PI0021618.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0021618.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr01: 13007147 .. 13007536 (-)
Sequence length	228
RNA-Seq Expression	PI0021618.1
Synteny	PI0021618.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATGGAGTCGCCTGAACGTTGATGGACGGAGAAGCTGCCCCCCTATCAGTGATAGTAAGGTATACAGAGACTTGGGTTACACAGTTTATTTATTTATTTATTATTATTATTATTACTTTCTTTTGACAAACAACAATTCTATTAATAGATATTAATCCTTTATAAGTTAAATGATTGAGACTCACAACGGAGAATAGGCCTAATTTATCAATTAATCTCAGCCCATGAAAGAGGGCCAATGCCTCAGCAGCAAAAATCTCCACGGTAGAAGACTGAAAAAAGACGCAGCAGCCACCACTACTCAATACTCCTTGATGGTCCAGATTCACCACTCCCAGTCCCAGACTCAATGGCAAACGACAAAGACGTATCCACATTCAAAATGA

mRNA sequence

ATGAAATGGAGTCGCCTGAACGTTGATGGACGGAGAAGCTGCCCCCCTATCAGTGATAGTAAGCCCATGAAAGAGGGCCAATGCCTCAGCAGCAAAAATCTCCACGGTAGAAGACTGAAAAAAGACGCAGCAGCCACCACTACTCAATACTCCTTGATGGTCCAGATTCACCACTCCCAGTCCCAGACTCAATGGCAAACGACAAAGACGTATCCACATTCAAAATGA

Coding sequence (CDS)

ATGAAATGGAGTCGCCTGAACGTTGATGGACGGAGAAGCTGCCCCCCTATCAGTGATAGTAAGCCCATGAAAGAGGGCCAATGCCTCAGCAGCAAAAATCTCCACGGTAGAAGACTGAAAAAAGACGCAGCAGCCACCACTACTCAATACTCCTTGATGGTCCAGATTCACCACTCCCAGTCCCAGACTCAATGGCAAACGACAAAGACGTATCCACATTCAAAATGA

Protein sequence

MKWSRLNVDGRRSCPPISDSKPMKEGQCLSSKNLHGRRLKKDAAATTTQYSLMVQIHHSQSQTQWQTTKTYPHSK

Homology

The following BLAST results are available for this feature:

BLAST of PI0021618.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0021618.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0021618.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0021618.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0021618	PI0021618	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0021618.1-exon	PI0021618.1-exon-chr01:13007147..13007311	exon
PI0021618.1-exon	PI0021618.1-exon-chr01:13007474..13007536	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0021618.1-cds	PI0021618.1-cds-chr01:13007147..13007311	CDS
PI0021618.1-cds	PI0021618.1-cds-chr01:13007474..13007536	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0021618.1	PI0021618.1-protein	polypeptide