PI0013000.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0013000.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	auxin-responsive protein SAUR50-like
Location	chr01: 5569599 .. 5570391 (+)
Sequence length	793
RNA-Seq Expression	PI0013000.1
Synteny	PI0013000.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCACCCCATTGCCATGGCTCCCACCTTCTTCTTCTTCTTTTTCTTCTTCTTCTTCTCTCTCTCTCTCTCTCTCTCTTAGTACAATTTCCGTGCTCTCTCCATAAATACCCAACTCTATAATCCCAATCCCTTTCCAAATCGGACCCGAAAAACTTCACCCAAAAATGGCCATTCCCAAATCCACCTCTCTCAAGCAAATCGTCAAGCGCTGCTCCAGTCTAGGCCGAAAACAAGATCCCACAGCCACTCCCCCAGCCTACGACGGCGTTCCCAAGGGACATTTCGCCGTGTATGTCGGCCAAAATCGGAGCCGATATGTCGTCCCGATCTCGCTCTTGACTCACCCCGATTTTCAATGCCTCCTCCGCCTTGCCGAGGAGGAATTCGGGTTCCGCCACCATATGGGCCTTACTATTCCTTGTGAAGAGGTGGTTTTCCTGTCACTCACCGCCGCTCTCAAATGAACCCACCACCCCCCATATTGCACACATTCCTCTTCATTTTTTTTTAAATTTTAATTTTAATTTTAGTATTTTTTTTTTACCCTTTTTTTATTTGGGTTGAATTTTTTTTTTTACCCTTTTTGGAGGGGTATTTTTTTTGGGTGGTATGATGACTACTTTTGACTTGATGAACCAAACTCCATACACTCTAAAGAAAAAAAGGGTAAAATGGGGTTTGTGTATTATTGTATAAATATTTATTACTGGCATGGCAGATTTTCCTCATAGTGGTGGAAATATTGGTTCCTTTACACACACCCTATGAGAGATGTATTCTAGATTTACAAA

mRNA sequence

CTTCACCCCATTGCCATGGCTCCCACCTTCTTCTTCTTCTTTTTCTTCTTCTTCTTCTCTCTCTCTCTCTCTCTCTCTTAGTACAATTTCCGTGCTCTCTCCATAAATACCCAACTCTATAATCCCAATCCCTTTCCAAATCGGACCCGAAAAACTTCACCCAAAAATGGCCATTCCCAAATCCACCTCTCTCAAGCAAATCGTCAAGCGCTGCTCCAGTCTAGGCCGAAAACAAGATCCCACAGCCACTCCCCCAGCCTACGACGGCGTTCCCAAGGGACATTTCGCCGTGTATGTCGGCCAAAATCGGAGCCGATATGTCGTCCCGATCTCGCTCTTGACTCACCCCGATTTTCAATGCCTCCTCCGCCTTGCCGAGGAGGAATTCGGGTTCCGCCACCATATGGGCCTTACTATTCCTTGTGAAGAGGTGGTTTTCCTGTCACTCACCGCCGCTCTCAAATGAACCCACCACCCCCCATATTGCACACATTCCTCTTCATTTTTTTTTAAATTTTAATTTTAATTTTAGTATTTTTTTTTTACCCTTTTTTTATTTGGGTTGAATTTTTTTTTTTACCCTTTTTGGAGGGGTATTTTTTTTGGGTGGTATGATGACTACTTTTGACTTGATGAACCAAACTCCATACACTCTAAAGAAAAAAAGGGTAAAATGGGGTTTGTGTATTATTGTATAAATATTTATTACTGGCATGGCAGATTTTCCTCATAGTGGTGGAAATATTGGTTCCTTTACACACACCCTATGAGAGATGTATTCTAGATTTACAAA

Coding sequence (CDS)

ATGGCCATTCCCAAATCCACCTCTCTCAAGCAAATCGTCAAGCGCTGCTCCAGTCTAGGCCGAAAACAAGATCCCACAGCCACTCCCCCAGCCTACGACGGCGTTCCCAAGGGACATTTCGCCGTGTATGTCGGCCAAAATCGGAGCCGATATGTCGTCCCGATCTCGCTCTTGACTCACCCCGATTTTCAATGCCTCCTCCGCCTTGCCGAGGAGGAATTCGGGTTCCGCCACCATATGGGCCTTACTATTCCTTGTGAAGAGGTGGTTTTCCTGTCACTCACCGCCGCTCTCAAATGA

Protein sequence

MAIPKSTSLKQIVKRCSSLGRKQDPTATPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFLSLTAALK

Homology

[Close]

BLAST of PI0013000.1 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.9e-28
Identity = 67/110 (60.91%), Postives = 79/110 (71.82%), Query Frame = 0


Query: 1   MAIPKSTS-------LKQIVKRCSSLGRKQ----DPTATPPAYDGVPKGHFAVYVGQNRS 60
           MAI K TS       LKQI+KRCSSLG+K     D    P     VPKGHF VYVG+NRS
Sbjct: 1   MAIMKKTSKLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPL---DVPKGHFPVYVGENRS 60

Query: 61  RYVVPISLLTHPDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFLSLTAALK 100
           RY+VPIS LTHP+FQ LL+ AEEEFGF H MGLTIPC+E+VF +LT+ ++
Sbjct: 61  RYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of PI0013000.1 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 9.7e-25
Identity = 58/100 (58.00%), Postives = 69/100 (69.00%), Query Frame = 0


Query: 5   KSTSLKQIVKRCSSLGRKQDPTA-----TPPAYDGVPKGHFAVYVGQNRSRYVVPISLLT 64
           ++ S+KQIVKRCSSL + ++               VPKGHF VYVG NRSRY+VPIS L 
Sbjct: 13  QAASIKQIVKRCSSLRKMKNVNGCYYNQEDDLPQDVPKGHFPVYVGPNRSRYIVPISWLH 72

Query: 65  HPDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFLSLTAALK 100
           H +FQ LLRLAEEEFGF H MGLTIPC+EV F SL +  +
Sbjct: 73  HSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLISMFR 112

[Close]

BLAST of PI0013000.1 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 3.7e-24
Identity = 50/89 (56.18%), Postives = 67/89 (75.28%), Query Frame = 0


Query: 5  KSTSLKQIVKRCSSLGRKQDPTATPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTHPDFQ 64
          ++ ++K+I+K+CSS G+  D +  P   + VPKGHF VYVG+ R+RY+VPIS L HP FQ
Sbjct: 12 QALAIKKIIKKCSSFGKNNDDSGLP---NDVPKGHFVVYVGERRNRYIVPISCLDHPTFQ 71

Query: 65 CLLRLAEEEFGFRHHMGLTIPCEEVVFLS 94
           LL+ +EEEFGF H MG+ IPC+EV FLS
Sbjct: 72 DLLQRSEEEFGFNHDMGIIIPCQEVDFLS 97

[Close]

BLAST of PI0013000.1 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 7.0e-15
Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 0


Query: 17  SSLGRKQDPTATPPAYDGVPKGHFAVYVGQN-RSRYVVPISLLTHPDFQCLLRLAEEEFG 76
           S LG K+  + +  A    PKG  AVYVG++ + RY+VP+S L+ P FQ LL  +EEEFG
Sbjct: 6   SLLGAKKILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFG 65

Query: 77  FRHHM-GLTIPCEEVVFLSLTAALK 100
           F H M GLTIPC E  F+++T+ L+
Sbjct: 66  FAHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of PI0013000.1 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.2e-14
Identity = 41/85 (48.24%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 17  SSLGRKQDPTATPPAYDGVPKGHFAVYVGQN-RSRYVVPISLLTHPDFQCLLRLAEEEFG 76
           S LG K+  + +  A    PKG  AVYVG++ + RY+VP+S L  P FQ LL  +E+EFG
Sbjct: 6   SLLGAKKILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFG 65

Query: 77  FRHHM-GLTIPCEEVVFLSLTAALK 100
           F H M GLTIPC E  F+++T+ L+
Sbjct: 66  FDHPMGGLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of PI0013000.1 vs. ExPASy TrEMBL
Match: A0A0A0K5S8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008430 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.3e-48
Identity = 96/99 (96.97%), Postives = 97/99 (97.98%), Query Frame = 0


Query: 1   MAIPKSTSLKQIVKRCSSLGRKQDPTATPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60
           MAIPK T+LKQIVKRCSSLGRKQDPTATPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH
Sbjct: 1   MAIPKPTALKQIVKRCSSLGRKQDPTATPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60

Query: 61  PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFLSLTAALK 100
           PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVF SLTAALK
Sbjct: 61  PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 99

[Close]

BLAST of PI0013000.1 vs. ExPASy TrEMBL
Match: A0A1S3BJD0 (auxin-induced protein 15A OS=Cucumis melo OX=3656 GN=LOC103490328 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.3e-48
Identity = 96/99 (96.97%), Postives = 97/99 (97.98%), Query Frame = 0


Query: 1   MAIPKSTSLKQIVKRCSSLGRKQDPTATPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60
           MAIPK TSLKQIVKRCSSLGRKQDPT+TPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH
Sbjct: 1   MAIPKPTSLKQIVKRCSSLGRKQDPTSTPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60

Query: 61  PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFLSLTAALK 100
           PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVF SLTAALK
Sbjct: 61  PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 99

[Close]

BLAST of PI0013000.1 vs. ExPASy TrEMBL
Match: A0A6J1I2G2 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111468411 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.6e-43
Identity = 89/99 (89.90%), Postives = 90/99 (90.91%), Query Frame = 0


Query: 1   MAIPKSTSLKQIVKRCSSLGRKQDPTATPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60
           M IPK  +LK IVKRCSSLGRKQD TAT  AYDGVPKGHFAVYVGQNRSRYVVPISLLTH
Sbjct: 1   MPIPKPAALKHIVKRCSSLGRKQDATATATAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60

Query: 61  PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFLSLTAALK 100
           PDFQCLLRLAEEEFGF HHMGLTIPCEEVVF SLTAALK
Sbjct: 61  PDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 99

[Close]

BLAST of PI0013000.1 vs. ExPASy TrEMBL
Match: A0A6J1GME7 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111455291 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.4e-42
Identity = 87/99 (87.88%), Postives = 89/99 (89.90%), Query Frame = 0


Query: 1   MAIPKSTSLKQIVKRCSSLGRKQDPTATPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60
           M IPK  +LK IVKRCSSLGRKQD  AT  AYDGVPKGHFAVYVG+NRSRYVVPISLLTH
Sbjct: 1   MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTH 60

Query: 61  PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFLSLTAALK 100
           PDFQCLLRLAEEEFGF HHMGLTIPCEEVVF SLTAALK
Sbjct: 61  PDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 99

[Close]

BLAST of PI0013000.1 vs. ExPASy TrEMBL
Match: A0A6J1JNJ6 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111486307 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 8.8e-37
Identity = 83/106 (78.30%), Postives = 88/106 (83.02%), Query Frame = 0


Query: 1   MAIPK----STSLKQIVKRCSSLGRKQDPTATPPA---YDGVPKGHFAVYVGQNRSRYVV 60
           MAI K    + +LKQIVKRCSSLGRKQ+      A   +D VPKGHFAVYVG+NRSRYVV
Sbjct: 1   MAIRKPAIHTAALKQIVKRCSSLGRKQEAAVAATATAGFDDVPKGHFAVYVGENRSRYVV 60

Query: 61  PISLLTHPDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFLSLTAALK 100
           PISLLTHPDFQCLLRLAEEEFGF HHMGLTIPCEEVVF SLTAALK
Sbjct: 61  PISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 106

[Close]

BLAST of PI0013000.1 vs. NCBI nr
Match: XP_008448019.1 (PREDICTED: auxin-induced protein 15A [Cucumis melo])

HSP 1 Score: 201.8 bits (512), Expect = 2.7e-48
Identity = 96/99 (96.97%), Postives = 97/99 (97.98%), Query Frame = 0


Query: 1   MAIPKSTSLKQIVKRCSSLGRKQDPTATPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60
           MAIPK TSLKQIVKRCSSLGRKQDPT+TPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH
Sbjct: 1   MAIPKPTSLKQIVKRCSSLGRKQDPTSTPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60

Query: 61  PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFLSLTAALK 100
           PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVF SLTAALK
Sbjct: 61  PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 99

[Close]

BLAST of PI0013000.1 vs. NCBI nr
Match: XP_004144828.1 (auxin-responsive protein SAUR50 [Cucumis sativus])

HSP 1 Score: 201.8 bits (512), Expect = 2.7e-48
Identity = 96/99 (96.97%), Postives = 97/99 (97.98%), Query Frame = 0


Query: 1   MAIPKSTSLKQIVKRCSSLGRKQDPTATPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60
           MAIPK T+LKQIVKRCSSLGRKQDPTATPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH
Sbjct: 1   MAIPKPTALKQIVKRCSSLGRKQDPTATPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60

Query: 61  PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFLSLTAALK 100
           PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVF SLTAALK
Sbjct: 61  PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 99

[Close]

BLAST of PI0013000.1 vs. NCBI nr
Match: KAE8645655.1 (hypothetical protein Csa_020544 [Cucumis sativus])

HSP 1 Score: 185.7 bits (470), Expect = 2.0e-43
Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 0


Query: 1  MAIPKSTSLKQIVKRCSSLGRKQDPTATPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60
          MAIPK T+LKQIVKRCSSLGRKQDPTATPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH
Sbjct: 1  MAIPKPTALKQIVKRCSSLGRKQDPTATPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60

Query: 61 PDFQCLLRLAEEEFGFRHHMGLTIPCEE 89
          PDFQCLLRLAEEEFGFRHHMGLTIPCEE
Sbjct: 61 PDFQCLLRLAEEEFGFRHHMGLTIPCEE 88

[Close]

BLAST of PI0013000.1 vs. NCBI nr
Match: XP_022969389.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima] >XP_022975693.1 auxin-responsive protein SAUR50-like [Cucurbita maxima])

HSP 1 Score: 184.9 bits (468), Expect = 3.4e-43
Identity = 89/99 (89.90%), Postives = 90/99 (90.91%), Query Frame = 0


Query: 1   MAIPKSTSLKQIVKRCSSLGRKQDPTATPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60
           M IPK  +LK IVKRCSSLGRKQD TAT  AYDGVPKGHFAVYVGQNRSRYVVPISLLTH
Sbjct: 1   MPIPKPAALKHIVKRCSSLGRKQDATATATAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60

Query: 61  PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFLSLTAALK 100
           PDFQCLLRLAEEEFGF HHMGLTIPCEEVVF SLTAALK
Sbjct: 61  PDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 99

[Close]

BLAST of PI0013000.1 vs. NCBI nr
Match: XP_038887253.1 (auxin-responsive protein SAUR50-like [Benincasa hispida])

HSP 1 Score: 184.1 bits (466), Expect = 5.8e-43
Identity = 90/100 (90.00%), Postives = 92/100 (92.00%), Query Frame = 0


Query: 1   MAIPKSTSLKQIVKRCSSLGRKQDPT-ATPPAYDGVPKGHFAVYVGQNRSRYVVPISLLT 60
           MAIPK  +LKQIVKRCSSLGRKQD T A  PAYDGVPKGHFAVYVG+NRSRYVVPISLLT
Sbjct: 1   MAIPKPATLKQIVKRCSSLGRKQDATAAAAPAYDGVPKGHFAVYVGENRSRYVVPISLLT 60

Query: 61  HPDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFLSLTAALK 100
           HPDFQCLLRLAEEEFGF HHMGLTIPCEEVVF SLTAALK
Sbjct: 61  HPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 100

[Close]

BLAST of PI0013000.1 vs. TAIR 10
Match: AT4G36110.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 127.1 bits (318), Expect = 7.9e-30
Identity = 62/98 (63.27%), Postives = 75/98 (76.53%), Query Frame = 0


Query: 2   AIPKSTSLKQIVKRCSSLGRKQDPTATPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTHP 61
           A+ ++ SLKQI+KRCSSLG+K         ++ VPKGHF VYVGQ+RSRYVVPIS L H 
Sbjct: 10  ALSQAASLKQILKRCSSLGKKNQGNC---YFNDVPKGHFPVYVGQHRSRYVVPISWLDHH 69

Query: 62  DFQCLLRLAEEEFGFRHHMGLTIPCEEVVFLSLTAALK 100
           +FQ LL+LAEEEFGF H MGLTIPC+EVVF SL +  +
Sbjct: 70  EFQSLLQLAEEEFGFEHEMGLTIPCDEVVFRSLISMFR 104

[Close]

BLAST of PI0013000.1 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 126.3 bits (316), Expect = 1.3e-29
Identity = 67/110 (60.91%), Postives = 79/110 (71.82%), Query Frame = 0


Query: 1   MAIPKSTS-------LKQIVKRCSSLGRKQ----DPTATPPAYDGVPKGHFAVYVGQNRS 60
           MAI K TS       LKQI+KRCSSLG+K     D    P     VPKGHF VYVG+NRS
Sbjct: 1   MAIMKKTSKLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPL---DVPKGHFPVYVGENRS 60

Query: 61  RYVVPISLLTHPDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFLSLTAALK 100
           RY+VPIS LTHP+FQ LL+ AEEEFGF H MGLTIPC+E+VF +LT+ ++
Sbjct: 61  RYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of PI0013000.1 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 125.9 bits (315), Expect = 1.7e-29
Identity = 64/103 (62.14%), Postives = 76/103 (73.79%), Query Frame = 0


Query: 3   IPKSTSLKQIVKRCSSLGRKQ------DPTATPPAYDGVPKGHFAVYVGQNRSRYVVPIS 62
           + ++  +KQI+KRCSSLG+KQ      D   +P     VPKGHF VYVG+NR RYVVPIS
Sbjct: 9   LTQTAMIKQILKRCSSLGKKQSNVYGEDENGSPL---NVPKGHFVVYVGENRVRYVVPIS 68

Query: 63  LLTHPDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFLSLTAALK 100
            LT P+FQ LL+ AEEEFGF H MGLTIPCEEVVF SLT+ L+
Sbjct: 69  FLTRPEFQLLLQQAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 108

[Close]

BLAST of PI0013000.1 vs. TAIR 10
Match: AT4G38860.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 124.8 bits (312), Expect = 3.9e-29
Identity = 64/100 (64.00%), Postives = 77/100 (77.00%), Query Frame = 0


Query: 3   IPKSTSLKQIVKRCSSLGRKQ--DPTATPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 62
           + ++  LKQI+KRCSSLG+KQ  D    P     VPKGHF VYVG+ R+RY+VPIS LTH
Sbjct: 9   LTQTAMLKQILKRCSSLGKKQCYDEEGLPL---DVPKGHFPVYVGEKRTRYIVPISFLTH 68

Query: 63  PDFQCLLRLAEEEFGFRHHM-GLTIPCEEVVFLSLTAALK 100
           P+F  LL+ AEEEFGFRH M GLTIPCEEVVFLSLT+ ++
Sbjct: 69  PEFLILLQQAEEEFGFRHDMGGLTIPCEEVVFLSLTSMIR 105

[Close]

BLAST of PI0013000.1 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 121.3 bits (303), Expect = 4.3e-28
Identity = 61/98 (62.24%), Postives = 72/98 (73.47%), Query Frame = 0


Query: 3   IPKSTSLKQIVKRCSSLGRKQ--DPTATPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 62
           + ++  LKQI+KRCSSL + Q  D    P     VPKGHF VYVG+ RSRY+VPIS LTH
Sbjct: 9   LTQTAMLKQILKRCSSLAKNQCYDEDGLPV---DVPKGHFPVYVGEKRSRYIVPISFLTH 68

Query: 63  PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFLSLTAAL 99
           P F+ LL+ AEEEFGF H MGLTIPCEEVVF SLT+ +
Sbjct: 69  PKFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSLTSMI 103

The following BLAST results are available for this feature:

BLAST of PI0013000.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	1.9e-28	60.91	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
Q9SL45	9.7e-25	58.00	Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1...	[more]
P0DKL1	3.7e-24	56.18	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
Q9FJG1	7.0e-15	49.41	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]
Q9FJF7	1.2e-14	48.24	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]

BLAST of PI0013000.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5S8	1.3e-48	96.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008430 PE=3 SV=1	[more]
A0A1S3BJD0	1.3e-48	96.97	auxin-induced protein 15A OS=Cucumis melo OX=3656 GN=LOC103490328 PE=3 SV=1	[more]
A0A6J1I2G2	1.6e-43	89.90	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111468411...	[more]
A0A6J1GME7	1.4e-42	87.88	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114552...	[more]
A0A6J1JNJ6	8.8e-37	78.30	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111486307...	[more]

BLAST of PI0013000.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448019.1	2.7e-48	96.97	PREDICTED: auxin-induced protein 15A [Cucumis melo]	[more]
XP_004144828.1	2.7e-48	96.97	auxin-responsive protein SAUR50 [Cucumis sativus]	[more]
KAE8645655.1	2.0e-43	97.73	hypothetical protein Csa_020544 [Cucumis sativus]	[more]
XP_022969389.1	3.4e-43	89.90	auxin-responsive protein SAUR50-like [Cucurbita maxima] >XP_022975693.1 auxin-re...	[more]
XP_038887253.1	5.8e-43	90.00	auxin-responsive protein SAUR50-like [Benincasa hispida]	[more]

BLAST of PI0013000.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36110.1	7.9e-30	63.27	SAUR-like auxin-responsive protein family	[more]
AT4G34760.1	1.3e-29	60.91	SAUR-like auxin-responsive protein family	[more]
AT1G75580.1	1.7e-29	62.14	SAUR-like auxin-responsive protein family	[more]
AT4G38860.1	3.9e-29	64.00	SAUR-like auxin-responsive protein family	[more]
AT2G21220.1	4.3e-28	62.24	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 11..97 e-value: 1.8E-26 score: 92.2
None	No IPR available	PANTHER	PTHR31374:SF311	SMALL AUXIN-UP RNA-RELATED	coord: 3..98
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 3..98

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0013000	PI0013000	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0013000.1-five_prime_utr	PI0013000.1-five_prime_utr-chr01:5569599..5569764	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0013000.1-exon	PI0013000.1-exon-chr01:5569599..5570391	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0013000.1-cds	PI0013000.1-cds-chr01:5569765..5570064	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0013000.1-three_prime_utr	PI0013000.1-three_prime_utr-chr01:5570065..5570391	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0013000.1	PI0013000.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin