=1)

HSP 1 Score: 908.7 bits (2347), Expect = 1.0e-260
Identity = 442/469 (94.24%), Postives = 455/469 (97.01%), Query Frame = 0


Query: 1   MAIRSLDSLASFFRHSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSKFILSYSQIIPNFD 60
           M++RSLDS ASFF HSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSK ILSYSQIIPNFD
Sbjct: 1   MSMRSLDSFASFFGHSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFD 60

Query: 61  AQSLNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNG 120
           AQSLNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNG
Sbjct: 61  AQSLNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNG 120

Query: 121 CSFVQNVVYGKQIHAFVGKSGWFCSVFVGSTIVDMYAKNSLIYDAVEMFDEMPMKNTVCS 180
           CSFVQNVVYGKQIHAFVGKSGW CSVFVGS IVDMYAKNSLIYDAVE+FDEMPMKNTVC+
Sbjct: 121 CSFVQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCA 180

Query: 181 NALLAGYCEAKMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILR 240
           NALLAGY EA+MWVEGLELLRKMQGLDLKYDQFTLSASLRAC GLSAIALGKQ+HAYILR
Sbjct: 181 NALLAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACAGLSAIALGKQLHAYILR 240

Query: 241 TVYDITSDVHLQSSLLEMYGKNGMVEKAWNVFNFAGLGQQEDGKRDIIMWTSMLSVYGRN 300
           TVYDITSDVHLQS+L+EMYGKNGMVEKAWNVFNFAGLG +EDGKRDIIMWTSMLSVYGRN
Sbjct: 241 TVYDITSDVHLQSTLVEMYGKNGMVEKAWNVFNFAGLGHREDGKRDIIMWTSMLSVYGRN 300

Query: 301 GCYKRVIELYNQMLMEGIKPDRVAFVTVISACGYTGEVNLGVKYFDSMQSDFGLAPGQEH 360
           GCYKRVIELYNQMLMEGIKPDRVAFVTVISACG+TGEVNLGVKYFDSMQSDFGL PGQEH
Sbjct: 301 GCYKRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEH 360

Query: 361 YSCLVDLLCRAGELEKAWKLVNGIKSQDYNVSLWGALLRACLEQGNIKLGNLAARRALEL 420
           YSCL DLLCRAGELEKAWKLVN IKS+DYNVSLWGALLRACLEQGNIKLGNLAARRALEL
Sbjct: 361 YSCLADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALEL 420

Query: 421 DPQNAGVFIMQSNLYAGLGLWNEIEHLREFVRKERLHKDVGCSWIEITS 470
           DPQNAG+FIM SNLYAG GLWNEIEHLREFVRKE L+KDVGCSWIEITS
Sbjct: 421 DPQNAGIFIMLSNLYAGFGLWNEIEHLREFVRKEGLYKDVGCSWIEITS 469

[Close]

BLAST of PI0023039.1 vs. ExPASy TrEMBL
Match: A0A0A0LLD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258600 PE=4 SV=1)

HSP 1 Score: 892.9 bits (2306), Expect = 5.8e-256
Identity = 434/469 (92.54%), Postives = 449/469 (95.74%), Query Frame = 0


Query: 1   MAIRSLDSLASFFRHSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSKFILSYSQIIPNFD 60
           M+IRSLDS ASFF HSSQ KNLKTIKKIHAHLLRTHFQFFSPNLHSK ILSYSQIIPNFD
Sbjct: 1   MSIRSLDSFASFFHHSSQFKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFD 60

Query: 61  AQSLNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNG 120
           A+SLN IF+CIIPRTSLTFNVMISDFSRHGF DFALMGFSFMHSNGVPIDTYALCSSLNG
Sbjct: 61  AKSLNGIFQCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNG 120

Query: 121 CSFVQNVVYGKQIHAFVGKSGWFCSVFVGSTIVDMYAKNSLIYDAVEMFDEMPMKNTVCS 180
           CSFVQNVVYGKQIHAFVGKSGW CSVFVGS IVDMYAKNSLIYDAVE+FDEMPMKNTVC+
Sbjct: 121 CSFVQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCA 180

Query: 181 NALLAGYCEAKMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILR 240
           NALLAGY EA+MWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILR
Sbjct: 181 NALLAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILR 240

Query: 241 TVYDITSDVHLQSSLLEMYGKNGMVEKAWNVFNFAGLGQQEDGKRDIIMWTSMLSVYGRN 300
           TVYDITSDVHLQS+L+EMYGKNGMVEKAWNVF FAGLG+QEDGKRDIIMWTSMLSVYGRN
Sbjct: 241 TVYDITSDVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYGRN 300

Query: 301 GCYKRVIELYNQMLMEGIKPDRVAFVTVISACGYTGEVNLGVKYFDSMQSDFGLAPGQEH 360
           GCYKRVIELYNQMLMEGIKPDRVAFVTVISACG+TGEVNLGV+YFDSMQSDFGL PGQEH
Sbjct: 301 GCYKRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVQYFDSMQSDFGLEPGQEH 360

Query: 361 YSCLVDLLCRAGELEKAWKLVNGIKSQDYNVSLWGALLRACLEQGNIKLGNLAARRALEL 420
           YSCL DLLCRAGELEKAWKLVN IKS+DYNVSLWGALLRACLEQGNIKLGNLAARRALEL
Sbjct: 361 YSCLADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALEL 420

Query: 421 DPQNAGVFIMQSNLYAGLGLWNEIEHLREFVRKERLHKDVGCSWIEITS 470
           DPQN G+ +M SNLYAG GLWNEIEHLRE VRKE L+KDV CSWIEITS
Sbjct: 421 DPQNTGILVMLSNLYAGFGLWNEIEHLRESVRKEGLYKDVACSWIEITS 469

[Close]

BLAST of PI0023039.1 vs. ExPASy TrEMBL
Match: A0A6J1FYF9 (pentatricopeptide repeat-containing protein At1g50270-like OS=Cucurbita moschata OX=3662 GN=LOC111448605 PE=4 SV=1)

HSP 1 Score: 825.1 bits (2130), Expect = 1.5e-235
Identity = 399/466 (85.62%), Postives = 430/466 (92.27%), Query Frame = 0


Query: 4   RSLDSLASFFRHSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSKFILSYSQIIPNFDAQS 63
           RSLDS ASF RH+SQI+NLK IKK+HA LLRTHFQF SP+LHSK ILSYSQIIPNFDA S
Sbjct: 11  RSLDSFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYSQIIPNFDALS 70

Query: 64  LNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNGCSF 123
           L+S FKCIIPR+SLTFNVMISDF RHGFPDF+LM  SFMHSNGVPIDTYALCSSL+ CS 
Sbjct: 71  LSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYALCSSLSACSL 130

Query: 124 VQNVVYGKQIHAFVGKSGWFCSVFVGSTIVDMYAKNSLIYDAVEMFDEMPMKNTVCSNAL 183
           VQN VYGKQ+HAFVGKSGW CSVFVGS IVDMYAKNSLI DAV++FDE+P+KNTVC+NAL
Sbjct: 131 VQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANAL 190

Query: 184 LAGYCEAKMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVY 243
           LAGY +A MW++GLELLRKM  LDLKYDQFTLSASLRACTGLSAIALGKQVHAY+LRTVY
Sbjct: 191 LAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQVHAYLLRTVY 250

Query: 244 DITSDVHLQSSLLEMYGKNGMVEKAWNVFNFAGLGQQEDGKRDIIMWTSMLSVYGRNGCY 303
           DI+SDVHLQS+L+EMYGK+GMVEKAWNVF FAGLGQ+EDGKRDIIMWTSMLS YGRNGCY
Sbjct: 251 DISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSMLSAYGRNGCY 310

Query: 304 KRVIELYNQMLMEGIKPDRVAFVTVISACGYTGEVNLGVKYFDSMQSDFGLAPGQEHYSC 363
            RVIELYNQMLMEGIKPDRVAFVTVISACG+TG+VNLGVKYFDSMQS FGL PGQEHYSC
Sbjct: 311 IRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPGQEHYSC 370

Query: 364 LVDLLCRAGELEKAWKLVNGIKSQDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQ 423
           LVDLLCRAGELEKAWKLV+G+KS DYNV LWGALLRACLE GNIKLGNLAARRALELDP 
Sbjct: 371 LVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLAARRALELDPT 430

Query: 424 NAGVFIMQSNLYAGLGLWNEIEHLREFVRKERLHKDVGCSWIEITS 470
           NAG+F+M SNLY+G GLWNEIEHLR FVR+E LHK VGCSWIE TS
Sbjct: 431 NAGIFVMLSNLYSGFGLWNEIEHLRGFVRREGLHKGVGCSWIETTS 476

[Close]

BLAST of PI0023039.1 vs. ExPASy TrEMBL
Match: A0A6J1CYG8 (pentatricopeptide repeat-containing protein At4g21300-like OS=Momordica charantia OX=3673 GN=LOC111015438 PE=4 SV=1)

HSP 1 Score: 778.5 bits (2009), Expect = 1.6e-221
Identity = 375/466 (80.47%), Postives = 421/466 (90.34%), Query Frame = 0


Query: 4   RSLDSLASFFRHSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSKFILSYSQIIPNFDAQS 63
           +SLD  +SF RHS++ KNL  IKK+HAHL+RTHFQFFSP+LH+K ILSYS+  PNF AQS
Sbjct: 11  QSLDFFSSFLRHSTETKNLTPIKKLHAHLIRTHFQFFSPSLHTKLILSYSRANPNFGAQS 70

Query: 64  LNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNGCSF 123
           L+S+FK IIPR+SLTFN++I+DF R+G  DFALM FSFMHSNGVPID+YALCS+L+ CS 
Sbjct: 71  LSSLFKFIIPRSSLTFNIIIADFCRNGSADFALMAFSFMHSNGVPIDSYALCSTLSACSL 130

Query: 124 VQNVVYGKQIHAFVGKSGWFCSVFVGSTIVDMYAKNSLIYDAVEMFDEMPMKNTVCSNAL 183
           VQNV++GKQ+HAFVGKSGW  SVFVGS IVD+YAKN LI DAVE+FDE+PMKNTVC+NAL
Sbjct: 131 VQNVMFGKQMHAFVGKSGWLSSVFVGSAIVDLYAKNGLIGDAVEVFDEIPMKNTVCANAL 190

Query: 184 LAGYCEAKMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVY 243
           LAGY EAKMWVEGLELLRKM  LDLKYD FTLSASLR C  LSAIALGKQVHAY+LR +Y
Sbjct: 191 LAGYGEAKMWVEGLELLRKMYVLDLKYDHFTLSASLRTCACLSAIALGKQVHAYLLRMIY 250

Query: 244 DITSDVHLQSSLLEMYGKNGMVEKAWNVFNFAGLGQQEDGKRDIIMWTSMLSVYGRNGCY 303
           DI SDVHLQS+L+EMYGK+GMVEKAWNVFNFAGL Q+EDGKRDII+WTS+LSVYGRNGCY
Sbjct: 251 DIPSDVHLQSTLIEMYGKSGMVEKAWNVFNFAGLEQKEDGKRDIIVWTSILSVYGRNGCY 310

Query: 304 KRVIELYNQMLMEGIKPDRVAFVTVISACGYTGEVNLGVKYFDSMQSDFGLAPGQEHYSC 363
           KRVIELY+QMLMEGIKPDRVAFVTVISACG+TGEV+LG+KYFDSMQSDFGL PGQEHYSC
Sbjct: 311 KRVIELYSQMLMEGIKPDRVAFVTVISACGHTGEVDLGIKYFDSMQSDFGLQPGQEHYSC 370

Query: 364 LVDLLCRAGELEKAWKLVNGIKSQDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQ 423
           LVDLLCRAGEL+KAWKLVN +KSQ  NVSLWGALLRACLE G I+LGNLAA++ALELDPQ
Sbjct: 371 LVDLLCRAGELDKAWKLVNDMKSQHCNVSLWGALLRACLEHGKIELGNLAAQKALELDPQ 430

Query: 424 NAGVFIMQSNLYAGLGLWNEIEHLREFVRKERLHKDVGCSWIEITS 470
           N G+F+M SNLYA  GLWNEIEHLREFV KE + KDVGCSWIEITS
Sbjct: 431 NTGIFVMLSNLYAIFGLWNEIEHLREFVSKEGMCKDVGCSWIEITS 476

[Close]

BLAST of PI0023039.1 vs. NCBI nr
Match: XP_008457622.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis melo] >XP_008457623.1 PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis melo] >XP_016902170.1 PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis melo] >KAA0045664.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ99619.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 908.7 bits (2347), Expect = 2.1e-260
Identity = 442/469 (94.24%), Postives = 455/469 (97.01%), Query Frame = 0


Query: 1   MAIRSLDSLASFFRHSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSKFILSYSQIIPNFD 60
           M++RSLDS ASFF HSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSK ILSYSQIIPNFD
Sbjct: 1   MSMRSLDSFASFFGHSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFD 60

Query: 61  AQSLNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNG 120
           AQSLNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNG
Sbjct: 61  AQSLNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNG 120

Query: 121 CSFVQNVVYGKQIHAFVGKSGWFCSVFVGSTIVDMYAKNSLIYDAVEMFDEMPMKNTVCS 180
           CSFVQNVVYGKQIHAFVGKSGW CSVFVGS IVDMYAKNSLIYDAVE+FDEMPMKNTVC+
Sbjct: 121 CSFVQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCA 180

Query: 181 NALLAGYCEAKMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILR 240
           NALLAGY EA+MWVEGLELLRKMQGLDLKYDQFTLSASLRAC GLSAIALGKQ+HAYILR
Sbjct: 181 NALLAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACAGLSAIALGKQLHAYILR 240

Query: 241 TVYDITSDVHLQSSLLEMYGKNGMVEKAWNVFNFAGLGQQEDGKRDIIMWTSMLSVYGRN 300
           TVYDITSDVHLQS+L+EMYGKNGMVEKAWNVFNFAGLG +EDGKRDIIMWTSMLSVYGRN
Sbjct: 241 TVYDITSDVHLQSTLVEMYGKNGMVEKAWNVFNFAGLGHREDGKRDIIMWTSMLSVYGRN 300

Query: 301 GCYKRVIELYNQMLMEGIKPDRVAFVTVISACGYTGEVNLGVKYFDSMQSDFGLAPGQEH 360
           GCYKRVIELYNQMLMEGIKPDRVAFVTVISACG+TGEVNLGVKYFDSMQSDFGL PGQEH
Sbjct: 301 GCYKRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEH 360

Query: 361 YSCLVDLLCRAGELEKAWKLVNGIKSQDYNVSLWGALLRACLEQGNIKLGNLAARRALEL 420
           YSCL DLLCRAGELEKAWKLVN IKS+DYNVSLWGALLRACLEQGNIKLGNLAARRALEL
Sbjct: 361 YSCLADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALEL 420

Query: 421 DPQNAGVFIMQSNLYAGLGLWNEIEHLREFVRKERLHKDVGCSWIEITS 470
           DPQNAG+FIM SNLYAG GLWNEIEHLREFVRKE L+KDVGCSWIEITS
Sbjct: 421 DPQNAGIFIMLSNLYAGFGLWNEIEHLREFVRKEGLYKDVGCSWIEITS 469

[Close]

BLAST of PI0023039.1 vs. NCBI nr
Match: XP_038901137.1 (pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida] >XP_038901138.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida] >XP_038901139.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida] >XP_038901140.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida] >XP_038901141.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida] >XP_038901143.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 857.1 bits (2213), Expect = 7.3e-245
Identity = 419/466 (89.91%), Postives = 435/466 (93.35%), Query Frame = 0


Query: 4   RSLDSLASFFRHSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSKFILSYSQIIPNFDAQS 63
           RSLDS ASFFRHS Q KNLK IK+IHAHLLRT FQFFSPNLHSK ILSYSQI PNFDAQS
Sbjct: 11  RSLDSFASFFRHSCQSKNLKAIKRIHAHLLRTRFQFFSPNLHSKLILSYSQINPNFDAQS 70

Query: 64  LNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNGCSF 123
           LNSIFKCIIPR SL FNV+ISDFSRHGFPDFALM FSFMHSNGVPIDTYALCSSL  CS 
Sbjct: 71  LNSIFKCIIPRRSLNFNVIISDFSRHGFPDFALMAFSFMHSNGVPIDTYALCSSLTSCSL 130

Query: 124 VQNVVYGKQIHAFVGKSGWFCSVFVGSTIVDMYAKNSLIYDAVEMFDEMPMKNTVCSNAL 183
           VQN VYGKQIHAFVGKSGW CSVFVGS IVDMYAKNSLI DAVE+FDE+PMKNTVC+NAL
Sbjct: 131 VQNGVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVEVFDEIPMKNTVCANAL 190

Query: 184 LAGYCEAKMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVY 243
           LAGY EA+MWVEGLELLR+MQ LDLKYDQFTLSASLRAC GLSAIALGKQVHAY+LRTVY
Sbjct: 191 LAGYGEARMWVEGLELLREMQALDLKYDQFTLSASLRACAGLSAIALGKQVHAYLLRTVY 250

Query: 244 DITSDVHLQSSLLEMYGKNGMVEKAWNVFNFAGLGQQEDGKRDIIMWTSMLSVYGRNGCY 303
           DIT DVHLQS+L+EMYGK+GMVEKAWNVFNFAGL Q+EDGKRDIIMWTSMLSVYGRNGCY
Sbjct: 251 DITCDVHLQSTLIEMYGKSGMVEKAWNVFNFAGLRQKEDGKRDIIMWTSMLSVYGRNGCY 310

Query: 304 KRVIELYNQMLMEGIKPDRVAFVTVISACGYTGEVNLGVKYFDSMQSDFGLAPGQEHYSC 363
           KRVIELYNQMLMEG KPDRVAFVTVISACG+TGEVNLGVKYFDSMQSDFGL PGQEHYSC
Sbjct: 311 KRVIELYNQMLMEGNKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEHYSC 370

Query: 364 LVDLLCRAGELEKAWKLVNGIKSQDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQ 423
           LVDLLCRAGELEKAWKLVN IKS DYNVSLWGALLRACLEQGNIKLGNLAA RALELDPQ
Sbjct: 371 LVDLLCRAGELEKAWKLVNDIKSWDYNVSLWGALLRACLEQGNIKLGNLAAHRALELDPQ 430

Query: 424 NAGVFIMQSNLYAGLGLWNEIEHLREFVRKERLHKDVGCSWIEITS 470
           NAG+F+M SNLYAG GLWNEIE LREFVRKE L+KDVGCSWIEITS
Sbjct: 431 NAGIFVMLSNLYAGFGLWNEIERLREFVRKEGLYKDVGCSWIEITS 476

[Close]

BLAST of PI0023039.1 vs. NCBI nr
Match: KAG6571067.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 827.8 bits (2137), Expect = 4.7e-236
Identity = 400/466 (85.84%), Postives = 431/466 (92.49%), Query Frame = 0


Query: 4   RSLDSLASFFRHSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSKFILSYSQIIPNFDAQS 63
           RSLDS ASF RH+SQI+NLK IKK+HA LLRTHFQF SP+LHSK ILSYSQIIPNFDA S
Sbjct: 11  RSLDSFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYSQIIPNFDALS 70

Query: 64  LNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNGCSF 123
           L+S FKCIIPR+SLTFNVMISDF RHGFPDF+LM  SFMHSNGVPIDTYALCSSL+ CS 
Sbjct: 71  LSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYALCSSLSACSL 130

Query: 124 VQNVVYGKQIHAFVGKSGWFCSVFVGSTIVDMYAKNSLIYDAVEMFDEMPMKNTVCSNAL 183
           VQN VYGKQ+HAFVGKSGW CSVFVGS IVDMYAKNSLI DAV++FDE+P+KNTVC+NAL
Sbjct: 131 VQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANAL 190

Query: 184 LAGYCEAKMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVY 243
           LAGY +A MW++GLELLRKM  LDLKYDQFTLSASLRACTGLSAIALGKQVHAY+LRTVY
Sbjct: 191 LAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQVHAYLLRTVY 250

Query: 244 DITSDVHLQSSLLEMYGKNGMVEKAWNVFNFAGLGQQEDGKRDIIMWTSMLSVYGRNGCY 303
           DI+SDVHLQS+L+EMYGK+GMVEKAWNVF FAGLGQ+EDGKRDIIMWTSMLS YGRNGCY
Sbjct: 251 DISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSMLSAYGRNGCY 310

Query: 304 KRVIELYNQMLMEGIKPDRVAFVTVISACGYTGEVNLGVKYFDSMQSDFGLAPGQEHYSC 363
            RVIELYNQMLMEGIKPDRVAFVTVISACG+TG+VNLGVKYFDSMQS FGL PGQEHYSC
Sbjct: 311 IRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPGQEHYSC 370

Query: 364 LVDLLCRAGELEKAWKLVNGIKSQDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQ 423
           LVDLLCRAGELEKAWKLV+G+KS DYNV LWGALLRACLE GNIKLGNLAARRALELDP 
Sbjct: 371 LVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLAARRALELDPT 430

Query: 424 NAGVFIMQSNLYAGLGLWNEIEHLREFVRKERLHKDVGCSWIEITS 470
           NAG+F+M SNLY+G GLWNEIEHLREFVR+E LHK VGCSWIE TS
Sbjct: 431 NAGIFVMLSNLYSGFGLWNEIEHLREFVRREGLHKGVGCSWIETTS 476

[Close]

BLAST of PI0023039.1 vs. NCBI nr
Match: XP_022944055.1 (pentatricopeptide repeat-containing protein At1g50270-like [Cucurbita moschata] >KAG7010880.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 825.1 bits (2130), Expect = 3.1e-235
Identity = 399/466 (85.62%), Postives = 430/466 (92.27%), Query Frame = 0


Query: 4   RSLDSLASFFRHSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSKFILSYSQIIPNFDAQS 63
           RSLDS ASF RH+SQI+NLK IKK+HA LLRTHFQF SP+LHSK ILSYSQIIPNFDA S
Sbjct: 11  RSLDSFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYSQIIPNFDALS 70

Query: 64  LNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNGCSF 123
           L+S FKCIIPR+SLTFNVMISDF RHGFPDF+LM  SFMHSNGVPIDTYALCSSL+ CS 
Sbjct: 71  LSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYALCSSLSACSL 130

Query: 124 VQNVVYGKQIHAFVGKSGWFCSVFVGSTIVDMYAKNSLIYDAVEMFDEMPMKNTVCSNAL 183
           VQN VYGKQ+HAFVGKSGW CSVFVGS IVDMYAKNSLI DAV++FDE+P+KNTVC+NAL
Sbjct: 131 VQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANAL 190

Query: 184 LAGYCEAKMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVY 243
           LAGY +A MW++GLELLRKM  LDLKYDQFTLSASLRACTGLSAIALGKQVHAY+LRTVY
Sbjct: 191 LAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQVHAYLLRTVY 250

Query: 244 DITSDVHLQSSLLEMYGKNGMVEKAWNVFNFAGLGQQEDGKRDIIMWTSMLSVYGRNGCY 303
           DI+SDVHLQS+L+EMYGK+GMVEKAWNVF FAGLGQ+EDGKRDIIMWTSMLS YGRNGCY
Sbjct: 251 DISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSMLSAYGRNGCY 310

Query: 304 KRVIELYNQMLMEGIKPDRVAFVTVISACGYTGEVNLGVKYFDSMQSDFGLAPGQEHYSC 363
            RVIELYNQMLMEGIKPDRVAFVTVISACG+TG+VNLGVKYFDSMQS FGL PGQEHYSC
Sbjct: 311 IRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPGQEHYSC 370

Query: 364 LVDLLCRAGELEKAWKLVNGIKSQDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQ 423
           LVDLLCRAGELEKAWKLV+G+KS DYNV LWGALLRACLE GNIKLGNLAARRALELDP 
Sbjct: 371 LVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLAARRALELDPT 430

Query: 424 NAGVFIMQSNLYAGLGLWNEIEHLREFVRKERLHKDVGCSWIEITS 470
           NAG+F+M SNLY+G GLWNEIEHLR FVR+E LHK VGCSWIE TS
Sbjct: 431 NAGIFVMLSNLYSGFGLWNEIEHLRGFVRREGLHKGVGCSWIETTS 476

[Close]

BLAST of PI0023039.1 vs. NCBI nr
Match: XP_023512242.1 (pentatricopeptide repeat-containing protein At2g13600-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 816.6 bits (2108), Expect = 1.1e-232
Identity = 394/466 (84.55%), Postives = 429/466 (92.06%), Query Frame = 0


Query: 4   RSLDSLASFFRHSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSKFILSYSQIIPNFDAQS 63
           RSLDS ASF RHSSQI+NLK IKK+HA LLRTHFQF SP+LHSK ILSYSQI+PNFDAQS
Sbjct: 24  RSLDSFASFLRHSSQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYSQIVPNFDAQS 83

Query: 64  LNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNGCSF 123
           L+S FKCIIPR+SLTFNVMISDF RHGFPDF+L+  SFMHSNGVPIDTYALCSSL+ CS 
Sbjct: 84  LSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLIALSFMHSNGVPIDTYALCSSLSACSL 143

Query: 124 VQNVVYGKQIHAFVGKSGWFCSVFVGSTIVDMYAKNSLIYDAVEMFDEMPMKNTVCSNAL 183
           VQN VYG+Q+HAFVGKSGW CSVFVGS IVDMYAKNSLI DAV++FDE+P+KNTVC+NAL
Sbjct: 144 VQNAVYGQQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANAL 203

Query: 184 LAGYCEAKMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVY 243
           LAGY +A MW++GLELLRKM  L+LKYDQFTLSASLRACTGLSAIALGKQVHAY+LRTVY
Sbjct: 204 LAGYGDAGMWIDGLELLRKMHVLNLKYDQFTLSASLRACTGLSAIALGKQVHAYLLRTVY 263

Query: 244 DITSDVHLQSSLLEMYGKNGMVEKAWNVFNFAGLGQQEDGKRDIIMWTSMLSVYGRNGCY 303
           DI+SDVHLQS+L+EMYGK+GMVEKAWNVF FAGLG +EDGKRDIIMWTSMLS YGRNGCY
Sbjct: 264 DISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGHKEDGKRDIIMWTSMLSAYGRNGCY 323

Query: 304 KRVIELYNQMLMEGIKPDRVAFVTVISACGYTGEVNLGVKYFDSMQSDFGLAPGQEHYSC 363
            RVIELYNQMLMEGIKPDRVAFVTVISACG+TG+VNLGVKYFDSMQS FGL PGQEHYSC
Sbjct: 324 IRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPGQEHYSC 383

Query: 364 LVDLLCRAGELEKAWKLVNGIKSQDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQ 423
           LVDLLCRAGEL+KAWKLV+ IKS D+NV LWGALLRACLE GNIKLGNLAAR ALELDP 
Sbjct: 384 LVDLLCRAGELDKAWKLVSDIKSSDHNVPLWGALLRACLEHGNIKLGNLAARMALELDPT 443

Query: 424 NAGVFIMQSNLYAGLGLWNEIEHLREFVRKERLHKDVGCSWIEITS 470
           NAG+F+M SNLYAG GLWNEIEHLREFVR+E L+K VGCSWIE TS
Sbjct: 444 NAGIFVMLSNLYAGFGLWNEIEHLREFVRREGLYKGVGCSWIETTS 489

[Close]

BLAST of PI0023039.1 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 255.4 bits (651), Expect = 9.1e-68
Identity = 130/409 (31.78%), Postives = 234/409 (57.21%), Query Frame = 0


Query: 60  DAQSLNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLN 119
           D  S  ++F+ +  R+ +++  MI+ ++R G    A+  F  M   G+  D Y + + LN
Sbjct: 346 DLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 405

Query: 120 GCSFVQNVVYGKQIHAFVGKSGWFCSVFVGSTIVDMYAKNSLIYDAVEMFDEMPMKNTVC 179
            C+  + +  GK++H ++ ++     +FV + ++DMYAK   + +A  +F EM +K+ + 
Sbjct: 406 CCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS 465

Query: 180 SNALLAGYCEAKMWVEGLELLR-KMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYI 239
            N ++ GY +     E L L    ++      D+ T++  L AC  LSA   G+++H YI
Sbjct: 466 WNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYI 525

Query: 240 LRTVYDITSDVHLQSSLLEMYGKNGMVEKAWNVFNFAGLGQQEDGKRDIIMWTSMLSVYG 299
           +R  Y   SD H+ +SL++MY K G +  A  +F+       +   +D++ WT M++ YG
Sbjct: 526 MRNGY--FSDRHVANSLVDMYAKCGALLLAHMLFD-------DIASKDLVSWTVMIAGYG 585

Query: 300 RNGCYKRVIELYNQMLMEGIKPDRVAFVTVISACGYTGEVNLGVKYFDSMQSDFGLAPGQ 359
            +G  K  I L+NQM   GI+ D ++FV+++ AC ++G V+ G ++F+ M+ +  + P  
Sbjct: 586 MHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTV 645

Query: 360 EHYSCLVDLLCRAGELEKAWKLVNGIKSQDYNVSLWGALLRACLEQGNIKLGNLAARRAL 419
           EHY+C+VD+L R G+L KA++ +  +     + ++WGALL  C    ++KL    A +  
Sbjct: 646 EHYACIVDMLARTGDLIKAYRFIENMPIPP-DATIWGALLCGCRIHHDVKLAEKVAEKVF 705

Query: 420 ELDPQNAGVFIMQSNLYAGLGLWNEIEHLREFVRKERLHKDVGCSWIEI 468
           EL+P+N G +++ +N+YA    W +++ LR+ + +  L K+ GCSWIEI
Sbjct: 706 ELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEI 744

[Close]

BLAST of PI0023039.1 vs. TAIR 10
Match: AT5G04780.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 255.0 bits (650), Expect = 1.2e-67
Identity = 134/401 (33.42%), Postives = 244/401 (60.85%), Query Frame = 0


Query: 67  IFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNGCSFVQN 126
           +F  ++ R+ +++N MI  ++R+     AL  F  M + G     + + S L+ C    +
Sbjct: 118 VFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCD 177

Query: 127 VVYGKQIHAFVGKSGWFCSVFVGSTIVDMYAKNSLIYDAVEMFDEMPMKNTVCSNALLAG 186
            +  K++H    K+    +++VG+ ++D+YAK  +I DAV++F+ M  K++V  ++++AG
Sbjct: 178 ALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAG 237

Query: 187 YCEAKMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVYDIT 246
           Y + K + E L L R+ Q + L+ +QFTLS+ + AC+ L+A+  GKQ+HA I ++ +   
Sbjct: 238 YVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFG-- 297

Query: 247 SDVHLQSSLLEMYGKNGMVEKAWNVFNFAGLGQQEDGKRDIIMWTSMLSVYGRNGCYKRV 306
           S+V + SS ++MY K G + +++ +F+       E  ++++ +W +++S + ++   K V
Sbjct: 298 SNVFVASSAVDMYAKCGSLRESYIIFS-------EVQEKNLELWNTIISGFAKHARPKEV 357

Query: 307 IELYNQMLMEGIKPDRVAFVTVISACGYTGEVNLGVKYFDSMQSDFGLAPGQEHYSCLVD 366
           + L+ +M  +G+ P+ V F +++S CG+TG V  G ++F  M++ +GL+P   HYSC+VD
Sbjct: 358 MILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVD 417

Query: 367 LLCRAGELEKAWKLVNGIKSQDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQNAG 426
           +L RAG L +A++L+  I   D   S+WG+LL +C    N++L  +AA +  EL+P+NAG
Sbjct: 418 ILGRAGLLSEAYELIKSIPF-DPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAG 477

Query: 427 VFIMQSNLYAGLGLWNEIEHLREFVRKERLHKDVGCSWIEI 468
             ++ SN+YA    W EI   R+ +R   + K  G SWI+I
Sbjct: 478 NHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDI 508

[Close]

BLAST of PI0023039.1 vs. TAIR 10
Match: AT1G18485.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 250.8 bits (639), Expect = 2.2e-66
Identity = 134/446 (30.04%), Postives = 251/446 (56.28%), Query Frame = 0


Query: 22  LKTIKKIHAHLLRTHFQFFSPNLHSKFILSYSQIIPNFDAQSLNSIFKCIIPRTSLTFNV 81
           L ++K++H + L+  F  ++  + + F+ SY++      AQ    +F  I  +T  ++N 
Sbjct: 411 LPSLKELHCYSLKQEF-VYNELVANAFVASYAKCGSLSYAQ---RVFHGIRSKTVNSWNA 470

Query: 82  MISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNGCSFVQNVVYGKQIHAFVGKSG 141
           +I   ++   P  +L     M  +G+  D++ +CS L+ CS ++++  GK++H F+ ++ 
Sbjct: 471 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 530

Query: 142 WFCSVFVGSTIVDMYAKNSLIYDAVEMFDEMPMKNTVCSNALLAGYCEAKMWVEGLELLR 201
               +FV  +++ +Y     +     +FD M  K+ V  N ++ GY +       L + R
Sbjct: 531 LERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFR 590

Query: 202 KMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVYDITSDVHLQSSLLEMYGK 261
           +M    ++    ++     AC+ L ++ LG++ HAY L+ +  +  D  +  SL++MY K
Sbjct: 591 QMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHL--LEDDAFIACSLIDMYAK 650

Query: 262 NGMVEKAWNVFNFAGLGQQEDGKRDIIMWTSMLSVYGRNGCYKRVIELYNQMLMEGIKPD 321
           NG + ++  VFN  GL ++         W +M+  YG +G  K  I+L+ +M   G  PD
Sbjct: 651 NGSITQSSKVFN--GLKEKSTAS-----WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPD 710

Query: 322 RVAFVTVISACGYTGEVNLGVKYFDSMQSDFGLAPGQEHYSCLVDLLCRAGELEKAWKLV 381
            + F+ V++AC ++G ++ G++Y D M+S FGL P  +HY+C++D+L RAG+L+KA ++V
Sbjct: 711 DLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVV 770

Query: 382 NGIKSQDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQNAGVFIMQSNLYAGLGLW 441
               S++ +V +W +LL +C    N+++G   A +  EL+P+    +++ SNLYAGLG W
Sbjct: 771 AEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKW 830

Query: 442 NEIEHLREFVRKERLHKDVGCSWIEI 468
            ++  +R+ + +  L KD GCSWIE+
Sbjct: 831 EDVRKVRQRMNEMSLRKDAGCSWIEL 843

[Close]

BLAST of PI0023039.1 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 249.6 bits (636), Expect = 5.0e-66
Identity = 139/440 (31.59%), Postives = 230/440 (52.27%), Query Frame = 0


Query: 60  DAQSLNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLN 119
           D  S   +F  I  +  +++N MI+ F + G PD AL  F  M S  V      +   L+
Sbjct: 181 DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLS 240

Query: 120 GCSFVQNVVYGKQIHAFVGKSGWFCSVFVGSTIVDMYAKNSLIYDAVEMFDEMPMKNTVC 179
            C+ ++N+ +G+Q+ +++ ++    ++ + + ++DMY K   I DA  +FD M  K+ V 
Sbjct: 241 ACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVT 300

Query: 180 SNALLAGYCEAKMWVEGLELLRKMQGLD-------------------------------- 239
              +L GY  ++ +    E+L  M   D                                
Sbjct: 301 WTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKN 360

Query: 240 LKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVYDITSDVHLQSSLLEMYGKNGMVEK 299
           +K +Q TL ++L AC  + A+ LG+ +H+YI +  + I  + H+ S+L+ MY K G +EK
Sbjct: 361 MKLNQITLVSTLSACAQVGALELGRWIHSYIKK--HGIRMNFHVTSALIHMYSKCGDLEK 420

Query: 300 AWNVFNFAGLGQQEDGKRDIIMWTSMLSVYGRNGCYKRVIELYNQMLMEGIKPDRVAFVT 359
           +  VFN          KRD+ +W++M+     +GC    ++++ +M    +KP+ V F  
Sbjct: 421 SREVFNSV-------EKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTN 480

Query: 360 VISACGYTGEVNLGVKYFDSMQSDFGLAPGQEHYSCLVDLLCRAGELEKAWKLVNGIKSQ 419
           V  AC +TG V+     F  M+S++G+ P ++HY+C+VD+L R+G LEKA K +  +   
Sbjct: 481 VFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIP 540

Query: 420 DYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQNAGVFIMQSNLYAGLGLWNEIEHL 468
             + S+WGALL AC    N+ L  +A  R LEL+P+N G  ++ SN+YA LG W  +  L
Sbjct: 541 P-STSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSEL 600

[Close]

BLAST of PI0023039.1 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 247.3 bits (630), Expect = 2.5e-65
Identity = 155/496 (31.25%), Postives = 260/496 (52.42%), Query Frame = 0


Query: 8   SLASFFRHSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSKFILSYSQIIPNFDAQSLNSI 67
           S AS     S + ++    ++H+ + ++ F      + S  +  YS+     DAQ    +
Sbjct: 154 SFASVLSACSGLNDMNKGVQVHSLIAKSPF-LSDVYIGSALVDMYSKCGNVNDAQ---RV 213

Query: 68  FKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNGCSFVQNV 127
           F  +  R  +++N +I+ F ++G    AL  F  M  + V  D   L S ++ C+ +  +
Sbjct: 214 FDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAI 273

Query: 128 VYGKQIHAFVGKSGWFCS-VFVGSTIVDMYAKNSLIYDAVEMFDEMPMKNTVCS------ 187
             G+++H  V K+    + + + +  VDMYAK S I +A  +FD MP++N +        
Sbjct: 274 KVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISG 333

Query: 188 -------------------------NALLAGYCEAKMWVEGLELLRKMQGLDLKYDQFTL 247
                                    NAL+AGY +     E L L   ++   +    ++ 
Sbjct: 334 YAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSF 393

Query: 248 SASLRACTGLSAIALGKQVHAYILRTVYDITS----DVHLQSSLLEMYGKNGMVEKAWNV 307
           +  L+AC  L+ + LG Q H ++L+  +   S    D+ + +SL++MY K G VE+ + V
Sbjct: 394 ANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLV 453

Query: 308 FNFAGLGQQEDGKRDIIMWTSMLSVYGRNGCYKRVIELYNQMLMEGIKPDRVAFVTVISA 367
           F       ++  +RD + W +M+  + +NG     +EL+ +ML  G KPD +  + V+SA
Sbjct: 454 F-------RKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSA 513

Query: 368 CGYTGEVNLGVKYFDSMQSDFGLAPGQEHYSCLVDLLCRAGELEKAWKLVNGIKSQDYNV 427
           CG+ G V  G  YF SM  DFG+AP ++HY+C+VDLL RAG LE+A  ++  +  Q  +V
Sbjct: 514 CGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSV 573

Query: 428 SLWGALLRACLEQGNIKLGNLAARRALELDPQNAGVFIMQSNLYAGLGLWNEIEHLREFV 468
            +WG+LL AC    NI LG   A + LE++P N+G +++ SN+YA LG W ++ ++R+ +
Sbjct: 574 -IWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSM 633

The following BLAST results are available for this feature:

BLAST of PI0023039.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SN39	1.3e-66	31.78	Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t...	[more]
Q9LZ19	1.7e-66	33.42	Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidop...	[more]
Q0WN60	3.1e-65	30.04	Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX...	[more]
O82380	7.0e-65	31.59	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
Q9SIT7	3.5e-64	31.25	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]

BLAST of PI0023039.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C6K8	1.0e-260	94.24	pentatricopeptide repeat-containing protein At2g13600-like OS=Cucumis melo OX=36...	[more]
A0A5D3BKX2	1.0e-260	94.24	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0LLD6	5.8e-256	92.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258600 PE=4 SV=1	[more]
A0A6J1FYF9	1.5e-235	85.62	pentatricopeptide repeat-containing protein At1g50270-like OS=Cucurbita moschata...	[more]
A0A6J1CYG8	1.6e-221	80.47	pentatricopeptide repeat-containing protein At4g21300-like OS=Momordica charanti...	[more]

BLAST of PI0023039.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457622.1	2.1e-260	94.24	PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis m...	[more]
XP_038901137.1	7.3e-245	89.91	pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benin...	[more]
KAG6571067.1	4.7e-236	85.84	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022944055.1	3.1e-235	85.62	pentatricopeptide repeat-containing protein At1g50270-like [Cucurbita moschata] ...	[more]
XP_023512242.1	1.1e-232	84.55	pentatricopeptide repeat-containing protein At2g13600-like [Cucurbita pepo subsp...	[more]

BLAST of PI0023039.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18750.1	9.1e-68	31.78	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G04780.1	1.2e-67	33.42	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G18485.1	2.2e-66	30.04	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G29760.1	5.0e-66	31.59	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G13600.1	2.5e-65	31.25	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 150..175 e-value: 0.0096 score: 16.1 coord: 253..273 e-value: 0.041 score: 14.1 coord: 78..107 e-value: 0.0046 score: 17.1 coord: 179..205 e-value: 8.4E-4 score: 19.4
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 353..382 e-value: 1.5E-5 score: 24.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 286..332 e-value: 2.6E-8 score: 33.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 288..321 e-value: 2.9E-8 score: 31.4 coord: 181..211 e-value: 1.3E-4 score: 19.9 coord: 361..389 e-value: 5.6E-5 score: 21.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 286..320 score: 11.651919
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 357..391 score: 8.506026
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 176..210 score: 8.977363
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 251..437 e-value: 1.1E-35 score: 125.5 coord: 75..250 e-value: 7.1E-24 score: 86.7
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 380..443
None	No IPR available	PANTHER	PTHR47928:SF115	OS02G0126500 PROTEIN	coord: 22..465
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 22..465

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0023039	PI0023039	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0023039.1-exon	PI0023039.1-exon-chr11:28104597..28106157	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0023039.1-three_prime_utr	PI0023039.1-three_prime_utr-chr11:28104597..28104747	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0023039.1-cds	PI0023039.1-cds-chr11:28104748..28106157	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0023039.1	PI0023039.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0009451	RNA modification
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding