PI0017010.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0017010.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	LEA_2 domain-containing protein
Location	chr12: 16420463 .. 16421107 (+)
Sequence length	645
RNA-Seq Expression	PI0017010.1
Synteny	PI0017010.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAACTCCACCAACGGCAGATGGGCGCCGCCTCATCCTCAAACCCAATCCCATCCTCATTGCTACAATTCCTCACCCTTCCTCCGAGGCTTCGCCGCCGGCTTGGCCCTTCTAATTTTAATCCCTCTCATCATCTACACTCTCCAATTTTTAATCTTCAACCCCAACCTCCCCGCCCTCCGACTCGACTCACTTCAACATGCTAATTTATCCGCCCCCGCCCCCGCCCCCTCATGGATCGTCGGATTTTCCATCAACAATCCTAACCAGAAGCTCGTCATCTCATTCCAAAACCTCGTGTCCTCCATTTACTACAAACACAATATTATTGCTCAGGCTCGAATTCGTCGCTTCCTCCTCCGCCCAAGGAACTCCACCACCCTCCTCACCCCCTTCATTGCTGACTCGCCTGTCGACGAGTCGGTTCTGAATGACATTAATGGAGACTTGGCGCGTGGAACAATTAATTTCACCGTCGTAGTTCTTGGCTATGCCGACTTCCAGACGTCGGTGTGGCGGTGGAGGGGTATCAATTTTCGGGTTGTTTGCAGTGATTTGTCAGTTGGATTCTCGTCGCCGCCTAGCCTCAGTGGCCGGTCCGGCCAGTTGGTTGGTGGCTCAAGGCAATGCCAGCTACAATGA

mRNA sequence

ATGGCTAACTCCACCAACGGCAGATGGGCGCCGCCTCATCCTCAAACCCAATCCCATCCTCATTGCTACAATTCCTCACCCTTCCTCCGAGGCTTCGCCGCCGGCTTGGCCCTTCTAATTTTAATCCCTCTCATCATCTACACTCTCCAATTTTTAATCTTCAACCCCAACCTCCCCGCCCTCCGACTCGACTCACTTCAACATGCTAATTTATCCGCCCCCGCCCCCGCCCCCTCATGGATCGTCGGATTTTCCATCAACAATCCTAACCAGAAGCTCGTCATCTCATTCCAAAACCTCGTGTCCTCCATTTACTACAAACACAATATTATTGCTCAGGCTCGAATTCGTCGCTTCCTCCTCCGCCCAAGGAACTCCACCACCCTCCTCACCCCCTTCATTGCTGACTCGCCTGTCGACGAGTCGGTTCTGAATGACATTAATGGAGACTTGGCGCGTGGAACAATTAATTTCACCGTCGTAGTTCTTGGCTATGCCGACTTCCAGACGTCGGTGTGGCGGTGGAGGGGTATCAATTTTCGGGTTGTTTGCAGTGATTTGTCAGTTGGATTCTCGTCGCCGCCTAGCCTCAGTGGCCGGTCCGGCCAGTTGGTTGGTGGCTCAAGGCAATGCCAGCTACAATGA

Coding sequence (CDS)

ATGGCTAACTCCACCAACGGCAGATGGGCGCCGCCTCATCCTCAAACCCAATCCCATCCTCATTGCTACAATTCCTCACCCTTCCTCCGAGGCTTCGCCGCCGGCTTGGCCCTTCTAATTTTAATCCCTCTCATCATCTACACTCTCCAATTTTTAATCTTCAACCCCAACCTCCCCGCCCTCCGACTCGACTCACTTCAACATGCTAATTTATCCGCCCCCGCCCCCGCCCCCTCATGGATCGTCGGATTTTCCATCAACAATCCTAACCAGAAGCTCGTCATCTCATTCCAAAACCTCGTGTCCTCCATTTACTACAAACACAATATTATTGCTCAGGCTCGAATTCGTCGCTTCCTCCTCCGCCCAAGGAACTCCACCACCCTCCTCACCCCCTTCATTGCTGACTCGCCTGTCGACGAGTCGGTTCTGAATGACATTAATGGAGACTTGGCGCGTGGAACAATTAATTTCACCGTCGTAGTTCTTGGCTATGCCGACTTCCAGACGTCGGTGTGGCGGTGGAGGGGTATCAATTTTCGGGTTGTTTGCAGTGATTTGTCAGTTGGATTCTCGTCGCCGCCTAGCCTCAGTGGCCGGTCCGGCCAGTTGGTTGGTGGCTCAAGGCAATGCCAGCTACAATGA

Protein sequence

MANSTNGRWAPPHPQTQSHPHCYNSSPFLRGFAAGLALLILIPLIIYTLQFLIFNPNLPALRLDSLQHANLSAPAPAPSWIVGFSINNPNQKLVISFQNLVSSIYYKHNIIAQARIRRFLLRPRNSTTLLTPFIADSPVDESVLNDINGDLARGTINFTVVVLGYADFQTSVWRWRGINFRVVCSDLSVGFSSPPSLSGRSGQLVGGSRQCQLQ

Homology

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BLAST of PI0017010.1 vs. ExPASy TrEMBL
Match: A0A5D3E5N0 (Protein YLS9 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001820 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 7.1e-92
Identity = 174/215 (80.93%), Postives = 192/215 (89.30%), Query Frame = 0


Query: 1   MANSTNGRWAPPHPQTQSHPHCYNSSPFLRGFAAGLALLILIPLIIYTLQFLIFNPNLPA 60
           MAN+TN RW PPHP++QSH HC+NSSPFLRGFAAG+ALL+ I  +IY+LQ+L F+P LPA
Sbjct: 1   MANTTNSRWPPPHPESQSHLHCFNSSPFLRGFAAGMALLLFIAFVIYSLQWLFFHPILPA 60

Query: 61  LRLDSLQHANL-SAPAPAPSWIVGFSINNPNQKLVISFQNLVSSIYYKHNIIAQARIRRF 120
           LRLDSLQ AN  SA A APSWIVGFSINNPN+KL ISFQNL SSIYYK NIIAQARIRRF
Sbjct: 61  LRLDSLQLANFSSAAAAAPSWIVGFSINNPNKKLAISFQNLDSSIYYKDNIIAQARIRRF 120

Query: 121 LLRPRNSTTLLTPFIADSPVDESVLNDINGDLARGTINFTVVVLGYADFQTSVWRWRGIN 180
           LLRPRNSTTL+ PFIA S VDESVLNDINGDLARGTINFTVVVLGYA+FQ S+W+WRG N
Sbjct: 121 LLRPRNSTTLVIPFIAVSLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTN 180

Query: 181 FRVVCSDLSVGFSSPPSLSGRSGQLVGGSRQCQLQ 215
            +VVCSDLSVGFS PPSL+GRSGQLVGGS+QCQLQ
Sbjct: 181 IQVVCSDLSVGFSWPPSLAGRSGQLVGGSKQCQLQ 215

[Close]

BLAST of PI0017010.1 vs. ExPASy TrEMBL
Match: A0A1S3CJS5 (uncharacterized protein LOC103501757 OS=Cucumis melo OX=3656 GN=LOC103501757 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 7.1e-92
Identity = 174/215 (80.93%), Postives = 192/215 (89.30%), Query Frame = 0


Query: 1   MANSTNGRWAPPHPQTQSHPHCYNSSPFLRGFAAGLALLILIPLIIYTLQFLIFNPNLPA 60
           MAN+TN RW PPHP++QSH HC+NSSPFLRGFAAG+ALL+ I  +IY+LQ+L F+P LPA
Sbjct: 1   MANTTNSRWPPPHPESQSHLHCFNSSPFLRGFAAGMALLLFIAFVIYSLQWLFFHPILPA 60

Query: 61  LRLDSLQHANL-SAPAPAPSWIVGFSINNPNQKLVISFQNLVSSIYYKHNIIAQARIRRF 120
           LRLDSLQ AN  SA A APSWIVGFSINNPN+KL ISFQNL SSIYYK NIIAQARIRRF
Sbjct: 61  LRLDSLQLANFSSAAAAAPSWIVGFSINNPNKKLAISFQNLDSSIYYKDNIIAQARIRRF 120

Query: 121 LLRPRNSTTLLTPFIADSPVDESVLNDINGDLARGTINFTVVVLGYADFQTSVWRWRGIN 180
           LLRPRNSTTL+ PFIA S VDESVLNDINGDLARGTINFTVVVLGYA+FQ S+W+WRG N
Sbjct: 121 LLRPRNSTTLVIPFIAVSLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTN 180

Query: 181 FRVVCSDLSVGFSSPPSLSGRSGQLVGGSRQCQLQ 215
            +VVCSDLSVGFS PPSL+GRSGQLVGGS+QCQLQ
Sbjct: 181 IQVVCSDLSVGFSWPPSLAGRSGQLVGGSKQCQLQ 215

[Close]

BLAST of PI0017010.1 vs. ExPASy TrEMBL
Match: A0A0A0LT76 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G169920 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.4e-84
Identity = 162/213 (76.06%), Postives = 179/213 (84.04%), Query Frame = 0


Query: 1   MANSTNGRWAPPHPQTQSHPHCYNSSPFLRGFAAGLALLILIPLIIYTLQFLIFNPNLPA 60
           MANSTNGRW PPHP+TQ+HPHC+N SPF+RGFAAG+ LL+ I  IIY LQ+LIF P L A
Sbjct: 1   MANSTNGRWPPPHPETQTHPHCFNFSPFIRGFAAGITLLLFIVCIIYILQYLIFRPILLA 60

Query: 61  LRLDSLQHANLSAPAPAPSWIVGFSINNPNQKLVISFQNLVSSIYYKHNIIAQARIRRFL 120
           LRLDSLQ  N SA A APSW+VGFSINNPN+KL ISF+NL SSIYYK NIIAQAR RRFL
Sbjct: 61  LRLDSLQFVNFSATAAAPSWVVGFSINNPNKKLAISFRNLESSIYYKDNIIAQARTRRFL 120

Query: 121 LRPRNSTTLLTPFIADSPVDESVLNDINGDLARGTINFTVVVLGYADFQTSVWRWRGINF 180
           L PRNSTTL++PFIAD  VDESVLNDI+GDL RGTI+FTVVVLGYA+ +  VWR  G + 
Sbjct: 121 LPPRNSTTLVSPFIADLLVDESVLNDIHGDLERGTIDFTVVVLGYANVEIGVWRPIGTDI 180

Query: 181 RVVCSDLSVGFSSPPSLSGRSGQLVGGSRQCQL 214
           RVVCSDLSV FS PP LSGRSGQLVGGSRQC L
Sbjct: 181 RVVCSDLSVKFSWPPGLSGRSGQLVGGSRQCHL 213

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BLAST of PI0017010.1 vs. ExPASy TrEMBL
Match: A0A2I4HLK5 (uncharacterized protein At1g08160-like OS=Juglans regia OX=51240 GN=LOC109019244 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 7.0e-31
Identity = 86/218 (39.45%), Postives = 126/218 (57.80%), Query Frame = 0


Query: 11  PPHPQTQSHPHCYNSSP------------FLRGFAAGLALLILIPLIIYTLQFLIFNPNL 70
           PPH   Q+ P+ YN+ P            F+R F A + L+  +  +   + +L+  P L
Sbjct: 32  PPH---QAPPYYYNNQPYPYPYPASSSRNFVRRFLAAMILVFFLVGVAILVLWLVLRPRL 91

Query: 71  PALRLDSLQHANLSAPAPA--PSWIVGFSINNPNQKLVISFQNLVSSIYYKHNIIAQARI 130
           P  R+DSL  +N S+ + +   +W V FS+ NPN+KL IS++ ++SS++YK   I+  R+
Sbjct: 92  PDFRVDSLSLSNFSSASSSLTGNWNVRFSVYNPNKKLSISYEEVLSSLFYKKEFISNTRM 151

Query: 131 RRFLLRPRNSTTLLTPF-IADSPVDESVLNDINGDLARGTINFTVVVLGYADFQTSVWRW 190
             F L  RN T L   F  AD+ VD  V+NDINGD ARGT++F V+V  +  F+   WR 
Sbjct: 152 PPFKLGKRNQTVLDVSFSAADTYVDRWVVNDINGDRARGTVSFNVLVKAWVQFRAGAWRP 211

Query: 191 RGINFRVVCSDLSVGFSSPPSLSGRSGQLVGGSRQCQL 214
           R  + RV+C  L+VG SS    S  SG LVGG+R C++
Sbjct: 212 RNRSIRVLCEGLAVGLSSN---SSGSGMLVGGARDCRV 243

[Close]

BLAST of PI0017010.1 vs. ExPASy TrEMBL
Match: A0A6J1H136 (NDR1/HIN1-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111459189 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 1.8e-26
Identity = 77/213 (36.15%), Postives = 122/213 (57.28%), Query Frame = 0


Query: 10  APPHPQTQSHPHCYNSS------PFLRGFAAGLALLILIPLIIYTLQFLIFNPNLPALRL 69
           APP+     + + Y+S+       FLR   AG+ ++ +I  +I  + +L+  P LP  R+
Sbjct: 35  APPYSYPSHYANPYDSTHHNARISFLRAIIAGIIVIFIITAVILFIIWLVLRPQLPEFRV 94

Query: 70  DSLQHANLSAPAPAPS--WIVGFSINNPNQKLVISFQNLVSSIYYKHNIIAQARIRRFLL 129
           DS Q  N SA + + S  W VGFS+ NPN+K+ IS+  + S+++YK+ I+++ R+  F+ 
Sbjct: 95  DSFQVTNFSAASQSLSAAWFVGFSVFNPNKKMSISYDFVDSTVFYKNQILSETRVPPFIQ 154

Query: 130 RPRNSTTLLTPFIA-DSPVDESVLNDINGDLARGTINFTVVVLGYADFQTSVWRWRGINF 189
             R  T +   F + ++ +D S +N+IN D  RG + F V +     F+   WR R    
Sbjct: 155 DKRTHTVVNASFSSLNAYIDASSVNEINDDRRRGAVKFDVGLSARVGFRAGWWRARRRLL 214

Query: 190 RVVCSDLSVGFSSPPSLSGRSGQLVGGSRQCQL 214
           RV+C DLSVG SS  S S  SG+L+G SR C++
Sbjct: 215 RVLCEDLSVGLSS--SNSSASGKLMGESRSCRV 245

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BLAST of PI0017010.1 vs. NCBI nr
Match: XP_008463664.1 (PREDICTED: uncharacterized protein LOC103501757 [Cucumis melo] >KAA0035579.1 protein YLS9 isoform X2 [Cucumis melo var. makuwa] >TYK30956.1 protein YLS9 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 346.7 bits (888), Expect = 1.5e-91
Identity = 174/215 (80.93%), Postives = 192/215 (89.30%), Query Frame = 0


Query: 1   MANSTNGRWAPPHPQTQSHPHCYNSSPFLRGFAAGLALLILIPLIIYTLQFLIFNPNLPA 60
           MAN+TN RW PPHP++QSH HC+NSSPFLRGFAAG+ALL+ I  +IY+LQ+L F+P LPA
Sbjct: 1   MANTTNSRWPPPHPESQSHLHCFNSSPFLRGFAAGMALLLFIAFVIYSLQWLFFHPILPA 60

Query: 61  LRLDSLQHANL-SAPAPAPSWIVGFSINNPNQKLVISFQNLVSSIYYKHNIIAQARIRRF 120
           LRLDSLQ AN  SA A APSWIVGFSINNPN+KL ISFQNL SSIYYK NIIAQARIRRF
Sbjct: 61  LRLDSLQLANFSSAAAAAPSWIVGFSINNPNKKLAISFQNLDSSIYYKDNIIAQARIRRF 120

Query: 121 LLRPRNSTTLLTPFIADSPVDESVLNDINGDLARGTINFTVVVLGYADFQTSVWRWRGIN 180
           LLRPRNSTTL+ PFIA S VDESVLNDINGDLARGTINFTVVVLGYA+FQ S+W+WRG N
Sbjct: 121 LLRPRNSTTLVIPFIAVSLVDESVLNDINGDLARGTINFTVVVLGYANFQISLWQWRGTN 180

Query: 181 FRVVCSDLSVGFSSPPSLSGRSGQLVGGSRQCQLQ 215
            +VVCSDLSVGFS PPSL+GRSGQLVGGS+QCQLQ
Sbjct: 181 IQVVCSDLSVGFSWPPSLAGRSGQLVGGSKQCQLQ 215

[Close]

BLAST of PI0017010.1 vs. NCBI nr
Match: KGN65002.2 (hypothetical protein Csa_022841 [Cucumis sativus])

HSP 1 Score: 253.1 bits (645), Expect = 2.2e-63
Identity = 135/213 (63.38%), Postives = 149/213 (69.95%), Query Frame = 0


Query: 1   MANSTNGRWAPPHPQTQSHPHCYNSSPFLRGFAAGLALLILIPLIIYTLQFLIFNPNLPA 60
           MANSTNGRW PPHP+TQ+HPHC+N SPF+RGFAAG+ LL+ I  IIY LQ+LIF P L A
Sbjct: 1   MANSTNGRWPPPHPETQTHPHCFNFSPFIRGFAAGITLLLFIVCIIYILQYLIFRPILLA 60

Query: 61  LRLDSLQHANLSAPAPAPSWIVGFSINNPNQKLVISFQNLVSSIYYKHNIIAQARIRRFL 120
           LRLDSLQ  N SA A APSW                                 AR RRFL
Sbjct: 61  LRLDSLQFVNFSATAAAPSW---------------------------------ARTRRFL 120

Query: 121 LRPRNSTTLLTPFIADSPVDESVLNDINGDLARGTINFTVVVLGYADFQTSVWRWRGINF 180
           L PRNSTTL++PFIAD  VDESVLNDI+GDL RGTI+FTVVVLGYA+ +  VWR  G + 
Sbjct: 121 LPPRNSTTLVSPFIADLLVDESVLNDIHGDLERGTIDFTVVVLGYANVEIGVWRPIGTDI 180

Query: 181 RVVCSDLSVGFSSPPSLSGRSGQLVGGSRQCQL 214
           RVVCSDLSV FS PP LSGRSGQLVGGSRQC L
Sbjct: 181 RVVCSDLSVKFSWPPGLSGRSGQLVGGSRQCHL 180

[Close]

BLAST of PI0017010.1 vs. NCBI nr
Match: XP_018857049.1 (uncharacterized protein At1g08160-like [Juglans regia] >KAF5447433.1 hypothetical protein F2P56_032987 [Juglans regia])

HSP 1 Score: 144.1 bits (362), Expect = 1.4e-30
Identity = 86/218 (39.45%), Postives = 126/218 (57.80%), Query Frame = 0


Query: 11  PPHPQTQSHPHCYNSSP------------FLRGFAAGLALLILIPLIIYTLQFLIFNPNL 70
           PPH   Q+ P+ YN+ P            F+R F A + L+  +  +   + +L+  P L
Sbjct: 32  PPH---QAPPYYYNNQPYPYPYPASSSRNFVRRFLAAMILVFFLVGVAILVLWLVLRPRL 91

Query: 71  PALRLDSLQHANLSAPAPA--PSWIVGFSINNPNQKLVISFQNLVSSIYYKHNIIAQARI 130
           P  R+DSL  +N S+ + +   +W V FS+ NPN+KL IS++ ++SS++YK   I+  R+
Sbjct: 92  PDFRVDSLSLSNFSSASSSLTGNWNVRFSVYNPNKKLSISYEEVLSSLFYKKEFISNTRM 151

Query: 131 RRFLLRPRNSTTLLTPF-IADSPVDESVLNDINGDLARGTINFTVVVLGYADFQTSVWRW 190
             F L  RN T L   F  AD+ VD  V+NDINGD ARGT++F V+V  +  F+   WR 
Sbjct: 152 PPFKLGKRNQTVLDVSFSAADTYVDRWVVNDINGDRARGTVSFNVLVKAWVQFRAGAWRP 211

Query: 191 RGINFRVVCSDLSVGFSSPPSLSGRSGQLVGGSRQCQL 214
           R  + RV+C  L+VG SS    S  SG LVGG+R C++
Sbjct: 212 RNRSIRVLCEGLAVGLSSN---SSGSGMLVGGARDCRV 243

[Close]

BLAST of PI0017010.1 vs. NCBI nr
Match: XP_042956465.1 (uncharacterized protein At1g08160 [Carya illinoinensis] >KAG6632036.1 hypothetical protein CIPAW_13G131000 [Carya illinoinensis] >KAG6682257.1 hypothetical protein I3842_13G129700 [Carya illinoinensis] >KAG7950481.1 hypothetical protein I3843_13G114700 [Carya illinoinensis])

HSP 1 Score: 142.5 bits (358), Expect = 4.2e-30
Identity = 84/218 (38.53%), Postives = 125/218 (57.34%), Query Frame = 0


Query: 11  PPHPQTQSHPHCYNSSP------------FLRGFAAGLALLILIPLIIYTLQFLIFNPNL 70
           PPH   Q+HP+ YN+ P            F+R F A +  +  +  +   + +L+  P L
Sbjct: 32  PPH---QAHPYYYNNQPYPYPYPASSSRNFVRRFLAAMIFVFFLIGVAILVIWLVLRPRL 91

Query: 71  PALRLDSLQHANLSAPAPA--PSWIVGFSINNPNQKLVISFQNLVSSIYYKHNIIAQARI 130
           P  R+DSL  +N S+ + +   +W V FS+ NPN+KL IS++ +++S++YK   I+  ++
Sbjct: 92  PEFRVDSLSLSNFSSASSSLTGNWNVRFSVYNPNKKLSISYEEVLASLFYKSEFISNTQM 151

Query: 131 RRFLLRPRNSTTLLTPF-IADSPVDESVLNDINGDLARGTINFTVVVLGYADFQTSVWRW 190
             F LR RN T L   F  AD+ V   V+NDINGD ARGT++F V+V  +  F+   WR 
Sbjct: 152 PPFKLRKRNQTVLDVSFSAADAYVARWVVNDINGDRARGTVSFNVMVKAWVQFRAGAWRP 211

Query: 191 RGINFRVVCSDLSVGFSSPPSLSGRSGQLVGGSRQCQL 214
           R  + RV+C  L+VG SS    S  SG LVGG R C++
Sbjct: 212 RNRSIRVLCEGLAVGLSSN---SSGSGMLVGGERDCRV 243

[Close]

BLAST of PI0017010.1 vs. NCBI nr
Match: KAG2674349.1 (hypothetical protein I3760_13G129800 [Carya illinoinensis])

HSP 1 Score: 142.1 bits (357), Expect = 5.5e-30
Identity = 83/218 (38.07%), Postives = 125/218 (57.34%), Query Frame = 0


Query: 11  PPHPQTQSHPHCYNSSP------------FLRGFAAGLALLILIPLIIYTLQFLIFNPNL 70
           PPH   Q+HP+ YN+ P            F+R F A +  +  +  +   + +L+  P L
Sbjct: 32  PPH---QAHPYYYNNQPYPYPYPASSSRNFVRRFLAAMIFVFFLIGVAILVIWLVLRPRL 91

Query: 71  PALRLDSLQHANLSAPAPA--PSWIVGFSINNPNQKLVISFQNLVSSIYYKHNIIAQARI 130
           P  R+DSL  +N S+ + +   +W V FS+ NPN+KL IS++ +++S++YK   I+  ++
Sbjct: 92  PEFRVDSLSLSNFSSASSSLTGNWNVRFSVYNPNKKLSISYEEVLASLFYKSEFISNTQM 151

Query: 131 RRFLLRPRNSTTLLTPF-IADSPVDESVLNDINGDLARGTINFTVVVLGYADFQTSVWRW 190
             F LR RN T L   F  AD+ V   V+NDINGD ARGT++F V+V  +  F+   WR 
Sbjct: 152 PPFKLRKRNQTVLDVSFSAADAYVARWVVNDINGDRARGTVSFNVMVKAWVQFRAGAWRP 211

Query: 191 RGINFRVVCSDLSVGFSSPPSLSGRSGQLVGGSRQCQL 214
           R  + RV+C  L++G SS    S  SG LVGG R C++
Sbjct: 212 RNRSIRVLCEGLAIGLSSN---SSGSGMLVGGERDCRV 243

[Close]

BLAST of PI0017010.1 vs. TAIR 10
Match: AT3G52460.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 67.0 bits (162), Expect = 2.1e-11
Identity = 49/198 (24.75%), Postives = 92/198 (46.46%), Query Frame = 0


Query: 25  SSPFLRGFAAGLALLILIPLIIYTLQFLIFNPNLPALRLD--SLQHANLSAPAPAPSWIV 84
           SS F+RG   GL +L+++  I  T+ +L+  P +P   ++  S+ + N++ P  +  W  
Sbjct: 102 SSGFVRGIFTGLIVLVVLLCISTTITWLVLRPQIPLFSVNNFSVSNFNVTGPVFSAQWTA 161

Query: 85  GFSINNPNQKLVISFQNLVSSIYYKHNI-----IAQARIRRFLLRPRNSTTL---LTPFI 144
             +I N N KL   F  +   +Y+++ +     +A A  +   +  + S  +   LT   
Sbjct: 162 NLTIENQNTKLKGYFDRIQGLVYHQNAVGEDEFLATAFFQPVFVETKKSVVIGETLTAGD 221

Query: 145 ADSP-VDESVLNDINGDLARGTINFTVVVLGYADFQTSVWRWRGINFRVVCSDLSVGFSS 204
            + P V   V++++  +   GT+ F++ +  +  F+T  W  R    +V C  L VGF  
Sbjct: 222 KEQPKVPSWVVDEMKKERETGTVTFSLRMAVWVTFKTDGWAARESGLKVFCGKLKVGFE- 281

Query: 205 PPSLSGRSGQLVGGSRQC 212
              +SG    L+     C
Sbjct: 282 --GISGNGAVLLPKPLPC 296

[Close]

BLAST of PI0017010.1 vs. TAIR 10
Match: AT2G27260.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 66.2 bits (160), Expect = 3.6e-11
Identity = 48/187 (25.67%), Postives = 97/187 (51.87%), Query Frame = 0


Query: 30  RGFAAGLALLILIPLIIYTLQFLIFNPNLPALRLDSL--QHANLSAPAPAPSWIVGFSIN 89
           R F      L+L+ LI++ + FLI  P LP + L+SL   + N+S    +  W +     
Sbjct: 61  RLFIVFTTFLLLLGLILF-IFFLIVRPQLPDVNLNSLSVSNFNVSNNQVSGKWDLQLQFR 120

Query: 90  NPNQKLVISFQNLVSSIYYKHNIIAQARIRRFLLRPRNSTTL-LTPFIADSPVDESVLND 149
           NPN K+ + ++  + ++YY    +++ R++ F    ++ T +  T  ++ + VD  +++ 
Sbjct: 121 NPNSKMSLHYETALCAMYYNRVSLSETRLQPFDQGKKDQTVVNATLSVSGTYVDGRLVDS 180

Query: 150 INGDLA-RGTINFTVVVLGYADFQTSVWRWRGINFRVVCSDLSVGFSSPPSLSGRSGQLV 209
           I  + + +G + F + ++ Y  F+   +R R     V C D++VG      +S   G++V
Sbjct: 181 IGKERSVKGNVEFDLRMISYVTFRYGAFRRRRY-VTVYCDDVAVGV----PVSSGEGKMV 240

Query: 210 GGSRQCQ 213
           G S++C+
Sbjct: 241 GSSKRCK 241

The following BLAST results are available for this feature:

BLAST of PI0017010.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0017010.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E5N0	7.1e-92	80.93	Protein YLS9 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CJS5	7.1e-92	80.93	uncharacterized protein LOC103501757 OS=Cucumis melo OX=3656 GN=LOC103501757 PE=...	[more]
A0A0A0LT76	1.4e-84	76.06	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G169920 PE=4 ...	[more]
A0A2I4HLK5	7.0e-31	39.45	uncharacterized protein At1g08160-like OS=Juglans regia OX=51240 GN=LOC109019244...	[more]
A0A6J1H136	1.8e-26	36.15	NDR1/HIN1-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111459189 PE=4 SV=1	[more]

BLAST of PI0017010.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463664.1	1.5e-91	80.93	PREDICTED: uncharacterized protein LOC103501757 [Cucumis melo] >KAA0035579.1 pro...	[more]
KGN65002.2	2.2e-63	63.38	hypothetical protein Csa_022841 [Cucumis sativus]	[more]
XP_018857049.1	1.4e-30	39.45	uncharacterized protein At1g08160-like [Juglans regia] >KAF5447433.1 hypothetica...	[more]
XP_042956465.1	4.2e-30	38.53	uncharacterized protein At1g08160 [Carya illinoinensis] >KAG6632036.1 hypothetic...	[more]
KAG2674349.1	5.5e-30	38.07	hypothetical protein I3760_13G129800 [Carya illinoinensis]	[more]

BLAST of PI0017010.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52460.1	2.1e-11	24.75	hydroxyproline-rich glycoprotein family protein	[more]
AT2G27260.1	3.6e-11	25.67	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..214
None	No IPR available	PANTHER	PTHR31852:SF2	GRPE-LIKE PROTEIN	coord: 11..212
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 11..212

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0017010	PI0017010	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0017010.1-exon	PI0017010.1-exon-chr12:16420463..16421107	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0017010.1-cds	PI0017010.1-cds-chr12:16420463..16421107	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0017010.1	PI0017010.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane