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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTTCGGTATGTAATACTTTTGTTTTTGTTTTTTTTTTCATTGTGTTTAGCTAAGGTTTATTAATAATGAATAATGTTGACATTTAATGAAACCCATGTGCAAATATTAATGAATAATAATAGAGCTTCTACTTTTTAGATCTAAACAGCCAGCCCCAAAATGTGCTCATTATTCTCAACTTGTTTGTATAGGGATGTAGGTTACAACTTATACTACAAGGATTATGAACAGGGAGAAAATGAAAGATCTGTTGAAAGCTATTCCCTCAGGTAAGTTGCACTTTGAGAACAAACAAAGAAACTTCTCTAAAACAAAAACAAGCAACCAAGTTTCAATAAGGATCATTTTCAAATTATATATAGACTAATGAACTAAACATTAAATATTGTAAAATATAGCAAATTTTAGATTTTGTCAATAATAGATATTAATAATAGATTCGTGTCTATCATTGATAGAATCTAAAATTTTGTTATATTTGTAAATATTTTATGTAGTTTTGTCATTTATAATAATTAAAAAAAAAAAAAAAAAGCTATTAATAACATACTTTTGTTTTGAAAACTTGGTTAAAATTTCAAATGCTATCTCAAACTCACTTTGACTTCAACATATGCATTTCTATTCATTACCATCTTATTTTTAAGCACTCAATGCCTATACATGCATGTGTGGTGTATATATATAAAAGGTAAGGTACCATATTGATTTTCTTTAAAATGGTAATAAGGGATTATCACAATTATTCAAACTTCATTTGAGTTTATATTAGTTTTTCTTTTCCACTATGATGTCATGTAACTTATGATAAGTATGTGTATTATATTCCATTTTCAGCCCGGGTAAAAATTGGAAATGCTTGCTTCTTTTCTCCCGGGGGACTAAGGTTAAGAAAAGGTATGTATGAAGTATTTTGCCCATACTTGTTAAATATTTCAAAAAAATAATATAACAAAGCAATATAGGGGCATTCCGAGAATTGAACTCGGGACCTCTCGCACCCTAAGCGAGAATCATACCACTAGACCAAATGCCCTTTGCTGGAACCAAAAATATTCATTTATTAATTTTGTCTTCTACTGATTCAGTAAACAGAGATTGCGTTTCTAA mRNA sequence ATGTTCGGTTACAACTTATACTACAAGGATTATGAACAGGGAGAAAATGAAAGATCTGTTGAAAGCTATTCCCTCAGCCCGGGTAAAAATTGGAAATGCTTGCTTCTTTTCTCCCGGGGGACTAAGGTTAAGAAAAGTAAACAGAGATTGCGTTTCTAA Coding sequence (CDS) ATGTTCGGTTACAACTTATACTACAAGGATTATGAACAGGGAGAAAATGAAAGATCTGTTGAAAGCTATTCCCTCAGCCCGGGTAAAAATTGGAAATGCTTGCTTCTTTTCTCCCGGGGGACTAAGGTTAAGAAAAGTAAACAGAGATTGCGTTTCTAA Protein sequence MFGYNLYYKDYEQGENERSVESYSLSPGKNWKCLLLFSRGTKVKKSKQRLRF
Homology
BLAST of PI0013430.1 vs. ExPASy TrEMBL
Match: A0A1S4E0E7 (uncharacterized protein LOC103495311 OS=Cucumis melo OX=3656 GN=LOC103495311 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 5.0e-07 Identity = 32/47 (68.09%), Postives = 36/47 (76.60%), Query Frame = 0
Query: 3 GYNLYYKDYEQGENERSVESYSL---SPGKNWKCLLLFSRGTKVKKS 47
G NLY+KD EQG NERSV+SY PG+NWKCLLLF GT+VKKS
Sbjct: 103 GNNLYHKDDEQGANERSVKSYKSYYPMPGENWKCLLLFLPGTEVKKS 149
BLAST of PI0013430.1 vs. NCBI nr
Match: XP_016901689.1 (PREDICTED: uncharacterized protein LOC103495311 [Cucumis melo]) HSP 1 Score: 62.8 bits (151), Expect = 1.0e-06 Identity = 32/47 (68.09%), Postives = 36/47 (76.60%), Query Frame = 0
Query: 3 GYNLYYKDYEQGENERSVESYSL---SPGKNWKCLLLFSRGTKVKKS 47
G NLY+KD EQG NERSV+SY PG+NWKCLLLF GT+VKKS
Sbjct: 103 GNNLYHKDDEQGANERSVKSYKSYYPMPGENWKCLLLFLPGTEVKKS 149
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A1S4E0E7 | 5.0e-07 | 68.09 | uncharacterized protein LOC103495311 OS=Cucumis melo OX=3656 GN=LOC103495311 PE=... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_016901689.1 | 1.0e-06 | 68.09 | PREDICTED: uncharacterized protein LOC103495311 [Cucumis melo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Type |
|---|
| PI0013430 | PI0013430 | gene |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| PI0013430.1-exon | PI0013430.1-exon-chr01:1057883..1057889 | exon |
| PI0013430.1-exon | PI0013430.1-exon-chr01:1058084..1058153 | exon |
| PI0013430.1-exon | PI0013430.1-exon-chr01:1058722..1058781 | exon |
| PI0013430.1-exon | PI0013430.1-exon-chr01:1058973..1058994 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| PI0013430.1-cds | PI0013430.1-cds-chr01:1057883..1057889 | CDS |
| PI0013430.1-cds | PI0013430.1-cds-chr01:1058084..1058153 | CDS |
| PI0013430.1-cds | PI0013430.1-cds-chr01:1058722..1058781 | CDS |
| PI0013430.1-cds | PI0013430.1-cds-chr01:1058973..1058994 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| PI0013430.1 | PI0013430.1-protein | polypeptide |
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