PI0013686.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0013686.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr12: 17009852 .. 17010733 (-)
Sequence length	438
RNA-Seq Expression	PI0013686.1
Synteny	PI0013686.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGACCAAGAGGCGCCATGTTGTTCCCTTCTACAGTTGAAGTGTTTTGTCTGAATGCAGTTTCTGAGCTCGTAGATTTGTCGCAAACACCTATCCCAGGCGGCATGTGTTCCAAGGTGTCTCTCAACCGCACAATCACACTTCTTCAGAACAAAGAAGAAGAGAGACACCTGAAAACCCTCAAGAAGATTAAGGGGACACAAGGCAAGGAAGAAGAAGAAGGTACCCCACTCATTCCACCCCCAAAAAAGAAAGAACCCTCATGGATCTTCCGATATGCATCCCAGCGACAAGAAACTCAAAAAGACGTGCCCATTAATTCCAAACCTTTGGCCATCCTCCCCCTCTTAAAACCCTCTAAATCGTCTAACTCCAAACCTTCCAAGCCCAAATCGCAATCTCTATCTCCATTGCTTTCCATAATCCAAATCCAACCTCCCAAAGTCCAAACTCCACCACCTCTCAAAATCCAAACACCACCATTCGAATCCTAGAAGTGCGATGAGCCTCTATCACCTGCATTACTTTCCCTGCTTCATAATCCATTGACCATCTCCACCACTATTACTACCTCCATCTCGCCATCCTCCTCATCGCATCCTAACCTAAACCACCCCATATGTGACCAAAAGAGCGTGGCAGAAAAAGAGTTCATTGACCTTGCAGGAAAACTACCACGCGATCCTTCTCCTCTACCACCTATTATTGACATCACTGAGGAGGACGATGTGGTTATTACAGTGAAAAGTCCTGCCAAGCCGCCACCCAAAGCCAGATCCAAGGAACATGTTGATGACCCACTCGTCAAAGGCAAAGTTGTTGCCTCTGATGTAGCAAGCGAGACAAGTTTTCGTTCATCCCCTAATGTAGAATCTTAG

mRNA sequence

ATGGAAGGACCAAGAGGCGCCATGTTGTTCCCTTCTACAGTTGAAGTGTTTTGTCTGAATGCAGTTTCTGAGCTCGTAGATTTGTCGCAAACACCTATCCCAGGCGGCATGTGTTCCAAGGTGTCTCTCAACCGCACAATCACACTTCTTCAGAACAAAGAAGAAGAGAGACACCTGAAAACCCTCAAGAAGATTAAGGGGACACAAGGCAAGGAAGAAGAAGAAGGAAAACTACCACGCGATCCTTCTCCTCTACCACCTATTATTGACATCACTGAGGAGGACGATGTGGTTATTACAGTGAAAAGTCCTGCCAAGCCGCCACCCAAAGCCAGATCCAAGGAACATGTTGATGACCCACTCGTCAAAGGCAAAGTTGTTGCCTCTGATGTAGCAAGCGAGACAAGTTTTCGTTCATCCCCTAATGTAGAATCTTAG

Coding sequence (CDS)

ATGGAAGGACCAAGAGGCGCCATGTTGTTCCCTTCTACAGTTGAAGTGTTTTGTCTGAATGCAGTTTCTGAGCTCGTAGATTTGTCGCAAACACCTATCCCAGGCGGCATGTGTTCCAAGGTGTCTCTCAACCGCACAATCACACTTCTTCAGAACAAAGAAGAAGAGAGACACCTGAAAACCCTCAAGAAGATTAAGGGGACACAAGGCAAGGAAGAAGAAGAAGGAAAACTACCACGCGATCCTTCTCCTCTACCACCTATTATTGACATCACTGAGGAGGACGATGTGGTTATTACAGTGAAAAGTCCTGCCAAGCCGCCACCCAAAGCCAGATCCAAGGAACATGTTGATGACCCACTCGTCAAAGGCAAAGTTGTTGCCTCTGATGTAGCAAGCGAGACAAGTTTTCGTTCATCCCCTAATGTAGAATCTTAG

Protein sequence

MEGPRGAMLFPSTVEVFCLNAVSELVDLSQTPIPGGMCSKVSLNRTITLLQNKEEERHLKTLKKIKGTQGKEEEEGKLPRDPSPLPPIIDITEEDDVVITVKSPAKPPPKARSKEHVDDPLVKGKVVASDVASETSFRSSPNVES

Homology

[Close]

BLAST of PI0013686.1 vs. ExPASy TrEMBL
Match: A0A5A7SLS8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00080 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.9e-16
Identity = 51/85 (60.00%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 1   MEGPRGAMLFPSTVEVFCLNAVSELVDLSQTPIPGGMCSKVSLNRTITLLQNKEEERHLK 60
           M+ P+G M FPST+E  CL AV +L+  SQ PI G + S+ +LN+TITL QNKEEERHLK
Sbjct: 26  MKTPQGIMPFPSTIEALCLKAVPKLLAFSQAPIFGSVSSQATLNQTITLHQNKEEERHLK 85

Query: 61  TLKKIKGTQGKEEEEGKLPRDPSPL 86
           TL K+KG    EEEE  LP  PSPL
Sbjct: 86  TLNKVKG----EEEEASLPPPPSPL 106

[Close]

BLAST of PI0013686.1 vs. ExPASy TrEMBL
Match: A0A5A7UUR1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold279G00010 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 9.3e-11
Identity = 46/106 (43.40%), Postives = 60/106 (56.60%), Query Frame = 0


Query: 1   MEGPRGAMLFPSTVEVFCLNAVSELVDLSQTPIPGGMCSKVSLNRTITLLQNKEEERHLK 60
           ME P+  M FP T++  CL AV EL    Q PI  G+C + +LN+TI L QNKEEER +K
Sbjct: 40  MEAPKDIMPFPFTIKALCLKAVPELSTFLQAPISDGVCFQATLNQTIMLHQNKEEERCIK 99

Query: 61  TLKKIKGTQGKEEEEGKLPRDPSPLPPIIDITEEDDVVITVKSPAK 107
           TL K+KG    EEEE   P      PP +   +  D V +++   K
Sbjct: 100 TLNKVKG----EEEEASSP------PPPLKRKKSHDSVFSLQKKGK 135

[Close]

BLAST of PI0013686.1 vs. ExPASy TrEMBL
Match: A0A5A7U4J2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46449G00010 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 2.1e-10
Identity = 42/82 (51.22%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 1   MEGPRGAMLFPSTVEVFCLNAVSELVDLSQTPIPGGMCSKVSLNRTITLLQNKEEERHLK 60
           M+ P+  M FP T++  CL  V EL   SQ PI   +CS+V+LN+TITL QNKEE+R LK
Sbjct: 40  MKAPKDIMPFPFTIKALCLKEVPELSTFSQAPIFSFVCSQVTLNQTITLHQNKEEQRCLK 99

Query: 61  TLKKIKGTQGKEEEEGKLPRDP 83
           TL K+KG    EE+E   P  P
Sbjct: 100 TLNKVKG----EEKEASPPPPP 117

[Close]

BLAST of PI0013686.1 vs. ExPASy TrEMBL
Match: A0A5D3E1R7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00150 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 4.6e-10
Identity = 41/82 (50.00%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 1   MEGPRGAMLFPSTVEVFCLNAVSELVDLSQTPIPGGMCSKVSLNRTITLLQNKEEERHLK 60
           ME P+  M FP T++  CL  V EL   SQ PI   +CS+ +LN+TI L QNKEE+R LK
Sbjct: 26  MEAPKDIMPFPFTIKALCLKEVPELSTFSQAPISSFVCSQATLNQTIMLHQNKEEQRCLK 85

Query: 61  TLKKIKGTQGKEEEEGKLPRDP 83
           TL K+KG    EE+E   P  P
Sbjct: 86  TLNKVKG----EEKEASPPPPP 103

[Close]

BLAST of PI0013686.1 vs. ExPASy TrEMBL
Match: A0A5A7UQF9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G002190 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 4.6e-10
Identity = 41/82 (50.00%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 1   MEGPRGAMLFPSTVEVFCLNAVSELVDLSQTPIPGGMCSKVSLNRTITLLQNKEEERHLK 60
           ME P+  M FP T++  CL  V EL   SQ PI   +CS+ +LN+TI L QNKEE+R LK
Sbjct: 26  MEAPKDIMPFPFTIKALCLKEVPELSTFSQAPISSFVCSQATLNQTIMLHQNKEEQRCLK 85

Query: 61  TLKKIKGTQGKEEEEGKLPRDP 83
           TL K+KG    EE+E   P  P
Sbjct: 86  TLNKVKG----EEKEASPPPPP 103

[Close]

BLAST of PI0013686.1 vs. NCBI nr
Match: KAA0031700.1 (hypothetical protein E6C27_scaffold139G004840 [Cucumis melo var. makuwa] >TYK04412.1 hypothetical protein E5676_scaffold409G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 95.5 bits (236), Expect = 4.0e-16
Identity = 51/85 (60.00%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 1   MEGPRGAMLFPSTVEVFCLNAVSELVDLSQTPIPGGMCSKVSLNRTITLLQNKEEERHLK 60
           M+ P+G M FPST+E  CL AV +L+  SQ PI G + S+ +LN+TITL QNKEEERHLK
Sbjct: 26  MKTPQGIMPFPSTIEALCLKAVPKLLAFSQAPIFGSVSSQATLNQTITLHQNKEEERHLK 85

Query: 61  TLKKIKGTQGKEEEEGKLPRDPSPL 86
           TL K+KG    EEEE  LP  PSPL
Sbjct: 86  TLNKVKG----EEEEASLPPPPSPL 106

[Close]

BLAST of PI0013686.1 vs. NCBI nr
Match: KAA0057279.1 (hypothetical protein E6C27_scaffold280G001200 [Cucumis melo var. makuwa] >TYK27636.1 hypothetical protein E5676_scaffold279G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 76.6 bits (187), Expect = 1.9e-10
Identity = 46/106 (43.40%), Postives = 60/106 (56.60%), Query Frame = 0


Query: 1   MEGPRGAMLFPSTVEVFCLNAVSELVDLSQTPIPGGMCSKVSLNRTITLLQNKEEERHLK 60
           ME P+  M FP T++  CL AV EL    Q PI  G+C + +LN+TI L QNKEEER +K
Sbjct: 40  MEAPKDIMPFPFTIKALCLKAVPELSTFLQAPISDGVCFQATLNQTIMLHQNKEEERCIK 99

Query: 61  TLKKIKGTQGKEEEEGKLPRDPSPLPPIIDITEEDDVVITVKSPAK 107
           TL K+KG    EEEE   P      PP +   +  D V +++   K
Sbjct: 100 TLNKVKG----EEEEASSP------PPPLKRKKSHDSVFSLQKKGK 135

[Close]

BLAST of PI0013686.1 vs. NCBI nr
Match: KAA0050752.1 (hypothetical protein E6C27_scaffold46449G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 75.5 bits (184), Expect = 4.3e-10
Identity = 42/82 (51.22%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 1   MEGPRGAMLFPSTVEVFCLNAVSELVDLSQTPIPGGMCSKVSLNRTITLLQNKEEERHLK 60
           M+ P+  M FP T++  CL  V EL   SQ PI   +CS+V+LN+TITL QNKEE+R LK
Sbjct: 40  MKAPKDIMPFPFTIKALCLKEVPELSTFSQAPIFSFVCSQVTLNQTITLHQNKEEQRCLK 99

Query: 61  TLKKIKGTQGKEEEEGKLPRDP 83
           TL K+KG    EE+E   P  P
Sbjct: 100 TLNKVKG----EEKEASPPPPP 117

[Close]

BLAST of PI0013686.1 vs. NCBI nr
Match: TYK30047.1 (hypothetical protein E5676_scaffold216G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 74.3 bits (181), Expect = 9.5e-10
Identity = 41/82 (50.00%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 1   MEGPRGAMLFPSTVEVFCLNAVSELVDLSQTPIPGGMCSKVSLNRTITLLQNKEEERHLK 60
           ME P+  M FP T++  CL  V EL   SQ PI   +CS+ +LN+TI L QNKEE+R LK
Sbjct: 26  MEAPKDIMPFPFTIKALCLKEVPELSTFSQAPISSFVCSQATLNQTIMLHQNKEEQRCLK 85

Query: 61  TLKKIKGTQGKEEEEGKLPRDP 83
           TL K+KG    EE+E   P  P
Sbjct: 86  TLNKVKG----EEKEASPPPPP 103

[Close]

BLAST of PI0013686.1 vs. NCBI nr
Match: KAA0057358.1 (hypothetical protein E6C27_scaffold280G002190 [Cucumis melo var. makuwa])

HSP 1 Score: 74.3 bits (181), Expect = 9.5e-10
Identity = 41/82 (50.00%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 1   MEGPRGAMLFPSTVEVFCLNAVSELVDLSQTPIPGGMCSKVSLNRTITLLQNKEEERHLK 60
           ME P+  M FP T++  CL  V EL   SQ PI   +CS+ +LN+TI L QNKEE+R LK
Sbjct: 26  MEAPKDIMPFPFTIKALCLKEVPELSTFSQAPISSFVCSQATLNQTIMLHQNKEEQRCLK 85

Query: 61  TLKKIKGTQGKEEEEGKLPRDP 83
           TL K+KG    EE+E   P  P
Sbjct: 86  TLNKVKG----EEKEASPPPPP 103

The following BLAST results are available for this feature:

BLAST of PI0013686.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0013686.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SLS8	1.9e-16	60.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UUR1	9.3e-11	43.40	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U4J2	2.1e-10	51.22	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3E1R7	4.6e-10	50.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UQF9	4.6e-10	50.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of PI0013686.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0031700.1	4.0e-16	60.00	hypothetical protein E6C27_scaffold139G004840 [Cucumis melo var. makuwa] >TYK044...	[more]
KAA0057279.1	1.9e-10	43.40	hypothetical protein E6C27_scaffold280G001200 [Cucumis melo var. makuwa] >TYK276...	[more]
KAA0050752.1	4.3e-10	51.22	hypothetical protein E6C27_scaffold46449G00010 [Cucumis melo var. makuwa]	[more]
TYK30047.1	9.5e-10	50.00	hypothetical protein E5676_scaffold216G00150 [Cucumis melo var. makuwa]	[more]
KAA0057358.1	9.5e-10	50.00	hypothetical protein E6C27_scaffold280G002190 [Cucumis melo var. makuwa]	[more]

BLAST of PI0013686.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..123

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0013686	PI0013686	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0013686.1-exon	PI0013686.1-exon-chr12:17009852..17010063	exon
PI0013686.1-exon	PI0013686.1-exon-chr12:17010508..17010733	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0013686.1-cds	PI0013686.1-cds-chr12:17009852..17010063	CDS
PI0013686.1-cds	PI0013686.1-cds-chr12:17010508..17010733	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0013686.1	PI0013686.1-protein	polypeptide