PI0022347.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0022347.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RING-type domain-containing protein
Location	chr06: 30500492 .. 30501310 (+)
Sequence length	819
RNA-Seq Expression	PI0022347.1
Synteny	PI0022347.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTTAAATCTTGTGTTATATTCAAATGTGATGATAGAAGTTTTTAATATGAGAAAGGTCAAAAGTAACTCTCTTGTTTAGGTAGCAACCGCTTTGTGTATGACTCATTACTATCCTTCTTCTTCACCAATCCAACCACTTCTAACCCACGCAAGAATTGCTTTCTTTTTTTCCTCTAATCTCATCTTCCTTTTCATTAAAAAAAAGAAAAAACATCTCTAGCTAGCTAATGACTTCCAAATCTCTTCATTGATGACAAATGGTTTTCAACAAGGTCTTCTTCTTCTTCTACAACAACTTCATTGGCTTCCGAAGCCGGCCAAGATTCAAGCAAGCAACCCCGCTTCCTTGCAGTGGCAATTCAAGCCTTCGACCTATGCCAACTGATGATTGTACTATTGTAGCTCTTTCGAGTCCTGAGAAGGCGTTGGAGGGCGAGACATGTTGCGTGTGCTTGTCAAGTATGGGAAACACAGACGGAGATGGAGACAAGGGGGTTTGCACGAGTGTTCTTCCTTGTTTGCATGAGTTTCATAAGGTATGCGTCGATCGATGGTTCGAAGAGTGTCGTAGAACTTGTCCGATATGTCGATATTCGATGGAAGGAGGAGGTAGTCATGAAGATGAGACTAATCAAATACTCACTGATGAGATGGTGATATGGTTTTCTTCTTTTCACACCTCTGGTTTTTGAGCTCTTTTGATTTGTTAATTACATCTTATTCTAAAAGCTTTCAAGCTTTTGCAAAAATGCTTCCTTTTTACAAAGTAAAATCAACATGATTTTGACTAATGTCATTTGGATGGCTCTAGCTTCAC

mRNA sequence

TTGTTAAATCTTGTGTTATATTCAAATGTGATGATAGAAGTTTTTAATATGAGAAAGGTCAAAAGTAACTCTCTTGTTTAGGTAGCAACCGCTTTGTGTATGACTCATTACTATCCTTCTTCTTCACCAATCCAACCACTTCTAACCCACGCAAGAATTGCTTTCTTTTTTTCCTCTAATCTCATCTTCCTTTTCATTAAAAAAAAGAAAAAACATCTCTAGCTAGCTAATGACTTCCAAATCTCTTCATTGATGACAAATGGTTTTCAACAAGGTCTTCTTCTTCTTCTACAACAACTTCATTGGCTTCCGAAGCCGGCCAAGATTCAAGCAAGCAACCCCGCTTCCTTGCAGTGGCAATTCAAGCCTTCGACCTATGCCAACTGATGATTGTACTATTGTAGCTCTTTCGAGTCCTGAGAAGGCGTTGGAGGGCGAGACATGTTGCGTGTGCTTGTCAAGTATGGGAAACACAGACGGAGATGGAGACAAGGGGGTTTGCACGAGTGTTCTTCCTTGTTTGCATGAGTTTCATAAGGTATGCGTCGATCGATGGTTCGAAGAGTGTCGTAGAACTTGTCCGATATGTCGATATTCGATGGAAGGAGGAGGTAGTCATGAAGATGAGACTAATCAAATACTCACTGATGAGATGGTGATATGGTTTTCTTCTTTTCACACCTCTGGTTTTTGAGCTCTTTTGATTTGTTAATTACATCTTATTCTAAAAGCTTTCAAGCTTTTGCAAAAATGCTTCCTTTTTACAAAGTAAAATCAACATGATTTTGACTAATGTCATTTGGATGGCTCTAGCTTCAC

Coding sequence (CDS)

ATGGTTTTCAACAAGGTCTTCTTCTTCTTCTACAACAACTTCATTGGCTTCCGAAGCCGGCCAAGATTCAAGCAAGCAACCCCGCTTCCTTGCAGTGGCAATTCAAGCCTTCGACCTATGCCAACTGATGATTGTACTATTGTAGCTCTTTCGAGTCCTGAGAAGGCGTTGGAGGGCGAGACATGTTGCGTGTGCTTGTCAAGTATGGGAAACACAGACGGAGATGGAGACAAGGGGGTTTGCACGAGTGTTCTTCCTTGTTTGCATGAGTTTCATAAGGTATGCGTCGATCGATGGTTCGAAGAGTGTCGTAGAACTTGTCCGATATGTCGATATTCGATGGAAGGAGGAGGTAGTCATGAAGATGAGACTAATCAAATACTCACTGATGAGATGGTGATATGGTTTTCTTCTTTTCACACCTCTGGTTTTTGA

Protein sequence

MVFNKVFFFFYNNFIGFRSRPRFKQATPLPCSGNSSLRPMPTDDCTIVALSSPEKALEGETCCVCLSSMGNTDGDGDKGVCTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGGGSHEDETNQILTDEMVIWFSSFHTSGF

Homology

[Close]

BLAST of PI0022347.1 vs. ExPASy Swiss-Prot
Match: Q91XF4 (E3 ubiquitin-protein ligase RNF167 OS=Mus musculus OX=10090 GN=Rnf167 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-08
Identity = 32/95 (33.68%), Postives = 45/95 (47.37%), Query Frame = 0


Query: 37  LRPMPTDDCTIVALSSPEKALEGETCCVCLSSMGNTDGDGDKGVCTSVLPCLHEFHKVCV 96
           L+ +PT D         +K  E + C +CL        DGDK     VLPC H +H  CV
Sbjct: 213 LKQIPTHDY--------QKGDEYDVCAICLDEY----EDGDK---LRVLPCAHAYHSRCV 272

Query: 97  DRWFEECRRTCPICRYSMEGGGSHEDETNQILTDE 132
           D W  + R+TCPIC+  +  G   E++  +    E
Sbjct: 273 DPWLTQTRKTCPICKQPVHRGPGDEEQEEETQEQE 292

[Close]

BLAST of PI0022347.1 vs. ExPASy Swiss-Prot
Match: Q9H6Y7 (E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens OX=9606 GN=RNF167 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08
Identity = 31/90 (34.44%), Postives = 44/90 (48.89%), Query Frame = 0


Query: 37  LRPMPTDDCTIVALSSPEKALEGETCCVCLSSMGNTDGDGDKGVCTSVLPCLHEFHKVCV 96
           L+ +PT D         +K  + + C +CL        DGDK     VLPC H +H  CV
Sbjct: 213 LKQIPTHDY--------QKGDQYDVCAICLDEY----EDGDK---LRVLPCAHAYHSRCV 272

Query: 97  DRWFEECRRTCPICRYSMEGGGSHEDETNQ 127
           D W  + R+TCPIC+  +  G   ED+  +
Sbjct: 273 DPWLTQTRKTCPICKQPVHRGPGDEDQEEE 287

[Close]

BLAST of PI0022347.1 vs. ExPASy Swiss-Prot
Match: Q5XIL0 (E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus OX=10116 GN=Rnf167 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.4e-08
Identity = 30/90 (33.33%), Postives = 44/90 (48.89%), Query Frame = 0


Query: 37  LRPMPTDDCTIVALSSPEKALEGETCCVCLSSMGNTDGDGDKGVCTSVLPCLHEFHKVCV 96
           L+ +PT D         +K  E + C +CL        DGDK     +LPC H +H  CV
Sbjct: 213 LKQIPTHDY--------QKGDEYDVCAICLDEY----EDGDK---LRILPCAHAYHSRCV 272

Query: 97  DRWFEECRRTCPICRYSMEGGGSHEDETNQ 127
           D W  + R+TCPIC+  +  G   E++  +
Sbjct: 273 DPWLTQTRKTCPICKQPVHRGPGDEEQEEE 287

[Close]

BLAST of PI0022347.1 vs. ExPASy Swiss-Prot
Match: Q06003 (Protein goliath OS=Drosophila melanogaster OX=7227 GN=gol PE=2 SV=3)

HSP 1 Score: 56.2 bits (134), Expect = 3.5e-07
Identity = 25/60 (41.67%), Postives = 34/60 (56.67%), Query Frame = 0


Query: 52  SPEKALEGETCCVCLSSMGNTDGDGDKGVCTSVLPCLHEFHKVCVDRWFEECRRTCPICR 111
           S EK L+ + C +C+ +   TD          +LPC HEFHK C+D W  E  RTCP+C+
Sbjct: 293 SDEKDLDSDCCAICIEAYKPTD-------TIRILPCKHEFHKNCIDPWLIE-HRTCPMCK 344

[Close]

BLAST of PI0022347.1 vs. ExPASy Swiss-Prot
Match: F4HZZ5 (Receptor homology region, transmembrane domain- and RING domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=RMR5 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.6e-07
Identity = 28/89 (31.46%), Postives = 41/89 (46.07%), Query Frame = 0


Query: 29  LPCSGNSSLRPMPTDDCTIVALSSPEKALEGETCCVCLSSMGNTDGDGDKGVCTSVLPCL 88
           L C     L+ MPT+    V     E++    TC +C+        D   G    +LPC 
Sbjct: 204 LSCMPRDLLQSMPTE----VYSGVLEESSTSVTCAICID-------DYCVGEKLRILPCK 263

Query: 89  HEFHKVCVDRWFEECRRTCPICRYSMEGG 118
           H++H VC+D W   CR  CP+C+ +   G
Sbjct: 264 HKYHAVCIDSWLGRCRSFCPVCKQNPRTG 281

[Close]

BLAST of PI0022347.1 vs. ExPASy TrEMBL
Match: A0A0A0L4W7 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002620 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.1e-75
Identity = 135/144 (93.75%), Postives = 139/144 (96.53%), Query Frame = 0


Query: 1   MVFNKVFFFFYNNFIGFRSRPRFKQATPLPCSGNSSLRPMPTDDCTIVALSSPEKALEGE 60
           M+FNKVFFFFYNN IGFRSRPRFKQATPLP SGNSSLRP+PTDDCTI+ALSS EKALEGE
Sbjct: 1   MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGE 60

Query: 61  TCCVCLSSMGNTDGDGDKGVCTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGGGSH 120
           TCCVCLSSMGNTD DGDKGV TSVLPCLHEFHKVCV+RWFEECRRTCPICRYSMEGGGSH
Sbjct: 61  TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSH 120

Query: 121 EDETNQILTDEMVIWFSSFHTSGF 145
           EDETNQILTDEMVIWFSSFHTSGF
Sbjct: 121 EDETNQILTDEMVIWFSSFHTSGF 144

[Close]

BLAST of PI0022347.1 vs. ExPASy TrEMBL
Match: A0A5D3CJ45 (E3 ubiquitin-protein ligase RNF13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00530 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.1e-72
Identity = 138/149 (92.62%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MVFNKVFFFFYNNFIGFRSRP-RFKQATPLPCSGNSSLRPMPTDDCTIVALSSPEKALEG 60
           MVFNKVFFFFYNNFIGFRSRP RFKQATPLP  GNSSLRPMPTDDCTI+ALSS EKALEG
Sbjct: 1   MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEG 60

Query: 61  ETCCVCLSSMGNTDGDGDKGV--CTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSME-- 120
           ETCCVCLSSMGNTDGDGDKGV   TSVLPCLHEFHKVCV+RWFEECRRTCPICRYSME  
Sbjct: 61  ETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGG 120

Query: 121 GGGSHEDETNQILTDEMVIWFSSFHTSGF 145
           GGGSHEDETNQILTDEMVIWFSSFHTSGF
Sbjct: 121 GGGSHEDETNQILTDEMVIWFSSFHTSGF 149

[Close]

BLAST of PI0022347.1 vs. ExPASy TrEMBL
Match: A0A6J1CW69 (E3 ubiquitin-protein ligase SDIR1-like OS=Momordica charantia OX=3673 GN=LOC111014786 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 5.2e-46
Identity = 102/148 (68.92%), Postives = 112/148 (75.68%), Query Frame = 0


Query: 1   MVFNKVFFFFYNNFIGFRSRPRFKQATPLPCSGNSSLRPMPTDDCTI---VALSSPEKAL 60
           MVFN+VFFFFY NFIGFR RP+ KQ T LP  G+S+LR M  D+  I   V LSS  KAL
Sbjct: 1   MVFNRVFFFFY-NFIGFRGRPKLKQKTLLPHGGDSTLRQMVEDESRIPDCVTLSSSGKAL 60

Query: 61  EGE-TCCVCLSSMGNTDGDGDKGVCTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSMEG 120
           EGE  CCVCLSS+       ++G+ TSVLPCLHEFHKVCVDRWFEE RRTCPICRYSMEG
Sbjct: 61  EGEMCCCVCLSSI-------EEGIETSVLPCLHEFHKVCVDRWFEERRRTCPICRYSMEG 120

Query: 121 GGSHEDETNQILTDEMVIWFSSFHTSGF 145
            G   +   QILTDEMVIWFSSFHTSGF
Sbjct: 121 AGQGNENGTQILTDEMVIWFSSFHTSGF 140

[Close]

BLAST of PI0022347.1 vs. ExPASy TrEMBL
Match: A0A7N2R4T7 (RING-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.3e-25
Identity = 71/149 (47.65%), Postives = 90/149 (60.40%), Query Frame = 0


Query: 1   MVFNKVFFFFYNNFIG----FRSRPRFKQATPLPCSGNSSLRPMPTDDCTIVALSSPEKA 60
           MVF K+  F YN+ IG     R++P F +A  L       L  +  D+  +      E  
Sbjct: 1   MVFKKLVCFIYNHLIGNGDHLRAQPTFWEAPSL-------LHKVSLDEVEVEV--EVEVE 60

Query: 61  LEGETCCVCLSSMGNTDGDGDKGVCTSVLPCLHEFHKVCVDRWFEE-CRRTCPICRYSME 120
           +EGE CCVCLS +      G + + T  LPCLHEFHK+CVDRWF   CR+TCP+CR+SM 
Sbjct: 61  VEGEVCCVCLSRLKK----GQEEMRT--LPCLHEFHKICVDRWFNHVCRKTCPVCRFSM- 120

Query: 121 GGGSHEDETNQILTDEMVIWFSSFHTSGF 145
            GG  +  T Q+LTDEMVIWFSSFH +GF
Sbjct: 121 -GGEDKFHTQQVLTDEMVIWFSSFHVAGF 132

[Close]

BLAST of PI0022347.1 vs. ExPASy TrEMBL
Match: A0A6A1UIA7 (Protein preY, mitochondrial OS=Morella rubra OX=262757 GN=CJ030_MR0G008870 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.2e-23
Identity = 69/138 (50.00%), Postives = 82/138 (59.42%), Query Frame = 0


Query: 15  IGFRSRPRFKQATPLPCSGNSSLRPMPTD----DCTIVA---LSSPEKALEGE-TCCVCL 74
           IG R++P  K+A   P S  S +     D    D T+ A    SS  +  EGE  CCVCL
Sbjct: 102 IGLRAQPALKEA---PSSSYSVINWDDLDEVKEDPTMSARGSSSSSGEVHEGEQQCCVCL 161

Query: 75  SSMGNTDGDGDKGVCTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGGGSHEDETNQ 134
           S +        KG  T +LPCLHEFHKVCVDRWF  CR+TCP+CR+SM  GG       +
Sbjct: 162 SRL-------KKGQDTRILPCLHEFHKVCVDRWFNSCRKTCPVCRFSM--GGEDNCRVQE 221

Query: 135 ILTDEMVIWFSSFHTSGF 145
            LTDEMVIWFSSFH +GF
Sbjct: 222 ALTDEMVIWFSSFHVAGF 227

[Close]

BLAST of PI0022347.1 vs. NCBI nr
Match: KAA0052944.1 (E3 ubiquitin-protein ligase RNF13 [Cucumis melo var. makuwa] >TYK11400.1 E3 ubiquitin-protein ligase RNF13 [Cucumis melo var. makuwa])

HSP 1 Score: 282.3 bits (721), Expect = 2.3e-72
Identity = 138/149 (92.62%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MVFNKVFFFFYNNFIGFRSRP-RFKQATPLPCSGNSSLRPMPTDDCTIVALSSPEKALEG 60
           MVFNKVFFFFYNNFIGFRSRP RFKQATPLP  GNSSLRPMPTDDCTI+ALSS EKALEG
Sbjct: 1   MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEG 60

Query: 61  ETCCVCLSSMGNTDGDGDKGV--CTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSME-- 120
           ETCCVCLSSMGNTDGDGDKGV   TSVLPCLHEFHKVCV+RWFEECRRTCPICRYSME  
Sbjct: 61  ETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGG 120

Query: 121 GGGSHEDETNQILTDEMVIWFSSFHTSGF 145
           GGGSHEDETNQILTDEMVIWFSSFHTSGF
Sbjct: 121 GGGSHEDETNQILTDEMVIWFSSFHTSGF 149

[Close]

BLAST of PI0022347.1 vs. NCBI nr
Match: KAE8649999.1 (hypothetical protein Csa_010276, partial [Cucumis sativus])

HSP 1 Score: 281.6 bits (719), Expect = 3.9e-72
Identity = 131/139 (94.24%), Postives = 134/139 (96.40%), Query Frame = 0


Query: 6   VFFFFYNNFIGFRSRPRFKQATPLPCSGNSSLRPMPTDDCTIVALSSPEKALEGETCCVC 65
           VFFFFYNN IGFRSRPRFKQATPLP SGNSSLRP+PTDDCTI+ALSS EKALEGETCCVC
Sbjct: 1   VFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVC 60

Query: 66  LSSMGNTDGDGDKGVCTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGGGSHEDETN 125
           LSSMGNTD DGDKGV TSVLPCLHEFHKVCV+RWFEECRRTCPICRYSMEGGGSHEDETN
Sbjct: 61  LSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSHEDETN 120

Query: 126 QILTDEMVIWFSSFHTSGF 145
           QILTDEMVIWFSSFHTSGF
Sbjct: 121 QILTDEMVIWFSSFHTSGF 139

[Close]

BLAST of PI0022347.1 vs. NCBI nr
Match: XP_038906276.1 (E3 ubiquitin-protein ligase RNF167-like [Benincasa hispida])

HSP 1 Score: 269.6 bits (688), Expect = 1.5e-68
Identity = 129/146 (88.36%), Postives = 131/146 (89.73%), Query Frame = 0


Query: 1   MVFNKVFFFFYNNFIGFRSRPRFKQATPLPCSGNSSLRPMPTDDCTIVALSSPEKALEGE 60
           MVFNKVFFFFYNNF+GFRSR R KQATPLP  GN SLRP+  DDC IV LSSPEKALEGE
Sbjct: 1   MVFNKVFFFFYNNFMGFRSRLRCKQATPLPHGGNLSLRPITPDDCAIVTLSSPEKALEGE 60

Query: 61  TCCVCLSSMGNTDGDGDKGV--CTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGGG 120
           TCCVCLSSMGN DGD DKGV   TSVLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGGG
Sbjct: 61  TCCVCLSSMGNKDGDRDKGVGTSTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGGG 120

Query: 121 SHEDETNQILTDEMVIWFSSFHTSGF 145
           SHED TNQILTDEMVIWFSSFHTSGF
Sbjct: 121 SHEDGTNQILTDEMVIWFSSFHTSGF 146

[Close]

BLAST of PI0022347.1 vs. NCBI nr
Match: KAG6577791.1 (Protein goliath, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 239.6 bits (610), Expect = 1.7e-59
Identity = 114/145 (78.62%), Postives = 126/145 (86.90%), Query Frame = 0


Query: 1   MVFNKVFFFFYNNFIGFRSRPRFKQATPLPCSGNSSLRPMPTDDCTIVALSSPEKALEGE 60
           MVFNK+FFFFYNN IGFR+ P  KQATPLP S +SSLRPM  DDC + ALSSPEKALEGE
Sbjct: 1   MVFNKLFFFFYNNLIGFRTSPTLKQATPLPRSADSSLRPMTPDDC-VAALSSPEKALEGE 60

Query: 61  TCCVCLSSMGNTDGDGDKGVCTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGGG-S 120
           TCCVCLS MGN   D D+G+ TSVLPC HEFHK+C+DRWFEECRRTCPICRYSMEGGG +
Sbjct: 61  TCCVCLSCMGNK--DKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGGNN 120

Query: 121 HEDETNQILTDEMVIWFSSFHTSGF 145
           HED +N++LTDEMVIWFSSFHTSGF
Sbjct: 121 HEDGSNEMLTDEMVIWFSSFHTSGF 142

[Close]

BLAST of PI0022347.1 vs. NCBI nr
Match: KAG7015830.1 (Protein goliath, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 237.3 bits (604), Expect = 8.4e-59
Identity = 113/145 (77.93%), Postives = 125/145 (86.21%), Query Frame = 0


Query: 1   MVFNKVFFFFYNNFIGFRSRPRFKQATPLPCSGNSSLRPMPTDDCTIVALSSPEKALEGE 60
           MVFNK+FFFFYNN IGFR+ P  KQATPLP S +SSLRP   DDC + ALSSPEKALEGE
Sbjct: 1   MVFNKLFFFFYNNLIGFRTSPTLKQATPLPRSADSSLRPTTPDDC-VAALSSPEKALEGE 60

Query: 61  TCCVCLSSMGNTDGDGDKGVCTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGGG-S 120
           TCCVCLS MGN   D D+G+ TSVLPC HEFHK+C+DRWFEECRRTCPICRYSMEGGG +
Sbjct: 61  TCCVCLSCMGNK--DKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGGNN 120

Query: 121 HEDETNQILTDEMVIWFSSFHTSGF 145
           HED +N++LTDEMVIWFSSFHTSGF
Sbjct: 121 HEDGSNEMLTDEMVIWFSSFHTSGF 142

[Close]

BLAST of PI0022347.1 vs. TAIR 10
Match: AT3G51325.1 (RING/U-box superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 4.4e-13
Identity = 37/84 (44.05%), Postives = 45/84 (53.57%), Query Frame = 0


Query: 58  EGETCCVCLSSMGNTDGDGDKGVCTSVLPCLHEFHKVCVDRWFEECRR-TCPICRYSMEG 117
           E E C VCL  M   D           LPC HEFH +CVD WF   R+  CP+CR+S   
Sbjct: 22  EEECCSVCLMRMEAKD-------VIKSLPCSHEFHSLCVDTWFNVSRKICCPLCRFS--- 81

Query: 118 GGSHEDETNQILTDEMVIWFSSFH 141
                  T  +LTDE+++WFSSFH
Sbjct: 82  ------PTTILLTDELLLWFSSFH 89

[Close]

BLAST of PI0022347.1 vs. TAIR 10
Match: AT5G45290.1 (RING/U-box superfamily protein )

HSP 1 Score: 57.0 bits (136), Expect = 1.5e-08
Identity = 27/75 (36.00%), Postives = 36/75 (48.00%), Query Frame = 0


Query: 39  PMPTD--DCTIVALSSPEKALEGETCCVCLSSMGNTDGDGDKGVCTSVLPCLHEFHKVCV 98
           P P D  D   + L +  ++ +   C +CL      D           LPC HEFHK CV
Sbjct: 465 PAPNDVVDLLPIKLYTKSQSEDPSQCYICLVEYEEADS-------IRTLPCHHEFHKTCV 524

Query: 99  DRWFEECRRTCPICR 112
           D+W +E  R CP+CR
Sbjct: 525 DKWLKEIHRVCPLCR 532

[Close]

BLAST of PI0022347.1 vs. TAIR 10
Match: AT1G35630.1 (Protease-associated (PA) RING/U-box zinc finger family protein )

HSP 1 Score: 55.8 bits (133), Expect = 3.2e-08
Identity = 28/89 (31.46%), Postives = 41/89 (46.07%), Query Frame = 0


Query: 29  LPCSGNSSLRPMPTDDCTIVALSSPEKALEGETCCVCLSSMGNTDGDGDKGVCTSVLPCL 88
           L C     L+ MPT+    V     E++    TC +C+        D   G    +LPC 
Sbjct: 204 LSCMPRDLLQSMPTE----VYSGVLEESSTSVTCAICID-------DYCVGEKLRILPCK 263

Query: 89  HEFHKVCVDRWFEECRRTCPICRYSMEGG 118
           H++H VC+D W   CR  CP+C+ +   G
Sbjct: 264 HKYHAVCIDSWLGRCRSFCPVCKQNPRTG 281

[Close]

BLAST of PI0022347.1 vs. TAIR 10
Match: AT3G55530.1 (RING/U-box superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 3.2e-08
Identity = 31/105 (29.52%), Postives = 47/105 (44.76%), Query Frame = 0


Query: 30  PCSGNSSLRPMPTDDCTIVALSSPEKALEGE----TCCVCLSSMGNTDGDGDKGVCTSVL 89
           P +G S  +   T       L S  ++ +G     TC VCL  +         G     L
Sbjct: 175 PENGCSLAKQASTSSSAEKMLDSANESKKGTEDELTCSVCLEQV-------TVGEIVRTL 234

Query: 90  PCLHEFHKVCVDRWFEECRRTCPICRYSMEGGGSHEDETNQILTD 131
           PCLH+FH  C+D W  + + TCP+C++    G   +DE +   +D
Sbjct: 235 PCLHQFHAGCIDPWLRQ-QGTCPVCKFRAHSGWQEQDEIDDDASD 271

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BLAST of PI0022347.1 vs. TAIR 10
Match: AT1G35625.1 (RING/U-box superfamily protein )

HSP 1 Score: 55.5 bits (132), Expect = 4.2e-08
Identity = 27/81 (33.33%), Postives = 39/81 (48.15%), Query Frame = 0


Query: 37  LRPMPTDDCTIVALSSPEKALEGETCCVCLSSMGNTDGDGDKGVCTSVLPCLHEFHKVCV 96
           L+ MPT+  T V     E+     TC +C+        D   G    +LPC H++H VC+
Sbjct: 95  LQSMPTEVYTGVL----EEGSTSVTCAICID-------DYRVGEILRILPCKHKYHAVCI 154

Query: 97  DRWFEECRRTCPICRYSMEGG 118
           D W   CR  CP+C+ +   G
Sbjct: 155 DSWLGRCRSFCPVCKQNPRTG 164

The following BLAST results are available for this feature:

BLAST of PI0022347.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91XF4	1.1e-08	33.68	E3 ubiquitin-protein ligase RNF167 OS=Mus musculus OX=10090 GN=Rnf167 PE=2 SV=1	[more]
Q9H6Y7	1.4e-08	34.44	E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens OX=9606 GN=RNF167 PE=1 SV=1	[more]
Q5XIL0	2.4e-08	33.33	E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus OX=10116 GN=Rnf167 PE=2 ...	[more]
Q06003	3.5e-07	41.67	Protein goliath OS=Drosophila melanogaster OX=7227 GN=gol PE=2 SV=3	[more]
F4HZZ5	4.6e-07	31.46	Receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]

BLAST of PI0022347.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4W7	3.1e-75	93.75	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002620 P...	[more]
A0A5D3CJ45	1.1e-72	92.62	E3 ubiquitin-protein ligase RNF13 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A6J1CW69	5.2e-46	68.92	E3 ubiquitin-protein ligase SDIR1-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A7N2R4T7	2.3e-25	47.65	RING-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A6A1UIA7	1.2e-23	50.00	Protein preY, mitochondrial OS=Morella rubra OX=262757 GN=CJ030_MR0G008870 PE=4 ...	[more]

BLAST of PI0022347.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052944.1	2.3e-72	92.62	E3 ubiquitin-protein ligase RNF13 [Cucumis melo var. makuwa] >TYK11400.1 E3 ubiq...	[more]
KAE8649999.1	3.9e-72	94.24	hypothetical protein Csa_010276, partial [Cucumis sativus]	[more]
XP_038906276.1	1.5e-68	88.36	E3 ubiquitin-protein ligase RNF167-like [Benincasa hispida]	[more]
KAG6577791.1	1.7e-59	78.62	Protein goliath, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7015830.1	8.4e-59	77.93	Protein goliath, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of PI0022347.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51325.1	4.4e-13	44.05	RING/U-box superfamily protein	[more]
AT5G45290.1	1.5e-08	36.00	RING/U-box superfamily protein	[more]
AT1G35630.1	3.2e-08	31.46	Protease-associated (PA) RING/U-box zinc finger family protein	[more]
AT3G55530.1	3.2e-08	29.52	RING/U-box superfamily protein	[more]
AT1G35625.1	4.2e-08	33.33	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 62..110 e-value: 4.9E-5 score: 32.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 61..111 e-value: 1.5E-8 score: 34.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 62..111 score: 11.899158
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 48..127 e-value: 1.0E-13 score: 52.3
None	No IPR available	PANTHER	PTHR45977	TARGET OF ERK KINASE MPK-1	coord: 23..121
None	No IPR available	PANTHER	PTHR45977:SF13	GB\|AAF27103.1	coord: 23..121
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 50..114

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0022347	PI0022347	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0022347.1-five_prime_utr	PI0022347.1-five_prime_utr-chr06:30500492..30500750	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0022347.1-exon	PI0022347.1-exon-chr06:30500492..30501310	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0022347.1-cds	PI0022347.1-cds-chr06:30500751..30501185	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0022347.1-three_prime_utr	PI0022347.1-three_prime_utr-chr06:30501186..30501310	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0022347.1	PI0022347.1-protein	polypeptide