PI0020646.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0020646.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	coiled-coil domain-containing protein 124
Location	chr01: 4849645 .. 4853355 (-)
Sequence length	1549
RNA-Seq Expression	PI0020646.1
Synteny	PI0020646.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTAATTTCCTTTTTACAAATTGTAAGAAATGGATTTTGGTAGGGCTTATTTTGGGTAGATGTTCCATTTCCGTTATTCGTAGAACTTGGTACAATCCTCCGTTTCCAACAATTTTGATCGATCTTCATCGTCGCCCTCGCCGGAGACGATCTCTCAACCAAAAAAACTAACCATGCCGAAGAAGATGGGTGTAAACAGCAAAGCCGAGGCCGCCAGAGCACGCAAGAGCGCCGTTGAGACCGAGCGCAAGGAGCGAGAGAGTCAGCAGAAGGAGGATCAATTCTGGCGAGAAGCCGAGGGTCCCAAGTCCCGCGCTGCCAAGAAACGGGAGGATGAATCTGAGAAGCGTGCTGAGGCCGCCGCTCGAAAGGCGGAGGCACGTCGTTTGGCCGAACAGGAGGAGAAGGAATTGGAAAAAACTATGAAGAAGCCTGATAAAAAGGCGAGTAGGGTTGCACTTCCGGTCCCCAAGGTAACCGAGCTTGAATTGAGGAAGCGCAGAGAGGAGGAGCAAGCTGAGCTCCAGAGGAAGGCCGAGGAAGCTAAGAAAAAGCAGAGCCGGACGGCGGCCGAGGAGGAGTACGAGAGGATGGTGCTGGTTACCAATACTAATAGGGATGATTCAATTATTGAAGCCAGGACGGTGGAAGACGCGATTGCTCAGATTTCTGTTGCGGATAATTTGCCCGTGGATAGGCATCCAGAGCGACGGCTTAAAGCCTCTTTTAAGGTGCGATTGATTCTCCTTGTACTTGCAATTGTAAACATTGTAACATAGAAATCGCCTTGATTTTTTTGTTGAAATTTTTTTAATGTTTGATGGGGAACTTAGAGGGTTTATCTCTATAATTCGCATAGTTCTAACTGGTACTTGAAGGTTGTTACTTTAGTGTCTTTTGGTGCCATGGGAAATATTAGTTTTGAACGAAGGAAAATGGACATTGGGAAACAATATGGTGAACGGAAGACTGGGTTACTGAAGTGCATTCTAGGATCAACTTTTAATCGTATACATAAGTTGAAGCTTTATTGACCTTTTAAGTAGTGTGTCTTTACATTCTTGGTCATATGATTGCAATGCGTATGTTATCTTGTTCTTATTATTGTTAATAGTCGTATATATGTTGCTCATTGTTCAACGAGTTATATTGTAGTAATGAATTGGGCATTGGAGACCAGATCCGCCAGTAAATTTTTAAGCATATCTTCTTCGGGAGTAGGCATTACATTACATATCTCTGTCATTTAATATTATGTAAGTAATCATAAGTTTAGGCAATTTTCCATGTTCCTGCTTCTCTTAGGATGTGGTCCTCAGTGGTGGGTGAGTTGGATTGATTCTGTGAAGGGAATTAGTGTTTGCTCCTTTCTCGTGTAAATAACTGGGAATGGGACTAGTGCCTATGATTCACTTTCTAAATACCACTCTGCTTGCAATTCATTTCTGATATAATGTTGTCCATCTTCAGAATGTTTACTATAATGGTACCTGTTGTTCAGTGTTCACATGTCCAGTTCAGCATTGCGATTTTTAACATAGTTACCTATAGCTCTTTTGGAGATGCTGCTTTTGAATCATTATATTAATATTGTTTAAAAACTGAAAATGCACCAGTTAATCACATTTTCATTATTTATATATTTTTGATAGACAGTCTTTATCATGTGGCAAGTACAAAATAGCCTTTTCTACACCTATGTTTTTGGATTGACAACCTTTCTGATACTTTTCAAATTTTATGACAGTTATCTAGTATAGATACAGTTTCATTCATTTTCACTCTCCTTGTATTGAATGCCCAATTATGCTTATTTTTTTCTTATCGATTATTATTCTCTTAAAAGAATTGTGTTAAGTTATTTGTTCTGGTTTTAGAAACTTGCACCCTTTTGTTCATATCATCTATGAATTGTCTTGTTGATCATTTCTTTTTCTGGGGAAAAAACCTTGTCTCTCCTGACTCCTGTGAAGTTCACTGATCAGATTGACTACCGTGAATGGAGGTGGAGGAATGTGTTGACTTAAGTCAGAAAAAATTTGAGGGGGCAGTTAGTTCTCAAAATTGAGAATGCAAACTCTGGAAACCTGAAACTCGGGAATTTTTTTCATCTAGATCTGCTGCCTACCAAGTCAATACTGTGGGTGGAAAATCCCCTATTAATAATAGTCAAGAAGCAAGATGATTCAGTAGGTTTAGTGTTAGGAATATTAATCGGATATAGGAGCAACTCGCCAGCTAAGGAATTTGTTAGTGGGAGATGGTGGTTATAATTAGGTTGAGACAGTGAGGAGGGATGAAGAAACGAGCTATTTAGTTATTTAGAGCTTTAACTTACTCAAGAGGGTGGTGGTTTTTAAGTTCCTGAGTTTACCTGGGATATATATCTTTGTTCTTCAAGTTTCCACATTCCATTACCATTCCTATTTCAATTATGTGGTTCTTACGAAACTGGTGTCGGACTTTCTGGATCTTGGGAATGAACTTGGAAGGTAGAACGGTTTTGTTGGAATGACACGTATATCAAAGGAAGAAGTGACTTCAATAAAAGTGAAGTCATTTTAGGAGATAAAATTGAAATAGAAAGATGAGGGAAAGGAGAGGCAGTTTAAGCAAGAAAATATATCTATTTTGGGTTCCTTTTCTTATTAAACACTAACTAGGGGTATCTCTTCTAAACTTTTCATATTTGGTTGATTTGCTCTCTTTGATTTTGTTATTGAGCATTCTGCTGTTTCCTATAAAAAAGAATGTGTCACCCTGAAAGTTCTTGTTTTTACCCTTTTTCTCTGACGATTAGGCTTTCGAAGAAGCTGAGCTCCCCAGGCTGAAGGAAGAGAACCCGGTCTTACCCACAATCAGTATAAAGACATGATATGGAAGCTATGGAAGAAGTCTCCTGACAACCCTCTTAATCAGGTAGTTTAATGTATAAACATTCTAAAGAGCATTATTCTGCTTTTTCCCTCTTTCTTTAAACCGTGCCTGCTTTTTTATTTCGTTTTGTGGTAGGTTGCAGCAGAGTGAGTTGATCCACATCCTTCGGCATGGGTCTGGCAGGTTTTCCCTAGATTATTAAGCCTGTTTACTAAAGCTTGGTCAAAATTTGTTATCTGACCAATTCTTCTTCAGTTCAGTTGTATCCTGGAATGTTTGGTTTGGTTTGCTACTAATGGGTCTTTCGTCTGTCTGTTGCATATTATGGCACAGGACTCTCGTAAATACATATAAATAGTTTTGGGTCCAGTGTTGTACAATAAGAATCAATATTATGACCTTGCTTTGCTACTATGTACTCTCACGTTTGATGCATGTTCATTTCAAGTGAAAGGAACTGAAGAATGATGGATCCTTGAGGTCGTCTTAAGAAATGGTTCGATTGACTTTGTTCGAACTATCCTCGGGGATTAAAAAATTCAGTACATGAGTTTAGAGGTTGCATTTTGGTAGTCACATAGGAGGAATAAGAGCTCAATGCTCTCTATCCAAACTAGAATTATGCTGCCATTGTCCCAATCTAGATGTGGATTTTAGTGGAAGTTAATAAGTTTGGAATTAATATATTGGAGTTTGGAAGTTTTTGTTTAGAGTGTAGGTTGGAAGATGAAGTTTTTCGATAATTGTGAATAGTATGTAAAAATAGAAAAAAGATAGAAAGATGGAGTTACTCAATAAATGTGCAAACTTCAATAGAAAGTTTGGTTGGTGGA

mRNA sequence

TTTTAATTTCCTTTTTACAAATTGTAAGAAATGGATTTTGGTAGGGCTTATTTTGGGTAGATGTTCCATTTCCGTTATTCGTAGAACTTGGTACAATCCTCCGTTTCCAACAATTTTGATCGATCTTCATCGTCGCCCTCGCCGGAGACGATCTCTCAACCAAAAAAACTAACCATGCCGAAGAAGATGGGTGTAAACAGCAAAGCCGAGGCCGCCAGAGCACGCAAGAGCGCCGTTGAGACCGAGCGCAAGGAGCGAGAGAGTCAGCAGAAGGAGGATCAATTCTGGCGAGAAGCCGAGGGTCCCAAGTCCCGCGCTGCCAAGAAACGGGAGGATGAATCTGAGAAGCGTGCTGAGGCCGCCGCTCGAAAGGCGGAGGCACGTCGTTTGGCCGAACAGGAGGAGAAGGAATTGGAAAAAACTATGAAGAAGCCTGATAAAAAGGCGAGTAGGGTTGCACTTCCGGTCCCCAAGGTAACCGAGCTTGAATTGAGGAAGCGCAGAGAGGAGGAGCAAGCTGAGCTCCAGAGGAAGGCCGAGGAAGCTAAGAAAAAGCAGAGCCGGACGGCGGCCGAGGAGGAGTACGAGAGGATGGTGCTGGTTACCAATACTAATAGGGATGATTCAATTATTGAAGCCAGGACGGTGGAAGACGCGATTGCTCAGATTTCTGTTGCGGATAATTTGCCCGTGGATAGGCATCCAGAGCGACGGCTTAAAGCCTCTTTTAAGGCTTTCGAAGAAGCTGAGCTCCCCAGGCTGAAGGAAGAGAACCCGGTCTTACCCACAATCAGTATAAAGACATGATATGGAAGCTATGGAAGAAGTCTCCTGACAACCCTCTTAATCAGGTTGCAGCAGAGTGAGTTGATCCACATCCTTCGGCATGGGTCTGGCAGGTTTTCCCTAGATTATTAAGCCTGTTTACTAAAGCTTGGTCAAAATTTGTTATCTGACCAATTCTTCTTCAGTTCAGTTGTATCCTGGAATGTTTGGTTTGGTTTGCTACTAATGGGTCTTTCGTCTGTCTGTTGCATATTATGGCACAGGACTCTCGTAAATACATATAAATAGTTTTGGGTCCAGTGTTGTACAATAAGAATCAATATTATGACCTTGCTTTGCTACTATGTACTCTCACGTTTGATGCATGTTCATTTCAAGTGAAAGGAACTGAAGAATGATGGATCCTTGAGGTCGTCTTAAGAAATGGTTCGATTGACTTTGTTCGAACTATCCTCGGGGATTAAAAAATTCAGTACATGAGTTTAGAGGTTGCATTTTGGTAGTCACATAGGAGGAATAAGAGCTCAATGCTCTCTATCCAAACTAGAATTATGCTGCCATTGTCCCAATCTAGATGTGGATTTTAGTGGAAGTTAATAAGTTTGGAATTAATATATTGGAGTTTGGAAGTTTTTGTTTAGAGTGTAGGTTGGAAGATGAAGTTTTTCGATAATTGTGAATAGTATGTAAAAATAGAAAAAAGATAGAAAGATGGAGTTACTCAATAAATGTGCAAACTTCAATAGAAAGTTTGGTTGGTGGA

Coding sequence (CDS)

ATGCCGAAGAAGATGGGTGTAAACAGCAAAGCCGAGGCCGCCAGAGCACGCAAGAGCGCCGTTGAGACCGAGCGCAAGGAGCGAGAGAGTCAGCAGAAGGAGGATCAATTCTGGCGAGAAGCCGAGGGTCCCAAGTCCCGCGCTGCCAAGAAACGGGAGGATGAATCTGAGAAGCGTGCTGAGGCCGCCGCTCGAAAGGCGGAGGCACGTCGTTTGGCCGAACAGGAGGAGAAGGAATTGGAAAAAACTATGAAGAAGCCTGATAAAAAGGCGAGTAGGGTTGCACTTCCGGTCCCCAAGGTAACCGAGCTTGAATTGAGGAAGCGCAGAGAGGAGGAGCAAGCTGAGCTCCAGAGGAAGGCCGAGGAAGCTAAGAAAAAGCAGAGCCGGACGGCGGCCGAGGAGGAGTACGAGAGGATGGTGCTGGTTACCAATACTAATAGGGATGATTCAATTATTGAAGCCAGGACGGTGGAAGACGCGATTGCTCAGATTTCTGTTGCGGATAATTTGCCCGTGGATAGGCATCCAGAGCGACGGCTTAAAGCCTCTTTTAAGGCTTTCGAAGAAGCTGAGCTCCCCAGGCTGAAGGAAGAGAACCCGGTCTTACCCACAATCAGTATAAAGACATGA

Protein sequence

MPKKMGVNSKAEAARARKSAVETERKERESQQKEDQFWREAEGPKSRAAKKREDESEKRAEAAARKAEARRLAEQEEKELEKTMKKPDKKASRVALPVPKVTELELRKRREEEQAELQRKAEEAKKKQSRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERRLKASFKAFEEAELPRLKEENPVLPTISIKT

Homology

[Close]

BLAST of PI0020646.1 vs. ExPASy Swiss-Prot
Match: Q2TBV6 (Coiled-coil domain-containing protein 124 OS=Bos taurus OX=9913 GN=CCDC124 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.1e-17
Identity = 82/212 (38.68%), Postives = 126/212 (59.43%), Query Frame = 0


Query: 1   MPKK-MGVNSKAEAARARKSAVETERKERESQQKEDQFWREAEGPKSRAAKKREDESEKR 60
           MPKK  G N+K+ AARAR++  +     ++ ++ ED +WR+ +    R  +++E++ ++R
Sbjct: 1   MPKKFQGENTKSAAARARRAEAKAAADAKKQKELEDAYWRDEDKHVMRKEQRKEEKEKRR 60

Query: 61  AEAAARKAEARRLAEQEEKELEKTMKKPDKKASRVALPVPKVTELELRK--RREEEQAEL 120
            E   RK E +RL E+E+ +L+        KA RVA    KVT  ++ +  RR+ +  E 
Sbjct: 61  LEQLERKKETQRLLEEEDSKLK------GGKAPRVAAS-SKVTRAQIEETLRRDHQHKES 120

Query: 121 QRKAEEAKKKQSRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHP 180
              AE+A K       EE   R VL      ++  +EART+EDAIA +SV +   VDRHP
Sbjct: 121 PDPAEKA-KSHLEVPLEENVNRRVL------EEGSVEARTIEDAIAVLSVTEE-AVDRHP 180

Query: 181 ERRLKASFKAFEEAELPRLKEENPVLPTISIK 210
           ERR++A++ AFEEA+LPRLK+ENP +    +K
Sbjct: 181 ERRMRAAYTAFEEAQLPRLKQENPNMRLSQLK 197

[Close]

BLAST of PI0020646.1 vs. ExPASy Swiss-Prot
Match: Q96CT7 (Coiled-coil domain-containing protein 124 OS=Homo sapiens OX=9606 GN=CCDC124 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 7.1e-17
Identity = 82/212 (38.68%), Postives = 126/212 (59.43%), Query Frame = 0


Query: 1   MPKK-MGVNSKAEAARARKSAVETERKERESQQKEDQFWREAEGPKSRAAKKREDESEKR 60
           MPKK  G N+K+ AARAR++  +     ++ ++ ED +W++ +    R  +++E++ ++R
Sbjct: 1   MPKKFQGENTKSAAARARRAEAKAAADAKKQKELEDAYWKDDDKHVMRKEQRKEEKEKRR 60

Query: 61  AEAAARKAEARRLAEQEEKELEKTMKKPDKKASRVALPVPKVT--ELELRKRREEEQAEL 120
            +   RK E +RL E+E+ +L+        KA RVA    KVT  ++E   RR+ +  E 
Sbjct: 61  LDQLERKKETQRLLEEEDSKLK------GGKAPRVATS-SKVTRAQIEDTLRRDHQLREA 120

Query: 121 QRKAEEAKKKQSRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHP 180
              AE+A K       EE   R VL      ++  +EART+EDAIA +SVA+    DRHP
Sbjct: 121 PDTAEKA-KSHLEVPLEENVNRRVL------EEGSVEARTIEDAIAVLSVAEE-AADRHP 180

Query: 181 ERRLKASFKAFEEAELPRLKEENPVLPTISIK 210
           ERR++A+F AFEEA+LPRLK+ENP +    +K
Sbjct: 181 ERRMRAAFTAFEEAQLPRLKQENPNMRLSQLK 197

[Close]

BLAST of PI0020646.1 vs. ExPASy Swiss-Prot
Match: Q5R8X8 (Coiled-coil domain-containing protein 124 OS=Pongo abelii OX=9601 GN=CCDC124 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.6e-16
Identity = 82/212 (38.68%), Postives = 125/212 (58.96%), Query Frame = 0


Query: 1   MPKK-MGVNSKAEAARARKSAVETERKERESQQKEDQFWREAEGPKSRAAKKREDESEKR 60
           MPKK  G N+K+ AARAR++  +     ++ ++ ED +W++ +    R  +++E++ ++R
Sbjct: 1   MPKKFQGENTKSAAARARRAEAKAAADAKKQKEPEDAYWKDDDKHVMRKEQRKEEKEKRR 60

Query: 61  AEAAARKAEARRLAEQEEKELEKTMKKPDKKASRVALPVPKVT--ELELRKRREEEQAEL 120
            +   RK E +RL E+E+ +L+        KA RVA    KVT  ++E   RR+ +  E 
Sbjct: 61  LDQLERKKETQRLLEEEDSKLK------GGKAPRVATS-SKVTRAQIEDTLRRDHQLREA 120

Query: 121 QRKAEEAKKKQSRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHP 180
              AE+A K       EE   R VL      ++  +EART+EDAIA +SVA+    DRHP
Sbjct: 121 PDTAEKA-KSHLEVPLEENVNRRVL------EEGSVEARTIEDAIAVLSVAEE-AADRHP 180

Query: 181 ERRLKASFKAFEEAELPRLKEENPVLPTISIK 210
           ERR +A+F AFEEA+LPRLK+ENP +    +K
Sbjct: 181 ERRQRAAFTAFEEAQLPRLKQENPNMRLSQLK 197

[Close]

BLAST of PI0020646.1 vs. ExPASy Swiss-Prot
Match: Q9D8X2 (Coiled-coil domain-containing protein 124 OS=Mus musculus OX=10090 GN=Ccdc124 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.1e-16
Identity = 81/211 (38.39%), Postives = 122/211 (57.82%), Query Frame = 0


Query: 1   MPKK-MGVNSKAEAARARKSAVETERKERESQQKEDQFWREAEGPKSRAAKKREDESEKR 60
           MPKK  G NSK+ AARAR++  +     ++ ++ ED +W++ +    R  +++E++ ++R
Sbjct: 1   MPKKFQGENSKSAAARARRAEAKAAADAKKQKELEDAYWKDEDKHVMRKEQRKEEKEKRR 60

Query: 61  AEAAARKAEARRLAEQEEKELEKTMKKPDKKASRVALPVPKVTELELR-KRREEEQAELQ 120
            E   RK E +RL E+E+  L+        KA RVA    KVT  ++    R E++AE  
Sbjct: 61  LEQLERKKETQRLLEEEDSRLK------GGKAPRVA--PAKVTRAQIEDSLRREQRAEPV 120

Query: 121 RKAEEAKKKQSRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPE 180
            KA    K       EE   R +      +++  +EARTVEDAIA +SVA+    DRHPE
Sbjct: 121 EKA----KSHLELPLEENLNRRL------QEEGSVEARTVEDAIAVLSVAEE--ADRHPE 180

Query: 181 RRLKASFKAFEEAELPRLKEENPVLPTISIK 210
           RR++A+F AFEE +LPRLK+ENP +    +K
Sbjct: 181 RRMRAAFTAFEEVQLPRLKQENPNMRLSQLK 191

[Close]

BLAST of PI0020646.1 vs. ExPASy Swiss-Prot
Match: Q28HN4 (Coiled-coil domain-containing protein 124 OS=Xenopus tropicalis OX=8364 GN=ccdc124 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.1e-15
Identity = 76/210 (36.19%), Postives = 119/210 (56.67%), Query Frame = 0


Query: 1   MPKK-MGVNSKAEAARARKSAVETERKERESQQKEDQFWREAEGPKSRAAKKREDESEKR 60
           MPKK  G N+K+  ARARK+  +     +  ++ ED +W++ +    R  +++ED+ +KR
Sbjct: 1   MPKKFQGENTKSAVARARKAEAKAVADAKRQKEIEDAYWQDDDKHVMRKGQRKEDKEKKR 60

Query: 61  AEAAARKAEARRLAEQEEKELEKTMKKPDKKASRVALPVPKVTELELRKRREEEQAELQR 120
            E   RK E++RL E+E+ +++    KP K A+       KVT  ++ +    E+ E  +
Sbjct: 61  LEQLERKKESQRLLEEEDSKMK---GKPIKPAA-----PSKVTRAQIEETLHREEEE--K 120

Query: 121 KAEEAKKKQSRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPER 180
              E  K       EE   R +L      ++  +EARTVEDAIA +S++  L  DRHPER
Sbjct: 121 AISEKPKTHLEIPLEENLNRRIL------EEGEVEARTVEDAIAALSMSKEL--DRHPER 180

Query: 181 RLKASFKAFEEAELPRLKEENPVLPTISIK 210
           R+KA+F AFEE  +PR+K+ENP +    +K
Sbjct: 181 RMKAAFTAFEEINMPRIKQENPNMRLSQLK 192

[Close]

BLAST of PI0020646.1 vs. ExPASy TrEMBL
Match: A0A5D3DID7 (Coiled-coil domain-containing protein 124 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G004160 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.7e-88
Identity = 197/203 (97.04%), Postives = 199/203 (98.03%), Query Frame = 0


Query: 1   MPKKMGVNSKAEAARARKSAVETERKERESQQKEDQFWREAEGPKSRAAKKREDESEKRA 60
           MPKKMGVNSKAEAARARKSAVETERKERESQQKEDQFWREAEGPKSRAAKKREDESEKRA
Sbjct: 1   MPKKMGVNSKAEAARARKSAVETERKERESQQKEDQFWREAEGPKSRAAKKREDESEKRA 60

Query: 61  EAAARKAEARRLAEQEEKELEKTMKKPDKKASRVALPVPKVTELELRKRREEEQAELQRK 120
           EAAARKAEARRLAEQE+KELEK MKKPDKKASRVA+PVPKVTELELRKRREEEQAELQRK
Sbjct: 61  EAAARKAEARRLAEQEDKELEKAMKKPDKKASRVAIPVPKVTELELRKRREEEQAELQRK 120

Query: 121 AEEAKKKQSRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR 180
           AEEAKKK SRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR
Sbjct: 121 AEEAKKKLSRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR 180

Query: 181 LKASFKAFEEAELPRLKEENPVL 204
           LKASFKAFEEAELPRLKEE P L
Sbjct: 181 LKASFKAFEEAELPRLKEEKPGL 203

[Close]

BLAST of PI0020646.1 vs. ExPASy TrEMBL
Match: A0A1S3BJ47 (coiled-coil domain-containing protein 124 OS=Cucumis melo OX=3656 GN=LOC103490249 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.7e-88
Identity = 197/203 (97.04%), Postives = 199/203 (98.03%), Query Frame = 0


Query: 1   MPKKMGVNSKAEAARARKSAVETERKERESQQKEDQFWREAEGPKSRAAKKREDESEKRA 60
           MPKKMGVNSKAEAARARKSAVETERKERESQQKEDQFWREAEGPKSRAAKKREDESEKRA
Sbjct: 1   MPKKMGVNSKAEAARARKSAVETERKERESQQKEDQFWREAEGPKSRAAKKREDESEKRA 60

Query: 61  EAAARKAEARRLAEQEEKELEKTMKKPDKKASRVALPVPKVTELELRKRREEEQAELQRK 120
           EAAARKAEARRLAEQE+KELEK MKKPDKKASRVA+PVPKVTELELRKRREEEQAELQRK
Sbjct: 61  EAAARKAEARRLAEQEDKELEKAMKKPDKKASRVAIPVPKVTELELRKRREEEQAELQRK 120

Query: 121 AEEAKKKQSRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR 180
           AEEAKKK SRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR
Sbjct: 121 AEEAKKKLSRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR 180

Query: 181 LKASFKAFEEAELPRLKEENPVL 204
           LKASFKAFEEAELPRLKEE P L
Sbjct: 181 LKASFKAFEEAELPRLKEEKPGL 203

[Close]

BLAST of PI0020646.1 vs. ExPASy TrEMBL
Match: A0A0A0K4S7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G018740 PE=3 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 8.8e-87
Identity = 193/203 (95.07%), Postives = 198/203 (97.54%), Query Frame = 0


Query: 1   MPKKMGVNSKAEAARARKSAVETERKERESQQKEDQFWREAEGPKSRAAKKREDESEKRA 60
           MPKKMGVNSKAEAARARKSAVETERKERE+QQKEDQFWREAEGPKSRAAKKREDESEKRA
Sbjct: 1   MPKKMGVNSKAEAARARKSAVETERKERETQQKEDQFWREAEGPKSRAAKKREDESEKRA 60

Query: 61  EAAARKAEARRLAEQEEKELEKTMKKPDKKASRVALPVPKVTELELRKRREEEQAELQRK 120
           EAAARKAEARRLA+QEEKELEK MKKPDKKASRV +PVPKVTELELRKRREEEQAELQ+K
Sbjct: 61  EAAARKAEARRLADQEEKELEKAMKKPDKKASRVTIPVPKVTELELRKRREEEQAELQKK 120

Query: 121 AEEAKKKQSRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR 180
           A+EAKKK SRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR
Sbjct: 121 ADEAKKKLSRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR 180

Query: 181 LKASFKAFEEAELPRLKEENPVL 204
           LKASFKAFEEAELPRLKEE P L
Sbjct: 181 LKASFKAFEEAELPRLKEEKPGL 203

[Close]

BLAST of PI0020646.1 vs. ExPASy TrEMBL
Match: A0A6J1GNJ0 (coiled-coil domain-containing protein 124-like OS=Cucurbita moschata OX=3662 GN=LOC111455569 PE=3 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 1.1e-84
Identity = 187/203 (92.12%), Postives = 199/203 (98.03%), Query Frame = 0


Query: 1   MPKKMGVNSKAEAARARKSAVETERKERESQQKEDQFWREAEGPKSRAAKKREDESEKRA 60
           MPKKMGVNSKAEAARARKSAVETERKERE+++K DQ+W+EAEGPKSRAAKKREDESEKRA
Sbjct: 1   MPKKMGVNSKAEAARARKSAVETERKERETREKVDQYWKEAEGPKSRAAKKREDESEKRA 60

Query: 61  EAAARKAEARRLAEQEEKELEKTMKKPDKKASRVALPVPKVTELELRKRREEEQAELQRK 120
           EAAARKAEARRLAEQEEKELEK MKKPDKKA+RV++PVPKVTELELRKRREEEQAELQRK
Sbjct: 61  EAAARKAEARRLAEQEEKELEKAMKKPDKKANRVSIPVPKVTELELRKRREEEQAELQRK 120

Query: 121 AEEAKKKQSRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR 180
           AEEAKK+QSRTAAEEEYERM+LVTNTNRDDSIIEART+EDAIAQISVADNLP+DRHPERR
Sbjct: 121 AEEAKKRQSRTAAEEEYERMLLVTNTNRDDSIIEARTLEDAIAQISVADNLPMDRHPERR 180

Query: 181 LKASFKAFEEAELPRLKEENPVL 204
           LKASFKAFEEAELPRLKEE P L
Sbjct: 181 LKASFKAFEEAELPRLKEEKPGL 203

[Close]

BLAST of PI0020646.1 vs. ExPASy TrEMBL
Match: A0A6J1C3L0 (coiled-coil domain-containing protein 124 OS=Momordica charantia OX=3673 GN=LOC111008038 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.1e-81
Identity = 182/203 (89.66%), Postives = 193/203 (95.07%), Query Frame = 0


Query: 1   MPKKMGVNSKAEAARARKSAVETERKERESQQKEDQFWREAEGPKSRAAKKREDESEKRA 60
           MPKKMGVNSKAEAARARKSAVE ERK+RE+++K DQ+WREAEGPKSRAAKKREDESEKRA
Sbjct: 1   MPKKMGVNSKAEAARARKSAVEVERKDRENREKVDQYWREAEGPKSRAAKKREDESEKRA 60

Query: 61  EAAARKAEARRLAEQEEKELEKTMKKPDKKASRVALPVPKVTELELRKRREEEQAELQRK 120
           EAAARKAE RRLAEQE+KELEK MKKPDKKA+RV++PVPKVTE+ELR+RREEEQAELQRK
Sbjct: 61  EAAARKAEIRRLAEQEDKELEKAMKKPDKKATRVSIPVPKVTEVELRRRREEEQAELQRK 120

Query: 121 AEEAKKKQSRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR 180
            EEAKK QSRTAAEEEYERMVLV NTNRDDSIIEARTVEDAIAQISV DNLPVDRHPERR
Sbjct: 121 VEEAKKMQSRTAAEEEYERMVLVNNTNRDDSIIEARTVEDAIAQISVTDNLPVDRHPERR 180

Query: 181 LKASFKAFEEAELPRLKEENPVL 204
           LKASFKAFEEAELPRLKEE P L
Sbjct: 181 LKASFKAFEEAELPRLKEEKPGL 203

[Close]

BLAST of PI0020646.1 vs. NCBI nr
Match: XP_008447903.1 (PREDICTED: coiled-coil domain-containing protein 124 [Cucumis melo] >KAA0040351.1 coiled-coil domain-containing protein 124 [Cucumis melo var. makuwa] >TYK23353.1 coiled-coil domain-containing protein 124 [Cucumis melo var. makuwa])

HSP 1 Score: 334.7 bits (857), Expect = 5.6e-88
Identity = 197/203 (97.04%), Postives = 199/203 (98.03%), Query Frame = 0


Query: 1   MPKKMGVNSKAEAARARKSAVETERKERESQQKEDQFWREAEGPKSRAAKKREDESEKRA 60
           MPKKMGVNSKAEAARARKSAVETERKERESQQKEDQFWREAEGPKSRAAKKREDESEKRA
Sbjct: 1   MPKKMGVNSKAEAARARKSAVETERKERESQQKEDQFWREAEGPKSRAAKKREDESEKRA 60

Query: 61  EAAARKAEARRLAEQEEKELEKTMKKPDKKASRVALPVPKVTELELRKRREEEQAELQRK 120
           EAAARKAEARRLAEQE+KELEK MKKPDKKASRVA+PVPKVTELELRKRREEEQAELQRK
Sbjct: 61  EAAARKAEARRLAEQEDKELEKAMKKPDKKASRVAIPVPKVTELELRKRREEEQAELQRK 120

Query: 121 AEEAKKKQSRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR 180
           AEEAKKK SRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR
Sbjct: 121 AEEAKKKLSRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR 180

Query: 181 LKASFKAFEEAELPRLKEENPVL 204
           LKASFKAFEEAELPRLKEE P L
Sbjct: 181 LKASFKAFEEAELPRLKEEKPGL 203

[Close]

BLAST of PI0020646.1 vs. NCBI nr
Match: XP_038888989.1 (coiled-coil domain-containing protein 124 [Benincasa hispida])

HSP 1 Score: 329.7 bits (844), Expect = 1.8e-86
Identity = 193/203 (95.07%), Postives = 198/203 (97.54%), Query Frame = 0


Query: 1   MPKKMGVNSKAEAARARKSAVETERKERESQQKEDQFWREAEGPKSRAAKKREDESEKRA 60
           MPKKMGVNSKAEAARARKSAVETERKERE+Q K DQFWREAEGPKSRAAKKREDESEKRA
Sbjct: 1   MPKKMGVNSKAEAARARKSAVETERKERENQAKVDQFWREAEGPKSRAAKKREDESEKRA 60

Query: 61  EAAARKAEARRLAEQEEKELEKTMKKPDKKASRVALPVPKVTELELRKRREEEQAELQRK 120
           EAAARKAEARRLAEQEEKELEK MKKPDKKA+RV++PVPKVTELELRKRREEEQAELQRK
Sbjct: 61  EAAARKAEARRLAEQEEKELEKAMKKPDKKANRVSIPVPKVTELELRKRREEEQAELQRK 120

Query: 121 AEEAKKKQSRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR 180
           AEEAKKKQSRTAAEEEYERMVLVTNTNRDDS+IEARTVEDAIAQISVADNLPVDRHPERR
Sbjct: 121 AEEAKKKQSRTAAEEEYERMVLVTNTNRDDSVIEARTVEDAIAQISVADNLPVDRHPERR 180

Query: 181 LKASFKAFEEAELPRLKEENPVL 204
           LKASFKAFEEAELPRLKEE P L
Sbjct: 181 LKASFKAFEEAELPRLKEEKPGL 203

[Close]

BLAST of PI0020646.1 vs. NCBI nr
Match: XP_004144873.1 (coiled-coil domain-containing protein 124 [Cucumis sativus] >KGN43292.1 hypothetical protein Csa_020479 [Cucumis sativus])

HSP 1 Score: 329.7 bits (844), Expect = 1.8e-86
Identity = 193/203 (95.07%), Postives = 198/203 (97.54%), Query Frame = 0


Query: 1   MPKKMGVNSKAEAARARKSAVETERKERESQQKEDQFWREAEGPKSRAAKKREDESEKRA 60
           MPKKMGVNSKAEAARARKSAVETERKERE+QQKEDQFWREAEGPKSRAAKKREDESEKRA
Sbjct: 1   MPKKMGVNSKAEAARARKSAVETERKERETQQKEDQFWREAEGPKSRAAKKREDESEKRA 60

Query: 61  EAAARKAEARRLAEQEEKELEKTMKKPDKKASRVALPVPKVTELELRKRREEEQAELQRK 120
           EAAARKAEARRLA+QEEKELEK MKKPDKKASRV +PVPKVTELELRKRREEEQAELQ+K
Sbjct: 61  EAAARKAEARRLADQEEKELEKAMKKPDKKASRVTIPVPKVTELELRKRREEEQAELQKK 120

Query: 121 AEEAKKKQSRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR 180
           A+EAKKK SRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR
Sbjct: 121 ADEAKKKLSRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR 180

Query: 181 LKASFKAFEEAELPRLKEENPVL 204
           LKASFKAFEEAELPRLKEE P L
Sbjct: 181 LKASFKAFEEAELPRLKEEKPGL 203

[Close]

BLAST of PI0020646.1 vs. NCBI nr
Match: KAG7011791.1 (Coiled-coil domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323.9 bits (829), Expect = 1.0e-84
Identity = 188/203 (92.61%), Postives = 199/203 (98.03%), Query Frame = 0


Query: 1   MPKKMGVNSKAEAARARKSAVETERKERESQQKEDQFWREAEGPKSRAAKKREDESEKRA 60
           MPKKMGVNSKAEAARARKSAVETERKERE+++K DQ+W+EAEGPKSRAAKKREDESEKRA
Sbjct: 1   MPKKMGVNSKAEAARARKSAVETERKERETREKVDQYWKEAEGPKSRAAKKREDESEKRA 60

Query: 61  EAAARKAEARRLAEQEEKELEKTMKKPDKKASRVALPVPKVTELELRKRREEEQAELQRK 120
           EAAARKAEARRLAEQEEKELEK MKKPDKKA+RV++PVPKVTELELRKRREEEQAELQRK
Sbjct: 61  EAAARKAEARRLAEQEEKELEKAMKKPDKKANRVSIPVPKVTELELRKRREEEQAELQRK 120

Query: 121 AEEAKKKQSRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR 180
           AEEAKK+QSRTAAEEEYERMVLVTNTNRDDSIIEART+EDAIAQISVADNLP+DRHPERR
Sbjct: 121 AEEAKKRQSRTAAEEEYERMVLVTNTNRDDSIIEARTLEDAIAQISVADNLPMDRHPERR 180

Query: 181 LKASFKAFEEAELPRLKEENPVL 204
           LKASFKAFEEAELPRLKEE P L
Sbjct: 181 LKASFKAFEEAELPRLKEEKPGL 203

[Close]

BLAST of PI0020646.1 vs. NCBI nr
Match: XP_023554123.1 (coiled-coil domain-containing protein 124-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.6 bits (828), Expect = 1.3e-84
Identity = 188/203 (92.61%), Postives = 199/203 (98.03%), Query Frame = 0


Query: 1   MPKKMGVNSKAEAARARKSAVETERKERESQQKEDQFWREAEGPKSRAAKKREDESEKRA 60
           MPKKMGVNSKAEAARARKSAVETERKERE+++K DQ+W+EAEGPKSRAAKKREDESEKRA
Sbjct: 1   MPKKMGVNSKAEAARARKSAVETERKERETREKVDQYWKEAEGPKSRAAKKREDESEKRA 60

Query: 61  EAAARKAEARRLAEQEEKELEKTMKKPDKKASRVALPVPKVTELELRKRREEEQAELQRK 120
           EAAARKAEARRLAEQEEKELEK +KKPDKKA+RV++PVPKVTELELRKRREEEQAELQRK
Sbjct: 61  EAAARKAEARRLAEQEEKELEKAIKKPDKKANRVSIPVPKVTELELRKRREEEQAELQRK 120

Query: 121 AEEAKKKQSRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR 180
           AEEAKK+QSRTAAEEEYERMVLVTNTNRDDSIIEART+EDAIAQISVADNLPVDRHPERR
Sbjct: 121 AEEAKKRQSRTAAEEEYERMVLVTNTNRDDSIIEARTLEDAIAQISVADNLPVDRHPERR 180

Query: 181 LKASFKAFEEAELPRLKEENPVL 204
           LKASFKAFEEAELPRLKEE P L
Sbjct: 181 LKASFKAFEEAELPRLKEEKPGL 203

[Close]

BLAST of PI0020646.1 vs. TAIR 10
Match: AT1G16210.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1014 (InterPro:IPR010422); Has 16107 Blast hits to 8386 proteins in 1107 species: Archae - 26; Bacteria - 3370; Metazoa - 4013; Fungi - 1516; Plants - 526; Viruses - 120; Other Eukaryotes - 6536 (source: NCBI BLink). )

HSP 1 Score: 261.9 bits (668), Expect = 4.3e-70
Identity = 145/203 (71.43%), Postives = 183/203 (90.15%), Query Frame = 0


Query: 1   MPKKMGVNSKAEAARARKSAVETERKERESQQKEDQFWREAEGPKSRAAKKREDESEKRA 60
           MPKKMG+NSKAE A++RK+A E E+K+R++++KE+Q+WREAEGPKS+A KKRE+E+EK+A
Sbjct: 1   MPKKMGLNSKAEVAKSRKNAAEAEQKDRQTREKEEQYWREAEGPKSKAVKKREEEAEKKA 60

Query: 61  EAAARKAEARRLAEQEEKELEKTMKKPDKKASRVALPVPKVTELELRKRREEEQAELQRK 120
           E AA+K EA+RLAEQEEKELEK +KKPDKKA+RV +PVPKVTE EL +RREE+Q  L +K
Sbjct: 61  ETAAKKLEAKRLAEQEEKELEKALKKPDKKANRVTVPVPKVTEAELIRRREEDQVALAKK 120

Query: 121 AEEAKKKQSRTAAEEEYERMVLVTNTNRDDSIIEARTVEDAIAQISVADNLPVDRHPERR 180
           AE++KKKQ+R A E+EYE+MVLVTNTNRDDS+IEA TV++A+A+I+V+DNLPVDRHPE+R
Sbjct: 121 AEDSKKKQTRMAGEDEYEKMVLVTNTNRDDSLIEAHTVDEALARITVSDNLPVDRHPEKR 180

Query: 181 LKASFKAFEEAELPRLKEENPVL 204
           LKASFKA+EE ELPRLK E P L
Sbjct: 181 LKASFKAYEEVELPRLKSEKPGL 203

The following BLAST results are available for this feature:

BLAST of PI0020646.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2TBV6	1.1e-17	38.68	Coiled-coil domain-containing protein 124 OS=Bos taurus OX=9913 GN=CCDC124 PE=2 ...	[more]
Q96CT7	7.1e-17	38.68	Coiled-coil domain-containing protein 124 OS=Homo sapiens OX=9606 GN=CCDC124 PE=...	[more]
Q5R8X8	1.6e-16	38.68	Coiled-coil domain-containing protein 124 OS=Pongo abelii OX=9601 GN=CCDC124 PE=...	[more]
Q9D8X2	2.1e-16	38.39	Coiled-coil domain-containing protein 124 OS=Mus musculus OX=10090 GN=Ccdc124 PE...	[more]
Q28HN4	5.1e-15	36.19	Coiled-coil domain-containing protein 124 OS=Xenopus tropicalis OX=8364 GN=ccdc1...	[more]

BLAST of PI0020646.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DID7	2.7e-88	97.04	Coiled-coil domain-containing protein 124 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3BJ47	2.7e-88	97.04	coiled-coil domain-containing protein 124 OS=Cucumis melo OX=3656 GN=LOC10349024...	[more]
A0A0A0K4S7	8.8e-87	95.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G018740 PE=3 SV=1	[more]
A0A6J1GNJ0	1.1e-84	92.12	coiled-coil domain-containing protein 124-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1C3L0	1.1e-81	89.66	coiled-coil domain-containing protein 124 OS=Momordica charantia OX=3673 GN=LOC1...	[more]

BLAST of PI0020646.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447903.1	5.6e-88	97.04	PREDICTED: coiled-coil domain-containing protein 124 [Cucumis melo] >KAA0040351....	[more]
XP_038888989.1	1.8e-86	95.07	coiled-coil domain-containing protein 124 [Benincasa hispida]	[more]
XP_004144873.1	1.8e-86	95.07	coiled-coil domain-containing protein 124 [Cucumis sativus] >KGN43292.1 hypothet...	[more]
KAG7011791.1	1.0e-84	92.61	Coiled-coil domain-containing protein [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_023554123.1	1.3e-84	92.61	coiled-coil domain-containing protein 124-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0020646.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16210.1	4.3e-70	71.43	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1014...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 50..86
None	No IPR available	COILS	Coil	Coil	coord: 101..134
None	No IPR available	COILS	Coil	Coil	coord: 11..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..136
None	No IPR available	PANTHER	PTHR21680:SF1	OS04G0561600 PROTEIN	coord: 1..203
IPR010422	Coiled-coil domain-containing protein 124/Oxs1	PFAM	PF06244	Ccdc124	coord: 108..203 e-value: 5.4E-24 score: 85.2
IPR010422	Coiled-coil domain-containing protein 124/Oxs1	PANTHER	PTHR21680	UNCHARACTERIZED	coord: 1..203

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0020646	PI0020646	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0020646.1-exon	PI0020646.1-exon-chr01:4849645..4850342	exon
PI0020646.1-exon	PI0020646.1-exon-chr01:4850436..4850554	exon
PI0020646.1-exon	PI0020646.1-exon-chr01:4852624..4853355	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0020646.1-three_prime_utr	PI0020646.1-three_prime_utr-chr01:4849645..4850342	three_prime_UTR
PI0020646.1-three_prime_utr	PI0020646.1-three_prime_utr-chr01:4850436..4850479	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0020646.1-cds	PI0020646.1-cds-chr01:4850480..4850554	CDS
PI0020646.1-cds	PI0020646.1-cds-chr01:4852624..4853181	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0020646.1-five_prime_utr	PI0020646.1-five_prime_utr-chr01:4853182..4853355	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0020646.1	PI0020646.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006366	transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003713	transcription coactivator activity