PI0012394.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0012394.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	stress-induced protein KIN2-like
Location	chr09: 20480452 .. 20481236 (-)
Sequence length	494
RNA-Seq Expression	PI0012394.1
Synteny	PI0012394.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATCTTTCTTCCTGTTTTTGTGTTTTTGAAATTCTTCACTAAACAATATGGATAACTCCCAAAAGATGAGCTATCATGCTGGAGAAGCCAAAGGTCGAACTCAGGTATTTATATCTACGAATATCATTACATCCGTATAATCTAATAAATCTTGTTTAATAAGTTTGTTTTGTGTGTTATTTCTTAATTTTAATCAAGGATTAAAATATCAATATCATGCTTAAATAGATGACATATATTGTCTTTTATGAGCATTTATAAAAAAAGTTAGAAATATCGAAATTCAACTCTTGGATTATGTTTACGAATGTATCCATGGATGTTTGAATCCCTTCCTTTTAACTCATGCTTGATTTTCGTTGTGTTTTTGTTAATTGTGGCATTTCCTTATGTAGGAGAAGGTGAGCAACATGATGGACAAGGCAAACAATGCAGCTGAATCAGCTAAGGAATCAGTGCATGAAGCAGGACAACAAATAATGGCTAAAGCACAAGGAGCAGCTGATGCTGTTAAAGATGCAGTTAACAAATGAAGCAACGTCGATTGAATAATTTGCTCGTTTTCTTTTTTTTTGTTTCTTCAATGCCTCTCTTTAATTTTGTTTTTGCTTAGTCATTTTTTTTCATCTCTCTTAAACAAAGCTTGTATTGTTGAAGAGACATGAAAATATATATGAAAAAAACTCTCATATGGCTCATGACCCTTTTTTTCCTTCCTTAAGAATTATGGCTATAGTTGACATGTGGCCAAAAATATATCCTTACTAATTGACATTCATTTAAAA

mRNA sequence

GATCTTTCTTCCTGTTTTTGTGTTTTTGAAATTCTTCACTAAACAATATGGATAACTCCCAAAAGATGAGCTATCATGCTGGAGAAGCCAAAGGTCGAACTCAGGAGAAGGTGAGCAACATGATGGACAAGGCAAACAATGCAGCTGAATCAGCTAAGGAATCAGTGCATGAAGCAGGACAACAAATAATGGCTAAAGCACAAGGAGCAGCTGATGCTGTTAAAGATGCAGTTAACAAATGAAGCAACGTCGATTGAATAATTTGCTCGTTTTCTTTTTTTTTGTTTCTTCAATGCCTCTCTTTAATTTTGTTTTTGCTTAGTCATTTTTTTTCATCTCTCTTAAACAAAGCTTGTATTGTTGAAGAGACATGAAAATATATATGAAAAAAACTCTCATATGGCTCATGACCCTTTTTTTCCTTCCTTAAGAATTATGGCTATAGTTGACATGTGGCCAAAAATATATCCTTACTAATTGACATTCATTTAAAA

Coding sequence (CDS)

ATGGATAACTCCCAAAAGATGAGCTATCATGCTGGAGAAGCCAAAGGTCGAACTCAGGAGAAGGTGAGCAACATGATGGACAAGGCAAACAATGCAGCTGAATCAGCTAAGGAATCAGTGCATGAAGCAGGACAACAAATAATGGCTAAAGCACAAGGAGCAGCTGATGCTGTTAAAGATGCAGTTAACAAATGA

Protein sequence

MDNSQKMSYHAGEAKGRTQEKVSNMMDKANNAAESAKESVHEAGQQIMAKAQGAADAVKDAVNK

Homology

[Close]

BLAST of PI0012394.1 vs. ExPASy TrEMBL
Match: A0A5D3BPC0 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002090 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.8e-20
Identity = 57/64 (89.06%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 1  MDNSQKMSYHAGEAKGRTQEKVSNMMDKANNAAESAKESVHEAGQQIMAKAQGAADAVKD 60
          MDNSQKMSYHAGEAKG+TQEKVSNMMDKA+NAA+S KESV EAGQQ+MAKAQGA DAVKD
Sbjct: 1  MDNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKD 60

Query: 61 AVNK 65
          AVNK
Sbjct: 61 AVNK 64

[Close]

BLAST of PI0012394.1 vs. ExPASy TrEMBL
Match: A0A1S3CA67 (stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103498580 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.8e-20
Identity = 57/64 (89.06%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 1  MDNSQKMSYHAGEAKGRTQEKVSNMMDKANNAAESAKESVHEAGQQIMAKAQGAADAVKD 60
          MDNSQKMSYHAGEAKG+TQEKVSNMMDKA+NAA+S KESV EAGQQ+MAKAQGA DAVKD
Sbjct: 1  MDNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKD 60

Query: 61 AVNK 65
          AVNK
Sbjct: 61 AVNK 64

[Close]

BLAST of PI0012394.1 vs. ExPASy TrEMBL
Match: A0A5D3BLF3 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002100 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.1e-19
Identity = 55/63 (87.30%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 2  DNSQKMSYHAGEAKGRTQEKVSNMMDKANNAAESAKESVHEAGQQIMAKAQGAADAVKDA 61
          DNSQKMSY+AGEAKG+TQEK SNMMDKA+NAAESAKES+ E+GQQ+MAKAQGAADAVKDA
Sbjct: 3  DNSQKMSYNAGEAKGQTQEKASNMMDKASNAAESAKESIQESGQQMMAKAQGAADAVKDA 62

Query: 62 VNK 65
          VNK
Sbjct: 63 VNK 65

[Close]

BLAST of PI0012394.1 vs. ExPASy TrEMBL
Match: A0A0A0KXN2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643250 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.1e-19
Identity = 55/63 (87.30%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 2  DNSQKMSYHAGEAKGRTQEKVSNMMDKANNAAESAKESVHEAGQQIMAKAQGAADAVKDA 61
          DNSQKMSYHAGEAKG+TQEK+SNMMDKA++AA+SAKESV E GQQ+MAKAQGAADAVKDA
Sbjct: 3  DNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVKDA 62

Query: 62 VNK 65
          VNK
Sbjct: 63 VNK 65

[Close]

BLAST of PI0012394.1 vs. ExPASy TrEMBL
Match: A0A1S3CAQ3 (stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103498581 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.1e-19
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 2  DNSQKMSYHAGEAKGRTQEKVSNMMDKANNAAESAKESVHEAGQQIMAKAQGAADAVKDA 61
          DNSQKMSY+AGEAKG+TQEKVSNMMDKA+NAAESAKES  E GQQIMAKA+GAADAVKDA
Sbjct: 3  DNSQKMSYNAGEAKGQTQEKVSNMMDKASNAAESAKESAQETGQQIMAKAEGAADAVKDA 62

Query: 62 VNK 65
          VNK
Sbjct: 63 VNK 65

[Close]

BLAST of PI0012394.1 vs. NCBI nr
Match: XP_008459449.1 (PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0039404.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa] >TYK00592.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa])

HSP 1 Score: 107.1 bits (266), Expect = 5.8e-20
Identity = 57/64 (89.06%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 1  MDNSQKMSYHAGEAKGRTQEKVSNMMDKANNAAESAKESVHEAGQQIMAKAQGAADAVKD 60
          MDNSQKMSYHAGEAKG+TQEKVSNMMDKA+NAA+S KESV EAGQQ+MAKAQGA DAVKD
Sbjct: 1  MDNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKD 60

Query: 61 AVNK 65
          AVNK
Sbjct: 61 AVNK 64

[Close]

BLAST of PI0012394.1 vs. NCBI nr
Match: XP_038891080.1 (late embryogenesis abundant protein 2-like [Benincasa hispida])

HSP 1 Score: 104.4 bits (259), Expect = 3.8e-19
Identity = 54/64 (84.38%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 1  MDNSQKMSYHAGEAKGRTQEKVSNMMDKANNAAESAKESVHEAGQQIMAKAQGAADAVKD 60
          MDNSQKMSYHAGEAKG+TQEKVSNMMDKA++AA+SAKES+ EAGQQ+ AKAQGA DAVKD
Sbjct: 1  MDNSQKMSYHAGEAKGQTQEKVSNMMDKASDAAQSAKESIQEAGQQVKAKAQGATDAVKD 60

Query: 61 AVNK 65
          A+NK
Sbjct: 61 AINK 64

[Close]

BLAST of PI0012394.1 vs. NCBI nr
Match: XP_004141485.1 (late embryogenesis abundant protein 2 [Cucumis sativus] >KGN52546.1 hypothetical protein Csa_008504 [Cucumis sativus])

HSP 1 Score: 103.2 bits (256), Expect = 8.4e-19
Identity = 55/63 (87.30%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 2  DNSQKMSYHAGEAKGRTQEKVSNMMDKANNAAESAKESVHEAGQQIMAKAQGAADAVKDA 61
          DNSQKMSYHAGEAKG+TQEK+SNMMDKA++AA+SAKESV E GQQ+MAKAQGAADAVKDA
Sbjct: 3  DNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVKDA 62

Query: 62 VNK 65
          VNK
Sbjct: 63 VNK 65

[Close]

BLAST of PI0012394.1 vs. NCBI nr
Match: XP_008459450.1 (PREDICTED: stress-induced protein KIN2-like [Cucumis melo])

HSP 1 Score: 103.2 bits (256), Expect = 8.4e-19
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 2  DNSQKMSYHAGEAKGRTQEKVSNMMDKANNAAESAKESVHEAGQQIMAKAQGAADAVKDA 61
          DNSQKMSY+AGEAKG+TQEKVSNMMDKA+NAAESAKES  E GQQIMAKA+GAADAVKDA
Sbjct: 3  DNSQKMSYNAGEAKGQTQEKVSNMMDKASNAAESAKESAQETGQQIMAKAEGAADAVKDA 62

Query: 62 VNK 65
          VNK
Sbjct: 63 VNK 65

[Close]

BLAST of PI0012394.1 vs. NCBI nr
Match: TYK00593.1 (stress-induced protein KIN2-like [Cucumis melo var. makuwa])

HSP 1 Score: 103.2 bits (256), Expect = 8.4e-19
Identity = 55/63 (87.30%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 2  DNSQKMSYHAGEAKGRTQEKVSNMMDKANNAAESAKESVHEAGQQIMAKAQGAADAVKDA 61
          DNSQKMSY+AGEAKG+TQEK SNMMDKA+NAAESAKES+ E+GQQ+MAKAQGAADAVKDA
Sbjct: 3  DNSQKMSYNAGEAKGQTQEKASNMMDKASNAAESAKESIQESGQQMMAKAQGAADAVKDA 62

Query: 62 VNK 65
          VNK
Sbjct: 63 VNK 65

[Close]

BLAST of PI0012394.1 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 75.5 bits (184), Expect = 1.8e-14
Identity = 37/59 (62.71%), Postives = 52/59 (88.14%), Query Frame = 0


Query: 2  DNSQKMSYHAGEAKGRTQEKVSNMMDKANNAAESAKESVHEAGQQIMAKAQGAADAVKD 61
          +NSQ MS++AG+AKG+TQEK SN++DKA+NAA+SAKES+ E GQQ+  KAQGA++ +K+
Sbjct: 3  NNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIKE 61

[Close]

BLAST of PI0012394.1 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 74.3 bits (181), Expect = 3.9e-14
Identity = 40/59 (67.80%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 3  NSQKMSYHAGEAKGRTQEKVSNMMDKANNAAESAKESVHEAGQQIMAKAQGAADAVKDA 62
          NSQ +S+ AG+AKG+TQEK S MMDKA+NAA+SAKES+ E GQQI  KAQGA ++VK+A
Sbjct: 4  NSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVKNA 62

[Close]

BLAST of PI0012394.1 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 67.8 bits (164), Expect = 3.7e-12
Identity = 36/60 (60.00%), Postives = 45/60 (75.00%), Query Frame = 0


Query: 1  MDNSQKMSYHAGEAKGRTQEKVSNMMDKANNAAESAKESVHEAGQQIMAKAQGAADAVKD 60
          MDN Q  SY AG+A G+T+EK   MMDKA +AA SA++S+ + GQQ+  KAQGAAD VKD
Sbjct: 1  MDNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKD 60

The following BLAST results are available for this feature:

BLAST of PI0012394.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0012394.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BPC0	2.8e-20	89.06	Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CA67	2.8e-20	89.06	stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103498580 PE=4 SV...	[more]
A0A5D3BLF3	4.1e-19	87.30	Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A0A0KXN2	4.1e-19	87.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643250 PE=4 SV=1	[more]
A0A1S3CAQ3	4.1e-19	88.89	stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103498581 PE=4 SV...	[more]

BLAST of PI0012394.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459449.1	5.8e-20	89.06	PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0039404.1 stress-...	[more]
XP_038891080.1	3.8e-19	84.38	late embryogenesis abundant protein 2-like [Benincasa hispida]	[more]
XP_004141485.1	8.4e-19	87.30	late embryogenesis abundant protein 2 [Cucumis sativus] >KGN52546.1 hypothetical...	[more]
XP_008459450.1	8.4e-19	88.89	PREDICTED: stress-induced protein KIN2-like [Cucumis melo]	[more]
TYK00593.1	8.4e-19	87.30	stress-induced protein KIN2-like [Cucumis melo var. makuwa]	[more]

BLAST of PI0012394.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53820.1	1.8e-14	62.71	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G38760.1	3.9e-14	67.80	Late embryogenesis abundant protein (LEA) family protein	[more]
AT3G02480.1	3.7e-12	60.00	Late embryogenesis abundant protein (LEA) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 19..46
None	No IPR available	GENE3D	6.10.140.1430		coord: 3..64 e-value: 1.6E-5 score: 27.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR34191:SF4	LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN	coord: 1..64
IPR039624	Stress-induced protein KIN1/KIN2	PANTHER	PTHR34191	LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN	coord: 1..64

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0012394	PI0012394	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0012394.1-exon	PI0012394.1-exon-chr09:20480452..20480841	exon
PI0012394.1-exon	PI0012394.1-exon-chr09:20481133..20481236	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0012394.1-three_prime_utr	PI0012394.1-three_prime_utr-chr09:20480452..20480703	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0012394.1-cds	PI0012394.1-cds-chr09:20480704..20480841	CDS
PI0012394.1-cds	PI0012394.1-cds-chr09:20481133..20481189	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0012394.1-five_prime_utr	PI0012394.1-five_prime_utr-chr09:20481190..20481236	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0012394.1	PI0012394.1-protein	polypeptide