PI0019891.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0019891.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Heat shock protein DnaJ, cysteine-rich domain containing protein
Location	chr05: 1124769 .. 1126487 (-)
Sequence length	777
RNA-Seq Expression	PI0019891.1
Synteny	PI0019891.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTTATCTCCTCTTCTATTGTATCTGACTTCGCGCCATCCACCGCCGGTGGACTCTTTCACCAGAAATGATACCGAGGCAATTGCGAACAATCTTCGCCGGCGCCGCCGTCATCCTCGGCGGAATTTGCACTCTCAACTTCGCTTCTTTTCTCACTATTCAAACCCTTCGTCTTACTGCTGAAGCCAAACGGGTAATTCATTTTCTTCTAGGACTACGTATCGTTTCTAAACTAAATCTGTATGTTGGGAATGAAAGAAGATTCGTAAATTCTGAACCAGTTCTTTAATACTATTCTATTGGGTTTTTCGGTTTCTCTGCAGAGAAAGATTGCTTTGCCCTGTAAAGCTTGTAGAGGAAAAGGCTTCTATGTATGCAAATTATGCGGAGGAAATGCTGTCATTCAGTGGTCGCCATTGTCTGATCCTATTGCCATGAACCCCTGTGTGTGTCCTACTTGCGAGGGAAACAGGTTATACTTTCACCCCTTTCATTTCCCCAGCAGTTTGTTAAAATCTTCCCAGGGCTAAATGAATGGCATTTGCATTCTTTGTTATTATCTCTGTAGATTCCATGCTCATGTCATTTCTTATCCAGATTCTCATGTGGATTAAGAAAATTATGCTGAACCCTAATGATATTTGTGTGTATTTAGTTTGTTGAGAAAAAGTGAAGAAGGAATAACTCGTCTTAAGTTGAATCAAAACAATCGTTTTAAAAAGTTGAGATTTTAAAGCTCTCTCTAATTAGTCCTGTATTGGAATTGACTGATTATAAACACAAAAGGGTAATTGGTAAAATTTTGCCTATTTCTATGAAAGTTTTTGGCTGGGCTGATATACCATTGGTTTATGTTTTCGGGCGGTGATGTGTTTTCTCACTACTGTTGTTTATTTACTGCATCATTTGATATTGCAGGGTACAACGTTGCCTAAATTGCCTAGGTAAAGGATATGAAGTATGATTGAACTATGACATTGACAACAAGTGTGAATTGGCCTATATGTTTTTCAGAAAGTAAGTGATTTATCTTTGTGTTGAATTGGTTATTTTTCAGAGTTTTCACTTGATAATAGTAATCTATGGGATGATATAGCTTTTTGTATAATTGTATCGGCTATCATATTAGCAAGAGCACTCTATATCTGATGCTTTTAATCGTCAGTGTACACTTAGCAATTTTGGGAGGGATTTTAGTGAGATTGCTGTAATTTATGCTTTTGTATAGTTGTATTTGGTCTTCATTTTCGCGAGAAGACTGTATAGTTTGTTGGCAAAGTTGTTTAGAAACTCATACTTGTCACAGATATTAAGCATCAGAAAGTTGTCTTAGTTGTTAAAATTTATTAAGGGGTCTGAAGATGTCAAGAACTTTGTGTTCAGAAAAGAAACATCTAGGAGTCAAGTGAACTCTGCTGAACATGGATAGAGCACCAGTGAAACTGCTACTGGACATGTGAGAATATGGCTGTTCTCTAAAACTATCACGATTAGTGATCTAAATTCATTAACAATTCTATGACTTGTACGATCATTCAATCAACTATGAGTATTACACTCGTATAATCTTATAACCTTATGTAATAGATCTTAATCTTTCTTTATCTAGGCTCTTGGATGTGGTCTTACTTTGGCTGCCTGGTTGTTCTCGTTAGGCACATAGCCCTTAATTCATTATGTTGCCCATCCTAGGTTGGCCAATGGTCAAGAAAGGCCATG

mRNA sequence

CTCTTATCTCCTCTTCTATTGTATCTGACTTCGCGCCATCCACCGCCGGTGGACTCTTTCACCAGAAATGATACCGAGGCAATTGCGAACAATCTTCGCCGGCGCCGCCGTCATCCTCGGCGGAATTTGCACTCTCAACTTCGCTTCTTTTCTCACTATTCAAACCCTTCGTCTTACTGCTGAAGCCAAACGGAGAAAGATTGCTTTGCCCTGTAAAGCTTGTAGAGGAAAAGGCTTCTATGTATGCAAATTATGCGGAGGAAATGCTGTCATTCAGTGGTCGCCATTGTCTGATCCTATTGCCATGAACCCCTGTGTGTGTCCTACTTGCGAGGGAAACAGGGTACAACGTTGCCTAAATTGCCTAGGTAAAGGATATGAAGTATGATTGAACTATGACATTGACAACAAGTGTGAATTGGCCTATATGTTTTTCAGAAAAAAAGAAACATCTAGGAGTCAAGTGAACTCTGCTGAACATGGATAGAGCACCAGTGAAACTGCTACTGGACATGTGAGAATATGGCTGTTCTCTAAAACTATCACGATTAGTGATCTAAATTCATTAACAATTCTATGACTTGTACGATCATTCAATCAACTATGAGTATTACACTCGTATAATCTTATAACCTTATGTAATAGATCTTAATCTTTCTTTATCTAGGCTCTTGGATGTGGTCTTACTTTGGCTGCCTGGTTGTTCTCGTTAGGCACATAGCCCTTAATTCATTATGTTGCCCATCCTAGGTTGGCCAATGGTCAAGAAAGGCCATG

Coding sequence (CDS)

ATGATACCGAGGCAATTGCGAACAATCTTCGCCGGCGCCGCCGTCATCCTCGGCGGAATTTGCACTCTCAACTTCGCTTCTTTTCTCACTATTCAAACCCTTCGTCTTACTGCTGAAGCCAAACGGAGAAAGATTGCTTTGCCCTGTAAAGCTTGTAGAGGAAAAGGCTTCTATGTATGCAAATTATGCGGAGGAAATGCTGTCATTCAGTGGTCGCCATTGTCTGATCCTATTGCCATGAACCCCTGTGTGTGTCCTACTTGCGAGGGAAACAGGGTACAACGTTGCCTAAATTGCCTAGGTAAAGGATATGAAGTATGA

Protein sequence

MIPRQLRTIFAGAAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYVCKLCGGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV

Homology

[Close]

BLAST of PI0019891.1 vs. ExPASy TrEMBL
Match: A0A6J1CNQ8 (uncharacterized protein LOC111012944 OS=Momordica charantia OX=3673 GN=LOC111012944 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.1e-53
Identity = 101/106 (95.28%), Postives = 103/106 (97.17%), Query Frame = 0


Query: 1   MIPRQLRTIFAGAAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYVC 60
           MIPRQLRT+F GAAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFY+C
Sbjct: 1   MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60

Query: 61  KLCGGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 107
           KLC GNAVI WSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV
Sbjct: 61  KLCRGNAVIHWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 106

[Close]

BLAST of PI0019891.1 vs. ExPASy TrEMBL
Match: A0A1S3C6K9 (uncharacterized protein LOC103497424 OS=Cucumis melo OX=3656 GN=LOC103497424 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.1e-53
Identity = 102/106 (96.23%), Postives = 103/106 (97.17%), Query Frame = 0


Query: 1   MIPRQLRTIFAGAAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYVC 60
           MIPRQLRTIF GAAVILGGICTLN ASFLTIQTLRLTAEAKRRKIALPCKACRGKGFY+C
Sbjct: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60

Query: 61  KLCGGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 107
           KLC GNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV
Sbjct: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 106

[Close]

BLAST of PI0019891.1 vs. ExPASy TrEMBL
Match: A0A0A0LI05 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006050 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.2e-52
Identity = 100/106 (94.34%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 1   MIPRQLRTIFAGAAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYVC 60
           MIPRQLRTIF GAAVILGGICTLN ASFLTIQTLR+TAEAKRRKI LPCKACRGKGFY+C
Sbjct: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRVTAEAKRRKIGLPCKACRGKGFYMC 60

Query: 61  KLCGGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 107
           KLC GNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV
Sbjct: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 106

[Close]

BLAST of PI0019891.1 vs. ExPASy TrEMBL
Match: A0A5D3BFD4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00060 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.7e-44
Identity = 88/92 (95.65%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 1  MIPRQLRTIFAGAAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYVC 60
          MIPRQLRTIF GAAVILGGICTLN ASFLTIQTLRLTAEAKRRKIALPCKACRGKGFY+C
Sbjct: 1  MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60

Query: 61 KLCGGNAVIQWSPLSDPIAMNPCVCPTCEGNR 93
          KLC GNAVIQWSPLSDPIAMNPCVCPTCEGNR
Sbjct: 61 KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNR 92

[Close]

BLAST of PI0019891.1 vs. ExPASy TrEMBL
Match: A0A6P4BUI7 (uncharacterized protein LOC107435933 OS=Ziziphus jujuba OX=326968 GN=LOC107435933 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.3e-42
Identity = 79/105 (75.24%), Postives = 91/105 (86.67%), Query Frame = 0


Query: 1   MIPRQLRTIFAGAAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYVC 60
           MIP+QLRT+  GAAVILGGI TLN  S  TI TLRL  EAKRRK+ALPC+ C+GKGFY+C
Sbjct: 1   MIPKQLRTMATGAAVILGGIFTLNLVSSATIATLRLATEAKRRKVALPCRVCKGKGFYIC 60

Query: 61  KLCGGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYE 106
           +LC GNA IQWSPL DP+A+NPC+CPTC+GNRVQRCLNCLGKGY+
Sbjct: 61  RLCKGNATIQWSPLYDPVAINPCLCPTCDGNRVQRCLNCLGKGYD 105

[Close]

BLAST of PI0019891.1 vs. NCBI nr
Match: XP_038889623.1 (uncharacterized protein LOC120079492 [Benincasa hispida])

HSP 1 Score: 219.5 bits (558), Expect = 1.3e-53
Identity = 101/106 (95.28%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 1   MIPRQLRTIFAGAAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYVC 60
           MIP+QLRT+F GAAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFY+C
Sbjct: 1   MIPKQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60

Query: 61  KLCGGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 107
           KLC GNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV
Sbjct: 61  KLCQGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 106

[Close]

BLAST of PI0019891.1 vs. NCBI nr
Match: XP_008457839.1 (PREDICTED: uncharacterized protein LOC103497424 [Cucumis melo])

HSP 1 Score: 218.8 bits (556), Expect = 2.3e-53
Identity = 102/106 (96.23%), Postives = 103/106 (97.17%), Query Frame = 0


Query: 1   MIPRQLRTIFAGAAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYVC 60
           MIPRQLRTIF GAAVILGGICTLN ASFLTIQTLRLTAEAKRRKIALPCKACRGKGFY+C
Sbjct: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60

Query: 61  KLCGGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 107
           KLC GNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV
Sbjct: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 106

[Close]

BLAST of PI0019891.1 vs. NCBI nr
Match: XP_022142951.1 (uncharacterized protein LOC111012944 [Momordica charantia])

HSP 1 Score: 218.8 bits (556), Expect = 2.3e-53
Identity = 101/106 (95.28%), Postives = 103/106 (97.17%), Query Frame = 0


Query: 1   MIPRQLRTIFAGAAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYVC 60
           MIPRQLRT+F GAAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFY+C
Sbjct: 1   MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60

Query: 61  KLCGGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 107
           KLC GNAVI WSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV
Sbjct: 61  KLCRGNAVIHWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 106

[Close]

BLAST of PI0019891.1 vs. NCBI nr
Match: XP_004139324.1 (uncharacterized protein LOC101203873 [Cucumis sativus] >KGN60659.1 hypothetical protein Csa_019507 [Cucumis sativus])

HSP 1 Score: 215.3 bits (547), Expect = 2.5e-52
Identity = 100/106 (94.34%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 1   MIPRQLRTIFAGAAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYVC 60
           MIPRQLRTIF GAAVILGGICTLN ASFLTIQTLR+TAEAKRRKI LPCKACRGKGFY+C
Sbjct: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRVTAEAKRRKIGLPCKACRGKGFYMC 60

Query: 61  KLCGGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 107
           KLC GNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV
Sbjct: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 106

[Close]

BLAST of PI0019891.1 vs. NCBI nr
Match: KAG7021261.1 (hypothetical protein SDJN02_17949 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 206.8 bits (525), Expect = 9.0e-50
Identity = 96/106 (90.57%), Postives = 99/106 (93.40%), Query Frame = 0


Query: 1   MIPRQLRTIFAGAAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYVC 60
           M+PRQLRTIF GAAVI GGI TL FASFLTIQTLR TAEAKRRKIALPC+ACRGKGFY+C
Sbjct: 1   MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYIC 60

Query: 61  KLCGGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 107
           KLC GNAVIQWSPLSDPIAMNPCVCPTCEGNRVQ CLNCLGKGYEV
Sbjct: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCLGKGYEV 106

[Close]

BLAST of PI0019891.1 vs. TAIR 10
Match: AT5G20220.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 45.1 bits (105), Expect = 4.2e-05
Identity = 22/55 (40.00%), Postives = 27/55 (49.09%), Query Frame = 0


Query: 47  LPCKACRGKGFYVCKLCGGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLG 102
           LPC  CRG+G+  C  CG    I+ S L          CP C+G  +  CL CLG
Sbjct: 90  LPCPTCRGRGYTSCSNCG----IERSRLD---------CPQCKGKGIMTCLRCLG 131

[Close]

BLAST of PI0019891.1 vs. TAIR 10
Match: AT5G20220.2 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 45.1 bits (105), Expect = 4.2e-05
Identity = 22/55 (40.00%), Postives = 27/55 (49.09%), Query Frame = 0


Query: 47  LPCKACRGKGFYVCKLCGGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLG 102
           LPC  CRG+G+  C  CG    I+ S L          CP C+G  +  CL CLG
Sbjct: 90  LPCPTCRGRGYTSCSNCG----IERSRLD---------CPQCKGKGIMTCLRCLG 131

[Close]

BLAST of PI0019891.1 vs. TAIR 10
Match: AT2G34860.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 42.0 bits (97), Expect = 3.6e-04
Identity = 28/94 (29.79%), Postives = 41/94 (43.62%), Query Frame = 0


Query: 13  AAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYVCKLCGGNAVIQWS 72
           A V        N  +F+++Q    +A A  +K    C+ C+G G  +C +CGG    +W 
Sbjct: 70  ACVCASAALISNSYTFVSVQ----SAAALDKKPGGSCRNCQGSGAVLCDMCGGTG--KWK 129

Query: 73  PLSDPIAMNP---CVCPTCEGNRVQRCLNCLGKG 104
            L+   A +      CP C G     C  CLG G
Sbjct: 130 ALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTG 157

[Close]

BLAST of PI0019891.1 vs. TAIR 10
Match: AT2G34860.2 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 42.0 bits (97), Expect = 3.6e-04
Identity = 28/94 (29.79%), Postives = 41/94 (43.62%), Query Frame = 0


Query: 13  AAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYVCKLCGGNAVIQWS 72
           A V        N  +F+++Q    +A A  +K    C+ C+G G  +C +CGG    +W 
Sbjct: 70  ACVCASAALISNSYTFVSVQ----SAAALDKKPGGSCRNCQGSGAVLCDMCGGTG--KWK 129

Query: 73  PLSDPIAMNP---CVCPTCEGNRVQRCLNCLGKG 104
            L+   A +      CP C G     C  CLG G
Sbjct: 130 ALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTG 157

The following BLAST results are available for this feature:

BLAST of PI0019891.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0019891.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CNQ8	1.1e-53	95.28	uncharacterized protein LOC111012944 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A1S3C6K9	1.1e-53	96.23	uncharacterized protein LOC103497424 OS=Cucumis melo OX=3656 GN=LOC103497424 PE=...	[more]
A0A0A0LI05	1.2e-52	94.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006050 PE=4 SV=1	[more]
A0A5D3BFD4	2.7e-44	95.65	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6P4BUI7	3.3e-42	75.24	uncharacterized protein LOC107435933 OS=Ziziphus jujuba OX=326968 GN=LOC10743593...	[more]

BLAST of PI0019891.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889623.1	1.3e-53	95.28	uncharacterized protein LOC120079492 [Benincasa hispida]	[more]
XP_008457839.1	2.3e-53	96.23	PREDICTED: uncharacterized protein LOC103497424 [Cucumis melo]	[more]
XP_022142951.1	2.3e-53	95.28	uncharacterized protein LOC111012944 [Momordica charantia]	[more]
XP_004139324.1	2.5e-52	94.34	uncharacterized protein LOC101203873 [Cucumis sativus] >KGN60659.1 hypothetical ...	[more]
KAG7021261.1	9.0e-50	90.57	hypothetical protein SDJN02_17949 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of PI0019891.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20220.1	4.2e-05	40.00	zinc knuckle (CCHC-type) family protein	[more]
AT5G20220.2	4.2e-05	40.00	zinc knuckle (CCHC-type) family protein	[more]
AT2G34860.1	3.6e-04	29.79	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]
AT2G34860.2	3.6e-04	29.79	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15852	PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN	coord: 13..104
None	No IPR available	PANTHER	PTHR15852:SF63	BNAA02G17140D PROTEIN	coord: 13..104
IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily	SUPERFAMILY	57938	DnaJ/Hsp40 cysteine-rich domain	coord: 44..104

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0019891	PI0019891	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0019891.1-exon	PI0019891.1-exon-chr05:1124769..1125104	exon
PI0019891.1-exon	PI0019891.1-exon-chr05:1125471..1125569	exon
PI0019891.1-exon	PI0019891.1-exon-chr05:1126016..1126164	exon
PI0019891.1-exon	PI0019891.1-exon-chr05:1126295..1126487	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0019891.1-three_prime_utr	PI0019891.1-three_prime_utr-chr05:1124769..1125104	three_prime_UTR
PI0019891.1-three_prime_utr	PI0019891.1-three_prime_utr-chr05:1125471..1125523	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0019891.1-cds	PI0019891.1-cds-chr05:1125524..1125569	CDS
PI0019891.1-cds	PI0019891.1-cds-chr05:1126016..1126164	CDS
PI0019891.1-cds	PI0019891.1-cds-chr05:1126295..1126420	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0019891.1-five_prime_utr	PI0019891.1-five_prime_utr-chr05:1126421..1126487	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0019891.1	PI0019891.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane