PI0014821.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0014821.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr01: 4278457 .. 4283439 (-)
Sequence length	2198
RNA-Seq Expression	PI0014821.1
Synteny	PI0014821.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTACTCCCATCCCCATTTCACCTTCCATCAATTTCCCTCTCGTAGCAATTTCTTCATAATTTCTTGGCTCAATATTCTCATGGGGGCGTTTCAATTTCAATCTCGTCTTCAAGTTTCGAAGATTTTGCCTTCAATAATTAGGAAATGGGAAATAGATTTTCCTCTCCTCCACAATCCATTGCGAACGCCGGATTTCTCACTCTCGCCGGCGCAATCTCGTCGTTTTGCCTCCAATTCCATGGATGACGATTGGGACCTCTCGGAGTCCGAGCGGAGAAACACCTCGCCGCAACGTCGTTCTCCTCTAGATCATCGTGAAGCTCGTCGTGTTCCCAGAGGGGAAGTATCTGCTTCTTACCCTGACGATAATCGACATCAACGCTTTAATAGGCATTCAGAAGGTTCCTCTTCTCGATTCACTAAGGAAGGGTCGACTTCGCGGCAAAGGAGTGAGCCTTTATCTCAGAAGGATTTTAGCTTTCTTGAAAAATTCAAGCTGAATACTGATAATCAGAGTAGTGACAAAGAGAAGACTGAGGAGAACTCTTCTTCTGCTCCGGTTTCTGAATCAATGCAGGAGAAGCAGCAGTCGCAACCCCAGCGTCCTCCAGAAGCTGATGAGATATTCAGGAAAATGAAGGAGACTGGTTTAATTCCCAATGCTGTTGCTATGCTTGATGGGCTTTGTAAAGATGGACGTATACAAGAAGCAATGAAGCTTTTTGGTTTGATTCGTGAGAAAGGTACAATTCCAGAAGTTGTGATTTACACTGCTGTTGTTGATGGGTTTTGCAAGGCGGAGAAGACTGATGAAGCAATTAGGATTTTCAGAAAAATGCAGAATAATGGTATTCCACCAAATGCCTTCAGTTTTGGTGTCTTGATACAGGGATTGTACAAATGCAAAAAATTAGATGATGCTGTAGCATTTTGCAATGAGATGTTCGAATCTGGGTATTCACCAAATTATACCACTTTTGTTGGCCTAATTGATGTGTTATGCAATGAGAAGGGTGTAGATGAAGCTCATAGTGTCGTAGAAACCTTTAAACAAAAGGGATTCTTGATTGATGAGAAAGCTTTAAGGGAATTTTTGAATAAAAGAGCCTCATTTTCACCACATATCTGGAAAGTGTTCTTTGGTGATAAAAGAGCCCCATTTTTCTGAGATTGTTGTCGTAGTGTTGTAAGTCTTCTCTCTTTTCCCTTTTATGTAATTTCTTAGATAATTCAAGTTATGTTTACTATAGATTATATGGAGTAATTTGAGTAGTTGACCAATATGTTTGGAACGAAAACTGCCTTCAATCTTTTGATAGCTTCTATAAGTTTTTACGAATTGTTGGGTACAAAAATTATAAGATACGAAACAAGGAAGAGGAGAATAGCCCATTTGTTACCTTGGTATTTACAATCTTTACAACTTATCATATACTATTTAGTTTCATCAGTATCTTTTTTTGTTAATATTTTCATTAGCATTCTGGGATGGTTATGATTTATAAAAGAGGAAAAACAACCTTTCATTAAGAAAAAAAATGAAGAAATACACGGACATCCAAAAAAACCATGCACACAAAAAGGAGTGCCACTAGAGAAACAGTGTCTAGTTGTAAAATGATCTCTAACAAATAATTACACACAACCTCCATCCCTGAAGCCTAAAAAAAATTTAGGTTTTAACTACTACTTATGCTTATGTATTTTTTTTAATGAGAAACACAACTATTGTGAAAGAAAGAAAGAATACATGGGTAAAAAAACCAAGCCTACAAAAAGAAGGAATCTCTCTATAAGAAGAGACTCCAACTATACAAAATTATGTTCATAGGATAATAACAAACGATCTTCGATATTGAAGGCCAACGGAGACATGAAAGCGAACAAGAGAACATAAGCCTTCGCTCCCCTTCTCAACACCCCTAAACACCCTATTATTTCTCTTGTCCCAAAGCACCACAGAATAGCACAAATGCTGGCACATCAGAGAAAGCGGCCTTTCTTCCTAAACGGCAGATTGAAGAGGAACTCCTCGATCATATCTTTAACAACTCTGTGACGAACACTGCTCAAGCCAAAAGTCTGGAAGAAAGAGTCTCAAACACTCGTTCTCTTTGTTATCTTCACTCAGGAGTATCGTTACCTAAGCTTATTTTGATTTCTTCCCATCAAGCTTACTGCACAAGTTTACAAGTTTTAGAATCACTCAACATAAAGCTAGCCCAACTGATAACCTATCATACGATAAGTGCACACTTTAAGTTAAGTTAAAAGCCTTCAAAATCTTACTTAGCATAAACATACAAGAACATACAAGAAGTCACATAAGCATAAACATACAAGAACTTAGGTGTAAATCTTGCTTAGCGTAGCTGTTTCCCTCTCCCTCTCTTTCTGCTCCTTCCTCATCTTCTTCTTCTTATCAACACCAGCTGGAAGTGCAAAAGTTTACATGGATAAATACCACTTTGAGCTTAACCAGTTGAAAAGGTTCAACTTGCCTTTAAAAATGATACACAATTTCTTGTCTGCATCAGCATGTTCATCACTGTTGTCACAAACTAAGCATTATGTGTGCATTTCTTACTACATCATTAATTACATTCAATCCTGACAATATTTAATATCAGACTCATGGGACAACCGTAGGAAATTAATTCCTGTGTAAATGTTCACCATGGATTGAACCCATGACCTCTTAGTTAGTTATTGAGACTTCTTTTTTACCACTAAGCCAATCCATGAAGGTTTAATCCTGACAATGTTTTAAAAAGCTAAAGGCAGCCTTGAGGGTTTTCCTCTTGAAGAGAATGAATTAAAAATGTTTTATAAAACCTAAACTGGCTAAACATGATGCGTGTATAAAAGTGTGAAAAAAGAAACTTTTCCACAGTTTTCACTTAATAAAAAATTCTAAACGGTCATCTTTATCATCATTACTGCAACTATTATCAATAATAGGATTGATTTATGTTATATATGTTTGCTTTCAACATTCTTCAGTTCGCGATAGTAGAATTAATCCTAGTTCCAATTGTCACAACTCAAACCATAATATTCTTTAAGAATTAGGCAAATCACCATTATTTTTCTAATCACTAGGTGAGGACCGTGAGGTATAGAGATTTTAAGCCTTGATGCATTTTCACAAAGGCGCAAGCCTCGTTTGTGGGAGGCGTAAGCCTCTTATGGCTCTTATGGTTCAACAAAGGCGAAAATCTTGAGTCTAAAACTTAGAGCCTTGCCTTGAGGGGGGCCTCAAGGTGTAAGCCTCAATAAACATGGAATCCAAAAGTACCGATTGTGAAGATTTAGACTTGGATGCTCTGTGAGGGTTCGCAACTCAATTTTTAGGCTTCCTAAATATTTGCAAGGCAAAGTTGCATCTTATGGGAGAATCGTTTCACTAGTAAATGGAACTCAACTTGAGACTTGTTGGTCATTACATTTTGGAATTTGATGAGTGGAAGTTCATACTCAATATTGTGTGCAGATTATTGGGCTATTATTAGAAAAATACTTAAATGCATTCCGGTTTACACTCATCTTCATGCATCTTCCAAATTGGTCAATCATAATTTGCCACATGAAAAATTCTTCTTATATCTTTCTCTAAATATTTTAATTCATTTTTGTGTGTAATGAGAGTGGGATGCATAGGATAGAATGCACCTAAGCATGCTTTTATAATTATTATTAAGATGATGTTGGGATGCTCGAGTGCGCCACCTGATCCTTAGATTCTAGTTTCTTTTTCGCTCTTGTATAATTCTCTTGCTCTTAGAGCTCTTGTATCTCTCTTTTTTTTTACTATTATTAATAAAGAGATCTGTTTCCTCGATATGATATTAAGATGATGTTGGGTCAATAGGAGTTTTCATTTATAAGGCGGTATAATTTATATTCTTGTTAGTTATGGCTAAGGTTATGCAGCTCCCTAAGTGTTGACGCTTATCTGTTTGATTATGTAGGTGAAGAGACCAATCATATTACTAAGAAGAAACCACAAGTTGAAATCATTGTAACTCAGTAGTCAGAATTTAATTATCGTGTTGAAGAATGAAAATCTGGTTGAAGAGTGAACAATCTACAACTGTTGAAGTGAGAGCTCTAAACCGTAGATCAAGTTTGGGGAACACAAAATTTGTGTAGTCAAGTTCATTGACCTTTCGTGAAAGAATGGAGACATTAGCTGCAGTTAATAACTGATGGATATTTTTTGCAAGAATGAACATCAGAAAATCTGTTAAATTCACCATTTACCTCTTAGATTTTTTTTTAAACAACAATCATGTAAGTTATGACTATGTCATTGCTTCCTAGTTGCTACCACTAATGGCTATACAGAGTTTCTTTTTGTCTCTCACTCTCTGTGCATTGTATTAACTTCCCTTATTTGATTGTAAAGAGTTGTATGTGAGTGAATAGAAAGTGTTTAAGGTACTAATCAACTCAAAAGCTTAACCTGATAGGTTGATTGGTGATTTAACATAGCATAAGGATGGAATGTCTTGTATTCAAACTTTTGTAACGTAACTTCGAACATTGATTTTTACTTGTAGGTATTCCACAAATTTTCAAGCCTACAAGTAAGGAGAATCCTACAAGTAAGGAGAATGTTAAATATTGGTATATTCAAATTTACCATTAACTCTTTTGGTTTAAAGCTTTTGATTGGTAATTTAATAAGAAACATGACGGAAGTATCCATGATTGTTGATTCTCTATGTTGAGTTCTGTTCATGGCTGTACTCTACTCCTTGTTATATTATATTTAATTTAGGTGTGGAGAGTGAAGAATATGGAAGAGACACACCATCTGGCTTAAGAGAGGAGAATGAGAAAGAAATCCCACGTTGCAAGGTACCCATTTATTTTAAAGCTAAGGCACAACTCATCAGATATATATTGTATTTTGTTTAGAGGAGTATGGATGATTTGGTCGGTATTATTCTATCTTAAACTGCAAGTTTAGTCAAAAC

mRNA sequence

CCTACTCCCATCCCCATTTCACCTTCCATCAATTTCCCTCTCGTAGCAATTTCTTCATAATTTCTTGGCTCAATATTCTCATGGGGGCGTTTCAATTTCAATCTCGTCTTCAAGTTTCGAAGATTTTGCCTTCAATAATTAGGAAATGGGAAATAGATTTTCCTCTCCTCCACAATCCATTGCGAACGCCGGATTTCTCACTCTCGCCGGCGCAATCTCGTCGTTTTGCCTCCAATTCCATGGATGACGATTGGGACCTCTCGGAGTCCGAGCGGAGAAACACCTCGCCGCAACGTCGTTCTCCTCTAGATCATCGTGAAGCTCGTCGTGTTCCCAGAGGGGAAGTATCTGCTTCTTACCCTGACGATAATCGACATCAACGCTTTAATAGGCATTCAGAAGGTTCCTCTTCTCGATTCACTAAGGAAGGGTCGACTTCGCGGCAAAGGAGTGAGCCTTTATCTCAGAAGGATTTTAGCTTTCTTGAAAAATTCAAGCTGAATACTGATAATCAGAGTAGTGACAAAGAGAAGACTGAGGAGAACTCTTCTTCTGCTCCGGTTTCTGAATCAATGCAGGAGAAGCAGCAGTCGCAACCCCAGCGTCCTCCAGAAGCTGATGAGATATTCAGGAAAATGAAGGAGACTGGTTTAATTCCCAATGCTGTTGCTATGCTTGATGGGCTTTGTAAAGATGGACGTATACAAGAAGCAATGAAGCTTTTTGGTTTGATTCGTGAGAAAGGTACAATTCCAGAAGTTGTGATTTACACTGCTGTTGTTGATGGGTTTTGCAAGGCGGAGAAGACTGATGAAGCAATTAGGATTTTCAGAAAAATGCAGAATAATGGTATTCCACCAAATGCCTTCAGTTTTGGTGTCTTGATACAGGGATTGTACAAATGCAAAAAATTAGATGATGCTGTAGCATTTTGCAATGAGATGTTCGAATCTGGGTATTCACCAAATTATACCACTTTTGTTGGCCTAATTGATGTGTTATGCAATGAGAAGGGTGTAGATGAAGCTCATAGTGTCGTAGAAACCTTTAAACAAAAGGGATTCTTGATTGATGAGAAAGCTTTAAGGGAATTTTTGAATAAAAGAGCCTCATTTTCACCACATATCTGGAAAGTGTTCTTTGGTGATAAAAGAGCCCCATTTTTCTGAGATTGTTGTCGTAGTGTTGTGAAGAGACCAATCATATTACTAAGAAGAAACCACAAGTTGAAATCATTGTAACTCAGTAGTCAGAATTTAATTATCGTGTTGAAGAATGAAAATCTGGTTGAAGAGTGAACAATCTACAACTGTTGAAGTGAGAGCTCTAAACCGTAGATCAAGTTTGGGGAACACAAAATTTGTGTAGTCAAGTTCATTGACCTTTCGTGAAAGAATGGAGACATTAGCTGCAGTTAATAACTGATGGATATTTTTTGCAAGAATGAACATCAGAAAATCTGTTAAATTCACCATTTACCTCTTAGATTTTTTTTTAAACAACAATCATGTAAGTTATGACTATGTCATTGCTTCCTAGTTGCTACCACTAATGGCTATACAGAGTTTCTTTTTGTCTCTCACTCTCTGTGCATTGTATTAACTTCCCTTATTTGATTGTAAAGAGTTGTATGTGAGTGAATAGAAAGTGTTTAAGGTACTAATCAACTCAAAAGCTTAACCTGATAGGTTGATTGGTGATTTAACATAGCATAAGGATGGAATGTCTTGTATTCAAACTTTTGTAACGTAACTTCGAACATTGATTTTTACTTGTAGGTATTCCACAAATTTTCAAGCCTACAAGTAAGGAGAATCCTACAAGTAAGGAGAATGTTAAATATTGGTATATTCAAATTTACCATTAACTCTTTTGGTTTAAAGCTTTTGATTGGTAATTTAATAAGAAACATGACGGAAGTATCCATGATTGTTGATTCTCTATGTTGAGTTCTGTTCATGGCTGTACTCTACTCCTTGTTATATTATATTTAATTTAGGTGTGGAGAGTGAAGAATATGGAAGAGACACACCATCTGGCTTAAGAGAGGAGAATGAGAAAGAAATCCCACGTTGCAAGGTACCCATTTATTTTAAAGCTAAGGCACAACTCATCAGATATATATTGTATTTTGTTTAGAGGAGTATGGATGATTTGGTCGGTATTATTCTATCTTAAACTGCAAGTTTAGTCAAAAC

Coding sequence (CDS)

ATGGGGGCGTTTCAATTTCAATCTCGTCTTCAAGTTTCGAAGATTTTGCCTTCAATAATTAGGAAATGGGAAATAGATTTTCCTCTCCTCCACAATCCATTGCGAACGCCGGATTTCTCACTCTCGCCGGCGCAATCTCGTCGTTTTGCCTCCAATTCCATGGATGACGATTGGGACCTCTCGGAGTCCGAGCGGAGAAACACCTCGCCGCAACGTCGTTCTCCTCTAGATCATCGTGAAGCTCGTCGTGTTCCCAGAGGGGAAGTATCTGCTTCTTACCCTGACGATAATCGACATCAACGCTTTAATAGGCATTCAGAAGGTTCCTCTTCTCGATTCACTAAGGAAGGGTCGACTTCGCGGCAAAGGAGTGAGCCTTTATCTCAGAAGGATTTTAGCTTTCTTGAAAAATTCAAGCTGAATACTGATAATCAGAGTAGTGACAAAGAGAAGACTGAGGAGAACTCTTCTTCTGCTCCGGTTTCTGAATCAATGCAGGAGAAGCAGCAGTCGCAACCCCAGCGTCCTCCAGAAGCTGATGAGATATTCAGGAAAATGAAGGAGACTGGTTTAATTCCCAATGCTGTTGCTATGCTTGATGGGCTTTGTAAAGATGGACGTATACAAGAAGCAATGAAGCTTTTTGGTTTGATTCGTGAGAAAGGTACAATTCCAGAAGTTGTGATTTACACTGCTGTTGTTGATGGGTTTTGCAAGGCGGAGAAGACTGATGAAGCAATTAGGATTTTCAGAAAAATGCAGAATAATGGTATTCCACCAAATGCCTTCAGTTTTGGTGTCTTGATACAGGGATTGTACAAATGCAAAAAATTAGATGATGCTGTAGCATTTTGCAATGAGATGTTCGAATCTGGGTATTCACCAAATTATACCACTTTTGTTGGCCTAATTGATGTGTTATGCAATGAGAAGGGTGTAGATGAAGCTCATAGTGTCGTAGAAACCTTTAAACAAAAGGGATTCTTGATTGATGAGAAAGCTTTAAGGGAATTTTTGAATAAAAGAGCCTCATTTTCACCACATATCTGGAAAGTGTTCTTTGGTGATAAAAGAGCCCCATTTTTCTGA

Protein sequence

MGAFQFQSRLQVSKILPSIIRKWEIDFPLLHNPLRTPDFSLSPAQSRRFASNSMDDDWDLSESERRNTSPQRRSPLDHREARRVPRGEVSASYPDDNRHQRFNRHSEGSSSRFTKEGSTSRQRSEPLSQKDFSFLEKFKLNTDNQSSDKEKTEENSSSAPVSESMQEKQQSQPQRPPEADEIFRKMKETGLIPNAVAMLDGLCKDGRIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKTDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMFESGYSPNYTTFVGLIDVLCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNKRASFSPHIWKVFFGDKRAPFF

Homology

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BLAST of PI0014821.1 vs. ExPASy Swiss-Prot
Match: Q9SZL5 (Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana OX=3702 GN=At4g38150 PE=2 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 3.3e-70
Identity = 145/265 (54.72%), Postives = 177/265 (66.79%), Query Frame = 0


Query: 94  PDDNRHQRFNRHSEGSSSRFTKEGSTSRQRSEPLSQKDFSFLEKFKLNTDNQSSDKEKTE 153
           P  NR  R  R S        ++     +    LS  D  FLE+FKL  +  S +  K E
Sbjct: 48  PLPNRPLRGERSSNSHREPPARQAHNLGKSDTTLS--DDGFLEQFKLGVNQDSRETPKPE 107

Query: 154 ENSSSAPVSESMQEKQQSQPQRPPE-ADEIFRKMKETGLIPNAVAMLDGLCKDGRIQEAM 213
           +                 +P  PPE +DEIF+KMKE GLIPNAVAMLDGLCKDG +QEAM
Sbjct: 108 Q--------------YPQEPLPPPEDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAM 167

Query: 214 KLFGLIREKGTIPEVVIYTAVVDGFCKAEKTDEAIRIFRKMQNNGIPPNAFSFGVLIQGL 273
           KLFGL+R+KGTIPEVVIYTAVV+ FCKA K ++A RIFRKMQNNGI PNAFS+GVL+QGL
Sbjct: 168 KLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGL 227

Query: 274 YKCKKLDDAVAFCNEMFESGYSPNYTTFVGLIDVLCNEKGVDEAHSVVETFKQKGFLIDE 333
           Y C  LDDAVAFC+EM ESG+SPN  TFV L+D LC  KGV++A S ++T  QKGF ++ 
Sbjct: 228 YNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNV 287

Query: 334 KALREFLNKRASFSPHIWKVFFGDK 358
           KA++EF++KRA F    W+  F  K
Sbjct: 288 KAVKEFMDKRAPFPSLAWEAIFKKK 296

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BLAST of PI0014821.1 vs. ExPASy Swiss-Prot
Match: Q9M9X9 (Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g06710 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.5e-22
Identity = 51/154 (33.12%), Postives = 84/154 (54.55%), Query Frame = 0


Query: 177 PEADEIFRKMKETGLIPNAV---AMLDGLCKDGRIQEAMKLFGLIREKGTIPEVVIYTAV 236
           P+ D  F++  +    PN V   A+LDG CK  R++EA KL   +  +G  P  ++Y A+
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680

Query: 237 VDGFCKAEKTDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMFESGY 296
           +DG CK  K DEA  +  +M  +G P   +++  LI   +K K+ D A    ++M E+  
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740

Query: 297 SPNYTTFVGLIDVLCNEKGVDEAHSVVETFKQKG 328
           +PN   +  +ID LC     DEA+ +++  ++KG
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774

[Close]

BLAST of PI0014821.1 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.3e-22
Identity = 53/146 (36.30%), Postives = 83/146 (56.85%), Query Frame = 0


Query: 178 EADEIFRKMKETGLIPNAV---AMLDGLCKDGRIQEAMKLFGLIREKGTIPEVVIYTAVV 237
           EA+E F +M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393

Query: 238 DGFCKAEKTDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMFESGYS 297
            GFC+     EA ++F +M   G+ P++ +F  LI G  K   + DA    N M ++G S
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453

Query: 298 PNYTTFVGLIDVLCNEKGVDEAHSVV 321
           PN  T+  LID LC E  +D A+ ++
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELL 479

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BLAST of PI0014821.1 vs. ExPASy Swiss-Prot
Match: Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 5.7e-22
Identity = 55/152 (36.18%), Postives = 81/152 (53.29%), Query Frame = 0


Query: 179 ADEIFRKMKETGLIPNAV---AMLDGLCKDGRIQEAMKLFGLIREKGTIPEVVIYTAVVD 238
           A E+ RKM+E  +  +AV    ++DGLCKDG +  A  LF  +  KG   +++ Y  ++ 
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306

Query: 239 GFCKAEKTDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMFESGYSP 298
           GFC A + D+  ++ R M    I PN  +F VLI    K  KL +A     EM + G +P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366

Query: 299 NYTTFVGLIDVLCNEKGVDEAHSVVETFKQKG 328
           N  T+  LID  C E  ++EA  +V+    KG
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398

[Close]

BLAST of PI0014821.1 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.6e-21
Identity = 51/157 (32.48%), Postives = 89/157 (56.69%), Query Frame = 0


Query: 178 EADEIFRKMKETGLIPNAV---AMLDGLCKDGRIQEAMKLFGLIREKGTIPEVVIYTAVV 237
           EA  + R+M + G  P+ V   A+++G C  G++++A+ +   ++EKG  P+VV Y+ V+
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457

Query: 238 DGFCKAEKTDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMFESGYS 297
            GFC++   DEA+R+ R+M   GI P+  ++  LIQG  + ++  +A     EM   G  
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517

Query: 298 PNYTTFVGLIDVLCNEKGVDEAHSVVETFKQKGFLID 332
           P+  T+  LI+  C E  +++A  +     +KG L D
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554

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BLAST of PI0014821.1 vs. ExPASy TrEMBL
Match: A0A0A0K6C0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029950 PE=4 SV=1)

HSP 1 Score: 615.5 bits (1586), Expect = 1.4e-172
Identity = 322/362 (88.95%), Postives = 331/362 (91.44%), Query Frame = 0


Query: 1   MGAFQFQSRLQVSKILPSIIRKWEIDFPLLHNPLRTPDFSLSPAQSRRFASNSMDDDWDL 60
           MGAFQ QSRLQVSKIL S IRKWEIDFPLLHNPLRTPDFSL PAQSRRFASNSMDDD   
Sbjct: 1   MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAF 60

Query: 61  SESERRNTSPQRRSPLDHREARRVPRGEVSASYPDDNRHQRFNRHSEGSSSRFTKEGSTS 120
           S+SE  NT PQRR P DHREARRVPRG V+ASY  DNR+QRFNRHSEGSSSRFT EGSTS
Sbjct: 61  SDSEPINTPPQRRFPPDHREARRVPRGGVTASY--DNRNQRFNRHSEGSSSRFTNEGSTS 120

Query: 121 RQRSEPLSQKDFSFLEKFKLNTDNQSSDKEKTEENSSSAPVSESMQEKQQSQPQRPPEAD 180
            QRSE LSQKDFSFLEKFKLNTDNQSS KEKTEENSSSAPVSESM EKQQS+PQRPPEAD
Sbjct: 121 PQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEAD 180

Query: 181 EIFRKMKETGLIPNAVAMLDGLCKDGRIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKA 240
           EIF KMKETGLIPNAVAMLDGLCKDG IQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKA
Sbjct: 181 EIFGKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKA 240

Query: 241 EKTDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMFESGYSPNYTTF 300
           EK DEAIRIFRKMQ+NGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEM ESG+ PN TTF
Sbjct: 241 EKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTF 300

Query: 301 VGLIDVLCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNKRASFSPHIWKVFFGDKRAP 360
           VGLID LCNEKGVDEAHSVVETFKQKGFLIDEKALRE LNKRA FSP IWKVFFG+++ P
Sbjct: 301 VGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPP 360

Query: 361 FF 363
           FF
Sbjct: 361 FF 360

[Close]

BLAST of PI0014821.1 vs. ExPASy TrEMBL
Match: A0A1S3CFW0 (pentatricopeptide repeat-containing protein At4g38150 OS=Cucumis melo OX=3656 GN=LOC103500481 PE=4 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 4.0e-172
Identity = 322/362 (88.95%), Postives = 331/362 (91.44%), Query Frame = 0


Query: 1   MGAFQFQSRLQVSKILPSIIRKWEIDFPLLHNPLRTPDFSLSPAQSRRFASNSMDDDWDL 60
           M AFQFQSRLQVSKIL S IRKWEIDFPLLHNPLRTPDFSLSPA SRRF+SNSMDDD   
Sbjct: 1   MAAFQFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAF 60

Query: 61  SESERRNTSPQRRSPLDHREARRVPRGEVSASYPDDNRHQRFNRHSEGSSSRFTKEGSTS 120
           SESE RNT PQRR P DHREARRVPRG V+ SY  DNR+QRFNRHSEGSSSRFT EGSTS
Sbjct: 61  SESEPRNTPPQRRFPPDHREARRVPRGGVTDSY--DNRNQRFNRHSEGSSSRFTNEGSTS 120

Query: 121 RQRSEPLSQKDFSFLEKFKLNTDNQSSDKEKTEENSSSAPVSESMQEKQQSQPQRPPEAD 180
           RQRSE LSQKDFSFLEKFKLNTDNQSS  EKTEENSSSAPVSESMQEKQQSQ QRPP AD
Sbjct: 121 RQRSESLSQKDFSFLEKFKLNTDNQSSGNEKTEENSSSAPVSESMQEKQQSQHQRPPAAD 180

Query: 181 EIFRKMKETGLIPNAVAMLDGLCKDGRIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKA 240
           EIFRKMKE+GLIPNAVAMLDGLCKDG IQEAMKLF LIREKGTIPEVVIYTAVVDGFCKA
Sbjct: 181 EIFRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYTAVVDGFCKA 240

Query: 241 EKTDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMFESGYSPNYTTF 300
           EK DEAIRIFRKMQN GI PNAFSFGVLIQGLYKCKKLDDAVAFCNEM ESG+ PN TTF
Sbjct: 241 EKFDEAIRIFRKMQNKGISPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTF 300

Query: 301 VGLIDVLCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNKRASFSPHIWKVFFGDKRAP 360
           VGLIDVLC+EKGVDEAH+VVETFKQKGFLIDEKALREFLNKRA FSP IWKVFFG+K+AP
Sbjct: 301 VGLIDVLCSEKGVDEAHNVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNKKAP 360

Query: 361 FF 363
           FF
Sbjct: 361 FF 360

[Close]

BLAST of PI0014821.1 vs. ExPASy TrEMBL
Match: A0A5D3D5J5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00030 PE=4 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 4.0e-172
Identity = 322/362 (88.95%), Postives = 331/362 (91.44%), Query Frame = 0


Query: 1   MGAFQFQSRLQVSKILPSIIRKWEIDFPLLHNPLRTPDFSLSPAQSRRFASNSMDDDWDL 60
           M AFQFQSRLQVSKIL S IRKWEIDFPLLHNPLRTPDFSLSPA SRRF+SNSMDDD   
Sbjct: 1   MAAFQFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAF 60

Query: 61  SESERRNTSPQRRSPLDHREARRVPRGEVSASYPDDNRHQRFNRHSEGSSSRFTKEGSTS 120
           SESE RNT PQRR P DHREARRVPRG V+ SY  DNR+QRFNRHSEGSSSRFT EGSTS
Sbjct: 61  SESEPRNTPPQRRFPPDHREARRVPRGGVTDSY--DNRNQRFNRHSEGSSSRFTNEGSTS 120

Query: 121 RQRSEPLSQKDFSFLEKFKLNTDNQSSDKEKTEENSSSAPVSESMQEKQQSQPQRPPEAD 180
           RQRSE LSQKDFSFLEKFKLNTDNQSS  EKTEENSSSAPVSESMQEKQQSQ QRPP AD
Sbjct: 121 RQRSESLSQKDFSFLEKFKLNTDNQSSGNEKTEENSSSAPVSESMQEKQQSQHQRPPAAD 180

Query: 181 EIFRKMKETGLIPNAVAMLDGLCKDGRIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKA 240
           EIFRKMKE+GLIPNAVAMLDGLCKDG IQEAMKLF LIREKGTIPEVVIYTAVVDGFCKA
Sbjct: 181 EIFRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYTAVVDGFCKA 240

Query: 241 EKTDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMFESGYSPNYTTF 300
           EK DEAIRIFRKMQN GI PNAFSFGVLIQGLYKCKKLDDAVAFCNEM ESG+ PN TTF
Sbjct: 241 EKFDEAIRIFRKMQNKGISPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTF 300

Query: 301 VGLIDVLCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNKRASFSPHIWKVFFGDKRAP 360
           VGLIDVLC+EKGVDEAH+VVETFKQKGFLIDEKALREFLNKRA FSP IWKVFFG+K+AP
Sbjct: 301 VGLIDVLCSEKGVDEAHNVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNKKAP 360

Query: 361 FF 363
           FF
Sbjct: 361 FF 360

[Close]

BLAST of PI0014821.1 vs. ExPASy TrEMBL
Match: A0A6J1I1Q2 (pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita maxima OX=3661 GN=LOC111468227 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 8.7e-151
Identity = 290/366 (79.23%), Postives = 312/366 (85.25%), Query Frame = 0


Query: 1   MGA--FQFQSRLQVSKILPSIIRKWEIDFPLLHNPLRTPDFSLSPAQSRRFASNSMDDDW 60
           MGA   Q QSRL+VSKIL S IR WE  FPLLH+PLRTPD SLSP +SR F+SNSMDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  DLSESERRNTSPQRRSPLDHREARRVPR--GEVSASYPDDNRHQRFNRHSEGSSSRFTKE 120
           + S SE R++ PQRRSP D REARRVP+  GEVSA YP+DNR+QRFNRH EGS SRF  E
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANE 120

Query: 121 GSTSRQRSEPLSQKDFSFLEKFKLNTDNQSSDKEKTEENSSSAPVSESMQEKQQSQPQRP 180
           G  SR+RSE LSQKDFSFLEKFKLNTDN S+  EKTE  SSSA  SESMQ K QSQPQ P
Sbjct: 121 GPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEP-SSSAQFSESMQGK-QSQPQCP 180

Query: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGRIQEAMKLFGLIREKGTIPEVVIYTAVVDG 240
           PEADEIFRKMKETGLIPNAVAMLDGLCKDG IQEAMKLFGLIREKGTIPEVV+YTAVVDG
Sbjct: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDG 240

Query: 241 FCKAEKTDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMFESGYSPN 300
           FCKAE  DEAIRIFRKMQNNGI PNAFS+GVLIQGLYKCKKL+DAV+FC EM ESG+SPN
Sbjct: 241 FCKAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPN 300

Query: 301 YTTFVGLIDVLCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNKRASFSPHIWKVFFGD 360
            TTFVGLID LC EKGVDEAH+V+ET KQKGFLI+EKALREFLNKRA FSPHIW++ FG 
Sbjct: 301 LTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGK 360

Query: 361 KRAPFF 363
           K   FF
Sbjct: 361 KTKEFF 364

[Close]

BLAST of PI0014821.1 vs. ExPASy TrEMBL
Match: A0A6J1GKZ0 (pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita moschata OX=3662 GN=LOC111455321 PE=4 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 7.4e-150
Identity = 286/366 (78.14%), Postives = 313/366 (85.52%), Query Frame = 0


Query: 1   MGA--FQFQSRLQVSKILPSIIRKWEIDFPLLHNPLRTPDFSLSPAQSRRFASNSMDDDW 60
           MGA   Q QSRL+VSKIL S IR WE  FPLLH+PLRTPD SLSP +SR F+SNSMDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  DLSESERRNTSPQRRSPLDHREARRVPR--GEVSASYPDDNRHQRFNRHSEGSSSRFTKE 120
           + S SE R++ PQRRSP D REARRVP+  GEVSA YP+DNR+QRFNRHSEGSSSRF  +
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHSEGSSSRFAND 120

Query: 121 GSTSRQRSEPLSQKDFSFLEKFKLNTDNQSSDKEKTEENSSSAPVSESMQEKQQSQPQRP 180
           G  SR R+E LSQKDFSFLEKFKLNTDNQS+  EK E  SSSA +SESMQ K QSQPQ P
Sbjct: 121 GPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEP-SSSAQISESMQGK-QSQPQCP 180

Query: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGRIQEAMKLFGLIREKGTIPEVVIYTAVVDG 240
           PEADEIFRKMKETGLIPNAVAMLDGLCKDG IQEAMKLFGLIREKGTIPEVV+YTAVVDG
Sbjct: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDG 240

Query: 241 FCKAEKTDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMFESGYSPN 300
           FCKAEK DEAIRIFRKMQNNGI PNAFS+G+LIQGLYK K+L+DAV+FC EM ESG+SPN
Sbjct: 241 FCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPN 300

Query: 301 YTTFVGLIDVLCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNKRASFSPHIWKVFFGD 360
            TTFVGLID LC EKGVDEAH+V+ET KQKGFLI+EK LR+FLNKRA FSPHIW++ FG 
Sbjct: 301 LTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGK 360

Query: 361 KRAPFF 363
           K   FF
Sbjct: 361 KTKEFF 364

[Close]

BLAST of PI0014821.1 vs. NCBI nr
Match: XP_004144563.1 (pentatricopeptide repeat-containing protein At4g38150 [Cucumis sativus] >KGN43381.1 hypothetical protein Csa_020248 [Cucumis sativus])

HSP 1 Score: 615.5 bits (1586), Expect = 2.9e-172
Identity = 322/362 (88.95%), Postives = 331/362 (91.44%), Query Frame = 0


Query: 1   MGAFQFQSRLQVSKILPSIIRKWEIDFPLLHNPLRTPDFSLSPAQSRRFASNSMDDDWDL 60
           MGAFQ QSRLQVSKIL S IRKWEIDFPLLHNPLRTPDFSL PAQSRRFASNSMDDD   
Sbjct: 1   MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAF 60

Query: 61  SESERRNTSPQRRSPLDHREARRVPRGEVSASYPDDNRHQRFNRHSEGSSSRFTKEGSTS 120
           S+SE  NT PQRR P DHREARRVPRG V+ASY  DNR+QRFNRHSEGSSSRFT EGSTS
Sbjct: 61  SDSEPINTPPQRRFPPDHREARRVPRGGVTASY--DNRNQRFNRHSEGSSSRFTNEGSTS 120

Query: 121 RQRSEPLSQKDFSFLEKFKLNTDNQSSDKEKTEENSSSAPVSESMQEKQQSQPQRPPEAD 180
            QRSE LSQKDFSFLEKFKLNTDNQSS KEKTEENSSSAPVSESM EKQQS+PQRPPEAD
Sbjct: 121 PQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEAD 180

Query: 181 EIFRKMKETGLIPNAVAMLDGLCKDGRIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKA 240
           EIF KMKETGLIPNAVAMLDGLCKDG IQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKA
Sbjct: 181 EIFGKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKA 240

Query: 241 EKTDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMFESGYSPNYTTF 300
           EK DEAIRIFRKMQ+NGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEM ESG+ PN TTF
Sbjct: 241 EKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTF 300

Query: 301 VGLIDVLCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNKRASFSPHIWKVFFGDKRAP 360
           VGLID LCNEKGVDEAHSVVETFKQKGFLIDEKALRE LNKRA FSP IWKVFFG+++ P
Sbjct: 301 VGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPP 360

Query: 361 FF 363
           FF
Sbjct: 361 FF 360

[Close]

BLAST of PI0014821.1 vs. NCBI nr
Match: XP_008462006.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g38150 [Cucumis melo] >XP_008462007.1 PREDICTED: pentatricopeptide repeat-containing protein At4g38150 [Cucumis melo] >KAA0050550.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK18790.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 614.0 bits (1582), Expect = 8.3e-172
Identity = 322/362 (88.95%), Postives = 331/362 (91.44%), Query Frame = 0


Query: 1   MGAFQFQSRLQVSKILPSIIRKWEIDFPLLHNPLRTPDFSLSPAQSRRFASNSMDDDWDL 60
           M AFQFQSRLQVSKIL S IRKWEIDFPLLHNPLRTPDFSLSPA SRRF+SNSMDDD   
Sbjct: 1   MAAFQFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAF 60

Query: 61  SESERRNTSPQRRSPLDHREARRVPRGEVSASYPDDNRHQRFNRHSEGSSSRFTKEGSTS 120
           SESE RNT PQRR P DHREARRVPRG V+ SY  DNR+QRFNRHSEGSSSRFT EGSTS
Sbjct: 61  SESEPRNTPPQRRFPPDHREARRVPRGGVTDSY--DNRNQRFNRHSEGSSSRFTNEGSTS 120

Query: 121 RQRSEPLSQKDFSFLEKFKLNTDNQSSDKEKTEENSSSAPVSESMQEKQQSQPQRPPEAD 180
           RQRSE LSQKDFSFLEKFKLNTDNQSS  EKTEENSSSAPVSESMQEKQQSQ QRPP AD
Sbjct: 121 RQRSESLSQKDFSFLEKFKLNTDNQSSGNEKTEENSSSAPVSESMQEKQQSQHQRPPAAD 180

Query: 181 EIFRKMKETGLIPNAVAMLDGLCKDGRIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKA 240
           EIFRKMKE+GLIPNAVAMLDGLCKDG IQEAMKLF LIREKGTIPEVVIYTAVVDGFCKA
Sbjct: 181 EIFRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYTAVVDGFCKA 240

Query: 241 EKTDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMFESGYSPNYTTF 300
           EK DEAIRIFRKMQN GI PNAFSFGVLIQGLYKCKKLDDAVAFCNEM ESG+ PN TTF
Sbjct: 241 EKFDEAIRIFRKMQNKGISPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTF 300

Query: 301 VGLIDVLCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNKRASFSPHIWKVFFGDKRAP 360
           VGLIDVLC+EKGVDEAH+VVETFKQKGFLIDEKALREFLNKRA FSP IWKVFFG+K+AP
Sbjct: 301 VGLIDVLCSEKGVDEAHNVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNKKAP 360

Query: 361 FF 363
           FF
Sbjct: 361 FF 360

[Close]

BLAST of PI0014821.1 vs. NCBI nr
Match: XP_038888880.1 (pentatricopeptide repeat-containing protein At4g38150 isoform X1 [Benincasa hispida])

HSP 1 Score: 556.2 bits (1432), Expect = 2.1e-154
Identity = 300/363 (82.64%), Postives = 316/363 (87.05%), Query Frame = 0


Query: 3   AFQFQSRLQVSKILPSIIRKWEIDFPLLHNPLRTPDFSLSPAQSRRFASNSMDDDWDLSE 62
           AFQFQSRL+V KIL S IRKWE DFPLLH+ LR P+FSLSPAQSR FASNS+DDDW  S+
Sbjct: 2   AFQFQSRLRVWKILSSTIRKWERDFPLLHDSLRMPNFSLSPAQSRCFASNSIDDDWAFSK 61

Query: 63  SERRNTSPQRRS-PLDHREARRVP--RGEVSASYPDDNRHQRFNRHSEGSSSRFTKEGST 122
           SE R + PQRRS P DHREARRVP    EVSA +PDDNR+QRFNR SEGSSSRF  E S 
Sbjct: 62  SEPRTSPPQRRSPPPDHREARRVPNFNKEVSAPFPDDNRNQRFNRRSEGSSSRFANEASI 121

Query: 123 SRQRSEPLSQKDFSFLEKFKLNTDNQSSDKEKTEENSSSAPVSESMQEKQQSQPQRPPEA 182
           SRQR+E L+QKDFSFLE+FKLNTDNQSS  EKTEE SSSA +SESMQEK QSQPQRPPEA
Sbjct: 122 SRQRNESLTQKDFSFLERFKLNTDNQSSSIEKTEE-SSSARLSESMQEK-QSQPQRPPEA 181

Query: 183 DEIFRKMKETGLIPNAVAMLDGLCKDGRIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCK 242
           DEIFRKMKETGLIPNAVAMLDGLCKDG IQEAMKLF LIREKGTIPEVVIYTAVVDGFCK
Sbjct: 182 DEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYTAVVDGFCK 241

Query: 243 AEKTDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMFESGYSPNYTT 302
           AEK DEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKKL+DAVAFC EM ESG+SPN  T
Sbjct: 242 AEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKKLEDAVAFCIEMLESGHSPNLNT 301

Query: 303 FVGLIDVLCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNKRASFSPHIWKVFFGDKRA 362
           FVGLID LCNEKGVDEAHSVVET KQKGFLI+EKALRE LNKRA FSPHIW+V FG K  
Sbjct: 302 FVGLIDELCNEKGVDEAHSVVETLKQKGFLINEKALRELLNKRAPFSPHIWEVVFGKKNK 361

[Close]

BLAST of PI0014821.1 vs. NCBI nr
Match: XP_022969144.1 (pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima] >XP_022969146.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima])

HSP 1 Score: 543.1 bits (1398), Expect = 1.8e-150
Identity = 290/366 (79.23%), Postives = 312/366 (85.25%), Query Frame = 0


Query: 1   MGA--FQFQSRLQVSKILPSIIRKWEIDFPLLHNPLRTPDFSLSPAQSRRFASNSMDDDW 60
           MGA   Q QSRL+VSKIL S IR WE  FPLLH+PLRTPD SLSP +SR F+SNSMDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  DLSESERRNTSPQRRSPLDHREARRVPR--GEVSASYPDDNRHQRFNRHSEGSSSRFTKE 120
           + S SE R++ PQRRSP D REARRVP+  GEVSA YP+DNR+QRFNRH EGS SRF  E
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANE 120

Query: 121 GSTSRQRSEPLSQKDFSFLEKFKLNTDNQSSDKEKTEENSSSAPVSESMQEKQQSQPQRP 180
           G  SR+RSE LSQKDFSFLEKFKLNTDN S+  EKTE  SSSA  SESMQ K QSQPQ P
Sbjct: 121 GPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEP-SSSAQFSESMQGK-QSQPQCP 180

Query: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGRIQEAMKLFGLIREKGTIPEVVIYTAVVDG 240
           PEADEIFRKMKETGLIPNAVAMLDGLCKDG IQEAMKLFGLIREKGTIPEVV+YTAVVDG
Sbjct: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDG 240

Query: 241 FCKAEKTDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMFESGYSPN 300
           FCKAE  DEAIRIFRKMQNNGI PNAFS+GVLIQGLYKCKKL+DAV+FC EM ESG+SPN
Sbjct: 241 FCKAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPN 300

Query: 301 YTTFVGLIDVLCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNKRASFSPHIWKVFFGD 360
            TTFVGLID LC EKGVDEAH+V+ET KQKGFLI+EKALREFLNKRA FSPHIW++ FG 
Sbjct: 301 LTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGK 360

Query: 361 KRAPFF 363
           K   FF
Sbjct: 361 KTKEFF 364

[Close]

BLAST of PI0014821.1 vs. NCBI nr
Match: KAG7011839.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 540.8 bits (1392), Expect = 8.9e-150
Identity = 288/366 (78.69%), Postives = 313/366 (85.52%), Query Frame = 0


Query: 1   MGA--FQFQSRLQVSKILPSIIRKWEIDFPLLHNPLRTPDFSLSPAQSRRFASNSMDDDW 60
           MGA   Q QSRL+VSKIL S IR WE  FPLLH+PLRTPD SLSP +SR F+SNSMDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  DLSESERRNTSPQRRSPLDHREARRVPR--GEVSASYPDDNRHQRFNRHSEGSSSRFTKE 120
           + S+SE R++ PQRRSP D REARRVP+  GEVSA YP+DNR+QRFNRHSEGSSSRF  E
Sbjct: 61  NFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHSEGSSSRFANE 120

Query: 121 GSTSRQRSEPLSQKDFSFLEKFKLNTDNQSSDKEKTEENSSSAPVSESMQEKQQSQPQRP 180
           G  SR R+E LSQKDFSFLEKFKLNTDNQS+  EK E  SSSA  SESMQ K QSQPQ P
Sbjct: 121 GPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEP-SSSAQFSESMQGK-QSQPQCP 180

Query: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGRIQEAMKLFGLIREKGTIPEVVIYTAVVDG 240
           PEADEIFRKMKETGLIPNAVAMLDGLCKDG IQEAMKLFGLIREKGTIPEVV+YTAVVDG
Sbjct: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDG 240

Query: 241 FCKAEKTDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMFESGYSPN 300
           FCKAEK DEAIRIFRKMQNNGI PNAFS+G+LIQGLYK K+L+DAV+FC EM ESG+SPN
Sbjct: 241 FCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPN 300

Query: 301 YTTFVGLIDVLCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNKRASFSPHIWKVFFGD 360
            TTFVGLID LC EKGVDEAH+V+ET KQKGFLI+EK LREFLNKRA FSPHIW++ FG 
Sbjct: 301 LTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGK 360

Query: 361 KRAPFF 363
           K   FF
Sbjct: 361 KTKEFF 364

[Close]

BLAST of PI0014821.1 vs. TAIR 10
Match: AT4G38150.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 266.9 bits (681), Expect = 2.3e-71
Identity = 145/265 (54.72%), Postives = 177/265 (66.79%), Query Frame = 0


Query: 94  PDDNRHQRFNRHSEGSSSRFTKEGSTSRQRSEPLSQKDFSFLEKFKLNTDNQSSDKEKTE 153
           P  NR  R  R S        ++     +    LS  D  FLE+FKL  +  S +  K E
Sbjct: 48  PLPNRPLRGERSSNSHREPPARQAHNLGKSDTTLS--DDGFLEQFKLGVNQDSRETPKPE 107

Query: 154 ENSSSAPVSESMQEKQQSQPQRPPE-ADEIFRKMKETGLIPNAVAMLDGLCKDGRIQEAM 213
           +                 +P  PPE +DEIF+KMKE GLIPNAVAMLDGLCKDG +QEAM
Sbjct: 108 Q--------------YPQEPLPPPEDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAM 167

Query: 214 KLFGLIREKGTIPEVVIYTAVVDGFCKAEKTDEAIRIFRKMQNNGIPPNAFSFGVLIQGL 273
           KLFGL+R+KGTIPEVVIYTAVV+ FCKA K ++A RIFRKMQNNGI PNAFS+GVL+QGL
Sbjct: 168 KLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGL 227

Query: 274 YKCKKLDDAVAFCNEMFESGYSPNYTTFVGLIDVLCNEKGVDEAHSVVETFKQKGFLIDE 333
           Y C  LDDAVAFC+EM ESG+SPN  TFV L+D LC  KGV++A S ++T  QKGF ++ 
Sbjct: 228 YNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNV 287

Query: 334 KALREFLNKRASFSPHIWKVFFGDK 358
           KA++EF++KRA F    W+  F  K
Sbjct: 288 KAVKEFMDKRAPFPSLAWEAIFKKK 296

[Close]

BLAST of PI0014821.1 vs. TAIR 10
Match: AT4G38150.2 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 266.9 bits (681), Expect = 2.3e-71
Identity = 145/265 (54.72%), Postives = 177/265 (66.79%), Query Frame = 0


Query: 94  PDDNRHQRFNRHSEGSSSRFTKEGSTSRQRSEPLSQKDFSFLEKFKLNTDNQSSDKEKTE 153
           P  NR  R  R S        ++     +    LS  D  FLE+FKL  +  S +  K E
Sbjct: 48  PLPNRPLRGERSSNSHREPPARQAHNLGKSDTTLS--DDGFLEQFKLGVNQDSRETPKPE 107

Query: 154 ENSSSAPVSESMQEKQQSQPQRPPE-ADEIFRKMKETGLIPNAVAMLDGLCKDGRIQEAM 213
           +                 +P  PPE +DEIF+KMKE GLIPNAVAMLDGLCKDG +QEAM
Sbjct: 108 Q--------------YPQEPLPPPEDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAM 167

Query: 214 KLFGLIREKGTIPEVVIYTAVVDGFCKAEKTDEAIRIFRKMQNNGIPPNAFSFGVLIQGL 273
           KLFGL+R+KGTIPEVVIYTAVV+ FCKA K ++A RIFRKMQNNGI PNAFS+GVL+QGL
Sbjct: 168 KLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGL 227

Query: 274 YKCKKLDDAVAFCNEMFESGYSPNYTTFVGLIDVLCNEKGVDEAHSVVETFKQKGFLIDE 333
           Y C  LDDAVAFC+EM ESG+SPN  TFV L+D LC  KGV++A S ++T  QKGF ++ 
Sbjct: 228 YNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNV 287

Query: 334 KALREFLNKRASFSPHIWKVFFGDK 358
           KA++EF++KRA F    W+  F  K
Sbjct: 288 KAVKEFMDKRAPFPSLAWEAIFKKK 296

[Close]

BLAST of PI0014821.1 vs. TAIR 10
Match: AT5G03560.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 117.1 bits (292), Expect = 3.0e-26
Identity = 96/310 (30.97%), Postives = 151/310 (48.71%), Query Frame = 0


Query: 47  RRFASNSMDDDW-----DLSESERR---NTSPQRRSPLDHREARRVPRGEVSASYPDDNR 106
           R FA  S    W     DL+ S +R    T+ +  + +D    R++P        P+   
Sbjct: 46  RAFAFYSSSSSWWSSPDDLTASSKRKEKKTTERFSAVIDAVHDRKLP--------PELRG 105

Query: 107 HQRFNRHSEGSSSRFT--KEGSTSRQRSEPLSQKDFSFLEKFKLNTDNQSSDKEK--TEE 166
            + F R    S+S F     G  +RQ S     K  +    F L+ D+   + E   TE+
Sbjct: 106 RRDFVRSKRNSNSLFPWFCGGVFARQFSS--ETKRVNTKVNFSLSDDDSDEETETQVTED 165

Query: 167 NSSS----APVSESMQEKQQSQPQRPPEADEIFRKMKETGLIPNAVAMLDGLCKDGRIQE 226
           +        P     ++    +P+ P    EIF KM+  G    AV M D L KDGR  E
Sbjct: 166 SKKQEPPPPPYDPFSKKPAIEEPEDPKNLQEIFHKMRTEGFTNEAVKMFDALSKDGRTHE 225

Query: 227 AMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKTDEAIRIFRKMQNNGIPPNAFSFGVLIQ 286
           A++LF  I++K  +P+VV +TA+V+ +  A +  E +++F +M  +G+ PNA+++ VLI+
Sbjct: 226 ALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIK 285

Query: 287 GLYKCKKL-DDAVAFCNEMFESGYSPNYTTFVGLIDVLCNEKGVDEAHSVVETFKQKGFL 340
           GL    K   DA  +  EM  +G SPN  T+  + +    E   + A  +++  K KGF+
Sbjct: 286 GLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFV 345

[Close]

BLAST of PI0014821.1 vs. TAIR 10
Match: AT1G63230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 109.8 bits (273), Expect = 4.7e-24
Identity = 51/160 (31.87%), Postives = 91/160 (56.88%), Query Frame = 0


Query: 178 EADEIFRKMKETGLIPNAV---AMLDGLCKDGRIQEAMKLFGLIREKGTIPEVVIYTAVV 237
           EA+EI+  M   G+ P  +   +M+DG CK  R+ +A ++   +  K   P+VV ++ ++
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223

Query: 238 DGFCKAEKTDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMFESGYS 297
           +G+CKA++ D  + IF +M   GI  N  ++  LI G  +   LD A    N M  SG +
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVA 283

Query: 298 PNYTTFVGLIDVLCNEKGVDEAHSVVETF-KQKGFLIDEK 334
           PNY TF  ++  LC++K + +A +++E   K +G  ++++
Sbjct: 284 PNYITFQSMLASLCSKKELRKAFAILEDLQKSEGHHLEDE 323

[Close]

BLAST of PI0014821.1 vs. TAIR 10
Match: AT1G06710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 1.1e-23
Identity = 51/154 (33.12%), Postives = 84/154 (54.55%), Query Frame = 0


Query: 177 PEADEIFRKMKETGLIPNAV---AMLDGLCKDGRIQEAMKLFGLIREKGTIPEVVIYTAV 236
           P+ D  F++  +    PN V   A+LDG CK  R++EA KL   +  +G  P  ++Y A+
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680

Query: 237 VDGFCKAEKTDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMFESGY 296
           +DG CK  K DEA  +  +M  +G P   +++  LI   +K K+ D A    ++M E+  
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740

Query: 297 SPNYTTFVGLIDVLCNEKGVDEAHSVVETFKQKG 328
           +PN   +  +ID LC     DEA+ +++  ++KG
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774

The following BLAST results are available for this feature:

BLAST of PI0014821.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZL5	3.3e-70	54.72	Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana OX...	[more]
Q9M9X9	1.5e-22	33.12	Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidop...	[more]
Q0WVK7	3.3e-22	36.30	Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop...	[more]
Q9LPX2	5.7e-22	36.18	Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop...	[more]
Q9FIX3	1.6e-21	32.48	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]

BLAST of PI0014821.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6C0	1.4e-172	88.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029950 PE=4 SV=1	[more]
A0A1S3CFW0	4.0e-172	88.95	pentatricopeptide repeat-containing protein At4g38150 OS=Cucumis melo OX=3656 GN...	[more]
A0A5D3D5J5	4.0e-172	88.95	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1I1Q2	8.7e-151	79.23	pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita maxima O...	[more]
A0A6J1GKZ0	7.4e-150	78.14	pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita moschata...	[more]

BLAST of PI0014821.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144563.1	2.9e-172	88.95	pentatricopeptide repeat-containing protein At4g38150 [Cucumis sativus] >KGN4338...	[more]
XP_008462006.1	8.3e-172	88.95	PREDICTED: pentatricopeptide repeat-containing protein At4g38150 [Cucumis melo] ...	[more]
XP_038888880.1	2.1e-154	82.64	pentatricopeptide repeat-containing protein At4g38150 isoform X1 [Benincasa hisp...	[more]
XP_022969144.1	1.8e-150	79.23	pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima] >X...	[more]
KAG7011839.1	8.9e-150	78.69	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]

BLAST of PI0014821.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38150.1	2.3e-71	54.72	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G38150.2	2.3e-71	54.72	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G03560.2	3.0e-26	30.97	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G63230.1	4.7e-24	31.88	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G06710.1	1.1e-23	33.12	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 197..222 e-value: 3.4E-5 score: 23.8 coord: 299..328 e-value: 1.4 score: 9.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 225..274 e-value: 5.0E-15 score: 55.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 197..225 e-value: 1.1E-5 score: 23.2 coord: 264..296 e-value: 1.6E-4 score: 19.6 coord: 228..262 e-value: 4.3E-10 score: 37.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 226..260 score: 12.92343
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 261..295 score: 10.621557
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 191..225 score: 9.054091
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 155..350 e-value: 2.5E-36 score: 127.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..179
None	No IPR available	PANTHER	PTHR45613	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 7..359
None	No IPR available	PANTHER	PTHR45613:SF39	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 7..359

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0014821	PI0014821	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0014821.1-exon	PI0014821.1-exon-chr01:4278457..4279467	exon
PI0014821.1-exon	PI0014821.1-exon-chr01:4282253..4283439	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0014821.1-three_prime_utr	PI0014821.1-three_prime_utr-chr01:4278457..4279467	three_prime_UTR
PI0014821.1-three_prime_utr	PI0014821.1-three_prime_utr-chr01:4282253..4282270	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0014821.1-cds	PI0014821.1-cds-chr01:4282271..4283359	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0014821.1-five_prime_utr	PI0014821.1-five_prime_utr-chr01:4283360..4283439	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0014821.1	PI0014821.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding