PI0013892.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0013892.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	ethylene-responsive transcription factor RAP2-1
Location	chr03: 1199416 .. 1201298 (+)
Sequence length	1883
RNA-Seq Expression	PI0013892.1
Synteny	PI0013892.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATGACATATAACATAGTAAGGCATAAAAATTTAGAATTGAAATTGTGGATTAGAGGATTGCGTTGTAAAGGCGCAAAGCAAATTTGGGGAAATCCTAATCCTCTCCTCACATGCGTGACACCATCCCCCCCTTATGTTGGATTCTTATTTTATTTATCTCCTTATCCTCCTAAGCTTAGTTTATGGATGCTCTATAAACTAATTATGCAATTTGCTATTCCTTTCTTTTTTTTTTTTAAAAAAAAGAGATCAAATTGTTAGATTAGATAGACAGACAGAGTGACAGACGATTGAATTTGTCGGCCATCTTTGGATTTGTCCCTTCACCTCTCGACGACGTGGTGGCCGTCACCAATTCTCTAATTCACACACTCCCTCTCTTCCTCTAATTCTTACATATAAAACAAGTACACACACACCCAACTTCATTCCTTCCCCCCTTATCAAACGCCGACCCCTCCAGTACTCCAATTCCAAGCCTTCCTCTTCCACTTTTCTTTCATTCTCCTTGTGACTTGGTCTCTTCATCCTTTTCTTTCTATATCATATTCCATAATATGGTTGTTGTATGATTTGCTCTGATACCATGGAAGAATCCGTGGACACGACTATTCCAGAGAAGCGCAAGCAATCGGGGCGACAAGAGAAGCCATACAGAGGAATTAGGATGAGGAAATGGGGAAAATGGGTAGCCGAGATCAGAGAGCCAAACAAGAGGTCTAGGATTTGGCTTGGTTCTTACACAACCCCTCTCGCCGCTGCTAGAGCCTACGACACCGCAGTCTTCTACTTACGAGGCCCATCCGCCCGTCTTAACTTTCCGGACCTGATTTTACAAGACATGGATCACCAGCTTCTTGACGTTTCACCTTCTTCAATTCGAAAAAGAGCGATTGAGGTCGGTGCCAGAGTGGACGCCGCCGCTCATCAAACTTCTCTCCGCCAATCCAAACCCATCTCCGACAAGCCTGATTTGAACCAGTTTCCGGACCCGGAAAGCTCGGATGAAGATTAATCGATGATCACTGTTTCATAGCCTTTTCCACTTCTGTATTTTCCCCTGTTTTTTCTTTTCCATATCTCCCACTCCAAAAAGAGATTCAAATCCTGGGGATTTTGGAAATTAAAATTGGAATGGACCCATATGGTTCCCTTCTTGATTTGCTATATATCTAAAAATATAGCTTCGAATTTGTAACAGGGGAGATGGTAAACCAAATTTGTTGATCGATCCCTACAGTTATCTATCTTAATTTTTTTTTCTTTCCTGCATTATTTTCTTGTGATTAGTTTGGATTTTTTTTTGTTTTTTGTTTACATATTCCGGGAAAATGGGTGTACGTTTGAAAAGAGATGGAAAAGAAAGAAAGAAAAAAAAGGGAAAAAATCAAAATGAAGGAAAATGCGGCGTTGATTGGTGAAAATTTTGATAAGAAGAAAGAAGAAGAAGATAAGGATGAGTTAGTATTTTGAGGGGCCGCCGTGTGGAGTCCACAAATCGAAGGATAATGTCGCCGTCGCCGTCGTCATGGTGGATGTTTTGCTTGCGAAACGGAAACGGAAACGGAAACCGATATTTGTTCTAGAAGGTCGGTGGTATTTTTATGTTTTTATTTATTTATTATATACTTTACATTGGCAAAGGTGAAGGCTGACAACACCAACAGTGGTTTTTTTAACAAATTTCTTTTGGGAGTTTCCAAAACATTATAAATCCGACCGACCACTTGGCACTTAGCTGGCATTCTCAATTTATTAAATTTTAAATTCTTCCTTATCTTATTGCTTCATCTATTATTATAATTTCAAAATAACTCCCATAATTAAACTTTTTTCCCTAAATATCTTTAAACCTTCTACAATGCTTAGCTAATTCTCAG

mRNA sequence

TATATGACATATAACATAGTAAGGCATAAAAATTTAGAATTGAAATTGTGGATTAGAGGATTGCGTTGTAAAGGCGCAAAGCAAATTTGGGGAAATCCTAATCCTCTCCTCACATGCGTGACACCATCCCCCCCTTATGTTGGATTCTTATTTTATTTATCTCCTTATCCTCCTAAGCTTAGTTTATGGATGCTCTATAAACTAATTATGCAATTTGCTATTCCTTTCTTTTTTTTTTTTAAAAAAAAGAGATCAAATTGTTAGATTAGATAGACAGACAGAGTGACAGACGATTGAATTTGTCGGCCATCTTTGGATTTGTCCCTTCACCTCTCGACGACGTGGTGGCCGTCACCAATTCTCTAATTCACACACTCCCTCTCTTCCTCTAATTCTTACATATAAAACAAGTACACACACACCCAACTTCATTCCTTCCCCCCTTATCAAACGCCGACCCCTCCAGTACTCCAATTCCAAGCCTTCCTCTTCCACTTTTCTTTCATTCTCCTTGTGACTTGGTCTCTTCATCCTTTTCTTTCTATATCATATTCCATAATATGGTTGTTGTATGATTTGCTCTGATACCATGGAAGAATCCGTGGACACGACTATTCCAGAGAAGCGCAAGCAATCGGGGCGACAAGAGAAGCCATACAGAGGAATTAGGATGAGGAAATGGGGAAAATGGGTAGCCGAGATCAGAGAGCCAAACAAGAGGTCTAGGATTTGGCTTGGTTCTTACACAACCCCTCTCGCCGCTGCTAGAGCCTACGACACCGCAGTCTTCTACTTACGAGGCCCATCCGCCCGTCTTAACTTTCCGGACCTGATTTTACAAGACATGGATCACCAGCTTCTTGACGTTTCACCTTCTTCAATTCGAAAAAGAGCGATTGAGGTCGGTGCCAGAGTGGACGCCGCCGCTCATCAAACTTCTCTCCGCCAATCCAAACCCATCTCCGACAAGCCTGATTTGAACCAGTTTCCGGACCCGGAAAGCTCGGATGAAGATTAATCGATGATCACTGTTTCATAGCCTTTTCCACTTCTGTATTTTCCCCTGTTTTTTCTTTTCCATATCTCCCACTCCAAAAAGAGATTCAAATCCTGGGGATTTTGGAAATTAAAATTGGAATGGACCCATATGGTTCCCTTCTTGATTTGCTATATATCTAAAAATATAGCTTCGAATTTGTAACAGGGGAGATGGTAAACCAAATTTGTTGATCGATCCCTACAGTTATCTATCTTAATTTTTTTTTCTTTCCTGCATTATTTTCTTGTGATTAGTTTGGATTTTTTTTTGTTTTTTGTTTACATATTCCGGGAAAATGGGTGTACGTTTGAAAAGAGATGGAAAAGAAAGAAAGAAAAAAAAGGGAAAAAATCAAAATGAAGGAAAATGCGGCGTTGATTGGTGAAAATTTTGATAAGAAGAAAGAAGAAGAAGATAAGGATGAGTTAGTATTTTGAGGGGCCGCCGTGTGGAGTCCACAAATCGAAGGATAATGTCGCCGTCGCCGTCGTCATGGTGGATGTTTTGCTTGCGAAACGGAAACGGAAACGGAAACCGATATTTGTTCTAGAAGGTCGGTGGTATTTTTATGTTTTTATTTATTTATTATATACTTTACATTGGCAAAGGTGAAGGCTGACAACACCAACAGTGGTTTTTTTAACAAATTTCTTTTGGGAGTTTCCAAAACATTATAAATCCGACCGACCACTTGGCACTTAGCTGGCATTCTCAATTTATTAAATTTTAAATTCTTCCTTATCTTATTGCTTCATCTATTATTATAATTTCAAAATAACTCCCATAATTAAACTTTTTTCCCTAAATATCTTTAAACCTTCTACAATGCTTAGCTAATTCTCAG

Coding sequence (CDS)

ATGATTTGCTCTGATACCATGGAAGAATCCGTGGACACGACTATTCCAGAGAAGCGCAAGCAATCGGGGCGACAAGAGAAGCCATACAGAGGAATTAGGATGAGGAAATGGGGAAAATGGGTAGCCGAGATCAGAGAGCCAAACAAGAGGTCTAGGATTTGGCTTGGTTCTTACACAACCCCTCTCGCCGCTGCTAGAGCCTACGACACCGCAGTCTTCTACTTACGAGGCCCATCCGCCCGTCTTAACTTTCCGGACCTGATTTTACAAGACATGGATCACCAGCTTCTTGACGTTTCACCTTCTTCAATTCGAAAAAGAGCGATTGAGGTCGGTGCCAGAGTGGACGCCGCCGCTCATCAAACTTCTCTCCGCCAATCCAAACCCATCTCCGACAAGCCTGATTTGAACCAGTTTCCGGACCCGGAAAGCTCGGATGAAGATTAA

Protein sequence

MICSDTMEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQSKPISDKPDLNQFPDPESSDED

Homology

[Close]

BLAST of PI0013892.1 vs. ExPASy Swiss-Prot
Match: Q8LC30 (Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana OX=3702 GN=RAP2-1 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 6.1e-39
Identity = 89/149 (59.73%), Postives = 105/149 (70.47%), Query Frame = 0


Query: 7   MEESVDTTIPEKRKQSGRQE--------KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSY 66
           ME   + +   KR+Q  ++E        KPYRGIR RKWGKWVAEIREPNKRSR+WLGSY
Sbjct: 1   MEREQEESTMRKRRQPPQEEVPNHVATRKPYRGIRRRKWGKWVAEIREPNKRSRLWLGSY 60

Query: 67  TTPLAAARAYDTAVFYLRGPSARLNFPDLILQDMDH----QLLDVSPSSIRKRAIEVGAR 126
           TT +AAARAYD AVFYLRGPSARLNFPDL+LQ+ DH       D+  + IR++A EVGAR
Sbjct: 61  TTDIAAARAYDVAVFYLRGPSARLNFPDLLLQEEDHLSAATTADMPAALIREKAAEVGAR 120

Query: 127 VDA--AAHQTSLRQSKPISDKPDLNQFPD 142
           VDA  A+   S+  S P   KPDLNQ P+
Sbjct: 121 VDALLASAAPSMAHSTPPVIKPDLNQIPE 149

[Close]

BLAST of PI0013892.1 vs. ExPASy Swiss-Prot
Match: Q9FH94 (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 GN=ERF010 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.3e-33
Identity = 86/177 (48.59%), Postives = 104/177 (58.76%), Query Frame = 0


Query: 12  DTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTA 71
           D  +P  RK    +++PY+GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTA
Sbjct: 8   DVAVPGTRK----RDRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTA 67

Query: 72  VFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAA------------ 131
           VFYLRGP+ARLNFP+L L        D+S ++IRK+A EVGA+VDA              
Sbjct: 68  VFYLRGPTARLNFPEL-LPGEKFSDEDMSAATIRKKATEVGAQVDALGTAVQNNRHRVFG 127

Query: 132 ----------------------------HQTSLRQSKPISDKPDLNQFPDPESSDED 149
                                           LR    + D+ DLN+ PDPESSDE+
Sbjct: 128 QNRDSDVDNKNFHRNYQNGEREEEEEDEDDKRLRSGGRLLDRVDLNKLPDPESSDEE 179

[Close]

BLAST of PI0013892.1 vs. ExPASy Swiss-Prot
Match: Q8W3M3 (Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana OX=3702 GN=RAP2-9 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.3e-33
Identity = 80/138 (57.97%), Postives = 97/138 (70.29%), Query Frame = 0


Query: 7   MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR 66
           ++E +  T   KR      EK Y+GIRMRKWGKWVAEIREPNKRSRIWLGSY T +AAAR
Sbjct: 14  VKEGMVMTEKPKRNLISSNEKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAAR 73

Query: 67  AYDTAVFYLRGPSARLNFPDLILQD---MDHQLLDVSPSSIRKRAIEVGARVDAAAHQTS 126
           AYDTAVFYLRGPSARLNFP+ + +D    +    D+SP+ IRK+A EVGARVDA      
Sbjct: 74  AYDTAVFYLRGPSARLNFPEEVFKDGNGGEGLGGDMSPTLIRKKAAEVGARVDA-----E 133

Query: 127 LRQSKPISDKPDLNQFPD 142
           LR    + +  D+N+ P+
Sbjct: 134 LRLENRMVENLDMNKLPE 146

[Close]

BLAST of PI0013892.1 vs. ExPASy Swiss-Prot
Match: O22174 (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 GN=ERF008 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 5.0e-33
Identity = 80/146 (54.79%), Postives = 97/146 (66.44%), Query Frame = 0


Query: 24  RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRGPSARLN 83
           R  KPY+GIRMRKWGKWVAEIREPNKRSRIWLGSY TP AAARAYDTAVFYLRGPSARLN
Sbjct: 23  RDLKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSARLN 82

Query: 84  FPDLI----LQDMDHQLLDVSPSSIRKRAIEVGARVDAAAH-----------------QT 143
           FP+L+    + +   +  D+S + IR++A EVGA+VDA                    + 
Sbjct: 83  FPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVNTGGENRGDYEKIEN 142

Query: 144 SLRQSKPISDKPDLNQFPDPESSDED 149
             +      ++ DLN+ PDPE+SD D
Sbjct: 143 CRKSGNGSLERVDLNKLPDPENSDGD 168

[Close]

BLAST of PI0013892.1 vs. ExPASy Swiss-Prot
Match: Q9SNE1 (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 GN=ERF011 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 5.0e-33
Identity = 78/137 (56.93%), Postives = 100/137 (72.99%), Query Frame = 0


Query: 24  RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRGPSARLN 83
           ++E+P++GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+A LN
Sbjct: 16  KRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLN 75

Query: 84  FPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDA--AAHQTSLRQSKPISDK-------- 143
           FP+L+         D+S ++IRK+A EVGA+VDA  A    + ++ +  S K        
Sbjct: 76  FPELLPCTSAE---DMSAATIRKKATEVGAQVDAIGATVVQNNKRRRVFSQKRDFGGGLL 135

Query: 144 --PDLNQFPDPESSDED 149
              DLN+ PDPE+ D+D
Sbjct: 136 ELVDLNKLPDPENLDDD 149

[Close]

BLAST of PI0013892.1 vs. ExPASy TrEMBL
Match: A0A5A7V5C8 (Ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00520 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.1e-72
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 7   MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR 66
           MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR
Sbjct: 1   MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR 60

Query: 67  AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ 126
           AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ
Sbjct: 61  AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ 120

Query: 127 SKPISDKPDLNQFPDPESSDED 149
           SKPISDKPDLNQFPDPESSDED
Sbjct: 121 SKPISDKPDLNQFPDPESSDED 142

[Close]

BLAST of PI0013892.1 vs. ExPASy TrEMBL
Match: A0A1S3BAR1 (ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo OX=3656 GN=LOC103487870 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.1e-72
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 7   MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR 66
           MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR
Sbjct: 1   MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR 60

Query: 67  AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ 126
           AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ
Sbjct: 61  AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ 120

Query: 127 SKPISDKPDLNQFPDPESSDED 149
           SKPISDKPDLNQFPDPESSDED
Sbjct: 121 SKPISDKPDLNQFPDPESSDED 142

[Close]

BLAST of PI0013892.1 vs. ExPASy TrEMBL
Match: A0A0A0LR87 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G356600 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.1e-71
Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 7   MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR 66
           MEESV+TTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR
Sbjct: 1   MEESVETTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR 60

Query: 67  AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ 126
           AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ
Sbjct: 61  AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ 120

Query: 127 SKPISDKPDLNQFPDPESSDED 149
           SKPISDKPDLNQFPDPESS ED
Sbjct: 121 SKPISDKPDLNQFPDPESSGED 142

[Close]

BLAST of PI0013892.1 vs. ExPASy TrEMBL
Match: A0A6J1HCJ9 (ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita moschata OX=3662 GN=LOC111462838 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 9.3e-67
Identity = 133/143 (93.01%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 7   MEESVDTTIPEKRKQ-SGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 66
           ME++ D+TIPEKRKQ +GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA
Sbjct: 1   MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60

Query: 67  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLR 126
           RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAA++TSLR
Sbjct: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLR 120

Query: 127 QSKPISDKPDLNQFPDPESSDED 149
           QSKPIS+KPDLNQFP+PESSDED
Sbjct: 121 QSKPISEKPDLNQFPEPESSDED 143

[Close]

BLAST of PI0013892.1 vs. ExPASy TrEMBL
Match: A0A6J1KB24 (ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita maxima OX=3661 GN=LOC111492253 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.1e-66
Identity = 132/143 (92.31%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 7   MEESVDTTIPEKRKQ-SGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 66
           ME++ D+TIPEKRKQ +GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA
Sbjct: 1   MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60

Query: 67  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLR 126
           RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIR+RAIEVGARVDAAA++TSLR
Sbjct: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRRRAIEVGARVDAAANRTSLR 120

Query: 127 QSKPISDKPDLNQFPDPESSDED 149
           QSKPIS+KPDLNQFP+PESSDED
Sbjct: 121 QSKPISEKPDLNQFPEPESSDED 143

[Close]

BLAST of PI0013892.1 vs. NCBI nr
Match: XP_008444599.1 (PREDICTED: ethylene-responsive transcription factor RAP2-1 [Cucumis melo] >KAA0060919.1 ethylene-responsive transcription factor RAP2-1 [Cucumis melo var. makuwa])

HSP 1 Score: 282.3 bits (721), Expect = 2.3e-72
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 7   MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR 66
           MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR
Sbjct: 1   MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR 60

Query: 67  AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ 126
           AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ
Sbjct: 61  AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ 120

Query: 127 SKPISDKPDLNQFPDPESSDED 149
           SKPISDKPDLNQFPDPESSDED
Sbjct: 121 SKPISDKPDLNQFPDPESSDED 142

[Close]

BLAST of PI0013892.1 vs. NCBI nr
Match: XP_004142875.1 (ethylene-responsive transcription factor RAP2-1 [Cucumis sativus] >KGN62486.1 hypothetical protein Csa_018768 [Cucumis sativus])

HSP 1 Score: 278.1 bits (710), Expect = 4.4e-71
Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 7   MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR 66
           MEESV+TTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR
Sbjct: 1   MEESVETTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR 60

Query: 67  AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ 126
           AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ
Sbjct: 61  AYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQ 120

Query: 127 SKPISDKPDLNQFPDPESSDED 149
           SKPISDKPDLNQFPDPESS ED
Sbjct: 121 SKPISDKPDLNQFPDPESSGED 142

[Close]

BLAST of PI0013892.1 vs. NCBI nr
Match: XP_038884237.1 (ethylene-responsive transcription factor RAP2-1-like [Benincasa hispida])

HSP 1 Score: 275.0 bits (702), Expect = 3.7e-70
Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 7   MEESVDTTIPEKRK-QSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 66
           MEESV+TTIPEKRK Q+GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA
Sbjct: 1   MEESVETTIPEKRKQQTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60

Query: 67  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLR 126
           RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLR
Sbjct: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLR 120

Query: 127 QSKPISDKPDLNQFPDPESSDED 149
           QSKPISDKPDLNQFPDPESSDED
Sbjct: 121 QSKPISDKPDLNQFPDPESSDED 143

[Close]

BLAST of PI0013892.1 vs. NCBI nr
Match: KAG7029328.1 (Ethylene-responsive transcription factor RAP2-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 266.2 bits (679), Expect = 1.7e-67
Identity = 135/146 (92.47%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 4   SDTMEESVDTTIPEKRKQ-SGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPL 63
           S+TME++ D+TIPEKRKQ +GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPL
Sbjct: 85  SNTMEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPL 144

Query: 64  AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQT 123
           AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAA++T
Sbjct: 145 AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRT 204

Query: 124 SLRQSKPISDKPDLNQFPDPESSDED 149
           SLRQSKPIS+KPDLNQFP+PESSDED
Sbjct: 205 SLRQSKPISEKPDLNQFPEPESSDED 230

[Close]

BLAST of PI0013892.1 vs. NCBI nr
Match: XP_022962377.1 (ethylene-responsive transcription factor RAP2-1-like [Cucurbita moschata] >XP_023545716.1 ethylene-responsive transcription factor RAP2-1-like [Cucurbita pepo subsp. pepo] >KAG6598357.1 Ethylene-responsive transcription factor RAP2-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 262.7 bits (670), Expect = 1.9e-66
Identity = 133/143 (93.01%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 7   MEESVDTTIPEKRKQ-SGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 66
           ME++ D+TIPEKRKQ +GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA
Sbjct: 1   MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60

Query: 67  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLR 126
           RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAA++TSLR
Sbjct: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLR 120

Query: 127 QSKPISDKPDLNQFPDPESSDED 149
           QSKPIS+KPDLNQFP+PESSDED
Sbjct: 121 QSKPISEKPDLNQFPEPESSDED 143

[Close]

BLAST of PI0013892.1 vs. TAIR 10
Match: AT1G46768.1 (related to AP2 1 )

HSP 1 Score: 161.8 bits (408), Expect = 4.3e-40
Identity = 89/149 (59.73%), Postives = 105/149 (70.47%), Query Frame = 0


Query: 7   MEESVDTTIPEKRKQSGRQE--------KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSY 66
           ME   + +   KR+Q  ++E        KPYRGIR RKWGKWVAEIREPNKRSR+WLGSY
Sbjct: 1   MEREQEESTMRKRRQPPQEEVPNHVATRKPYRGIRRRKWGKWVAEIREPNKRSRLWLGSY 60

Query: 67  TTPLAAARAYDTAVFYLRGPSARLNFPDLILQDMDH----QLLDVSPSSIRKRAIEVGAR 126
           TT +AAARAYD AVFYLRGPSARLNFPDL+LQ+ DH       D+  + IR++A EVGAR
Sbjct: 61  TTDIAAARAYDVAVFYLRGPSARLNFPDLLLQEEDHLSAATTADMPAALIREKAAEVGAR 120

Query: 127 VDA--AAHQTSLRQSKPISDKPDLNQFPD 142
           VDA  A+   S+  S P   KPDLNQ P+
Sbjct: 121 VDALLASAAPSMAHSTPPVIKPDLNQIPE 149

[Close]

BLAST of PI0013892.1 vs. TAIR 10
Match: AT4G06746.1 (related to AP2 9 )

HSP 1 Score: 144.1 bits (362), Expect = 9.3e-35
Identity = 80/138 (57.97%), Postives = 97/138 (70.29%), Query Frame = 0


Query: 7   MEESVDTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAAR 66
           ++E +  T   KR      EK Y+GIRMRKWGKWVAEIREPNKRSRIWLGSY T +AAAR
Sbjct: 14  VKEGMVMTEKPKRNLISSNEKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAAR 73

Query: 67  AYDTAVFYLRGPSARLNFPDLILQD---MDHQLLDVSPSSIRKRAIEVGARVDAAAHQTS 126
           AYDTAVFYLRGPSARLNFP+ + +D    +    D+SP+ IRK+A EVGARVDA      
Sbjct: 74  AYDTAVFYLRGPSARLNFPEEVFKDGNGGEGLGGDMSPTLIRKKAAEVGARVDA-----E 133

Query: 127 LRQSKPISDKPDLNQFPD 142
           LR    + +  D+N+ P+
Sbjct: 134 LRLENRMVENLDMNKLPE 146

[Close]

BLAST of PI0013892.1 vs. TAIR 10
Match: AT5G67190.1 (DREB and EAR motif protein 2 )

HSP 1 Score: 144.1 bits (362), Expect = 9.3e-35
Identity = 86/177 (48.59%), Postives = 104/177 (58.76%), Query Frame = 0


Query: 12  DTTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTA 71
           D  +P  RK    +++PY+GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTA
Sbjct: 8   DVAVPGTRK----RDRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTA 67

Query: 72  VFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAA------------ 131
           VFYLRGP+ARLNFP+L L        D+S ++IRK+A EVGA+VDA              
Sbjct: 68  VFYLRGPTARLNFPEL-LPGEKFSDEDMSAATIRKKATEVGAQVDALGTAVQNNRHRVFG 127

Query: 132 ----------------------------HQTSLRQSKPISDKPDLNQFPDPESSDED 149
                                           LR    + D+ DLN+ PDPESSDE+
Sbjct: 128 QNRDSDVDNKNFHRNYQNGEREEEEEDEDDKRLRSGGRLLDRVDLNKLPDPESSDEE 179

[Close]

BLAST of PI0013892.1 vs. TAIR 10
Match: AT2G23340.1 (DREB and EAR motif protein 3 )

HSP 1 Score: 142.1 bits (357), Expect = 3.5e-34
Identity = 80/146 (54.79%), Postives = 97/146 (66.44%), Query Frame = 0


Query: 24  RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRGPSARLN 83
           R  KPY+GIRMRKWGKWVAEIREPNKRSRIWLGSY TP AAARAYDTAVFYLRGPSARLN
Sbjct: 23  RDLKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSARLN 82

Query: 84  FPDLI----LQDMDHQLLDVSPSSIRKRAIEVGARVDAAAH-----------------QT 143
           FP+L+    + +   +  D+S + IR++A EVGA+VDA                    + 
Sbjct: 83  FPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVNTGGENRGDYEKIEN 142

Query: 144 SLRQSKPISDKPDLNQFPDPESSDED 149
             +      ++ DLN+ PDPE+SD D
Sbjct: 143 CRKSGNGSLERVDLNKLPDPENSDGD 168

[Close]

BLAST of PI0013892.1 vs. TAIR 10
Match: AT3G50260.1 (cooperatively regulated by ethylene and jasmonate 1 )

HSP 1 Score: 142.1 bits (357), Expect = 3.5e-34
Identity = 78/137 (56.93%), Postives = 100/137 (72.99%), Query Frame = 0


Query: 24  RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRGPSARLN 83
           ++E+P++GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+A LN
Sbjct: 16  KRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLN 75

Query: 84  FPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDA--AAHQTSLRQSKPISDK-------- 143
           FP+L+         D+S ++IRK+A EVGA+VDA  A    + ++ +  S K        
Sbjct: 76  FPELLPCTSAE---DMSAATIRKKATEVGAQVDAIGATVVQNNKRRRVFSQKRDFGGGLL 135

Query: 144 --PDLNQFPDPESSDED 149
              DLN+ PDPE+ D+D
Sbjct: 136 ELVDLNKLPDPENLDDD 149

The following BLAST results are available for this feature:

BLAST of PI0013892.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LC30	6.1e-39	59.73	Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FH94	1.3e-33	48.59	Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8W3M3	1.3e-33	57.97	Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana OX=3702 ...	[more]
O22174	5.0e-33	54.79	Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SNE1	5.0e-33	56.93	Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of PI0013892.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V5C8	1.1e-72	100.00	Ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BAR1	1.1e-72	100.00	ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LR87	2.1e-71	98.59	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G356600 PE=...	[more]
A0A6J1HCJ9	9.3e-67	93.01	ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1KB24	2.1e-66	92.31	ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of PI0013892.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444599.1	2.3e-72	100.00	PREDICTED: ethylene-responsive transcription factor RAP2-1 [Cucumis melo] >KAA00...	[more]
XP_004142875.1	4.4e-71	98.59	ethylene-responsive transcription factor RAP2-1 [Cucumis sativus] >KGN62486.1 hy...	[more]
XP_038884237.1	3.7e-70	97.90	ethylene-responsive transcription factor RAP2-1-like [Benincasa hispida]	[more]
KAG7029328.1	1.7e-67	92.47	Ethylene-responsive transcription factor RAP2-1, partial [Cucurbita argyrosperma...	[more]
XP_022962377.1	1.9e-66	93.01	ethylene-responsive transcription factor RAP2-1-like [Cucurbita moschata] >XP_02...	[more]

BLAST of PI0013892.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G46768.1	4.3e-40	59.73	related to AP2 1	[more]
AT4G06746.1	9.3e-35	57.97	related to AP2 9	[more]
AT5G67190.1	9.3e-35	48.59	DREB and EAR motif protein 2	[more]
AT2G23340.1	3.5e-34	54.79	DREB and EAR motif protein 3	[more]
AT3G50260.1	3.5e-34	56.93	cooperatively regulated by ethylene and jasmonate 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 67..87 score: 52.99 coord: 29..40 score: 64.24
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 28..91 e-value: 6.8E-35 score: 131.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 29..77 e-value: 1.4E-11 score: 44.5
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 28..85 score: 22.207401
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 29..87 e-value: 5.10019E-29 score: 98.883
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 28..86 e-value: 1.3E-24 score: 88.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..148
None	No IPR available	PANTHER	PTHR31729:SF2	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED	coord: 10..146
None	No IPR available	PANTHER	PTHR31729	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED	coord: 10..146
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 28..86

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0013892	PI0013892	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0013892.1-five_prime_utr	PI0013892.1-five_prime_utr-chr03:1199416..1199986	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0013892.1-exon	PI0013892.1-exon-chr03:1199416..1201298	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0013892.1-cds	PI0013892.1-cds-chr03:1199987..1200433	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0013892.1-three_prime_utr	PI0013892.1-three_prime_utr-chr03:1200434..1201298	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0013892.1	PI0013892.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity