PI0011516.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0011516.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RNA-binding KH domain-containing protein PEPPER
Location	chr05: 6002227 .. 6010501 (+)
Sequence length	1902
RNA-Seq Expression	PI0011516.1
Synteny	PI0011516.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAACAAGAACAACGCAATTGCCAAATTTCCCTTTTTCTCTTCGTTCGTTTTCTTAAAACCTCTGTGAGTCATAACCCTAACTTCTCTCATTCTTCATCTTCCTCCTCGATGGCCACCAACACAACTACAGAGAATGGCTCCACTGATGCTATTGCCAACCCTCAAAGCTCCACACTTCCCTCTCTAGCTGCTGCAGAACCGGACTCTACAGAAGCCGGTGATGATGATTCCGACATCGATCCTTCTAACCAAGACTACTTATCTGTTCCTCCTTCCGATTCTGCAGTTCATGAACCATCCAATCATACCGGCGCTTCCGATAAAAAGTGGCCCGGATGGCCCGGCGACTGCGTCTTCCGCCTTATTGTGCCCGTTGTTAAAGTTGGCAGCATTATTGGGCGCAAGGGGGATCTTATCAAGAAGATGTGTGAAGAAACTAGGGCTAGAATTCGTGTTCTTGATGGTGCTGTTGGCACTCCTGATCGCGTTGTGAGTGTTTTTCTAATCTCAGCTATTTTTTGGTAGTTGTTCGTTTTATAGTAGTAAAGATTCTTTGTTACTCATGGTTGCATAGGGACGATGAGTTGAATCTTATATTGGGTTATTTTGTTATGTTTGGTTCCAGTTCCACATCCACTACGTGGTTTTGTTAGAGGACTGTCTTGCTAGTTATTTGTTTAGTCTAGGCATCTTTATGTGTTCCTTGATGGATAATTAGACTGGATGTTATGATTTTTAGTTAAAAAATATCTCCTTTTCGAGCCTCCTGAGGCTTACAGGGAAAAAAGAAAAAAAGAAAAAAGAATTCTCCCGTCGTTGGCCGATCGCGTTATTGTGCCCGTTGATTCATGCTAGTTTGTCATAAGAAGTTATTTTTTATTTCTTTCACCCGAGCTGAGCCGCTGAATTGCTGTCTGATATTAGGTTAACTAGTAGTATAGATGGAACTTTTTGGGTATGAAAAGGAGCTTCTGTTAAACCTTGTTTTGGTTGTTTAGAATTGAGGCTTGATCTATGATGGAGGAGGAGGTGCTTTGAATTCTTCCTTTAGGGAGAAGGGGATATTGTAGCGGCGTGCTAGTTTGCAATTTTGTGGGCATTTAGCTTGAGGGGGATAATAGAATCGGTAGAGTGGTGGGGAAAAATTTGGGAGATGGCTATATTTATTGCCTCCTTGTGCGTGTCTTTCACTAAGCCATTTTTTTCCAAATAATTATGAGCTTGATTTCGTTATGTTGGATTGGAGTCCTTTTTAATGGTTAGGATCAAACTCCTTTTTTGTTGGAGTTTGTTTTTGTGTGTGCTTATATATTTTAAAAAAAAATTGAAGCTTGATCGTCTTTTCTTTGCTAATTTTATTTTGCAGTATATATATATATATATAGTCCCAGTAACTCGGTGGTATAAGCCTCTGATAACCCAAAGTAGGCACAGTGGATAAGCCTCTGTTTTCCTTTTCCATGGGAAAAAAAACACTTAGAGGCAAAGTATGACAGTAATCTGATTTTTAGAAGTTTTGCTTTTTTATAGGCTGTTCTTAACTTCATTTTGTTTACTTCCTATCCCAAATAAAAACTTCATTTTGTTTACTGAGCAGGCACTTCCTGATTGTCTGTGAATTTTAGAAGGTGGTGATTATGTACTTGGTTTATTTAGAAAATGCACTTTGTACTTTGAGGAGTGCCCAAATAATTGTGATTAGGTTCAATAAAAAACTGTAATATATCAAAGAGATGCATTACTTTTCCTTTTAGGAGGCTGTTGCAGTTACCCTTTAATTCTTTGATTCTTCATTTTGATTTGCAAGAAAACTTGGATGCATTTTCAGACAATATCTTTTAAGTAGGAGATCTTGATCAAACTTGTTCTTTCAGTTTTTAAAGTTTAGAGTTTACTTCAGGTGTTGATATCAGGAAAAGAAGAGCTTGAGTCACCCCTTTCCCCTGCTATGGACGCAGTTATAAGAGTCTTCAAACGTGTGTCTGGATTGTCTGAGAATGAAGATGAAGCTAAAGCCTCATTTTGTTCAATTCGGCTACTGGTGGCATCAACTCAAGCAATCAATCTAATTGGAAAACAGGGTTCATTAATCAAATCTATACAGGAGAGTACAGGGGCCTCTGTAAGAGTATTATCGGGAGGTATGCTTTCATTTTCTGTTCTGCACTTGCCATACTCTTTTATTGGTTGGTTTTGAACCTAGTTGTATTATTTTCAAAGATAATGAATTATTCCAGATAGCTAAATCGTAGAGCCATAAAAAGGCTGTTATTGAGTAAAAGAAGACAAATAAGCACACCCTCCAAAACTTCATTGCAAGATTTGGATTATTTTAAAGAGTAATAATGCCCCTAATAAAGAACCAAGGGAATCAATGGAAGACCACCTTCATTATGAGTGGAAATTTGGGAAGCCCATTGCAAGATTGAAATTTCACAATTTGTGCTGTGTTAGTGTTAGAATTTATGATTCAGTGTTTGGTCCTCTTCCAATGAATTAATTAGAGTCTCTTATTTTAGAAAAATTTGATGTTCATATCTTCGGAATAAGTACTTTCTCAATTACTAGTCCGTGAAGAAAGTATCCAGGGGAATCGCCAGTGTCAATGGAGATTACATTTTTACCTTTTTCCATTGAGCTAAAGGTACCTTCCCTTTTTCCATTGAGCTAAAGACCATTGGCTTAGTTGTGGTGTTCTCTCTTTGGCCTTCCCCGTTTGTGAATAGAGTTTGAATGCCCAAAAGACTTGTTTTCATCCAAAAATGGACGTCGGCTTACTCATTTTCCTGATATCAAGGTGGCTGAGGTGTGGCTTGAGGATTCTGAGGCTTGGAATTTGCATCTTCGTTGTAATCTTAATGAATATGAAATACATGAGTGGGCTTCTTTATCTCTGTTGTTGTCCTCTATCAGCTTTCGTTTGGTGCCTGATTCATGGAGATGGATTATTTACTCCTCTTCTACATTCCCTGTGAAATCTCTCATTGATGATTTAATGGGTTCTATTGAGAGCCTATTGCACGGGATTTTTATTCTGTCATTTGGTTGGATCACTACCCTAAGAAAATCAAAAATTTCTTTTGGGAGCTTAGTCAAGGTGCCATCAATACTGCTGATCGTCTTCAACGTCGAACACCTTACATGCCTCTCTCATCTGTTTATGCATTGTCCTTTTGCGTCCCGTTTTTGGCATAATATTTTGGATGCTTTCGGGTGCTCAATTGCCTGCTCTAAAAATATTTTCGACATCCTTGACTCTCTTCTGGTGGGGCACCCCTTTGCTTAGAAAACGGCTTGGTTAGCTAGTCTTTGCGCTTTCTTTTGGACTTTGTGGGGCGAGCGTAATAAGCGTCTCTTTAACGATTCAATTTCCTCTTTTGACTCATTTTTTGATCTTGTGCTGTCTACTGCTTTTTATTGGTGCAAAATTGGGCACCCTTTTAAAAACTTTAGTATTTCTGATTTAGTTTTCAATTGGGAATCTTTTTGTAATCACCTTTAGGTGCTCTGTGTCTTCCCCCTATTCATTTATTCAATGAAATGTTTCTTATCTAAAAAAAGGTACCTTTCCTTTTTTACCATAAAAAATTCTCTTTAAAAGATATACCCCCATCTTATGGATGTTTGGTGTGTGTAGCTAACTTAATTGGAAGAGCTTAGCTTTATTCATTAACCCATTGAAAAGCCTTGCAGAAAAGGCATCTCTCGTGCTATTTTGACATGTTTGTCTCAAAGGATTAGAATTGGTAACTAAAGCAAAGAAATTTTGCTATTGGGTGGAGAATCGTTCCTCTCTATCTCTCTCTCTCTCTCTCCAAATAAACCACTGGGTAGAAGGGAGATTTATTGAAGCCTGTTATTCTCAACGAAAAGTACTCATAAAATTATCTCTCTTTTCAAATAAACCACTGGGTAGAAGGGAGATTTGTTGAAGCTTATTATTCTCAATGAAAAGTTCTCATAAAAAAATGAGATATATATATATATAATTTTAAAAATAAAAGAAAATATGAAGCCCTATTTCTTTAGACAACCTCTTAAAAAATCTTTATTTTTTTCTTAAAATTTTCATTCCCCATCATCTGTAAACTATACTTTTTCATATGGAGAAAATGTTATATATACACGCACACATATTTTATTGTGTACACCAAAAAAAGCTCTCCCTTGCCAAAAGGGCTATTACATAGTTTTTTATGCACGCTGTATATTCTTTCATTTGCTCTATGGAAGTTTGTATTTCGATAAAAAGGGATATTATATATCATTCTATTTGAAACAGTAACATAGGACAATATAATCCCCCAAACTGTCATCGGGTGTTCACTTCAATTGTCTGAGAGCTAGGGTATACAATCTAAGAAACCTTGAACAAAACTGTACAGCACGATCATCCTTTATCAATTTTGTAGACTATTTTGTATGGCTCGTGCCCTTTCCTTTAATGGGGTGTCCTTTTGTAGCCATGGTTTTTACCATTTTTGTATGTCTTTTTATTTTTTTATTTTCTTTCATTGCTTTTATATTAAAAAGAATAAAATAAAATAACAAAAGTGAACGAGTAGAAAGCTGCTACAATAGTTCAAAGGTATGGTGATAAGACACGTACTTGCCTCAATCCCTTGGATGCAGGCATGCTGCATGCTGGTGAGTTTTATCACCATAACTTTATCAAAGTTACTTCCAGAGCAAGATTTGATTCTAGAAATATGATTGCAGGTGGAATTGTAACTAAGTTTCATATAATTCTTGGGCTTATTTTTTCTCTTCTTTGAATATGAGGTTATAGGGAGATGATGTGGGTGTTCCTTCTCAATCCACCTTTTTGAGGTATGGAGAAGTTTTTGTGGAAGGAGGGTTTGTGCTATGTTGTGGACTCGTGGGGTGCGACTTCAGAGGAATAGTAGGACCTTTAGAGGGGTCGAGAGTGATCCTAGTGATGTTTAGTTCTTTGTTAGATTCTTTGTTTAATTGTTTCTCTTTGAGCATGGAGACTTTTTGAAATTATTCTTTAGGCTCTATTCTACTTTATTGGAGCCCTTCCTTTGTGGGCTTGACATTCTCTCGATGAAATTTCAGTTCTTTATCAAAATAATTAAAATCTGGGATCTGGACCCTTTAGCAGTATGAAAACTTAATGTCTGAGACTTTTCATTTAACGAGACACCTCATTTCTAACTTCATTATTATTGATGAGTAATATGAAAAAAATGGTAATGAGAATGTAAATCAACTCTTCATAATTGGAGAATGTAGTCTAGTTCATTCTCTAAGTTGAGTATTCTCTGGTCATCTTAGAGAGAAGCCAGTGGCGGATCCAGAAATTTTGCTAACCAGGGGGTTTATAGTTTAGTAAAAATAATCTTGAAAAAATGTAAAGAGTGGGGTTTGAACCTGGGGTCTAAAGTGGGCTGGAAAATAGTTCTACCACTAGGTTATATATATGTATTATACAAAGAGCATAACGCTGAGGTGGGCTTGAGCCCCAGGTCTATACTAAATCCGCCTGTGAGAGAAGCACACATATTCTGATTCACTAACATCTTTCTCTTGCTGATACATTATGAAAATGACCTAAGGGCTAAAACTAAAAGTACATGGCAATAGGTGGATACTATAACTATATAAGTATTATCTTTTATCTCGCTTATATTGATGACTACTAACTTCAAGCCTTGAGTTCAGCCAGCAGGTCCAAGTAACTACTAATGTCCTGAGATAATAATACATTGCCTCCTGTAGTCATTCGTTTATGAGTACTCTCTGAACATTCTCTTACTCATCTACATTTGATGCTTGCAGATGAGATGCCATTCTATGCTGGTGCAGACGAGAGAATGGTGGAATTGCAGGGAGAATCCTTAAAGGTTCTCAAGGCTCTAGAGGGAGTAGTGGGCCACCTAAGGAAGTTTTTAGTTGATCATAGTGTTCTTCCTCTGTTTGAAAAGAGTGTAAGTTCTTTTTTTGTTATGTCTGTGACCAACCTTCTCAAGGACTCTAATGAATTGCTGCTCTTCTTTTTTATATATAGTTTAATACACCTGCCTCACAAGATCGCCAAACGGAAACCTGGACTGACAAGTCCTCACTTCTTACTGCATCTCAAAGCTTAATCTCTTCCGAGTATCCTCCGTCTACAAAAAGAGAATCTCTATTTCTTGATCGTGAAACTCATCTTGATTCTCATATTCCATCATCTGGTATTTCTCTATATGGGCAAGATCGAGTGCTTCCTACTATTCGATCATCAGGTGTTGGCCGGTCTGGGGGACCTATTGTAACTCAGGTTGGTATATGTAGCTCATTTACTTAGTTATTGGTAGAATGAAATGGTCTATGTTGACTTAGTGAGGTAGCAAACTATCTCACCTACTGACCTACATAATCAATAAGATCGATTCCATCATTGCATGCCCACTTTTACAGTTCGGTGATTAGTTTTTGAACTCGGGTCAAGGCAAGCTAGAAGGTTGTCAACTTTACATGTCTTTCGTGCCTTTGAAACACTATGTCCAAAATGTTTGGCATATTGCATTCGAGTATTATTTAGATTTTACCATAATGCTGAATGGAGGCAGTGGCCAGTGGGAAAAGAGTAGTTACAGAGTTTGTCTCTGTAGTTTGCTATTTCTGATCAAGTTACCTCTTTGTGGCTCCTGTCAGGTTACTCAGACAATGCAGATCCCGTTATCTTATGCTGAGGATATCATTGGGGTTGGAGGAACAAATATTGCATTCATCCGTCGTAATAGTGGTGCCATCTTAACCATCCAAGAGAGCAGGGGATTACCCGATGAGATAACTGTGGAAATTAAGGCACTTCATCACAAGTTCAGATGGCTCAGCAATTAATTCAGGTAATGAATTATATAACTTAGTGGTCAAGAGCTTGAAAAAAAAACAACCAATATATTATGTTATAAGCTTGGTATAGTTGTATCACAATGTTGTATTACTTAAAATATATTATGCTCTAAATGTTTTGATTTTAACGTAAACGAATTGAATGCATAACATGAGCGAGTGTATTTATCAAAATTTTAATCGTTTTACAGTGTAATTCCATGTTTTCATATTTCAAACTTGAAAGTTAAAAACATTGAATTAGTAGAAATGTTGTTTTCATTATTTTCACTTAGATAATAAAATCCGAACATAGTCCTTATGGTTGGGTTATATTTAGTTTGTGTTTGAAGTGTAGATTATTTTGGTTTGGGTTATAATAGTATGTATTTGAGATGTAGACTATTTTAGTTTTGAGAAGAAAGCAAATAATAAAAATATGATGTATGTAAAATAGTAGAAACTGTAGCAAATGGGGGTTTTCAAATAGTATCGACTGTAGTTAATTGGTCCAGACTACAAAATAGTATTTACTGTAGCAAACATGTGATTATTATAGTTTTAGATAGTCTTTGTTCCAAAGGACAAACCCTTAGGGTTGTAAACTATTTTGTTTGTATTATAAGGAGGGTTTGTAAATGATCCTAAGGCTAGTAAAATATAGAAAAGATGTCATAAGACATTTTTTTCCTTCTTTTCTATCTATTCAGGTTCAAATACCTATTTTAAGATAGAAAAGGATTTTAATTCTGATTCCCGCATCAAGAACAAGATCTCAACTTTAAATATGCATCTGTTGATGAGCAAAATTTAGGGTAATGTTTACATATTTATAATTCTTGTTTTTTTCCCATATAGGAAGCAGTAAATGCACCCAAGGAACCAGTAACAAGCAGCAGCTATGGAAGGCTGGACACAACAGGATTAAGGTCATCTTACTCCCAGTTGGCTGCTTCAGGTTCATCCTATACTTCATCTTCTTTATCTTCACAATCATATGGTGGATATGGGTCTTCTGGTTTAGGAGGCTACACTACCTTCAGGCTCTGAATTGATTGTTCTGCATAGATCCATATCCACCCGGATTAGTGGATCTGTTTCGGATTCATTAATTCTTGCTAAAGAGAATGAATGAATTATGTTGGAATGTAGTTGTTGTAAAGTCAGCCTGAGTTAGTTAAAAACATTCTCTTTTCTTTTCTTTTCTTTTCTTCTTTTTAACCCTCTTTGGCATATCTAAACTCATTCAGCTGGGTAGATTTGTCTTATGTTTTTCTTTTTCTTTCAGTGTTAAATGTGTTTGTTTCTTAGGGTTTTTTTTTCTTCCAGAACTGTTTTATTTGGGAGAAACTCAGATTAACTTAAAAATATTGAACAACTGGAATGCATCTTAGAATTATTCTTAAGTTGATAGATTGGTAAATGGAC

mRNA sequence

AAAAAAACAAGAACAACGCAATTGCCAAATTTCCCTTTTTCTCTTCGTTCGTTTTCTTAAAACCTCTGTGAGTCATAACCCTAACTTCTCTCATTCTTCATCTTCCTCCTCGATGGCCACCAACACAACTACAGAGAATGGCTCCACTGATGCTATTGCCAACCCTCAAAGCTCCACACTTCCCTCTCTAGCTGCTGCAGAACCGGACTCTACAGAAGCCGGTGATGATGATTCCGACATCGATCCTTCTAACCAAGACTACTTATCTGTTCCTCCTTCCGATTCTGCAGTTCATGAACCATCCAATCATACCGGCGCTTCCGATAAAAAGTGGCCCGGATGGCCCGGCGACTGCGTCTTCCGCCTTATTGTGCCCGTTGTTAAAGTTGGCAGCATTATTGGGCGCAAGGGGGATCTTATCAAGAAGATGTGTGAAGAAACTAGGGCTAGAATTCGTGTTCTTGATGGTGCTGTTGGCACTCCTGATCGCGTTGTGTTGATATCAGGAAAAGAAGAGCTTGAGTCACCCCTTTCCCCTGCTATGGACGCAGTTATAAGAGTCTTCAAACGTGTGTCTGGATTGTCTGAGAATGAAGATGAAGCTAAAGCCTCATTTTGTTCAATTCGGCTACTGGTGGCATCAACTCAAGCAATCAATCTAATTGGAAAACAGGGTTCATTAATCAAATCTATACAGGAGAGTACAGGGGCCTCTGTAAGAGTATTATCGGGAGATGAGATGCCATTCTATGCTGGTGCAGACGAGAGAATGGTGGAATTGCAGGGAGAATCCTTAAAGGTTCTCAAGGCTCTAGAGGGAGTAGTGGGCCACCTAAGGAAGTTTTTAGTTGATCATAGTGTTCTTCCTCTGTTTGAAAAGAGTTTTAATACACCTGCCTCACAAGATCGCCAAACGGAAACCTGGACTGACAAGTCCTCACTTCTTACTGCATCTCAAAGCTTAATCTCTTCCGAGTATCCTCCGTCTACAAAAAGAGAATCTCTATTTCTTGATCGTGAAACTCATCTTGATTCTCATATTCCATCATCTGGTATTTCTCTATATGGGCAAGATCGAGTGCTTCCTACTATTCGATCATCAGGTGTTGGCCGGTCTGGGGGACCTATTGTAACTCAGGTTACTCAGACAATGCAGATCCCGTTATCTTATGCTGAGGATATCATTGGGGTTGGAGGAACAAATATTGCATTCATCCGTCGTAATAGTGGTGCCATCTTAACCATCCAAGAGAGCAGGGGATTACCCGATGAGATAACTGTGGAAATTAAGGCACTTCATCACAAGTTCAGATGGCTCAGCAATTAATTCAGGAAGCAGTAAATGCACCCAAGGAACCAGTAACAAGCAGCAGCTATGGAAGGCTGGACACAACAGGATTAAGGTCATCTTACTCCCAGTTGGCTGCTTCAGGTTCATCCTATACTTCATCTTCTTTATCTTCACAATCATATGGTGGATATGGGTCTTCTGGTTTAGGAGGCTACACTACCTTCAGGCTCTGAATTGATTGTTCTGCATAGATCCATATCCACCCGGATTAGTGGATCTGTTTCGGATTCATTAATTCTTGCTAAAGAGAATGAATGAATTATGTTGGAATGTAGTTGTTGTAAAGTCAGCCTGAGTTAGTTAAAAACATTCTCTTTTCTTTTCTTTTCTTTTCTTCTTTTTAACCCTCTTTGGCATATCTAAACTCATTCAGCTGGGTAGATTTGTCTTATGTTTTTCTTTTTCTTTCAGTGTTAAATGTGTTTGTTTCTTAGGGTTTTTTTTTCTTCCAGAACTGTTTTATTTGGGAGAAACTCAGATTAACTTAAAAATATTGAACAACTGGAATGCATCTTAGAATTATTCTTAAGTTGATAGATTGGTAAATGGAC

Coding sequence (CDS)

ATGGCCACCAACACAACTACAGAGAATGGCTCCACTGATGCTATTGCCAACCCTCAAAGCTCCACACTTCCCTCTCTAGCTGCTGCAGAACCGGACTCTACAGAAGCCGGTGATGATGATTCCGACATCGATCCTTCTAACCAAGACTACTTATCTGTTCCTCCTTCCGATTCTGCAGTTCATGAACCATCCAATCATACCGGCGCTTCCGATAAAAAGTGGCCCGGATGGCCCGGCGACTGCGTCTTCCGCCTTATTGTGCCCGTTGTTAAAGTTGGCAGCATTATTGGGCGCAAGGGGGATCTTATCAAGAAGATGTGTGAAGAAACTAGGGCTAGAATTCGTGTTCTTGATGGTGCTGTTGGCACTCCTGATCGCGTTGTGTTGATATCAGGAAAAGAAGAGCTTGAGTCACCCCTTTCCCCTGCTATGGACGCAGTTATAAGAGTCTTCAAACGTGTGTCTGGATTGTCTGAGAATGAAGATGAAGCTAAAGCCTCATTTTGTTCAATTCGGCTACTGGTGGCATCAACTCAAGCAATCAATCTAATTGGAAAACAGGGTTCATTAATCAAATCTATACAGGAGAGTACAGGGGCCTCTGTAAGAGTATTATCGGGAGATGAGATGCCATTCTATGCTGGTGCAGACGAGAGAATGGTGGAATTGCAGGGAGAATCCTTAAAGGTTCTCAAGGCTCTAGAGGGAGTAGTGGGCCACCTAAGGAAGTTTTTAGTTGATCATAGTGTTCTTCCTCTGTTTGAAAAGAGTTTTAATACACCTGCCTCACAAGATCGCCAAACGGAAACCTGGACTGACAAGTCCTCACTTCTTACTGCATCTCAAAGCTTAATCTCTTCCGAGTATCCTCCGTCTACAAAAAGAGAATCTCTATTTCTTGATCGTGAAACTCATCTTGATTCTCATATTCCATCATCTGGTATTTCTCTATATGGGCAAGATCGAGTGCTTCCTACTATTCGATCATCAGGTGTTGGCCGGTCTGGGGGACCTATTGTAACTCAGGTTACTCAGACAATGCAGATCCCGTTATCTTATGCTGAGGATATCATTGGGGTTGGAGGAACAAATATTGCATTCATCCGTCGTAATAGTGGTGCCATCTTAACCATCCAAGAGAGCAGGGGATTACCCGATGAGATAACTGTGGAAATTAAGGCACTTCATCACAAGTTCAGATGGCTCAGCAATTAA

Protein sequence

MATNTTTENGSTDAIANPQSSTLPSLAAAEPDSTEAGDDDSDIDPSNQDYLSVPPSDSAVHEPSNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWTDKSSLLTASQSLISSEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKALHHKFRWLSN

Homology

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BLAST of PI0011516.1 vs. ExPASy Swiss-Prot
Match: Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 3.5e-113
Identity = 229/390 (58.72%), Postives = 285/390 (73.08%), Query Frame = 0


Query: 13  DAIANPQSSTLPSLAAAEPDSTEAG---DDDSDIDPSNQDYLSVPPSDSAVHEPSNHTG- 72
           D++ N  S  LP      P    A    D++S   P     L+ P S +A       T  
Sbjct: 6   DSVENNGSINLPENENLIPAGFSAAALLDENSGAFPE----LNQPDSLAAAETTFPDTND 65

Query: 73  ASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVV 132
           +++++WPGWPGDCVFR+IVPV KVG+IIGRKGD IKKMCEETRARI+VLDG V TPDR+V
Sbjct: 66  SAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIV 125

Query: 133 LISGKEELESPLSPAMDAVIRVFKRVSGLSENEDE----AKASFCSIRLLVASTQAINLI 192
           LISGKEE E+ +SPAMDAV+RVF+RVSGL +N+D+    A + F S+RLLVASTQAINLI
Sbjct: 126 LISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLI 185

Query: 193 GKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKF 252
           GKQGSLIKSI E++GASVR+LS +E PFYA  DER+V+LQGE+LK+LKALE +VGHLR+F
Sbjct: 186 GKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRF 245

Query: 253 LVDHSVLPLFEKSFNTPASQDRQTETWTD-KSSLLTASQSLISSEYPPSTKRESLFLDRE 312
           LVDH+V+PLFEK +    SQ RQ E   + KSSL T S +L+  ++    +RE LFL+R+
Sbjct: 246 LVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNLMEPDFSLLARREPLFLERD 305

Query: 313 THLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGT 372
           + +DS +  SG+S+Y QD VL    S G+ R     VTQV+QTMQIP SYAEDIIGV G 
Sbjct: 306 SRVDSRVQPSGVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFSYAEDIIGVEGA 365

Query: 373 NIAFIRRNSGAILTIQESRGLPDEITVEIK 394
           NIA+IRR SGA +TI+ES   PD+ITVEIK
Sbjct: 366 NIAYIRRRSGATITIKESPH-PDQITVEIK 390

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BLAST of PI0011516.1 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.0e-68
Identity = 161/376 (42.82%), Postives = 222/376 (59.04%), Query Frame = 0


Query: 32  DSTEAGDDDSDIDPSNQDYL--SVPPSDSAVHEPSNHTGASDKKWPGWPGDCVFRLIVPV 91
           D  +   +D +  P + + L  S P  D+ V       G  +K+WPGWPG+ VFR++VP 
Sbjct: 143 DEVQDKVEDEEGIPEHLESLQKSEPEEDATV-------GGEEKRWPGWPGETVFRMLVPA 202

Query: 92  VKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLSPAMDAVIR 151
            KVGSIIGRKGD+IKK+ EETRARI++LDG  GT +R V++SGKEE ES L P+MD ++R
Sbjct: 203 QKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLR 262

Query: 152 VFKR-VSGLSENEDEA-KASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSG 211
           V  R V GL     +A   S  S RLLV ++QA +LIGKQG  +K+IQE++   VRVL  
Sbjct: 263 VHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGS 322

Query: 212 DEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPASQ-DR 271
           +++P +A  D+R+VE+ GE   V +ALE +  HLRKFLVD S++P FE     P  Q D 
Sbjct: 323 EDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDRSIIPFFENQMQKPTRQMDH 382

Query: 272 QTETWTDKSSLLTASQSLISSEY--------PPSTKRESLFLDRETHLD--SHIPSSGIS 331
                         + S+    Y         P  + +S +   E         P  GIS
Sbjct: 383 MPPPHQSWGPPQGHAPSVGGGGYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGIS 442

Query: 332 LYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAIL 391
            YG++  +    +  V  +   +  QVTQ MQIPLSYA+ +IG  G+NI++ RR SGA +
Sbjct: 443 AYGREPPM----NVHVSSAPPMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATV 502

Query: 392 TIQESRGLPDEITVEI 393
           TIQE+RG+P E+TVE+
Sbjct: 503 TIQETRGVPGEMTVEV 507

[Close]

BLAST of PI0011516.1 vs. ExPASy Swiss-Prot
Match: F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.7e-17
Identity = 58/180 (32.22%), Postives = 96/180 (53.33%), Query Frame = 0


Query: 79  GDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLI-------- 138
           G   FRL+ P+  VG++IG+ G++IK++ + T A+IRV +   G+PDRV+ I        
Sbjct: 45  GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKS 104

Query: 139 -------------SGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 198
                          K+E E  +S A  A+I+VF+ ++       EA +     RLL  S
Sbjct: 105 RVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAA------EADSDTVVCRLLTES 164

Query: 199 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 238
           + A  +IGK G ++ SI++ TG  + +   + +P  A  D+ MVE++G ++ V KAL  +
Sbjct: 165 SHAGAVIGKGGQMVGSIRKETGCKISIRI-ENLPICADTDDEMVEVEGNAIAVKKALVSI 217

[Close]

BLAST of PI0011516.1 vs. ExPASy Swiss-Prot
Match: P57722 (Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3)

HSP 1 Score: 87.4 bits (215), Expect = 4.0e-16
Identity = 97/337 (28.78%), Postives = 147/337 (43.62%), Query Frame = 0


Query: 61  HEPSNHTGA---SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           H P  H G    S     G       RL++   +VGSIIG+KG+ +KKM EE+ ARI + 
Sbjct: 23  HHPELHFGGKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS 82

Query: 121 DGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSE--------NEDEAKASFC 180
           +G    P+R+V I+G            DA+ + F  ++   E        N         
Sbjct: 83  EG--NCPERIVTITG----------PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 142

Query: 181 SIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLK 240
           ++RL+V ++Q  +LIGK GS IK I+ESTGA V+V +GD +P    + ER V + G    
Sbjct: 143 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLP---NSTERAVTISGTPDA 202

Query: 241 VLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPA------SQDRQTETWTDKSSLLTASQS 300
           +++ ++ +   + +     + +P   K  +TP       +   Q +        LT    
Sbjct: 203 IIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQ 262

Query: 301 LISSE--YPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVT 360
           L   +  +PP  +    F   +  L  H      +L GQ        SSG+  S      
Sbjct: 263 LAMQQTPFPPLGQTNPAFPGEK--LPLHSSEEAQNLMGQ--------SSGLDAS----PP 322

Query: 361 QVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTI 379
             T  + IP      IIG  GT I  IR+ SGA + I
Sbjct: 323 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 329

[Close]

BLAST of PI0011516.1 vs. ExPASy Swiss-Prot
Match: P57721 (Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=1 SV=2)

HSP 1 Score: 85.9 bits (211), Expect = 1.2e-15
Identity = 91/311 (29.26%), Postives = 141/311 (45.34%), Query Frame = 0


Query: 84  RLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLSPA 143
           RL++   +VGSIIG+KG+ +KKM EE+ ARI + +G    P+R+V I+G           
Sbjct: 49  RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG----------P 108

Query: 144 MDAVIRVFKRVSGLSE--------NEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQ 203
            DA+ + F  ++   E        N         ++RL+V ++Q  +LIGK GS IK I+
Sbjct: 109 TDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIR 168

Query: 204 ESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFE 263
           ESTGA V+V +GD +P    + ER V + G    +++ ++ +   + +     + +P   
Sbjct: 169 ESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRP 228

Query: 264 KSFNTPA------SQDRQTETWTDKSSLLTASQSLISSE--YPPSTKRESLFLDRETHLD 323
           K  +TP       +   Q +        LT    L   +  +PP  +    F   +  L 
Sbjct: 229 KPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEK--LP 288

Query: 324 SHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAF 379
            H      +L GQ        SSG+  S        T  + IP      IIG  GT I  
Sbjct: 289 LHSSEEAQNLMGQ--------SSGLDAS----PPASTHELTIPNDLIGCIIGRQGTKINE 329

[Close]

BLAST of PI0011516.1 vs. ExPASy TrEMBL
Match: A0A5D3BVI2 (RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001920 PE=4 SV=1)

HSP 1 Score: 733.0 bits (1891), Expect = 6.6e-208
Identity = 380/393 (96.69%), Postives = 386/393 (98.22%), Query Frame = 0


Query: 1   MATNTTTENGSTDAIANPQSSTLPSLAAAEPDSTEAGDDDSDIDPSNQDYLSVPPSDSAV 60
           MATNTTT+NGSTDAIANPQSSTLPSLAAAE DSTE GDDDSDIDPSNQDY S+PPSDSA 
Sbjct: 1   MATNTTTDNGSTDAIANPQSSTLPSLAAAEADSTEVGDDDSDIDPSNQDYSSLPPSDSAA 60

Query: 61  HEPSNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120
           HEPS+HTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA
Sbjct: 61  HEPSSHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120

Query: 121 VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 180
           VGTPDRVVLISGKEEL+SPLSPAMDAVIRVFKRVSGLSENEDEAKASF SIRLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEELDSPLSPAMDAVIRVFKRVSGLSENEDEAKASFSSIRLLVASTQA 180

Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240
           INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240

Query: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWTDKSSLLTASQSLISSEYPPSTKRESLFL 300
           LRKFLVDHSVLPLFEKSFNTPASQDRQTETW DKSSLLTASQS+IS+EYPPSTKRESLFL
Sbjct: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFL 300

Query: 301 DRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV 360
           DRETHLDSHI SSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV
Sbjct: 301 DRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV 360

Query: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIK 394
           GGTNIAFIRRNSGAILTIQESRGLPDEITVEIK
Sbjct: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIK 393

[Close]

BLAST of PI0011516.1 vs. ExPASy TrEMBL
Match: A0A0A0LMH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G061550 PE=4 SV=1)

HSP 1 Score: 731.5 bits (1887), Expect = 1.9e-207
Identity = 380/393 (96.69%), Postives = 382/393 (97.20%), Query Frame = 0


Query: 1   MATNTTTENGSTDAIANPQSSTLPSLAAAEPDSTEAGDDDSDIDPSNQDYLSVPPSDSAV 60
           MATNTTTENGSTDAI NP SSTLPSLAAAEPDSTEAGDDDSD DPSNQDY SVPPSDSA 
Sbjct: 1   MATNTTTENGSTDAIPNPLSSTLPSLAAAEPDSTEAGDDDSDSDPSNQDYSSVPPSDSAA 60

Query: 61  HEPSNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120
           HEPSNHTG SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA
Sbjct: 61  HEPSNHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120

Query: 121 VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 180
           VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 180

Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240
           INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240

Query: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWTDKSSLLTASQSLISSEYPPSTKRESLFL 300
           LRKFLVDHSVLPLFEKSFNTPASQDRQTETW DKSSLLTASQS+IS+EY PSTKRESLFL
Sbjct: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYAPSTKRESLFL 300

Query: 301 DRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV 360
           DRE H DSHI SSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV
Sbjct: 301 DREAHFDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV 360

Query: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIK 394
           GGTNIAFIRRNSGAILTIQESRGLPDEITVEIK
Sbjct: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIK 393

[Close]

BLAST of PI0011516.1 vs. ExPASy TrEMBL
Match: A0A1S4E0X0 (RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo OX=3656 GN=LOC103492560 PE=4 SV=1)

HSP 1 Score: 713.0 bits (1839), Expect = 7.1e-202
Identity = 373/397 (93.95%), Postives = 381/397 (95.97%), Query Frame = 0


Query: 1   MATNTTTENGSTDAIANPQSSTLPSLAAAEPDSTEAGDDDSDIDPSNQDYLSVPPSDSAV 60
           MATNTTT+NGSTDAIANPQSSTLPSLAAAE DSTE GDDDSDIDPSNQDY S+PPSDSA 
Sbjct: 1   MATNTTTDNGSTDAIANPQSSTLPSLAAAEADSTEVGDDDSDIDPSNQDYSSLPPSDSAA 60

Query: 61  HEPSNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120
           HEPS+HTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA
Sbjct: 61  HEPSSHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120

Query: 121 VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 180
           VGTPDRVVLISGKEEL+SPLSPAMDAVIRVFKRVSGLSENEDEAKASF SIRLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEELDSPLSPAMDAVIRVFKRVSGLSENEDEAKASFSSIRLLVASTQA 180

Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240
           INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240

Query: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWTDKSSLLTASQSLISSEYPPSTKRESLFL 300
           LRKFLVDHSVLPLFEKSFNTPASQDRQTETW DKSSLLTASQS+IS+EYPPSTKRESLFL
Sbjct: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFL 300

Query: 301 DRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRS----GGPIVTQVTQTMQIPLSYAED 360
           DRETHLDSHI SSGISLYGQDRVLPTIRSSGVGRS       ++  VTQTMQIPLSYAED
Sbjct: 301 DRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSXXXXXXXLIYSVTQTMQIPLSYAED 360

Query: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIK 394
           IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIK
Sbjct: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIK 397

[Close]

BLAST of PI0011516.1 vs. ExPASy TrEMBL
Match: A0A6J1D9V1 (RNA-binding KH domain-containing protein PEPPER OS=Momordica charantia OX=3673 GN=LOC111018213 PE=4 SV=1)

HSP 1 Score: 671.8 bits (1732), Expect = 1.8e-189
Identity = 353/396 (89.14%), Postives = 367/396 (92.68%), Query Frame = 0


Query: 1   MATNTTTENGSTDAIA---NPQSSTLPSLAAAEPDSTEAGDDDSDIDPSNQDYLSVPPSD 60
           MATN   ENGSTDA A   NPQSSTL S+AAAE DSTEAG  +SD+DPSN DYLSVP SD
Sbjct: 1   MATNKIAENGSTDASAINSNPQSSTLDSVAAAELDSTEAGGAESDLDPSNSDYLSVPASD 60

Query: 61  SAVHEPSNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           S   E SNHTG+SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEET+ARIRVL
Sbjct: 61  SGAQEASNHTGSSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEE E+PLSPAMDAVIRVFKRVSG SENED+ KASFCSIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDTKASFCSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALE V
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEAV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWTDKSSLLTASQSLISSEYPPSTKRES 300
           VGHLRKFLVDHSVLPLFEKSFNT ASQDRQT+TW DKSSL TASQS+IS+EYPP+TKRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPPATKRES 300

Query: 301 LFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360
           LF DRE+HLDSH+ SSGISLYGQDR+LP IRSSGV RSG PIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFHDRESHLDSHMASSGISLYGQDRILPGIRSSGVARSGAPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIK 394
           IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIK
Sbjct: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIK 396

[Close]

BLAST of PI0011516.1 vs. ExPASy TrEMBL
Match: A0A6J1K7W7 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661 GN=LOC111491969 PE=4 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 4.5e-188
Identity = 353/397 (88.92%), Postives = 368/397 (92.70%), Query Frame = 0


Query: 1   MATNTTTENGSTDAIA---NPQSSTLPSLAAAEPDSTEAGDDDSDIDPSNQDYLSVPPSD 60
           MATNT T+NGSTDA A   NP+SS L S+AAAEPDS EAG  +SD+DPSNQDYLS P SD
Sbjct: 1   MATNTATDNGSTDANALNFNPESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAPASD 60

Query: 61  SAVHEPS-NHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120
           SA H+ S NHT ASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV
Sbjct: 61  SADHDESPNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120

Query: 121 LDGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVA 180
           LDGAVGTPDRVVLISGKE+ E+PLSPAMDAVIRVFKRV   SENEDEAK SFCSIRLLVA
Sbjct: 121 LDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTSFCSIRLLVA 180

Query: 181 STQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEG 240
           STQAINLIGKQGSLIKSIQESTGAS+RVLSGDEMPFYAGADERMVELQGESLKVLKALE 
Sbjct: 181 STQAINLIGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQGESLKVLKALEA 240

Query: 241 VVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWTDKSSLLTASQSLISSEYPPSTKRE 300
           VVGHLRKFLVD SVLPLFEKSFNTP SQDRQ + W DKSSLLTASQS+IS+EYP STKRE
Sbjct: 241 VVGHLRKFLVDRSVLPLFEKSFNTPPSQDRQMDAWADKSSLLTASQSVISAEYPSSTKRE 300

Query: 301 SLFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED 360
           SL+LDRE +LDS+IPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED
Sbjct: 301 SLYLDREAYLDSYIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED 360

Query: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIK 394
           IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIK
Sbjct: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIK 397

[Close]

BLAST of PI0011516.1 vs. NCBI nr
Match: TYK03085.1 (RNA-binding KH domain-containing protein PEPPER [Cucumis melo var. makuwa])

HSP 1 Score: 733.0 bits (1891), Expect = 1.4e-207
Identity = 380/393 (96.69%), Postives = 386/393 (98.22%), Query Frame = 0


Query: 1   MATNTTTENGSTDAIANPQSSTLPSLAAAEPDSTEAGDDDSDIDPSNQDYLSVPPSDSAV 60
           MATNTTT+NGSTDAIANPQSSTLPSLAAAE DSTE GDDDSDIDPSNQDY S+PPSDSA 
Sbjct: 1   MATNTTTDNGSTDAIANPQSSTLPSLAAAEADSTEVGDDDSDIDPSNQDYSSLPPSDSAA 60

Query: 61  HEPSNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120
           HEPS+HTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA
Sbjct: 61  HEPSSHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120

Query: 121 VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 180
           VGTPDRVVLISGKEEL+SPLSPAMDAVIRVFKRVSGLSENEDEAKASF SIRLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEELDSPLSPAMDAVIRVFKRVSGLSENEDEAKASFSSIRLLVASTQA 180

Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240
           INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240

Query: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWTDKSSLLTASQSLISSEYPPSTKRESLFL 300
           LRKFLVDHSVLPLFEKSFNTPASQDRQTETW DKSSLLTASQS+IS+EYPPSTKRESLFL
Sbjct: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFL 300

Query: 301 DRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV 360
           DRETHLDSHI SSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV
Sbjct: 301 DRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV 360

Query: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIK 394
           GGTNIAFIRRNSGAILTIQESRGLPDEITVEIK
Sbjct: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIK 393

[Close]

BLAST of PI0011516.1 vs. NCBI nr
Match: XP_031736379.1 (RNA-binding KH domain-containing protein PEPPER isoform X2 [Cucumis sativus])

HSP 1 Score: 731.5 bits (1887), Expect = 4.0e-207
Identity = 380/393 (96.69%), Postives = 382/393 (97.20%), Query Frame = 0


Query: 1   MATNTTTENGSTDAIANPQSSTLPSLAAAEPDSTEAGDDDSDIDPSNQDYLSVPPSDSAV 60
           MATNTTTENGSTDAI NP SSTLPSLAAAEPDSTEAGDDDSD DPSNQDY SVPPSDSA 
Sbjct: 1   MATNTTTENGSTDAIPNPLSSTLPSLAAAEPDSTEAGDDDSDSDPSNQDYSSVPPSDSAA 60

Query: 61  HEPSNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120
           HEPSNHTG SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA
Sbjct: 61  HEPSNHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120

Query: 121 VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 180
           VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 180

Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240
           INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240

Query: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWTDKSSLLTASQSLISSEYPPSTKRESLFL 300
           LRKFLVDHSVLPLFEKSFNTPASQDRQTETW DKSSLLTASQS+IS+EY PSTKRESLFL
Sbjct: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYAPSTKRESLFL 300

Query: 301 DRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV 360
           DRE H DSHI SSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV
Sbjct: 301 DREAHFDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV 360

Query: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIK 394
           GGTNIAFIRRNSGAILTIQESRGLPDEITVEIK
Sbjct: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIK 393

[Close]

BLAST of PI0011516.1 vs. NCBI nr
Match: XP_004149510.2 (RNA-binding KH domain-containing protein PEPPER isoform X1 [Cucumis sativus] >KGN61176.1 hypothetical protein Csa_021288 [Cucumis sativus])

HSP 1 Score: 731.5 bits (1887), Expect = 4.0e-207
Identity = 380/393 (96.69%), Postives = 382/393 (97.20%), Query Frame = 0


Query: 1   MATNTTTENGSTDAIANPQSSTLPSLAAAEPDSTEAGDDDSDIDPSNQDYLSVPPSDSAV 60
           MATNTTTENGSTDAI NP SSTLPSLAAAEPDSTEAGDDDSD DPSNQDY SVPPSDSA 
Sbjct: 1   MATNTTTENGSTDAIPNPLSSTLPSLAAAEPDSTEAGDDDSDSDPSNQDYSSVPPSDSAA 60

Query: 61  HEPSNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120
           HEPSNHTG SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA
Sbjct: 61  HEPSNHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120

Query: 121 VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 180
           VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 180

Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240
           INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240

Query: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWTDKSSLLTASQSLISSEYPPSTKRESLFL 300
           LRKFLVDHSVLPLFEKSFNTPASQDRQTETW DKSSLLTASQS+IS+EY PSTKRESLFL
Sbjct: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYAPSTKRESLFL 300

Query: 301 DRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV 360
           DRE H DSHI SSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV
Sbjct: 301 DREAHFDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV 360

Query: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIK 394
           GGTNIAFIRRNSGAILTIQESRGLPDEITVEIK
Sbjct: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIK 393

[Close]

BLAST of PI0011516.1 vs. NCBI nr
Match: XP_038890982.1 (RNA-binding KH domain-containing protein PEPPER-like [Benincasa hispida])

HSP 1 Score: 714.1 bits (1842), Expect = 6.6e-202
Identity = 374/396 (94.44%), Postives = 382/396 (96.46%), Query Frame = 0


Query: 1   MATNTTTENGSTDAIA---NPQSSTLPSLAAAEPDSTEAGDDDSDIDPSNQDYLSVPPSD 60
           MAT TTTENGSTDA A   NPQSSTL SLAAAEPDSTEAG  +SDIDPSN+DYLSVP SD
Sbjct: 1   MATTTTTENGSTDANALNSNPQSSTLSSLAAAEPDSTEAGGTESDIDPSNEDYLSVPASD 60

Query: 61  SAVHEPSNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           SA +E  NHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL
Sbjct: 61  SAAYEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEL++PLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEELDAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWTDKSSLLTASQSLISSEYPPSTKRES 300
           VGHLRKFLVDHSVLPLFEKSFNTPASQDRQ +TW DKSSLLTASQS+IS+EYPPSTKRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQMDTWADKSSLLTASQSIISTEYPPSTKRES 300

Query: 301 LFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360
           LFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIK 394
           IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIK
Sbjct: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIK 396

[Close]

BLAST of PI0011516.1 vs. NCBI nr
Match: XP_016901887.1 (PREDICTED: RNA-binding KH domain-containing protein PEPPER [Cucumis melo])

HSP 1 Score: 713.0 bits (1839), Expect = 1.5e-201
Identity = 373/397 (93.95%), Postives = 381/397 (95.97%), Query Frame = 0


Query: 1   MATNTTTENGSTDAIANPQSSTLPSLAAAEPDSTEAGDDDSDIDPSNQDYLSVPPSDSAV 60
           MATNTTT+NGSTDAIANPQSSTLPSLAAAE DSTE GDDDSDIDPSNQDY S+PPSDSA 
Sbjct: 1   MATNTTTDNGSTDAIANPQSSTLPSLAAAEADSTEVGDDDSDIDPSNQDYSSLPPSDSAA 60

Query: 61  HEPSNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120
           HEPS+HTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA
Sbjct: 61  HEPSSHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120

Query: 121 VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 180
           VGTPDRVVLISGKEEL+SPLSPAMDAVIRVFKRVSGLSENEDEAKASF SIRLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEELDSPLSPAMDAVIRVFKRVSGLSENEDEAKASFSSIRLLVASTQA 180

Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240
           INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240

Query: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWTDKSSLLTASQSLISSEYPPSTKRESLFL 300
           LRKFLVDHSVLPLFEKSFNTPASQDRQTETW DKSSLLTASQS+IS+EYPPSTKRESLFL
Sbjct: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFL 300

Query: 301 DRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRS----GGPIVTQVTQTMQIPLSYAED 360
           DRETHLDSHI SSGISLYGQDRVLPTIRSSGVGRS       ++  VTQTMQIPLSYAED
Sbjct: 301 DRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSXXXXXXXLIYSVTQTMQIPLSYAED 360

Query: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIK 394
           IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIK
Sbjct: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIK 397

[Close]

BLAST of PI0011516.1 vs. TAIR 10
Match: AT4G26000.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 409.8 bits (1052), Expect = 2.5e-114
Identity = 229/390 (58.72%), Postives = 285/390 (73.08%), Query Frame = 0


Query: 13  DAIANPQSSTLPSLAAAEPDSTEAG---DDDSDIDPSNQDYLSVPPSDSAVHEPSNHTG- 72
           D++ N  S  LP      P    A    D++S   P     L+ P S +A       T  
Sbjct: 6   DSVENNGSINLPENENLIPAGFSAAALLDENSGAFPE----LNQPDSLAAAETTFPDTND 65

Query: 73  ASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVV 132
           +++++WPGWPGDCVFR+IVPV KVG+IIGRKGD IKKMCEETRARI+VLDG V TPDR+V
Sbjct: 66  SAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIV 125

Query: 133 LISGKEELESPLSPAMDAVIRVFKRVSGLSENEDE----AKASFCSIRLLVASTQAINLI 192
           LISGKEE E+ +SPAMDAV+RVF+RVSGL +N+D+    A + F S+RLLVASTQAINLI
Sbjct: 126 LISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLI 185

Query: 193 GKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKF 252
           GKQGSLIKSI E++GASVR+LS +E PFYA  DER+V+LQGE+LK+LKALE +VGHLR+F
Sbjct: 186 GKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRF 245

Query: 253 LVDHSVLPLFEKSFNTPASQDRQTETWTD-KSSLLTASQSLISSEYPPSTKRESLFLDRE 312
           LVDH+V+PLFEK +    SQ RQ E   + KSSL T S +L+  ++    +RE LFL+R+
Sbjct: 246 LVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNLMEPDFSLLARREPLFLERD 305

Query: 313 THLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGT 372
           + +DS +  SG+S+Y QD VL    S G+ R     VTQV+QTMQIP SYAEDIIGV G 
Sbjct: 306 SRVDSRVQPSGVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFSYAEDIIGVEGA 365

Query: 373 NIAFIRRNSGAILTIQESRGLPDEITVEIK 394
           NIA+IRR SGA +TI+ES   PD+ITVEIK
Sbjct: 366 NIAYIRRRSGATITIKESPH-PDQITVEIK 390

[Close]

BLAST of PI0011516.1 vs. TAIR 10
Match: AT3G04610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 261.2 bits (666), Expect = 1.4e-69
Identity = 161/376 (42.82%), Postives = 222/376 (59.04%), Query Frame = 0


Query: 32  DSTEAGDDDSDIDPSNQDYL--SVPPSDSAVHEPSNHTGASDKKWPGWPGDCVFRLIVPV 91
           D  +   +D +  P + + L  S P  D+ V       G  +K+WPGWPG+ VFR++VP 
Sbjct: 143 DEVQDKVEDEEGIPEHLESLQKSEPEEDATV-------GGEEKRWPGWPGETVFRMLVPA 202

Query: 92  VKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLSPAMDAVIR 151
            KVGSIIGRKGD+IKK+ EETRARI++LDG  GT +R V++SGKEE ES L P+MD ++R
Sbjct: 203 QKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLR 262

Query: 152 VFKR-VSGLSENEDEA-KASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSG 211
           V  R V GL     +A   S  S RLLV ++QA +LIGKQG  +K+IQE++   VRVL  
Sbjct: 263 VHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGS 322

Query: 212 DEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPASQ-DR 271
           +++P +A  D+R+VE+ GE   V +ALE +  HLRKFLVD S++P FE     P  Q D 
Sbjct: 323 EDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDRSIIPFFENQMQKPTRQMDH 382

Query: 272 QTETWTDKSSLLTASQSLISSEY--------PPSTKRESLFLDRETHLD--SHIPSSGIS 331
                         + S+    Y         P  + +S +   E         P  GIS
Sbjct: 383 MPPPHQSWGPPQGHAPSVGGGGYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGIS 442

Query: 332 LYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAIL 391
            YG++  +    +  V  +   +  QVTQ MQIPLSYA+ +IG  G+NI++ RR SGA +
Sbjct: 443 AYGREPPM----NVHVSSAPPMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATV 502

Query: 392 TIQESRGLPDEITVEI 393
           TIQE+RG+P E+TVE+
Sbjct: 503 TIQETRGVPGEMTVEV 507

[Close]

BLAST of PI0011516.1 vs. TAIR 10
Match: AT1G51580.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 97.4 bits (241), Expect = 2.7e-20
Identity = 85/319 (26.65%), Postives = 142/319 (44.51%), Query Frame = 0


Query: 80  DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESP 139
           +  FRL+ P  KVGS+IG+ G +++ +  E+ A I+V D    + +R+++IS +E LE  
Sbjct: 275 EVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERR 334

Query: 140 LSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTG 199
            S A D V+RV  R+  +      A  +    RLLV S     L+GK G LI  ++ +TG
Sbjct: 335 HSLAQDGVMRVHNRIVEIGFEPSAAVVA----RLLVHSPYIGRLLGKGGHLISEMRRATG 394

Query: 200 ASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSV--------L 259
           AS+RV + D+   Y    + +V++ G    V  AL  ++  LR+ +    +         
Sbjct: 395 ASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAMFPGRLPFQGMGGPP 454

Query: 260 PLFEKSFNTPASQ--DRQTETWTDKSSLLTASQSLISSEYPPSTKRESLFLDRETHLDSH 319
           P F   +  P      RQ     D+               P   +      DR     S 
Sbjct: 455 PPFMGPYPEPPPPFGPRQYPASPDRYHSPVGPFHERHCHGPGFDRPPGPGFDRPPSPMSW 514

Query: 320 IPSSGISLYGQDRVLP------TIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGT 379
            P  GI  +    V P       +R+  +G S  P++T     + IP +Y   + G   +
Sbjct: 515 TPQPGIDGHPGGMVPPDVNHGFALRNEPIG-SENPVMTSANVEIVIPQAYLGHVYGENCS 574

Query: 380 NIAFIRRNSGAILTIQESR 383
           N+ +I++ SGA + + + +
Sbjct: 575 NLNYIKQVSGANVVVHDPK 588

[Close]

BLAST of PI0011516.1 vs. TAIR 10
Match: AT1G14170.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 95.9 bits (237), Expect = 7.9e-20
Identity = 72/222 (32.43%), Postives = 115/222 (51.80%), Query Frame = 0


Query: 44  DPSNQDYLSVPPSDSAVHEP----------SNHTGASDKKWPGWPGDCVFRLIVPVVKVG 103
           +PS   +L +  S S++H+P          S+H   + ++      +     I P   VG
Sbjct: 197 NPSRFQHLLLSSSSSSMHQPGAMLMSAALTSSHRNYAVRRDIADAREFCVCFICPAENVG 256

Query: 104 SIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKR 163
            +IG+ G  I ++ +ET A IRV        D ++ IS KE  E   SPA++A IR+ +R
Sbjct: 257 GVIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ-SPAVNAAIRLQQR 316

Query: 164 VSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFY 223
            S   +   +A     S RLLV+S+Q   LIGK G++I  ++  T A++R+L  +++P  
Sbjct: 317 CS--EKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKI 376

Query: 224 AGADERMVELQGESLKVLKALEGVVGHLR--KFLVDHSVLPL 254
           A  DE MV++ G     +KAL  V+  LR   F +DH ++ L
Sbjct: 377 AREDEEMVQITGSPDAAMKALTQVILRLRANSFDMDHGLVLL 415

[Close]

BLAST of PI0011516.1 vs. TAIR 10
Match: AT1G14170.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 95.9 bits (237), Expect = 7.9e-20
Identity = 72/222 (32.43%), Postives = 115/222 (51.80%), Query Frame = 0


Query: 44  DPSNQDYLSVPPSDSAVHEP----------SNHTGASDKKWPGWPGDCVFRLIVPVVKVG 103
           +PS   +L +  S S++H+P          S+H   + ++      +     I P   VG
Sbjct: 189 NPSRFQHLLLSSSSSSMHQPGAMLMSAALTSSHRNYAVRRDIADAREFCVCFICPAENVG 248

Query: 104 SIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKR 163
            +IG+ G  I ++ +ET A IRV        D ++ IS KE  E   SPA++A IR+ +R
Sbjct: 249 GVIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ-SPAVNAAIRLQQR 308

Query: 164 VSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFY 223
            S   +   +A     S RLLV+S+Q   LIGK G++I  ++  T A++R+L  +++P  
Sbjct: 309 CS--EKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKI 368

Query: 224 AGADERMVELQGESLKVLKALEGVVGHLR--KFLVDHSVLPL 254
           A  DE MV++ G     +KAL  V+  LR   F +DH ++ L
Sbjct: 369 AREDEEMVQITGSPDAAMKALTQVILRLRANSFDMDHGLVLL 407

The following BLAST results are available for this feature:

BLAST of PI0011516.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZH4	3.5e-113	58.72	RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SR13	2.0e-68	42.82	Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV...	[more]
F4KDN0	2.7e-17	32.22	KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S...	[more]
P57722	4.0e-16	28.78	Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3	[more]
P57721	1.2e-15	29.26	Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=1 SV=2	[more]

BLAST of PI0011516.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BVI2	6.6e-208	96.69	RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo var. makuwa OX=1...	[more]
A0A0A0LMH4	1.9e-207	96.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G061550 PE=4 SV=1	[more]
A0A1S4E0X0	7.1e-202	93.95	RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1D9V1	1.8e-189	89.14	RNA-binding KH domain-containing protein PEPPER OS=Momordica charantia OX=3673 G...	[more]
A0A6J1K7W7	4.5e-188	88.92	RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of PI0011516.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK03085.1	1.4e-207	96.69	RNA-binding KH domain-containing protein PEPPER [Cucumis melo var. makuwa]	[more]
XP_031736379.1	4.0e-207	96.69	RNA-binding KH domain-containing protein PEPPER isoform X2 [Cucumis sativus]	[more]
XP_004149510.2	4.0e-207	96.69	RNA-binding KH domain-containing protein PEPPER isoform X1 [Cucumis sativus] >KG...	[more]
XP_038890982.1	6.6e-202	94.44	RNA-binding KH domain-containing protein PEPPER-like [Benincasa hispida]	[more]
XP_016901887.1	1.5e-201	93.95	PREDICTED: RNA-binding KH domain-containing protein PEPPER [Cucumis melo]	[more]

BLAST of PI0011516.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26000.1	2.5e-114	58.72	RNA-binding KH domain-containing protein	[more]
AT3G04610.1	1.4e-69	42.82	RNA-binding KH domain-containing protein	[more]
AT1G51580.1	2.7e-20	26.65	RNA-binding KH domain-containing protein	[more]
AT1G14170.1	7.9e-20	32.43	RNA-binding KH domain-containing protein	[more]
AT1G14170.2	7.9e-20	32.43	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 341..400 e-value: 0.29 score: 20.1 coord: 79..152 e-value: 5.9E-9 score: 45.8 coord: 167..242 e-value: 8.0E-9 score: 45.3
None	No IPR available	GENE3D	3.30.310.210		coord: 80..244 e-value: 8.3E-30 score: 105.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..73
None	No IPR available	PANTHER	PTHR10288:SF277	RNA-BINDING KH DOMAIN-CONTAINING PROTEIN PEPPER	coord: 69..396
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 69..396
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 80..147 score: 13.963161
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 168..237 score: 13.439081
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 342..392 score: 9.833411
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 82..151 e-value: 1.46361E-19 score: 79.8279
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 170..235 e-value: 2.98128E-16 score: 70.5831
None	No IPR available	CDD	cd00105	KH-I	coord: 344..394 e-value: 5.33326E-6 score: 41.7767
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 83..135 e-value: 5.0E-11 score: 42.3 coord: 344..392 e-value: 7.2E-6 score: 25.7 coord: 171..235 e-value: 2.5E-10 score: 40.0
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 334..398 e-value: 1.7E-6 score: 29.6
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 338..393
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 74..135
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 165..248

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0011516	PI0011516	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0011516.1-five_prime_utr	PI0011516.1-five_prime_utr-chr05:6002227..6002338	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0011516.1-exon	PI0011516.1-exon-chr05:6002227..6002719	exon
PI0011516.1-exon	PI0011516.1-exon-chr05:6004131..6004371	exon
PI0011516.1-exon	PI0011516.1-exon-chr05:6008033..6008181	exon
PI0011516.1-exon	PI0011516.1-exon-chr05:6008262..6008516	exon
PI0011516.1-exon	PI0011516.1-exon-chr05:6008894..6009087	exon
PI0011516.1-exon	PI0011516.1-exon-chr05:6009932..6010501	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0011516.1-cds	PI0011516.1-cds-chr05:6002339..6002719	CDS
PI0011516.1-cds	PI0011516.1-cds-chr05:6004131..6004371	CDS
PI0011516.1-cds	PI0011516.1-cds-chr05:6008033..6008181	CDS
PI0011516.1-cds	PI0011516.1-cds-chr05:6008262..6008516	CDS
PI0011516.1-cds	PI0011516.1-cds-chr05:6008894..6009082	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0011516.1-three_prime_utr	PI0011516.1-three_prime_utr-chr05:6009083..6009087	three_prime_UTR
PI0011516.1-three_prime_utr	PI0011516.1-three_prime_utr-chr05:6009932..6010501	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0011516.1	PI0011516.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048467	gynoecium development
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0048579	negative regulation of long-day photoperiodism, flowering
biological_process	GO:0048577	negative regulation of short-day photoperiodism, flowering
biological_process	GO:0010468	regulation of gene expression
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003729	mRNA binding